Psyllid ID: psy16147

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
Protein Sequence
MHQLFKPVSVYFMVLVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEcccccccccccccccEccccHHHEHccccccccccccccccccEccccHHHHHHHHccccccccccccccccccccccEccccHHHHHHHHccccccccccccccccccccccEccccHHHHHHHHHHccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MHQLFKPVSVYFMVLVKLKSRLmmssngtmscaddnsgegqflCDQCDKVFAKHSSLARHKYEHSVLQkcsssynyprhsicnrptasypelsdmgslegdesldrmdedssERKLKSRLmmssngtmscaddnsgegqflCDQCDKVFAKHSSLArhkyehsgqrpykcvecpkafkhkhhltehkrlhsgekpfqcckclkrfshsgsysqhmnhrysyckpyre
Flexible Loop (DISEMBL)
MHQLFKPVSVYFMVLVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLArhkyehsgqrpyKCVECPKAFKHKHHLTehkrlhsgekpFQCCKCLKRfshsgsysqhmnhrysyckpyre
Low Complexity Region (SEG)
MHQLFKPVSVYFMVLVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE
Disordered region (IsUnstruct)
***LFKPVSVYFMVLVKLKSRLM****************GQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRH*I*********************************************************QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSY******RYSY******
Disordered Region (DISOPRED)
MHQLFKPVSVYFMVLVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY**
Disordered Region (DISEMBL)
MHQLFKPVSVYFMVLVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGD***************KSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLA**********PYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE
Disordered Region (DISPRO)
****FKPVSVYFMVLVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCK****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHQLFKPVSVYFMVLVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	227	2.2.26 [Sep-21-2011]
P28166	1054	Zinc finger protein 1 OS=	yes	N/A	0.374	0.080	0.920	3e-46
G5EBU4	596	Zinc finger E-box-binding	yes	N/A	0.400	0.152	0.912	3e-45
Q60542	1043	Zinc finger E-box-binding	N/A	N/A	0.819	0.178	0.413	4e-36
Q64318	1117	Zinc finger E-box-binding	yes	N/A	0.819	0.166	0.409	1e-35
P36197	1114	Zinc finger E-box-binding	yes	N/A	0.325	0.066	0.767	3e-35
P37275	1124	Zinc finger E-box-binding	yes	N/A	0.823	0.166	0.401	3e-35
Q62947	1109	Zinc finger E-box-binding	no	N/A	0.819	0.167	0.406	4e-35
Q9R0G7	1215	Zinc finger E-box-binding	no	N/A	0.321	0.060	0.767	2e-34
O60315	1214	Zinc finger E-box-binding	no	N/A	0.321	0.060	0.767	2e-34
Q86XU0	584	Zinc finger protein 677 O	no	N/A	0.722	0.280	0.320	3e-21

>sp|P28166|ZFH1_DROME Zinc finger protein 1 OS=Drosophila melanogaster GN=zfh1 PE=1 SV=2

 Score =  184 bits (468), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 81/88 (92%), Positives = 85/88 (96%)

Query: 140  FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC 199
            ++CDQCDK FAK SSLARHKYEHSGQRPY+C+ECPKAFKHKHHLTEHKRLHSGEKPFQC 
Sbjct: 967  YVCDQCDKAFAKQSSLARHKYEHSGQRPYQCIECPKAFKHKHHLTEHKRLHSGEKPFQCS 1026

Query: 200  KCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
            KCLKRFSHSGSYSQHMNHRYSYCKPYRE
Sbjct: 1027 KCLKRFSHSGSYSQHMNHRYSYCKPYRE 1054

Involved in the development of the embryonic central nervous system, embryonic mesoderm and adult musculature.
Drosophila melanogaster (taxid: 7227)

>sp|G5EBU4|ZAG1_CAEEL Zinc finger E-box-binding homebox protein zag-1 OS=Caenorhabditis elegans GN=zag-1 PE=2 SV=1

 Score =  181 bits (459), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 83/91 (91%), Positives = 83/91 (91%)

Query: 137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
           EG F CDQCDKVF K SSLARHKYEHSGQRPYKC  C KAFKHKHHLTEHKRLHSGEKPF
Sbjct: 478 EGLFSCDQCDKVFGKQSSLARHKYEHSGQRPYKCDICEKAFKHKHHLTEHKRLHSGEKPF 537

Query: 197 QCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           QC KCLKRFSHSGSYSQHMNHRYSYCKPYRE
Sbjct: 538 QCDKCLKRFSHSGSYSQHMNHRYSYCKPYRE 568

Down-regulates expression of genes involved in either the synthesis or reuptake of serotonin, dopamine and GABA. Acts as a transcriptional repressor to regulate multiple, discrete, neuron-specific aspects of terminal differentiation, including cell migration, axonal development and gene expression. Required for axon guidance. Involved in the proper development of the pharynx. Directly represses its own transcription by interacting with conserved E-box sequence motifs 5'-CACCTG-3' in its own promoter.

Caenorhabditis elegans (taxid: 6239)

>sp|Q60542|ZEB1_MESAU Zinc finger E-box-binding homeobox 1 OS=Mesocricetus auratus GN=ZEB1 PE=2 SV=1

 Score =  151 bits (381), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 119/220 (54%), Gaps = 34/220 (15%)

Query: 7   PVSVYF-MVLVKLKSRLMMSSNGTMSCADDNSGEGQ-FLCDQCDKVFAKHSSLARHKYEH 64
           P+++    V  +L + + ++   ++ C    +   Q  L  Q    +A   S A  +   
Sbjct: 722 PINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYATTVSPAMQEPPV 781

Query: 65  SVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMS 123
            V+Q                P  +  E  D  S EG  ++ D+ D DS+  K K+R    
Sbjct: 782 KVIQ----------------PNGNQDERQDTSS-EGVSTVEDQNDSDSTPPKKKTR---- 820

Query: 124 SNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHL 183
                      +  G + CD CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL
Sbjct: 821 ----------KTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHL 870

Query: 184 TEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCK 223
            EH RLHSGEKP+QC KC KRFSHSGSYSQHMNHRYSYCK
Sbjct: 871 IEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCK 910

Acts as a transcriptional repressor. Binds to E-box sequences in the immunoglobulin heavy chain enhancer as well as in the regulatory regions of many other tissue-specific genes. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1. Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.

Mesocricetus auratus (taxid: 10036)

>sp|Q64318|ZEB1_MOUSE Zinc finger E-box-binding homeobox 1 OS=Mus musculus GN=Zeb1 PE=1 SV=1

 Score =  149 bits (376), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 119/220 (54%), Gaps = 34/220 (15%)

Query: 7   PVSVYF-MVLVKLKSRLMMSSNGTMSCADDNSGEGQ-FLCDQCDKVFAKHSSLARHKYEH 64
           P+++    V  +L + + ++   ++ C    +   Q  L  Q    ++   S A  +   
Sbjct: 777 PINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAVQEPPV 836

Query: 65  SVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMS 123
            V+Q                P  +  E  D  S EG  ++ D+ D DS+  K K+R    
Sbjct: 837 KVIQ----------------PNGNQDERQDTSS-EGVSTVEDQNDSDSTPPKKKTR---- 875

Query: 124 SNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHL 183
                      +  G + CD CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL
Sbjct: 876 ----------KTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKHKHHL 925

Query: 184 TEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCK 223
            EH RLHSGEKP+QC KC KRFSHSGSYSQHMNHRYSYCK
Sbjct: 926 IEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCK 965

Acts as a transcriptional repressor. Binds to E-box sequences in the immunoglobulin heavy chain enhancer as well as in the regulatory regions of many other tissue-specific genes. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1 (By similarity). Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.

Mus musculus (taxid: 10090)

>sp|P36197|ZEB1_CHICK Zinc finger E-box-binding homeobox 1 OS=Gallus gallus GN=ZEB1 PE=2 SV=1

 Score =  148 bits (374), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 66/86 (76%), Positives = 73/86 (84%)

Query: 138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ 197
           G + CD CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+Q
Sbjct: 902 GMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQ 961

Query: 198 CCKCLKRFSHSGSYSQHMNHRYSYCK 223
           C KC KRFSHSGSYSQHMNHRYSYCK
Sbjct: 962 CDKCGKRFSHSGSYSQHMNHRYSYCK 987

Acts as a transcriptional repressor. Positively regulates neuronal differentiation. Represses transcription by binding to the E box-containing promoter (By similarity). Binds to delta 1-crystallin enhancer core and represses lens-specific transcription. It binds as well many other non-lens specific DNA sequences.

Gallus gallus (taxid: 9031)

>sp|P37275|ZEB1_HUMAN Zinc finger E-box-binding homeobox 1 OS=Homo sapiens GN=ZEB1 PE=1 SV=2

 Score =  148 bits (373), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 114/219 (52%), Gaps = 32/219 (14%)

Query: 7   PVSVYF-MVLVKLKSRLMMSSNGTMSCADDNSGEGQ-FLCDQCDKVFAKHSSLARHKYEH 64
           P+++    V  +L + + ++   ++ C    +   Q  L  Q    ++   S A  +   
Sbjct: 799 PINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSTTVSPAVQEPPL 858

Query: 65  SVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSS 124
            V+Q                P  +  E  D  S       D+ D DS+  K K R     
Sbjct: 859 KVIQ----------------PNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMR----- 897

Query: 125 NGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLT 184
                     +  G + CD CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL 
Sbjct: 898 ---------KTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLI 948

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCK 223
           EH RLHSGEKP+QC KC KRFSHSGSYSQHMNHRYSYCK
Sbjct: 949 EHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCK 987

Acts as a transcriptional repressor. Inhibits interleukin-2 (IL-2) gene expression. Enhances or represses the promoter activity of the ATP1A1 gene depending on the quantity of cDNA and on the cell type. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1. Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.

Homo sapiens (taxid: 9606)

>sp|Q62947|ZEB1_RAT Zinc finger E-box-binding homeobox 1 OS=Rattus norvegicus GN=Zeb1 PE=2 SV=2

 Score =  148 bits (373), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 116/219 (52%), Gaps = 33/219 (15%)

Query: 7   PVSVYF-MVLVKLKSRLMMSSNGTMSCADDNSGEGQ-FLCDQCDKVFAKHSSLARHKYEH 64
           P+++    V  +L + + ++   ++ C    +   Q  L  Q    ++   S A  +   
Sbjct: 777 PINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAMQEPPV 836

Query: 65  SVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSS 124
            V+Q                P  +  E  D  S EG    D+ D D +  K K+R     
Sbjct: 837 KVIQ----------------PNGNQDERQDTSS-EGVSVEDQNDSDCTPPKKKTR----- 874

Query: 125 NGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLT 184
                     +  G + CD CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL 
Sbjct: 875 ---------KAENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKHKHHLI 925

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCK 223
           EH RLHSGEKP+QC KC KRFSHSGSYSQHMNHRYSYCK
Sbjct: 926 EHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCK 964

Acts as a transcriptional repressor. Binds to E-box sequences in the immunoglobulin heavy chain enhancer as well as in the regulatory regions of many other tissue-specific genes. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1. Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.

Rattus norvegicus (taxid: 10116)

>sp|Q9R0G7|ZEB2_MOUSE Zinc finger E-box-binding homeobox 2 OS=Mus musculus GN=Zeb2 PE=1 SV=2

 Score =  145 bits (367), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/86 (76%), Positives = 72/86 (83%)

Query: 138  GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ 197
            G + CD CDK F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+Q
Sbjct: 997  GMYACDLCDKTFQKSSSLLRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQ 1056

Query: 198  CCKCLKRFSHSGSYSQHMNHRYSYCK 223
            C KC KRFSHSGSYSQHMNHRYSYCK
Sbjct: 1057 CDKCGKRFSHSGSYSQHMNHRYSYCK 1082

Transcriptional inhibitor that binds to DNA sequence 5'-CACCT-3' in different promoters. Represses transcription of E-cadherin.

Mus musculus (taxid: 10090)

>sp|O60315|ZEB2_HUMAN Zinc finger E-box-binding homeobox 2 OS=Homo sapiens GN=ZEB2 PE=1 SV=1

 Score =  145 bits (367), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/86 (76%), Positives = 72/86 (83%)

Query: 138  GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ 197
            G + CD CDK F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+Q
Sbjct: 997  GMYACDLCDKTFQKSSSLLRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQ 1056

Query: 198  CCKCLKRFSHSGSYSQHMNHRYSYCK 223
            C KC KRFSHSGSYSQHMNHRYSYCK
Sbjct: 1057 CDKCGKRFSHSGSYSQHMNHRYSYCK 1082

Transcriptional inhibitor that binds to DNA sequence 5'-CACCT-3' in different promoters. Represses transcription of E-cadherin.

Homo sapiens (taxid: 9606)

>sp|Q86XU0|ZN677_HUMAN Zinc finger protein 677 OS=Homo sapiens GN=ZNF677 PE=2 SV=1

 Score =  102 bits (253), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 14/178 (7%)

Query: 37  SGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMG 96
           +GE  + C++CDK FA+ SSL +HK  H+            +  ICN    ++ + S + 
Sbjct: 370 TGEKPYKCNECDKAFAERSSLTQHKRIHTG----------EKPYICNECGKAFKQCSHLT 419

Query: 97  SLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLA 156
             +         E   +  +  R  + S+  +     ++GE  + C++CDK F K S L 
Sbjct: 420 RHQNIHP----GEKPHKCNVCGRAFIQSSSLVEHQRIHTGEKPYKCNKCDKAFIKRSHLW 475

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
            H+  H+G++PYKC EC KAF  + +LT+HK++H+GEKP++C +C K F+   + ++H
Sbjct: 476 GHQRTHTGEKPYKCTECGKAFTERSNLTQHKKIHTGEKPYKCTECGKAFTQFANLTRH 533

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
157167629	723	zinc finger protein [Aedes aegypti] gi|1	0.484	0.152	0.794	2e-47
347964487	1114	AGAP000779-PA [Anopheles gambiae str. PE	0.392	0.079	0.923	3e-47
347964489	908	AGAP000779-PB [Anopheles gambiae str. PE	0.392	0.098	0.923	4e-47
170055034	853	zinc finger protein 1 [Culex quinquefasc	0.392	0.104	0.913	1e-46
357614270	890	putative zinc finger protein [Danaus ple	0.392	0.1	0.880	7e-46
383855032	590	PREDICTED: uncharacterized protein LOC10	0.400	0.154	0.901	2e-45
345488653	823	PREDICTED: hypothetical protein LOC10012	0.440	0.121	0.815	3e-45
322799943	592	hypothetical protein SINV_03650 [Solenop	0.546	0.209	0.682	4e-45
340713269	744	PREDICTED: hypothetical protein LOC10064	0.387	0.118	0.901	6e-45
350420262	744	PREDICTED: hypothetical protein LOC10074	0.387	0.118	0.901	6e-45

>gi|157167629|ref|XP_001655279.1| zinc finger protein [Aedes aegypti] gi|108882137|gb|EAT46362.1| AAEL002451-PA, partial [Aedes aegypti]

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 89/112 (79%), Positives = 97/112 (86%), Gaps = 2/112 (1%)

Query: 116 LKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPK 175
           +  R++ S+  T     D   EGQ++CDQCDK F+KHSSL RHKYEHSGQRPYKCVECPK
Sbjct: 612 VPKRVLYSTANTGKEQPD--AEGQYICDQCDKAFSKHSSLQRHKYEHSGQRPYKCVECPK 669

Query: 176 AFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           AFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR+
Sbjct: 670 AFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRD 721

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347964487|ref|XP_311317.5| AGAP000779-PA [Anopheles gambiae str. PEST] gi|333467554|gb|EAA06926.5| AGAP000779-PA [Anopheles gambiae str. PEST]

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 85/92 (92%), Positives = 89/92 (96%)

Query: 136  GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
             EGQ++CDQCDK F+KHSSL RHKYEHSGQRPYKC+ECPKAFKHKHHLTEHKRLHSGEKP
Sbjct: 1021 AEGQYVCDQCDKTFSKHSSLQRHKYEHSGQRPYKCMECPKAFKHKHHLTEHKRLHSGEKP 1080

Query: 196  FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
            FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE
Sbjct: 1081 FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 1112

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347964489|ref|XP_003437097.1| AGAP000779-PB [Anopheles gambiae str. PEST] gi|333467555|gb|EGK96600.1| AGAP000779-PB [Anopheles gambiae str. PEST]

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 85/92 (92%), Positives = 89/92 (96%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
            EGQ++CDQCDK F+KHSSL RHKYEHSGQRPYKC+ECPKAFKHKHHLTEHKRLHSGEKP
Sbjct: 815 AEGQYVCDQCDKTFSKHSSLQRHKYEHSGQRPYKCMECPKAFKHKHHLTEHKRLHSGEKP 874

Query: 196 FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE
Sbjct: 875 FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 906

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170055034|ref|XP_001863400.1| zinc finger protein 1 [Culex quinquefasciatus] gi|167875144|gb|EDS38527.1| zinc finger protein 1 [Culex quinquefasciatus]

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 84/92 (91%), Positives = 89/92 (96%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
            EGQ++CDQCDK F+KHSSL RHKYEHSGQRPYKC+ECPKAFKHKHHLTEHKRLHSGEKP
Sbjct: 760 AEGQYVCDQCDKAFSKHSSLQRHKYEHSGQRPYKCLECPKAFKHKHHLTEHKRLHSGEKP 819

Query: 196 FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR+
Sbjct: 820 FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRD 851

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614270|gb|EHJ68998.1| putative zinc finger protein [Danaus plexippus]

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 81/92 (88%), Positives = 88/92 (95%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           GEGQF+CDQCDK F K SSLARHKYEHSGQRPYKC+ECPKAFKHKHHLTEHKRLH+GEKP
Sbjct: 799 GEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCLECPKAFKHKHHLTEHKRLHTGEKP 858

Query: 196 FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           FQCCKCLK+FSHSGSYSQHMNHR++ CKPYR+
Sbjct: 859 FQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD 890

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855032|ref|XP_003703023.1| PREDICTED: uncharacterized protein LOC100879563 [Megachile rotundata]

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 82/91 (90%), Positives = 87/91 (95%)

Query: 137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
           +G + CD+CDK F+KHSSLARHKYEHSGQRPYKCVECP+AFKHKHHLTEHKRLHSGEKPF
Sbjct: 500 QGVYFCDRCDKTFSKHSSLARHKYEHSGQRPYKCVECPRAFKHKHHLTEHKRLHSGEKPF 559

Query: 197 QCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           QC KCLKRFSHSGSYSQHMNHRYSYCKPYRE
Sbjct: 560 QCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE 590

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345488653|ref|XP_001603836.2| PREDICTED: hypothetical protein LOC100120173 [Nasonia vitripennis]

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 84/103 (81%), Positives = 89/103 (86%)

Query: 125 NGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLT 184
           N   +   +   EG + C+QCDK F+KHSSLARHKYEHSGQRPYKC ECPKAFKHKHHLT
Sbjct: 721 NADPAPQTETEQEGLYFCNQCDKTFSKHSSLARHKYEHSGQRPYKCQECPKAFKHKHHLT 780

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           EHKRLHSGEKPFQC KCLKRFSHSGSYSQHMNHRYSYCKPYRE
Sbjct: 781 EHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE 823

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799943|gb|EFZ21069.1| hypothetical protein SINV_03650 [Solenopsis invicta]

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 86/126 (68%), Positives = 102/126 (80%), Gaps = 2/126 (1%)

Query: 102 ESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYE 161
           E +   +++ +  K +S +   S  T + A++   +G + CD+C+K F+KHSSL RHKYE
Sbjct: 469 EEIITKNQNQANAKGESEVAPQSEITPAAAENE--QGLYFCDRCEKTFSKHSSLTRHKYE 526

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSY 221
           HSGQRPYKCVECP+AFKHKHHLTEHKRLHSGEKPFQC KCLKRFSHSGSYSQHMNHRYSY
Sbjct: 527 HSGQRPYKCVECPRAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSY 586

Query: 222 CKPYRE 227
           CKPYRE
Sbjct: 587 CKPYRE 592

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713269|ref|XP_003395167.1| PREDICTED: hypothetical protein LOC100642685 [Bombus terrestris]

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 82/91 (90%), Positives = 87/91 (95%)

Query: 137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
           +G + CD+CDK F+KHSSLARHKYEHSGQRPYKCVECP+AFKHKHHLTEHKRLHSGEKPF
Sbjct: 654 QGVYFCDRCDKTFSKHSSLARHKYEHSGQRPYKCVECPRAFKHKHHLTEHKRLHSGEKPF 713

Query: 197 QCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           QC KCLKRFSHSGSYSQHMNHRYSYCKPYRE
Sbjct: 714 QCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE 744

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420262|ref|XP_003492453.1| PREDICTED: hypothetical protein LOC100748737 [Bombus impatiens]

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 82/91 (90%), Positives = 87/91 (95%)

Query: 137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
           +G + CD+CDK F+KHSSLARHKYEHSGQRPYKCVECP+AFKHKHHLTEHKRLHSGEKPF
Sbjct: 654 QGVYFCDRCDKTFSKHSSLARHKYEHSGQRPYKCVECPRAFKHKHHLTEHKRLHSGEKPF 713

Query: 197 QCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE 227
           QC KCLKRFSHSGSYSQHMNHRYSYCKPYRE
Sbjct: 714 QCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE 744

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
WB|WBGene00006970	596	zag-1 [Caenorhabditis elegans	0.599	0.228	0.654	2e-51
FB|FBgn0004606	1054	zfh1 "Zn finger homeodomain 1"	0.563	0.121	0.666	1e-47
UNIPROTKB|F5H4I8	1057	ZEB1 "Zinc finger E-box-bindin	0.550	0.118	0.560	7.4e-39
UNIPROTKB|Q5VZ84	1104	ZEB1 "Zinc finger E-box-bindin	0.550	0.113	0.560	8.8e-39
UNIPROTKB|E9PCM7	1108	ZEB1 "Zinc finger E-box-bindin	0.550	0.112	0.560	8.9e-39
UNIPROTKB|P37275	1124	ZEB1 "Zinc finger E-box-bindin	0.550	0.111	0.560	9.4e-39
UNIPROTKB|F1N264	1107	ZEB1 "Uncharacterized protein"	0.550	0.112	0.560	2.9e-38
MGI|MGI:1344313	1117	Zeb1 "zinc finger E-box bindin	0.550	0.111	0.560	3.1e-38
UNIPROTKB|E2RB20	1125	ZEB1 "Uncharacterized protein"	0.550	0.111	0.560	5.1e-38
UNIPROTKB|G3V1R3	906	ZEB1 "Zinc finger E-box-bindin	0.550	0.137	0.560	5.3e-38

WB|WBGene00006970 zag-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 485 (175.8 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
 Identities = 93/142 (65%), Positives = 103/142 (72%)

Query:    89 YPELSDMGSLEG-DESLDRM--DEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQC 145
             YP + D  SL   +++LD+    ED +     +   +    T    ++   EG F CDQC
Sbjct:   430 YPSILDSASLSVLEKALDQQKSSEDDASSLCSNESKLLKFPTTPLKEE---EGLFSCDQC 486

Query:   146 DKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRF 205
             DKVF K SSLARHKYEHSGQRPYKC  C KAFKHKHHLTEHKRLHSGEKPFQC KCLKRF
Sbjct:   487 DKVFGKQSSLARHKYEHSGQRPYKCDICEKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRF 546

Query:   206 SHSGSYSQHMNHRYSYCKPYRE 227
             SHSGSYSQHMNHRYSYCKPYRE
Sbjct:   547 SHSGSYSQHMNHRYSYCKPYRE 568

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0045773 "positive regulation of axon extension" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

FB|FBgn0004606 zfh1 "Zn finger homeodomain 1" [Drosophila melanogaster (taxid:7227)]

 Score = 487 (176.5 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
 Identities = 90/135 (66%), Positives = 101/135 (74%)

Query:   100 GDESLDRMDEDSS---ERKLKSRLMMSSNGTMSCADDNSGEGQ----FLCDQCDKVFAKH 152
             G E     D+DS    E +  + ++M        A+ +   G     ++CDQCDK FAK 
Sbjct:   920 GSEKRSWRDDDSRISHEDEFGAGVLMPPKPRRGKAETHGHAGDPDLPYVCDQCDKAFAKQ 979

Query:   153 SSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYS 212
             SSLARHKYEHSGQRPY+C+ECPKAFKHKHHLTEHKRLHSGEKPFQC KCLKRFSHSGSYS
Sbjct:   980 SSLARHKYEHSGQRPYQCIECPKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYS 1039

Query:   213 QHMNHRYSYCKPYRE 227
             QHMNHRYSYCKPYRE
Sbjct:  1040 QHMNHRYSYCKPYRE 1054

GO:0007399 "nervous system development" evidence=IEP

GO:0007498 "mesoderm development" evidence=IGI;IEP;NAS

GO:0003677 "DNA binding" evidence=TAS

GO:0005634 "nucleus" evidence=ISS;NAS;IDA

GO:0008354 "germ cell migration" evidence=IMP;TAS

GO:0008406 "gonad development" evidence=TAS

GO:0007280 "pole cell migration" evidence=TAS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

GO:0007507 "heart development" evidence=NAS

GO:0007517 "muscle organ development" evidence=NAS

GO:0007417 "central nervous system development" evidence=NAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008045 "motor neuron axon guidance" evidence=IMP

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0048542 "lymph gland development" evidence=IMP

GO:0061321 "garland nephrocyte differentiation" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0007516 "hemocyte development" evidence=IMP

UNIPROTKB|F5H4I8 ZEB1 "Zinc finger E-box-binding homeobox 1" [Homo sapiens (taxid:9606)]

 Score = 396 (144.5 bits), Expect = 7.4e-39, Sum P(2) = 7.4e-39
 Identities = 79/141 (56%), Positives = 93/141 (65%)

Query:    84 RPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLC 142
             +P  +  E  D  S EG  ++ D+ D DS+  K K R               +  G + C
Sbjct:   795 QPNGNQDERQDTSS-EGVSNVEDQNDSDSTPPKKKMR--------------KTENGMYAC 839

Query:   143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
             D CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+QC KC 
Sbjct:   840 DLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCG 899

Query:   203 KRFSHSGSYSQHMNHRYSYCK 223
             KRFSHSGSYSQHMNHRYSYCK
Sbjct:   900 KRFSHSGSYSQHMNHRYSYCK 920

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|Q5VZ84 ZEB1 "Zinc finger E-box-binding homeobox 1" [Homo sapiens (taxid:9606)]

 Score = 396 (144.5 bits), Expect = 8.8e-39, Sum P(2) = 8.8e-39
 Identities = 79/141 (56%), Positives = 93/141 (65%)

Query:    84 RPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLC 142
             +P  +  E  D  S EG  ++ D+ D DS+  K K R               +  G + C
Sbjct:   842 QPNGNQDERQDTSS-EGVSNVEDQNDSDSTPPKKKMR--------------KTENGMYAC 886

Query:   143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
             D CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+QC KC 
Sbjct:   887 DLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCG 946

Query:   203 KRFSHSGSYSQHMNHRYSYCK 223
             KRFSHSGSYSQHMNHRYSYCK
Sbjct:   947 KRFSHSGSYSQHMNHRYSYCK 967

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E9PCM7 ZEB1 "Zinc finger E-box-binding homeobox 1" [Homo sapiens (taxid:9606)]

 Score = 396 (144.5 bits), Expect = 8.9e-39, Sum P(2) = 8.9e-39
 Identities = 79/141 (56%), Positives = 93/141 (65%)

Query:    84 RPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLC 142
             +P  +  E  D  S EG  ++ D+ D DS+  K K R               +  G + C
Sbjct:   846 QPNGNQDERQDTSS-EGVSNVEDQNDSDSTPPKKKMR--------------KTENGMYAC 890

Query:   143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
             D CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+QC KC 
Sbjct:   891 DLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCG 950

Query:   203 KRFSHSGSYSQHMNHRYSYCK 223
             KRFSHSGSYSQHMNHRYSYCK
Sbjct:   951 KRFSHSGSYSQHMNHRYSYCK 971

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|P37275 ZEB1 "Zinc finger E-box-binding homeobox 1" [Homo sapiens (taxid:9606)]

 Score = 396 (144.5 bits), Expect = 9.4e-39, Sum P(2) = 9.4e-39
 Identities = 79/141 (56%), Positives = 93/141 (65%)

Query:    84 RPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLC 142
             +P  +  E  D  S EG  ++ D+ D DS+  K K R               +  G + C
Sbjct:   862 QPNGNQDERQDTSS-EGVSNVEDQNDSDSTPPKKKMR--------------KTENGMYAC 906

Query:   143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
             D CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+QC KC 
Sbjct:   907 DLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCG 966

Query:   203 KRFSHSGSYSQHMNHRYSYCK 223
             KRFSHSGSYSQHMNHRYSYCK
Sbjct:   967 KRFSHSGSYSQHMNHRYSYCK 987

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0070888 "E-box binding" evidence=ISS

GO:0045666 "positive regulation of neuron differentiation" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=TAS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0003714 "transcription corepressor activity" evidence=TAS

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0006955 "immune response" evidence=TAS

GO:0008283 "cell proliferation" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1N264 ZEB1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 397 (144.8 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
 Identities = 79/141 (56%), Positives = 94/141 (66%)

Query:    84 RPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLC 142
             +P+ +  E  D  S EG  ++ D+ D DS+  K K R               +  G + C
Sbjct:   843 QPSGNQDERQDTSS-EGVSNVEDQNDSDSTPPKKKMR--------------KTENGMYAC 887

Query:   143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
             D CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+QC KC 
Sbjct:   888 DLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCG 947

Query:   203 KRFSHSGSYSQHMNHRYSYCK 223
             KRFSHSGSYSQHMNHRYSYCK
Sbjct:   948 KRFSHSGSYSQHMNHRYSYCK 968

GO:0071230 "cellular response to amino acid stimulus" evidence=IEA

GO:0070888 "E-box binding" evidence=IEA

GO:0051216 "cartilage development" evidence=IEA

GO:0051150 "regulation of smooth muscle cell differentiation" evidence=IEA

GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0033081 "regulation of T cell differentiation in thymus" evidence=IEA

GO:0030857 "negative regulation of epithelial cell differentiation" evidence=IEA

GO:0017015 "regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0010464 "regulation of mesenchymal cell proliferation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0007389 "pattern specification process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1344313 Zeb1 "zinc finger E-box binding homeobox 1" [Mus musculus (taxid:10090)]

 Score = 397 (144.8 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
 Identities = 79/141 (56%), Positives = 94/141 (66%)

Query:    84 RPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLC 142
             +P  +  E  D  S EG  ++ D+ D DS+  K K+R               +  G + C
Sbjct:   840 QPNGNQDERQDTSS-EGVSTVEDQNDSDSTPPKKKTR--------------KTENGMYAC 884

Query:   143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
             D CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+QC KC 
Sbjct:   885 DLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCG 944

Query:   203 KRFSHSGSYSQHMNHRYSYCK 223
             KRFSHSGSYSQHMNHRYSYCK
Sbjct:   945 KRFSHSGSYSQHMNHRYSYCK 965

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO;IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=ISO;IDA

GO:0003690 "double-stranded DNA binding" evidence=ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005667 "transcription factor complex" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007389 "pattern specification process" evidence=IMP

GO:0007399 "nervous system development" evidence=IEA

GO:0007417 "central nervous system development" evidence=IGI

GO:0008134 "transcription factor binding" evidence=IPI

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0010464 "regulation of mesenchymal cell proliferation" evidence=IMP

GO:0017015 "regulation of transforming growth factor beta receptor signaling pathway" evidence=IGI

GO:0030154 "cell differentiation" evidence=IEA

GO:0030857 "negative regulation of epithelial cell differentiation" evidence=IMP

GO:0033081 "regulation of T cell differentiation in thymus" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=ISO

GO:0045666 "positive regulation of neuron differentiation" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IGI;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0048513 "organ development" evidence=IMP

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IMP

GO:0048598 "embryonic morphogenesis" evidence=IGI

GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP

GO:0048752 "semicircular canal morphogenesis" evidence=IMP

GO:0051150 "regulation of smooth muscle cell differentiation" evidence=IMP

GO:0051216 "cartilage development" evidence=IMP

GO:0070888 "E-box binding" evidence=IDA

GO:0071230 "cellular response to amino acid stimulus" evidence=IDA

GO:0090103 "cochlea morphogenesis" evidence=IMP

UNIPROTKB|E2RB20 ZEB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 396 (144.5 bits), Expect = 5.1e-38, Sum P(2) = 5.1e-38
 Identities = 79/141 (56%), Positives = 93/141 (65%)

Query:    84 RPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLC 142
             +P  +  E  D  S EG  ++ D+ D DS+  K K R               +  G + C
Sbjct:   862 QPNGNQEERQDTSS-EGVSNVEDQNDSDSTPPKKKMR--------------KTENGMYAC 906

Query:   143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
             D CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+QC KC 
Sbjct:   907 DLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCG 966

Query:   203 KRFSHSGSYSQHMNHRYSYCK 223
             KRFSHSGSYSQHMNHRYSYCK
Sbjct:   967 KRFSHSGSYSQHMNHRYSYCK 987

GO:0071230 "cellular response to amino acid stimulus" evidence=IEA

GO:0070888 "E-box binding" evidence=IEA

GO:0051216 "cartilage development" evidence=IEA

GO:0051150 "regulation of smooth muscle cell differentiation" evidence=IEA

GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0033081 "regulation of T cell differentiation in thymus" evidence=IEA

GO:0030857 "negative regulation of epithelial cell differentiation" evidence=IEA

GO:0017015 "regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0010464 "regulation of mesenchymal cell proliferation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0007389 "pattern specification process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|G3V1R3 ZEB1 "Zinc finger E-box-binding homeobox 1" [Homo sapiens (taxid:9606)]

 Score = 396 (144.5 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
 Identities = 79/141 (56%), Positives = 93/141 (65%)

Query:    84 RPTASYPELSDMGSLEGDESL-DRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLC 142
             +P  +  E  D  S EG  ++ D+ D DS+  K K R               +  G + C
Sbjct:   644 QPNGNQDERQDTSS-EGVSNVEDQNDSDSTPPKKKMR--------------KTENGMYAC 688

Query:   143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
             D CDK+F K SSL RHKYEH+G+RP++C  C KAFKHKHHL EH RLHSGEKP+QC KC 
Sbjct:   689 DLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCG 748

Query:   203 KRFSHSGSYSQHMNHRYSYCK 223
             KRFSHSGSYSQHMNHRYSYCK
Sbjct:   749 KRFSHSGSYSQHMNHRYSYCK 769

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003690 "double-stranded DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0007389 "pattern specification process" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0010464 "regulation of mesenchymal cell proliferation" evidence=IEA

GO:0014823 "response to activity" evidence=IEA

GO:0017015 "regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0030857 "negative regulation of epithelial cell differentiation" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0031667 "response to nutrient levels" evidence=IEA

GO:0033081 "regulation of T cell differentiation in thymus" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA

GO:0051150 "regulation of smooth muscle cell differentiation" evidence=IEA

GO:0051216 "cartilage development" evidence=IEA

GO:0070888 "E-box binding" evidence=IEA

GO:0071230 "cellular response to amino acid stimulus" evidence=IEA

GO:0071560 "cellular response to transforming growth factor beta stimulus" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
G5EBU4	ZAG1_CAEEL	No assigned EC number	0.9120	0.4008	0.1526	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	227
KOG2462|consensus	279		99.92
KOG2462|consensus	279		99.86
KOG1074|consensus	958		99.79
KOG1074|consensus	958		99.77
KOG3623|consensus	1007		99.73
KOG3576|consensus	267		99.7
KOG3608|consensus	467		99.64
KOG3608|consensus	467		99.62
KOG3576|consensus	267		99.62
KOG3623|consensus	1007		99.56
PHA00733	128	hypothetical protein	99.23
PLN03086	567	PRLI-interacting factor K; Provisional	99.13
PHA00733	128	hypothetical protein	99.06
PHA02768	55	hypothetical protein; Provisional	98.88
PHA02768	55	hypothetical protein; Provisional	98.87
PLN03086	567	PRLI-interacting factor K; Provisional	98.85
KOG3993|consensus	500		98.81
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.7
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.55
KOG3993|consensus	500		98.45
PHA00616	44	hypothetical protein	98.41
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.23
PHA00732	79	hypothetical protein	98.19
PHA00616	44	hypothetical protein	98.19
PHA00732	79	hypothetical protein	98.13
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.11
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.02
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.01
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.96
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.9
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.89
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.82
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.78
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.62
smart00355	26	ZnF_C2H2 zinc finger.	97.43
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.35
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.29
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.29
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.14
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.95
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.89
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.85
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.85
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.8
smart00355	26	ZnF_C2H2 zinc finger.	96.8
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.76
PRK04860	160	hypothetical protein; Provisional	96.27
PRK04860	160	hypothetical protein; Provisional	96.05
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.91
KOG2231|consensus	669		95.69
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.12
KOG1146|consensus	1406		94.87
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.79
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.22
KOG4173|consensus	253		93.86
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.86
KOG1146|consensus	1406		93.84
KOG2893|consensus	341		93.43
KOG2785|consensus	390		92.24
KOG2482|consensus	423		90.46
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	90.13
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	90.09
PF12907	40	zf-met2: Zinc-binding	89.58
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	89.5
COG5048	467	FOG: Zn-finger [General function prediction only]	89.19
COG5048	467	FOG: Zn-finger [General function prediction only]	89.0
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.97
KOG2785|consensus	390		88.76
COG4049	65	Uncharacterized protein containing archaeal-type C	88.59
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	88.34
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	88.3
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.95
COG4049	65	Uncharacterized protein containing archaeal-type C	87.53
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	87.06
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	86.65
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	86.64
KOG2186|consensus	276		86.58
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	85.35
COG1592	166	Rubrerythrin [Energy production and conversion]	84.97
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.83
COG1592	166	Rubrerythrin [Energy production and conversion]	84.35
PHA00626	59	hypothetical protein	83.74
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.57
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	82.12
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	81.48
KOG4167|consensus	907		81.34
PRK06266	178	transcription initiation factor E subunit alpha; V	81.26
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	81.19
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	80.84
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	80.57
COG5236	493	Uncharacterized conserved protein, contains RING Z	80.53
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	80.37

>KOG2462|consensus

Probab=99.92  E-value=3.4e-26  Score=167.74  Aligned_cols=139  Identities=28%  Similarity=0.530  Sum_probs=116.9

Q ss_pred             CCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHHHh
Q psy16147         38 GEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLK  117 (227)
Q Consensus        38 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (227)
                      ....|.|+.||+.+.+..+|-+|..+|-....    -....|..|++.+.....|.-|+                     
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s----~ka~~C~~C~K~YvSmpALkMHi---------------------  181 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDS----KKAFSCKYCGKVYVSMPALKMHI---------------------  181 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccc----cccccCCCCCceeeehHHHhhHh---------------------
Confidence            45679999999999999999999999966543    12335677777776554333332                     


Q ss_pred             hhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcc
Q psy16147        118 SRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ  197 (227)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  197 (227)
                                    ++|+  -++.|.+||+.|...=-|+-|+++|+|+|||.|..|++.|....+|+.|+.+|.+.+.|+
T Consensus       182 --------------rTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~q  245 (279)
T KOG2462|consen  182 --------------RTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQ  245 (279)
T ss_pred             --------------hccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcccc
Confidence                          2333  568999999999999889999999999999999999999999999999999999999999


Q ss_pred             cccccccccCchhHHHhhhc
Q psy16147        198 CCKCLKRFSHSGSYSQHMNH  217 (227)
Q Consensus       198 C~~C~~~f~~~~~l~~H~~~  217 (227)
                      |..|+++|...+.|.+|..+
T Consensus       246 C~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  246 CPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             CcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999873

>KOG2462|consensus

Probab=99.86  E-value=4.2e-22  Score=146.33  Aligned_cols=87  Identities=36%  Similarity=0.645  Sum_probs=80.9

Q ss_pred             CCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhh
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      .+.+.|+.|+++|...-.|.+|+++|.  -+.+|.+||+.|.+.+.|..|+|.|+||+||.|+.|++.|.++++|+.|++
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ  236 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ  236 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHH
Confidence            577899999999999999999999996  689999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCC
Q psy16147        217 HRYSYCKPYR  226 (227)
Q Consensus       217 ~~h~~~~~~~  226 (227)
                      +| .+.++|.
T Consensus       237 TH-S~~K~~q  245 (279)
T KOG2462|consen  237 TH-SDVKKHQ  245 (279)
T ss_pred             hh-cCCcccc
Confidence            65 6666663

>KOG1074|consensus

Probab=99.79  E-value=6.4e-20  Score=152.13  Aligned_cols=87  Identities=30%  Similarity=0.566  Sum_probs=79.3

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCC----Ccccc---cccccccCchh
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK----PFQCC---KCLKRFSHSGS  210 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~~C~---~C~~~f~~~~~  210 (227)
                      .+-.|-+|.++....+.|+.|.++|+|+++|+|.+|++.|.++.+|+.|+..|...-    .+.|+   +|-+.|...-.
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            367899999999999999999999999999999999999999999999999987543    48999   99999999999


Q ss_pred             HHHhhhcccccccC
Q psy16147        211 YSQHMNHRYSYCKP  224 (227)
Q Consensus       211 l~~H~~~~h~~~~~  224 (227)
                      |..|++.|..+.+|
T Consensus       684 lpQhIriH~~~~~s  697 (958)
T KOG1074|consen  684 LPQHIRIHLGGQIS  697 (958)
T ss_pred             ccceEEeecCCCCC
Confidence            99999977666655

>KOG1074|consensus

Probab=99.77  E-value=1.9e-19  Score=149.31  Aligned_cols=209  Identities=17%  Similarity=0.294  Sum_probs=136.2

Q ss_pred             HHHhhhhhccccCCccccCCCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCccc
Q psy16147         15 LVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSD   94 (227)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~   94 (227)
                      -|.+..|++.=..-+.+|-..|+||+||+|.|||..|.+++||+.||-+|......+..+..+...+|...|...-.+..
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQ  686 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQ  686 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccc
Confidence            35555667777788889999999999999999999999999999999999776665555544444599999988877777


Q ss_pred             CCCCCCCCCccCC-----------CCCchHHHH------hhhhhcCCC-----CcccccCCCCCCC----ccccCcCccc
Q psy16147         95 MGSLEGDESLDRM-----------DEDSSERKL------KSRLMMSSN-----GTMSCADDNSGEG----QFLCDQCDKV  148 (227)
Q Consensus        95 ~~~~~~~~~~~~~-----------~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~~~~~----~~~C~~C~~~  148 (227)
                      ++..+....+...           .+..+....      .........     ......+.+....    +..+..|+..
T Consensus       687 hIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~~  766 (958)
T KOG1074|consen  687 HIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGRE  766 (958)
T ss_pred             eEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccccccc
Confidence            6655332111111           111111111      000000000     0000011112212    3455666665


Q ss_pred             cCChhHHHhHHhhh-----------------------cCC----------------------------------------
Q psy16147        149 FAKHSSLARHKYEH-----------------------SGQ----------------------------------------  165 (227)
Q Consensus       149 f~~~~~l~~H~~~h-----------------------~~~----------------------------------------  165 (227)
                      +.....+..+--..                       +++                                        
T Consensus       767 ~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~n  846 (958)
T KOG1074|consen  767 LEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKTN  846 (958)
T ss_pred             cCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccccccc
Confidence            55544433321110                       000                                        


Q ss_pred             -------------------------------CCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHh
Q psy16147        166 -------------------------------RPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH  214 (227)
Q Consensus       166 -------------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  214 (227)
                                                     -...|.+|++.|....+|..|++.|++++||.|..|++.|..+.+|+.|
T Consensus       847 ~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvH  926 (958)
T KOG1074|consen  847 EITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVH  926 (958)
T ss_pred             cccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhh
Confidence                                           0167999999999999999999999999999999999999999999999


Q ss_pred             hhccccccc
Q psy16147        215 MNHRYSYCK  223 (227)
Q Consensus       215 ~~~~h~~~~  223 (227)
                      +.+|+-..-
T Consensus       927 MgtH~w~q~  935 (958)
T KOG1074|consen  927 MGTHMWVQP  935 (958)
T ss_pred             hccccccCC
Confidence            997764443

>KOG3623|consensus

Probab=99.73  E-value=8.9e-19  Score=143.45  Aligned_cols=93  Identities=85%  Similarity=1.500  Sum_probs=90.5

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHh
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH  214 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  214 (227)
                      +.+..|.|..|.++|.-.+.|.+|...|+|.++|+|.+|.+.|+.+..|..|+|+|.|++||+|..|+++|...+.+.+|
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQH  969 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQH  969 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhh
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccccCCCC
Q psy16147        215 MNHRYSYCKPYRE  227 (227)
Q Consensus       215 ~~~~h~~~~~~~~  227 (227)
                      +.++-.-++||+|
T Consensus       970 MNHRYSYCKpyrE  982 (1007)
T KOG3623|consen  970 MNHRYSYCKPYRE  982 (1007)
T ss_pred             hccchhcccchhh
Confidence            9999999999997

>KOG3576|consensus

Probab=99.70  E-value=6.6e-18  Score=118.59  Aligned_cols=118  Identities=32%  Similarity=0.577  Sum_probs=102.4

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHH
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSER  114 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (227)
                      +-++...|.|.+|++.|.-..-|++|++-|..                                                
T Consensus       111 sssd~d~ftCrvCgK~F~lQRmlnrh~kch~~------------------------------------------------  142 (267)
T KOG3576|consen  111 SSSDQDSFTCRVCGKKFGLQRMLNRHLKCHSD------------------------------------------------  142 (267)
T ss_pred             CCCCCCeeeeehhhhhhhHHHHHHHHhhhccH------------------------------------------------
Confidence            33456679999999999999999999986631                                                


Q ss_pred             HHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhh-ccC-
Q psy16147        115 KLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRL-HSG-  192 (227)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~-  192 (227)
                                            -+.+.|..||++|....+|.+|+++|+|.+||+|..|++.|.+.-.|..|.+. |.. 
T Consensus       143 ----------------------vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~  200 (267)
T KOG3576|consen  143 ----------------------VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQ  200 (267)
T ss_pred             ----------------------HHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCch
Confidence                                  24578999999999999999999999999999999999999999999999774 532 


Q ss_pred             ---------CCCcccccccccccCchhHHHhhhcccccc
Q psy16147        193 ---------EKPFQCCKCLKRFSHSGSYSQHMNHRYSYC  222 (227)
Q Consensus       193 ---------~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  222 (227)
                               ++.|.|..||.+-.....+..|++.+|+..
T Consensus       201 ~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  201 HQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence                     456999999999999999999999888653

>KOG3608|consensus

Probab=99.64  E-value=6.7e-17  Score=122.48  Aligned_cols=190  Identities=21%  Similarity=0.335  Sum_probs=129.0

Q ss_pred             hccccCCccccCCCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCC
Q psy16147         22 LMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGD  101 (227)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~  101 (227)
                      .+.+...+..|+..|+++|...|..||..|.++..|.-|++..+...+.     ...|..|.+.|++...|..|...+..
T Consensus       188 ~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n-----~fqC~~C~KrFaTeklL~~Hv~rHvn  262 (467)
T KOG3608|consen  188 HMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTN-----SFQCAQCFKRFATEKLLKSHVVRHVN  262 (467)
T ss_pred             hhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCC-----chHHHHHHHHHhHHHHHHHHHHHhhh
Confidence            5666677778888999999999999999999999999998866543321     22334444444443333222111100


Q ss_pred             CCccCCCCCchHHHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC--CCcccCC
Q psy16147        102 ESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKH  179 (227)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  179 (227)
                       ..   ++..+.-..........    +..-.|..+++|+|..|.+.+.+.++|..|...|. +..|+|+.  |.+.+.+
T Consensus       263 -~y---kCplCdmtc~~~ssL~~----H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~  333 (467)
T KOG3608|consen  263 -CY---KCPLCDMTCSSASSLTT----HIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRT  333 (467)
T ss_pred             -cc---cccccccCCCChHHHHH----HHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHH
Confidence             00   00000000000000000    11134567899999999999999999999999886 67899988  9999999


Q ss_pred             chhHHHHHhh-ccCCCC--cccccccccccCchhHHHhhhcccccccCC
Q psy16147        180 KHHLTEHKRL-HSGEKP--FQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       180 ~~~l~~H~~~-h~~~~~--~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      ...+..|++. |.|..|  |.|..|++.|.+-.+|..|++..|.=.-|+
T Consensus       334 ~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~Ps  382 (467)
T KOG3608|consen  334 YTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPS  382 (467)
T ss_pred             HHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCC
Confidence            9999999886 657665  999999999999999999999888655553

>KOG3608|consensus

Probab=99.62  E-value=1.3e-16  Score=120.87  Aligned_cols=169  Identities=20%  Similarity=0.297  Sum_probs=92.3

Q ss_pred             CcccCCc--chhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHHHh
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLK  117 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (227)
                      ..+.|..  |.+.+.++++|+.|++.|.++..       ..|+.|+.-|+....+-+|..-..........+..+...+ 
T Consensus       176 pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKv-------vACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrF-  247 (467)
T KOG3608|consen  176 PVTMCNWAMCTKHMGNKYRLREHIRTHSNEKV-------VACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRF-  247 (467)
T ss_pred             ceeeccchhhhhhhccHHHHHHHHHhcCCCeE-------EecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHH-
Confidence            4577876  99999999999999999988763       3467778778776554444221111100000000011000 


Q ss_pred             hhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhh-hcCCCCccCCCCCcccCCchhHHHHHhhccCCCCc
Q psy16147        118 SRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYE-HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF  196 (227)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  196 (227)
                          .+...+..++..|.  .-|+|+.|..+.+..+.|..|++. |..+++|+|+.|+..|.+...|..|...|. +-.|
T Consensus       248 ----aTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y  320 (467)
T KOG3608|consen  248 ----ATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVY  320 (467)
T ss_pred             ----hHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccce
Confidence                00001111111111  235566666666666666666543 334566666666666666666666666555 4446


Q ss_pred             cccc--ccccccCchhHHHhhhccccccc
Q psy16147        197 QCCK--CLKRFSHSGSYSQHMNHRYSYCK  223 (227)
Q Consensus       197 ~C~~--C~~~f~~~~~l~~H~~~~h~~~~  223 (227)
                      .|..  |.++|.+..++++|.+-+|.+..
T Consensus       321 ~C~h~~C~~s~r~~~q~~~H~~evhEg~n  349 (467)
T KOG3608|consen  321 QCEHPDCHYSVRTYTQMRRHFLEVHEGNN  349 (467)
T ss_pred             ecCCCCCcHHHHHHHHHHHHHHHhccCCC
Confidence            6655  66666666666666665554433

>KOG3576|consensus

Probab=99.62  E-value=4.5e-17  Score=114.42  Aligned_cols=88  Identities=31%  Similarity=0.591  Sum_probs=82.8

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHh
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH  214 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  214 (227)
                      .+...|.|.+|++.|....-|.+|++-|...+.+.|..|+++|...-.|.+|++.|+|.+||+|..|++.|+++-.|..|
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            34567999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccc
Q psy16147        215 MNHRYSYC  222 (227)
Q Consensus       215 ~~~~h~~~  222 (227)
                      ++..|+..
T Consensus       193 l~kvhgv~  200 (267)
T KOG3576|consen  193 LKKVHGVQ  200 (267)
T ss_pred             HHHHcCch
Confidence            99888543

>KOG3623|consensus

Probab=99.56  E-value=1.7e-15  Score=124.58  Aligned_cols=80  Identities=58%  Similarity=1.022  Sum_probs=73.6

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcC-------------CCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSG-------------QRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRF  205 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~-------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  205 (227)
                      .|.|..|.++|....+|.+|+..|..             .+.|+|.+|++.|+.+..|+.|+|+|.|++||.|+-|+++|
T Consensus       240 nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRF  319 (1007)
T KOG3623|consen  240 NFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRF  319 (1007)
T ss_pred             CCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCccccccc
Confidence            47799999999999999999998763             25699999999999999999999999999999999999999


Q ss_pred             cCchhHHHhhhcc
Q psy16147        206 SHSGSYSQHMNHR  218 (227)
Q Consensus       206 ~~~~~l~~H~~~~  218 (227)
                      ...+.+..|+.+.
T Consensus       320 SHSGSySSHmSSK  332 (1007)
T KOG3623|consen  320 SHSGSYSSHMSSK  332 (1007)
T ss_pred             ccCCccccccccc
Confidence            9999999998754

>PHA00733 hypothetical protein

Probab=99.23  E-value=4.8e-12  Score=85.73  Aligned_cols=87  Identities=21%  Similarity=0.385  Sum_probs=73.6

Q ss_pred             CCCCccccCcCccccCChhHHHhH--Hh---hhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCch
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARH--KY---EHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSG  209 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  209 (227)
                      ..++++.|.+|...|.....|..+  +.   .+.++++|.|+.|++.|.....|..|++.|  +.+|.|+.|++.|.+..
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~  113 (128)
T PHA00733         36 PEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTD  113 (128)
T ss_pred             hhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHH
Confidence            446789999999998888777665  22   233578999999999999999999999987  45799999999999999


Q ss_pred             hHHHhhhccccccc
Q psy16147        210 SYSQHMNHRYSYCK  223 (227)
Q Consensus       210 ~l~~H~~~~h~~~~  223 (227)
                      .|..|+...|..+.
T Consensus       114 sL~~H~~~~h~~~~  127 (128)
T PHA00733        114 STLDHVCKKHNICV  127 (128)
T ss_pred             HHHHHHHHhcCccc
Confidence            99999999987653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.13  E-value=1.5e-10  Score=95.69  Aligned_cols=80  Identities=16%  Similarity=0.336  Sum_probs=66.4

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCC----------chhHHHHHhhccCCCCcccccccccccC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKH----------KHHLTEHKRLHSGEKPFQCCKCLKRFSH  207 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~  207 (227)
                      .++.|+ ||+.+ ....|..|+..|.+.+++.|..|+..+..          ...|..|...+ |.+++.|..|++.+..
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML  553 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee
Confidence            357899 99755 56899999999999999999999999852          34788898885 8899999999988876


Q ss_pred             chhHHHhhhccccc
Q psy16147        208 SGSYSQHMNHRYSY  221 (227)
Q Consensus       208 ~~~l~~H~~~~h~~  221 (227)
                       ..|..|+...|..
T Consensus       554 -rdm~~H~~~~h~~  566 (567)
T PLN03086        554 -KEMDIHQIAVHQK  566 (567)
T ss_pred             -hhHHHHHHHhhcC
Confidence             5788999887753

>PHA00733 hypothetical protein

Probab=99.06  E-value=1.7e-10  Score=78.18  Aligned_cols=52  Identities=21%  Similarity=0.410  Sum_probs=47.1

Q ss_pred             CCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhc
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  190 (227)
                      .++|.|+.||+.|.....|..|++.+  +.+|.|+.|++.|.....|..|+...
T Consensus        71 ~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733         71 VSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             CCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHh
Confidence            57899999999999999999999876  35799999999999999999998863

>PHA02768 hypothetical protein; Provisional

Probab=98.88  E-value=9e-10  Score=61.77  Aligned_cols=42  Identities=19%  Similarity=0.458  Sum_probs=25.4

Q ss_pred             cccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhH
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHL  183 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  183 (227)
                      |.|+.||+.|...+.|..|++.|+  ++++|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            556666666666666666666665  456666666666554443

>PHA02768 hypothetical protein; Provisional

Probab=98.87  E-value=1.2e-09  Score=61.21  Aligned_cols=44  Identities=20%  Similarity=0.521  Sum_probs=40.8

Q ss_pred             CccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHH
Q psy16147        167 PYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYS  212 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  212 (227)
                      .|.|+.|++.|.....|..|++.|.  ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999998  7999999999999888765

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.85  E-value=1.1e-08  Score=84.95  Aligned_cols=76  Identities=17%  Similarity=0.426  Sum_probs=64.8

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccC----------
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSH----------  207 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----------  207 (227)
                      ..+.|+.|++.|. ..+|..|++.++  +++.|+ |+..+ ....|..|+..|.+.+++.|+.|++.|..          
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhh
Confidence            4468999999996 678999999885  789999 99755 56899999999999999999999999952          


Q ss_pred             chhHHHhhhcc
Q psy16147        208 SGSYSQHMNHR  218 (227)
Q Consensus       208 ~~~l~~H~~~~  218 (227)
                      .+.|..|...+
T Consensus       527 ~s~Lt~HE~~C  537 (567)
T PLN03086        527 LRGMSEHESIC  537 (567)
T ss_pred             hhhHHHHHHhc
Confidence            35799998864

>KOG3993|consensus

Probab=98.81  E-value=3.1e-09  Score=83.19  Aligned_cols=172  Identities=22%  Similarity=0.266  Sum_probs=106.1

Q ss_pred             hhhHHHHhhhhhccccCCccccCCCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCC
Q psy16147         11 YFMVLVKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYP   90 (227)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~   90 (227)
                      |.|++|.-+..|.   ..+-+|.=...---.|+|..|++.|+-.+||-.|.|.|.....-.+.            .....
T Consensus       268 yiCqLCK~kYeD~---F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a------------~~~P~  332 (500)
T KOG3993|consen  268 YICQLCKEKYEDA---FALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKA------------GSPPP  332 (500)
T ss_pred             HHHHHHHHhhhhH---HHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhc------------CCCCh
Confidence            5677777666655   44554443333335599999999999999999999999543221000            00000


Q ss_pred             CcccCCCCCCCCCccCCCCCchHHHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCC----
Q psy16147         91 ELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQR----  166 (227)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----  166 (227)
                               ...        ...+....+....        -....+.-|.|.+|++.|....-|+.|+-+|....    
T Consensus       333 ---------k~~--------~~~rae~~ea~rs--------g~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~  387 (500)
T KOG3993|consen  333 ---------KQA--------VETRAEVQEAERS--------GDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKE  387 (500)
T ss_pred             ---------hhh--------hhhhhhhhhcccc--------CCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchh
Confidence                     000        0000000000000        01123357999999999999999999977665310    


Q ss_pred             ------------------------------------------CccCCCCCcccCCchhHHHHHhhccCCCCccccccccc
Q psy16147        167 ------------------------------------------PYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKR  204 (227)
Q Consensus       167 ------------------------------------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  204 (227)
                                                                ...|+.|+..+..+..--.+.+.-..+..|.|.+|...
T Consensus       388 ~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~at  467 (500)
T KOG3993|consen  388 KAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPAT  467 (500)
T ss_pred             cccCcchhhcccccccccccccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHh
Confidence                                                      02356666666655544445555555667999999999


Q ss_pred             ccCchhHHHhhhcccccc
Q psy16147        205 FSHSGSYSQHMNHRYSYC  222 (227)
Q Consensus       205 f~~~~~l~~H~~~~h~~~  222 (227)
                      |-+.-.|.+|+...|..+
T Consensus       468 fyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  468 FYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             hhcCcchHhHhhhcChHH
Confidence            999999999999888765

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.70  E-value=8.6e-09  Score=49.44  Aligned_cols=24  Identities=54%  Similarity=1.011  Sum_probs=15.8

Q ss_pred             HHHHHhhccCCCCccccccccccc
Q psy16147        183 LTEHKRLHSGEKPFQCCKCLKRFS  206 (227)
Q Consensus       183 l~~H~~~h~~~~~~~C~~C~~~f~  206 (227)
                      |..|++.|.+++||.|+.|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            556666666666666666666664

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.55  E-value=4.6e-08  Score=46.90  Aligned_cols=26  Identities=46%  Similarity=1.003  Sum_probs=23.5

Q ss_pred             HHHhHHhhhcCCCCccCCCCCcccCC
Q psy16147        154 SLARHKYEHSGQRPYKCVECPKAFKH  179 (227)
Q Consensus       154 ~l~~H~~~h~~~~~~~C~~C~~~f~~  179 (227)
                      +|..|++.|.++++|.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999863

...

>KOG3993|consensus

Probab=98.45  E-value=3.4e-08  Score=77.48  Aligned_cols=87  Identities=25%  Similarity=0.552  Sum_probs=71.9

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccC-------------------------
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG-------------------------  192 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------------  192 (227)
                      +-|+|..|-..|.....|.+|.-..--..-|+|++|++.|+-..+|..|.+-|..                         
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            3589999999999999999996544333459999999999999999999987731                         


Q ss_pred             --------CCCcccccccccccCchhHHHhhhcccccccC
Q psy16147        193 --------EKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKP  224 (227)
Q Consensus       193 --------~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  224 (227)
                              +..|.|..|+++|.+...|++|+.+||-...+
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~  385 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLA  385 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccc
Confidence                    12489999999999999999999988865544

>PHA00616 hypothetical protein

Probab=98.41  E-value=1.3e-07  Score=50.45  Aligned_cols=33  Identities=18%  Similarity=0.374  Sum_probs=23.1

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      +|.|+.||+.|...++|.+|++.|++++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            366777777777777777777777777666654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.23  E-value=4.7e-07  Score=42.08  Aligned_cols=23  Identities=39%  Similarity=0.798  Sum_probs=21.5

Q ss_pred             ccCCcchhhhcChhHHHHHHHhc
Q psy16147         42 FLCDQCDKVFAKHSSLARHKYEH   64 (227)
Q Consensus        42 ~~C~~C~~~f~~~~~L~~H~~~h   64 (227)
                      |.|++|++.|.+..+|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=98.19  E-value=1.4e-06  Score=53.72  Aligned_cols=45  Identities=27%  Similarity=0.500  Sum_probs=32.6

Q ss_pred             ccccCcCccccCChhHHHhHHhh-hcCCCCccCCCCCcccCCchhHHHHHhh
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYE-HSGQRPYKCVECPKAFKHKHHLTEHKRL  189 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~  189 (227)
                      +|.|+.|++.|.....|..|++. |.   ++.|+.|++.|.   .+..|...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            46788888888888888888774 44   357888888887   35566654

>PHA00616 hypothetical protein

Probab=98.19  E-value=5.8e-07  Score=48.02  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=22.0

Q ss_pred             CccCCCCCcccCCchhHHHHHhhccCCCCccccc
Q psy16147        167 PYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK  200 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  200 (227)
                      +|+|..||..|.....|..|++.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4566666666666666666666666666665543

>PHA00732 hypothetical protein

Probab=98.13  E-value=2.4e-06  Score=52.62  Aligned_cols=46  Identities=26%  Similarity=0.474  Sum_probs=39.6

Q ss_pred             CccCCCCCcccCCchhHHHHHhh-ccCCCCcccccccccccCchhHHHhhhcc
Q psy16147        167 PYKCVECPKAFKHKHHLTEHKRL-HSGEKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +|.|+.|++.|.....|..|++. |.   ++.|+.|++.|.   .|..|.+++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            57899999999999999999985 65   358999999998   488888654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.11  E-value=3.7e-06  Score=48.06  Aligned_cols=49  Identities=29%  Similarity=0.514  Sum_probs=23.1

Q ss_pred             ccCCCCCcccCCchhHHHHHhh-ccCC-CCcccccccccccCchhHHHhhhccc
Q psy16147        168 YKCVECPKAFKHKHHLTEHKRL-HSGE-KPFQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       168 ~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      |.|+.|++. .+...|..|... |..+ +.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            455555552 233445555443 4433 2355555555433  25666665544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.02  E-value=9.9e-06  Score=46.30  Aligned_cols=49  Identities=24%  Similarity=0.423  Sum_probs=38.6

Q ss_pred             ccccCcCccccCChhHHHhHHhhhc-C-CCCccCCCCCcccCCchhHHHHHhhc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHS-G-QRPYKCVECPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~h  190 (227)
                      .|.||.|++ ..+...|..|....+ . .+.+.|++|...+..  .|..|+..+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~--~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVTD--NLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhhh--HHHHHHHHh
Confidence            488999999 567789999976544 3 457999999987553  888898864

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.01  E-value=3e-06  Score=39.61  Aligned_cols=24  Identities=38%  Similarity=0.708  Sum_probs=20.2

Q ss_pred             ccCCcchhhhcChhHHHHHHHhcc
Q psy16147         42 FLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        42 ~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      |.|++|++.|.+...|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999864

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.96  E-value=3.1e-06  Score=40.93  Aligned_cols=25  Identities=44%  Similarity=0.850  Sum_probs=23.3

Q ss_pred             cccCCcchhhhcChhHHHHHHHhcc
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      +|.|.+|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5899999999999999999999874

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.90  E-value=7.7e-06  Score=37.86  Aligned_cols=23  Identities=39%  Similarity=0.798  Sum_probs=16.6

Q ss_pred             cccCcCccccCChhHHHhHHhhh
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEH  162 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h  162 (227)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            46777777777777777777653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.89  E-value=6.3e-06  Score=53.63  Aligned_cols=77  Identities=22%  Similarity=0.328  Sum_probs=23.6

Q ss_pred             ccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccc
Q psy16147        141 LCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       141 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  220 (227)
                      .|..|+..|.....|..|+...++-..-    ....+.....+..+.+.- ....+.|.+|++.|.+...|..|++.++.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~~H   75 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSKHH   75 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTTT
T ss_pred             Cccccccccccccccccccccccccccc----cccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCccC
Confidence            4899999999999999999766652111    111222333333333321 22369999999999999999999997654


Q ss_pred             cc
Q psy16147        221 YC  222 (227)
Q Consensus       221 ~~  222 (227)
                      ..
T Consensus        76 ~~   77 (100)
T PF12756_consen   76 KK   77 (100)
T ss_dssp             TC
T ss_pred             CC
Confidence            33

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.82  E-value=7.9e-06  Score=38.14  Aligned_cols=24  Identities=38%  Similarity=0.620  Sum_probs=16.7

Q ss_pred             cccccccccccCchhHHHhhhccc
Q psy16147        196 FQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       196 ~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      |.|++|++.|.+...|..|+..+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567788888888888888877654

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.78  E-value=1.2e-05  Score=38.84  Aligned_cols=26  Identities=35%  Similarity=0.677  Sum_probs=19.7

Q ss_pred             CcccccccccccCchhHHHhhhcccc
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~~h~  220 (227)
                      +|.|..|++.|.+...|..|++.++.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            46788888888888888888876553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.62  E-value=2.6e-05  Score=59.50  Aligned_cols=54  Identities=33%  Similarity=0.714  Sum_probs=41.2

Q ss_pred             CCccCCC--CCcccCCchhHHHHHhh-c------------------cCCCCcccccccccccCchhHHHhhhccc
Q psy16147        166 RPYKCVE--CPKAFKHKHHLTEHKRL-H------------------SGEKPFQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       166 ~~~~C~~--C~~~f~~~~~l~~H~~~-h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      |+|+|++  |.+.+++...|+-|+.. |                  ..++||.|++|++++.....|+-|+.+-|
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~Hsh  422 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKHSH  422 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccccC
Confidence            6677766  66777777776666553 3                  23589999999999999999999998654

>smart00355 ZnF_C2H2 zinc finger

Probab=97.43  E-value=0.00011  Score=34.75  Aligned_cols=24  Identities=38%  Similarity=0.798  Sum_probs=21.9

Q ss_pred             ccCCcchhhhcChhHHHHHHHhcc
Q psy16147         42 FLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        42 ~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      |.|..|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999763

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.35  E-value=0.00014  Score=47.25  Aligned_cols=24  Identities=29%  Similarity=0.656  Sum_probs=20.3

Q ss_pred             ccccCcCccccCChhHHHhHHhhh
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEH  162 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h  162 (227)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            588999999999999999998864

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.29  E-value=9.5e-05  Score=34.85  Aligned_cols=23  Identities=39%  Similarity=0.821  Sum_probs=21.0

Q ss_pred             ccCCcchhhhcChhHHHHHHHhc
Q psy16147         42 FLCDQCDKVFAKHSSLARHKYEH   64 (227)
Q Consensus        42 ~~C~~C~~~f~~~~~L~~H~~~h   64 (227)
                      |.|++|+..|.+...|.+|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999999854

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.29  E-value=0.00012  Score=34.12  Aligned_cols=23  Identities=30%  Similarity=0.621  Sum_probs=18.9

Q ss_pred             ccCCcchhhhcChhHHHHHHHhcc
Q psy16147         42 FLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        42 ~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      |+|+.|++..+ ..+|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999999998 999999999864

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.14  E-value=0.00016  Score=55.35  Aligned_cols=52  Identities=25%  Similarity=0.643  Sum_probs=44.5

Q ss_pred             CCccccCc--CccccCChhHHHhHHhhhc-------------------CCCCccCCCCCcccCCchhHHHHHh
Q psy16147        137 EGQFLCDQ--CDKVFAKHSSLARHKYEHS-------------------GQRPYKCVECPKAFKHKHHLTEHKR  188 (227)
Q Consensus       137 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  188 (227)
                      +++|+|++  |.+.+.....|..|+..-+                   .+|||+|++|++.+++...|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            48999987  9999999999999976422                   1488999999999999999988765

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.95  E-value=0.0013  Score=36.10  Aligned_cols=33  Identities=24%  Similarity=0.394  Sum_probs=19.5

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCC
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRP  167 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  167 (227)
                      ..+.+..||+|+..+....+|.+|+...++.++
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            345667788888888888888888776666543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.89  E-value=0.00045  Score=32.45  Aligned_cols=23  Identities=39%  Similarity=0.709  Sum_probs=18.5

Q ss_pred             cccccccccccCchhHHHhhhcc
Q psy16147        196 FQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       196 ~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      |.|.+|+..|.++..|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56888888888888888888754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.85  E-value=0.0015  Score=35.84  Aligned_cols=30  Identities=23%  Similarity=0.361  Sum_probs=21.8

Q ss_pred             CCCCcccCCcchhhhcChhHHHHHHHhccc
Q psy16147         37 SGEGQFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      -.+.|-.|++|+..+....||+.|+.+.++
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            357889999999999999999999987654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.85  E-value=0.00045  Score=32.15  Aligned_cols=23  Identities=17%  Similarity=0.498  Sum_probs=14.1

Q ss_pred             cccccccccccCchhHHHhhhccc
Q psy16147        196 FQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       196 ~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      |.|+.|++... +..|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            46777776666 667777776655

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.80  E-value=0.00061  Score=32.71  Aligned_cols=23  Identities=39%  Similarity=0.700  Sum_probs=19.4

Q ss_pred             cccccccccccCchhHHHhhhcc
Q psy16147        196 FQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       196 ~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      |.|..|++.|.++..|..|+++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            67888999999999999888753

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.80  E-value=0.0012  Score=30.90  Aligned_cols=22  Identities=41%  Similarity=0.785  Sum_probs=13.9

Q ss_pred             ccCcCccccCChhHHHhHHhhh
Q psy16147        141 LCDQCDKVFAKHSSLARHKYEH  162 (227)
Q Consensus       141 ~C~~C~~~f~~~~~l~~H~~~h  162 (227)
                      .|+.|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4666666666666666666544

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.76  E-value=0.00029  Score=33.89  Aligned_cols=23  Identities=43%  Similarity=0.891  Sum_probs=20.5

Q ss_pred             cccCCcchhhhcChhHHHHHHHh
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      .|.|..|++.|.+...|.+|++.
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCCcccCCCCcCCHHHHHHHHcc
Confidence            37899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.27  E-value=0.0024  Score=45.13  Aligned_cols=37  Identities=30%  Similarity=0.850  Sum_probs=21.1

Q ss_pred             CccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccC
Q psy16147        167 PYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSH  207 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  207 (227)
                      +|.|. |+.   ....+..|.++|.++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            45565 554   44455556666666666666666655543

>PRK04860 hypothetical protein; Provisional

Probab=96.05  E-value=0.0035  Score=44.27  Aligned_cols=40  Identities=23%  Similarity=0.593  Sum_probs=34.5

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCch
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKH  181 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  181 (227)
                      -+|.|. |+.   ....+.+|.+.+.++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            579998 998   6677899999999999999999999887543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.91  E-value=0.0047  Score=31.53  Aligned_cols=24  Identities=29%  Similarity=0.641  Sum_probs=21.6

Q ss_pred             CcccCCcchhhhcChhHHHHHHHh
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      .+|.|++|+..|.+..++.+|++.
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            368899999999999999999875

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2231|consensus

Probab=95.69  E-value=0.011  Score=50.66  Aligned_cols=48  Identities=27%  Similarity=0.418  Sum_probs=36.4

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCccCCCCC------cccCCchhHHHHHhhc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECP------KAFKHKHHLTEHKRLH  190 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~------~~f~~~~~l~~H~~~h  190 (227)
                      ...|..|...|.....|..|++.++    |.|..|+      .-|.....|..|.+.+
T Consensus       182 hp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  182 HPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             CccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhc
Confidence            3569999999999999999988665    5666664      4466667788887763

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.12  E-value=0.015  Score=27.22  Aligned_cols=21  Identities=24%  Similarity=0.562  Sum_probs=18.3

Q ss_pred             ccCCcchhhhcChhHHHHHHHh
Q psy16147         42 FLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        42 ~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      .+|..||..| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 88889999864

>KOG1146|consensus

Probab=94.87  E-value=0.015  Score=53.12  Aligned_cols=28  Identities=18%  Similarity=0.271  Sum_probs=25.1

Q ss_pred             CCCCCcccCCcchhhhcChhHHHHHHHh
Q psy16147         36 NSGEGQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      ++-.+.|.|..|+..|+....|..|||.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRs  487 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRS  487 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccc
Confidence            3445899999999999999999999997

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.79  E-value=0.11  Score=40.84  Aligned_cols=77  Identities=22%  Similarity=0.277  Sum_probs=53.4

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCccCCCCC----cccCCchhHHHHHhhccCCCCccccc--cc----ccccCc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECP----KAFKHKHHLTEHKRLHSGEKPFQCCK--CL----KRFSHS  208 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~----~~f~~~~~l~~H~~~h~~~~~~~C~~--C~----~~f~~~  208 (227)
                      ...|..|...|-.-+.|..|++..+. +-+.|+.-+    .-|.+...|..|.+.    .-|.|..  |.    ..|...
T Consensus       220 HP~C~FC~~~FYdDDEL~~HcR~~HE-~ChICD~v~p~~~QYFK~Y~~Le~HF~~----~hy~ct~qtc~~~k~~vf~~~  294 (493)
T COG5236         220 HPLCIFCKIYFYDDDELRRHCRLRHE-ACHICDMVGPIRYQYFKSYEDLEAHFRN----AHYCCTFQTCRVGKCYVFPYH  294 (493)
T ss_pred             CchhhhccceecChHHHHHHHHhhhh-hhhhhhccCccchhhhhCHHHHHHHhhc----CceEEEEEEEecCcEEEeccH
Confidence            35799999999999999999986653 334444322    236677777777764    2255533  32    578889


Q ss_pred             hhHHHhhhcccc
Q psy16147        209 GSYSQHMNHRYS  220 (227)
Q Consensus       209 ~~l~~H~~~~h~  220 (227)
                      ..|..|+..-|.
T Consensus       295 ~el~~h~~~~h~  306 (493)
T COG5236         295 TELLEHLTRFHK  306 (493)
T ss_pred             HHHHHHHHHHhh
Confidence            999999976663

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.22  E-value=0.027  Score=28.60  Aligned_cols=24  Identities=25%  Similarity=0.466  Sum_probs=18.9

Q ss_pred             CcccccccccccCchhHHHhhhcc
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +|.|.+|+..|.....+..|++..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            477888888888888888888744

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=93.86  E-value=0.021  Score=41.25  Aligned_cols=79  Identities=29%  Similarity=0.540  Sum_probs=62.3

Q ss_pred             CccccCc--CccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhh-c---------cCCCCccccc--ccc
Q psy16147        138 GQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRL-H---------SGEKPFQCCK--CLK  203 (227)
Q Consensus       138 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h---------~~~~~~~C~~--C~~  203 (227)
                      ..+.|++  |...|...+.+..|.-+-++   -.|.+|.+.|.+...|..|+-- |         .|...|+|-+  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4577887  77888888888888654444   3899999999999999988763 4         3445699955  999


Q ss_pred             cccCchhHHHhhhccc
Q psy16147        204 RFSHSGSYSQHMNHRY  219 (227)
Q Consensus       204 ~f~~~~~l~~H~~~~h  219 (227)
                      .|.+...-+.|+...|
T Consensus       155 KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhHHHHhc
Confidence            9999999999997666

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.86  E-value=0.044  Score=27.57  Aligned_cols=9  Identities=22%  Similarity=1.065  Sum_probs=4.3

Q ss_pred             cccCcCccc
Q psy16147        140 FLCDQCDKV  148 (227)
Q Consensus       140 ~~C~~C~~~  148 (227)
                      |+|..||..
T Consensus         2 ~~C~~CGy~   10 (33)
T cd00350           2 YVCPVCGYI   10 (33)
T ss_pred             EECCCCCCE
Confidence            345555544

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG1146|consensus

Probab=93.84  E-value=0.034  Score=50.94  Aligned_cols=54  Identities=19%  Similarity=0.359  Sum_probs=39.7

Q ss_pred             CCCccccCcCccccCChhHHHhHHhhhcC-------------------------CCCccCCCCCcccCCchhHHHHHhh
Q psy16147        136 GEGQFLCDQCDKVFAKHSSLARHKYEHSG-------------------------QRPYKCVECPKAFKHKHHLTEHKRL  189 (227)
Q Consensus       136 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------------~~~~~C~~C~~~f~~~~~l~~H~~~  189 (227)
                      -.+.++|+.|+..|.....|..|++.-+.                         .++|.|..|...++....|.+|+..
T Consensus       462 ~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            34678899999999999999999887221                         1457777777777777777777653

>KOG2893|consensus

Probab=93.43  E-value=0.024  Score=41.99  Aligned_cols=47  Identities=26%  Similarity=0.499  Sum_probs=33.3

Q ss_pred             cCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhccc
Q psy16147        169 KCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       169 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      .|..|.+.|....-|..|++.    +-|+|.+|.+..-+--.|..|-.+.|
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhh
Confidence            466788888888888877774    44788888777666666666665554

>KOG2785|consensus

Probab=92.24  E-value=0.45  Score=38.09  Aligned_cols=51  Identities=25%  Similarity=0.397  Sum_probs=35.3

Q ss_pred             ccCCCCCcccCCchhHHHHHhhccC-----------------------CCCccccccc---ccccCchhHHHhhhcc
Q psy16147        168 YKCVECPKAFKHKHHLTEHKRLHSG-----------------------EKPFQCCKCL---KRFSHSGSYSQHMNHR  218 (227)
Q Consensus       168 ~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~~  218 (227)
                      -.|..|+..+++...-..||..++|                       ...+.|-.|.   +.|.+....+.|+...
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K  243 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDK  243 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhc
Confidence            3577788777777777777777654                       1235677776   7777777778887644

>KOG2482|consensus

Probab=90.46  E-value=0.37  Score=37.95  Aligned_cols=24  Identities=25%  Similarity=0.621  Sum_probs=21.9

Q ss_pred             CcccCCcchhhhcChhHHHHHHHh
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      ..++|-.|.+.|..+.-|+.|||.
T Consensus       194 ~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHHh
Confidence            358899999999999999999986

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=90.13  E-value=0.58  Score=30.82  Aligned_cols=83  Identities=12%  Similarity=0.121  Sum_probs=47.0

Q ss_pred             CCccccCcCccccCChhHHHhHHhhhcCCC-CccCCCCCccc-------CCchhHHH------HHhhccCCCCccc----
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQR-PYKCVECPKAF-------KHKHHLTE------HKRLHSGEKPFQC----  198 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~~C~~C~~~f-------~~~~~l~~------H~~~h~~~~~~~C----  198 (227)
                      -+...|..|+.+... +++..|++..+... ...-..=...+       .....+..      -..--.....|.|    
T Consensus         9 ~~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~   87 (109)
T PF12013_consen    9 YRVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDP   87 (109)
T ss_pred             CCEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCC
Confidence            356789999998777 78899988443221 11000000000       00000000      0000001234899    


Q ss_pred             ccccccccCchhHHHhhhcccc
Q psy16147        199 CKCLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       199 ~~C~~~f~~~~~l~~H~~~~h~  220 (227)
                      ..|++.+.+...+.+|++..|.
T Consensus        88 ~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   88 PHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCCcEeccHHHHHHHHHHhcC
Confidence            9999999999999999998774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=90.09  E-value=0.23  Score=25.65  Aligned_cols=33  Identities=24%  Similarity=0.619  Sum_probs=19.7

Q ss_pred             cccCcCccccCChhHHHhHHhhhcCCCCccCCCCCccc
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAF  177 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  177 (227)
                      ..||.|+..|....+-     ...+....+|+.|+..|
T Consensus         3 i~CP~C~~~f~v~~~~-----l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK-----LPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             EECCCCCceEEcCHHH-----cccCCcEEECCCCCcEe
Confidence            3577777777666542     12234466777777665

>PF12907 zf-met2: Zinc-binding

Probab=89.58  E-value=0.13  Score=27.02  Aligned_cols=28  Identities=14%  Similarity=0.337  Sum_probs=21.5

Q ss_pred             ccccccccccc---CchhHHHhhhccccccc
Q psy16147        196 FQCCKCLKRFS---HSGSYSQHMNHRYSYCK  223 (227)
Q Consensus       196 ~~C~~C~~~f~---~~~~l~~H~~~~h~~~~  223 (227)
                      +.|.+|..+|.   +...|..|...+|+...
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~   32 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNT   32 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCC
Confidence            57889987665   45679999998888753

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=89.50  E-value=0.3  Score=25.08  Aligned_cols=33  Identities=18%  Similarity=0.555  Sum_probs=19.7

Q ss_pred             cccCcCccccCChhHHHhHHhhhcCCCCccCCCCCccc
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAF  177 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  177 (227)
                      ..|+.|+..|...++..     -......+|..|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~i-----p~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKI-----PPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHHC-----CCCCcEEECCCCCCEe
Confidence            45777777776665532     2233456777777655

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.19  E-value=0.35  Score=39.81  Aligned_cols=157  Identities=23%  Similarity=0.328  Sum_probs=72.7

Q ss_pred             CcccCCcchhhhcChhHHHHHHH--hcccc--ccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHH
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKY--EHSVL--QKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERK  115 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~--~h~~~--~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (227)
                      .++.|..|...|+....|..|.+  .|.++  ......+.     .|++.+.....+..+....................
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYS-----LCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSK  362 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeecc-----CCCccccccccccCCcccccCCCccccccccCccc
Confidence            35777777777777777777777  56555  22111111     46666666555544443333222111111111111


Q ss_pred             HhhhhhcCCCCcccccCCCCCCCcccc--CcCccccCChhHHHhHHhhhcCCC--CccCCCCCcccCCchhHHHHHhhcc
Q psy16147        116 LKSRLMMSSNGTMSCADDNSGEGQFLC--DQCDKVFAKHSSLARHKYEHSGQR--PYKCVECPKAFKHKHHLTEHKRLHS  191 (227)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~  191 (227)
                      ..........................+  ..|-..+.....+..|...+....  .+.+..|...+.....+..|++.|.
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (467)
T COG5048         363 FSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHT  442 (467)
T ss_pred             cccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccc
Confidence            000000000000000001111122223  224445555555555555554433  4566777788887777777777777


Q ss_pred             CCCCcccccc
Q psy16147        192 GEKPFQCCKC  201 (227)
Q Consensus       192 ~~~~~~C~~C  201 (227)
                      ...++.|..+
T Consensus       443 ~~~~~~~~~~  452 (467)
T COG5048         443 NHAPLLCSIL  452 (467)
T ss_pred             cCCceeeccc
Confidence            6665555443

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.00  E-value=0.17  Score=41.63  Aligned_cols=53  Identities=40%  Similarity=0.663  Sum_probs=44.6

Q ss_pred             CccCCCCCcccCCchhHHHHHh--hccCC--CCcccc--cccccccCchhHHHhhhccc
Q psy16147        167 PYKCVECPKAFKHKHHLTEHKR--LHSGE--KPFQCC--KCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h  219 (227)
                      ++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.+...+..|...+.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHT  347 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccccc
Confidence            5788888888888888888888  78888  888888  79999998888888888543

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.97  E-value=0.31  Score=32.01  Aligned_cols=31  Identities=23%  Similarity=0.598  Sum_probs=22.8

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHK  180 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  180 (227)
                      ...|+.||..|-...           ..|..|+.|+..|.-.
T Consensus         9 KR~Cp~CG~kFYDLn-----------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    9 KRTCPSCGAKFYDLN-----------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cccCCCCcchhccCC-----------CCCccCCCCCCccCcc
Confidence            457888888886642           3677888888888755

The function of members of this family is unknown.

>KOG2785|consensus

Probab=88.76  E-value=1.9  Score=34.72  Aligned_cols=52  Identities=21%  Similarity=0.347  Sum_probs=44.3

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCC-----------------------CCccCCCCC---cccCCchhHHHHHhh
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQ-----------------------RPYKCVECP---KAFKHKHHLTEHKRL  189 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  189 (227)
                      .|-.|-.|++.+.+......||..++|-                       ..+.|..|.   +.|.+....+.||..
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            4567999999999999999999988872                       237788888   999999999999885

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.59  E-value=0.34  Score=27.17  Aligned_cols=30  Identities=30%  Similarity=0.623  Sum_probs=26.3

Q ss_pred             CCCCCCCcccCCcchhhhcChhHHHHHHHh
Q psy16147         34 DDNSGEGQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      .+..||.-+.|+-||..|....+...|++.
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            345678889999999999999999999875

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=88.34  E-value=0.32  Score=22.95  Aligned_cols=9  Identities=33%  Similarity=0.789  Sum_probs=4.9

Q ss_pred             cCCCCCccc
Q psy16147        169 KCVECPKAF  177 (227)
Q Consensus       169 ~C~~C~~~f  177 (227)
                      .|+.||..|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            455555555

Several members are annotated as putative helicases.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=88.30  E-value=0.15  Score=38.14  Aligned_cols=13  Identities=15%  Similarity=0.283  Sum_probs=9.3

Q ss_pred             cccccccccccCc
Q psy16147        196 FQCCKCLKRFSHS  208 (227)
Q Consensus       196 ~~C~~C~~~f~~~  208 (227)
                      +.||.||++|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5788888777644

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.95  E-value=0.36  Score=24.41  Aligned_cols=9  Identities=22%  Similarity=1.010  Sum_probs=4.3

Q ss_pred             cccCcCccc
Q psy16147        140 FLCDQCDKV  148 (227)
Q Consensus       140 ~~C~~C~~~  148 (227)
                      |+|..||..
T Consensus         3 ~~C~~CG~i   11 (34)
T cd00729           3 WVCPVCGYI   11 (34)
T ss_pred             EECCCCCCE
Confidence            445555443

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.53  E-value=0.2  Score=28.07  Aligned_cols=28  Identities=29%  Similarity=0.586  Sum_probs=18.0

Q ss_pred             CCCCcccccccccccCchhHHHhhhccc
Q psy16147        192 GEKPFQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       192 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      |+--+.|+.|+..|.+..++.+|.+.-|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4444667777777777777777766444

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=87.06  E-value=0.42  Score=24.71  Aligned_cols=33  Identities=18%  Similarity=0.483  Sum_probs=17.5

Q ss_pred             cccCcCccccCChhHHHhHHhhhcCCCCccCCCCCccc
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAF  177 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  177 (227)
                      ..|+.|+..|....+...     .......|+.|+..|
T Consensus         3 ~~CP~C~~~~~v~~~~~~-----~~~~~v~C~~C~~~~   35 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQLG-----ANGGKVRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEEEeCHHHcC-----CCCCEEECCCCCCEE
Confidence            457777776665544211     112245677776655

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=86.65  E-value=1  Score=29.65  Aligned_cols=23  Identities=26%  Similarity=0.590  Sum_probs=15.8

Q ss_pred             ccC----CCCCcccCCchhHHHHHhhc
Q psy16147        168 YKC----VECPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       168 ~~C----~~C~~~f~~~~~l~~H~~~h  190 (227)
                      |.|    ..|++.+.+...+..|.+.+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~  107 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKE  107 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHh
Confidence            667    66777777777777776654

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=86.64  E-value=0.18  Score=37.65  Aligned_cols=43  Identities=21%  Similarity=0.360  Sum_probs=28.7

Q ss_pred             CccccCcCccccCChhHHHhHHhh---hc-------CCC-----CccCCCCCcccCCc
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYE---HS-------GQR-----PYKCVECPKAFKHK  180 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~---h~-------~~~-----~~~C~~C~~~f~~~  180 (227)
                      +...||+|+..|....-.....+.   ..       +.-     .+.|+.|++++...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            567899999999987554443332   11       111     26899999987755

>KOG2186|consensus

Probab=86.58  E-value=0.38  Score=36.22  Aligned_cols=46  Identities=22%  Similarity=0.631  Sum_probs=21.6

Q ss_pred             cccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHh
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKR  188 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  188 (227)
                      |.|..||-...-. .+..|+..-.+ ..|.|..|+..|.. ..+..|..
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            4555555543332 33445443333 44555555555554 34444444

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=85.35  E-value=0.53  Score=26.90  Aligned_cols=9  Identities=33%  Similarity=1.128  Sum_probs=4.5

Q ss_pred             ccccCcCcc
Q psy16147        139 QFLCDQCDK  147 (227)
Q Consensus       139 ~~~C~~C~~  147 (227)
                      .|.||.||.
T Consensus        27 ~F~CPnCGe   35 (61)
T COG2888          27 KFPCPNCGE   35 (61)
T ss_pred             EeeCCCCCc
Confidence            355555553

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=84.97  E-value=0.61  Score=33.15  Aligned_cols=23  Identities=30%  Similarity=0.613  Sum_probs=13.8

Q ss_pred             CccCCCCCcccCCchhHHHHHhhccCCCCccccccc
Q psy16147        167 PYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL  202 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  202 (227)
                      .|.|++||..+             .++-|..||+||
T Consensus       134 ~~vC~vCGy~~-------------~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYTH-------------EGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCcc-------------cCCCCCcCCCCC
Confidence            46777776543             234566777776

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.83  E-value=0.64  Score=24.99  Aligned_cols=26  Identities=31%  Similarity=0.494  Sum_probs=17.4

Q ss_pred             CCCcccCCcchhhhcCh----hHHHHHHHh
Q psy16147         38 GEGQFLCDQCDKVFAKH----SSLARHKYE   63 (227)
Q Consensus        38 ~~~~~~C~~C~~~f~~~----~~L~~H~~~   63 (227)
                      ++....|..|++.+...    .+|..|++.
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            45668899999988874    889999953

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=84.35  E-value=0.66  Score=32.97  Aligned_cols=24  Identities=29%  Similarity=0.782  Sum_probs=19.9

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPK  175 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  175 (227)
                      .|+|++||..             +.++-|.+|+.|+.
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCCC
Confidence            7999999986             34567899999994

>PHA00626 hypothetical protein

Probab=83.74  E-value=0.41  Score=26.93  Aligned_cols=14  Identities=21%  Similarity=0.548  Sum_probs=8.7

Q ss_pred             CCccCCCCCcccCC
Q psy16147        166 RPYKCVECPKAFKH  179 (227)
Q Consensus       166 ~~~~C~~C~~~f~~  179 (227)
                      ..|.|+.|++.|+.
T Consensus        22 nrYkCkdCGY~ft~   35 (59)
T PHA00626         22 DDYVCCDCGYNDSK   35 (59)
T ss_pred             cceEcCCCCCeech
Confidence            35677777766653

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.57  E-value=2.1  Score=28.20  Aligned_cols=77  Identities=17%  Similarity=0.256  Sum_probs=46.5

Q ss_pred             CccccCcCccccCChhHHHhHHhhhc--CCCC------------ccCCCCCcccCCchhHHHHHhhccCCCCcccccccc
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHS--GQRP------------YKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLK  203 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  203 (227)
                      -|..|++||........|.+.  .|+  .-++            ..|--|...|.......  ...-.....|.|+.|..
T Consensus        14 LP~~CpiCgLtLVss~HLARS--yHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~   89 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARS--YHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKN   89 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHh--hhccCCCcccccccccccCCCCcccCcCCCCCCccccc--ccccccccceeCCCCCC
Confidence            356788998887777776653  122  1111            23777888776543211  00011234588999988


Q ss_pred             cccCchhHHHhhhcc
Q psy16147        204 RFSHSGSYSQHMNHR  218 (227)
Q Consensus       204 ~f~~~~~l~~H~~~~  218 (227)
                      .|--.-+.-.|...|
T Consensus        90 ~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        90 VFCVDCDVFVHESLH  104 (112)
T ss_pred             ccccccchhhhhhcc
Confidence            888777777777644

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=82.12  E-value=1.1  Score=21.07  Aligned_cols=20  Identities=15%  Similarity=0.296  Sum_probs=16.5

Q ss_pred             ccCCcchhhhcChhHHHHHHH
Q psy16147         42 FLCDQCDKVFAKHSSLARHKY   62 (227)
Q Consensus        42 ~~C~~C~~~f~~~~~L~~H~~   62 (227)
                      ..|++|++.+ ....+..|+.
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            3699999998 6678888875

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=81.48  E-value=0.83  Score=28.39  Aligned_cols=31  Identities=23%  Similarity=0.595  Sum_probs=17.2

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFK  178 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  178 (227)
                      ..|.||.|++. ..       .+  .+...|.|..|+..|.
T Consensus        34 ~~~~Cp~C~~~-~V-------kR--~a~GIW~C~kCg~~fA   64 (89)
T COG1997          34 AKHVCPFCGRT-TV-------KR--IATGIWKCRKCGAKFA   64 (89)
T ss_pred             cCCcCCCCCCc-ce-------ee--eccCeEEcCCCCCeec
Confidence            34677777764 11       11  1234577777777665

>KOG4167|consensus

Probab=81.34  E-value=0.57  Score=40.75  Aligned_cols=27  Identities=41%  Similarity=0.661  Sum_probs=25.0

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      ...|.|..|++.|-...+++.||++|-
T Consensus       790 ~giFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  790 TGIFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             CceeehHHHHHHHHHHhhhhHHHHHHH
Confidence            577999999999999999999999984

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=81.26  E-value=0.92  Score=32.84  Aligned_cols=34  Identities=18%  Similarity=0.605  Sum_probs=23.4

Q ss_pred             CCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCC
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKH  179 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  179 (227)
                      ..-|.|+.|+..|.....+.         ..|.|+.|+.....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCee
Confidence            35577888888877776652         35788888866543

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=81.19  E-value=1.1  Score=31.74  Aligned_cols=34  Identities=15%  Similarity=0.411  Sum_probs=22.1

Q ss_pred             CCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccC
Q psy16147        136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFK  178 (227)
Q Consensus       136 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  178 (227)
                      ...-|.|+.|+..|+....+.         ..|.|+.||....
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEee
Confidence            345577777777777766653         2577777776543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=80.84  E-value=0.53  Score=26.30  Aligned_cols=13  Identities=23%  Similarity=0.713  Sum_probs=8.0

Q ss_pred             cccCcCccccCCh
Q psy16147        140 FLCDQCDKVFAKH  152 (227)
Q Consensus       140 ~~C~~C~~~f~~~  152 (227)
                      |.|..||..|...
T Consensus         6 y~C~~Cg~~fe~~   18 (52)
T TIGR02605         6 YRCTACGHRFEVL   18 (52)
T ss_pred             EEeCCCCCEeEEE
Confidence            5666666666544

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=80.57  E-value=1.3  Score=29.72  Aligned_cols=34  Identities=18%  Similarity=0.285  Sum_probs=23.7

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhH
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHL  183 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  183 (227)
                      +..|+.||..|-..           +..|..|+.|+..|.-...+
T Consensus         9 Kr~Cp~cg~kFYDL-----------nk~p~vcP~cg~~~~~~~~~   42 (129)
T TIGR02300         9 KRICPNTGSKFYDL-----------NRRPAVSPYTGEQFPPEEAL   42 (129)
T ss_pred             cccCCCcCcccccc-----------CCCCccCCCcCCccCcchhh
Confidence            45788888888654           33678888888887655333

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=80.53  E-value=0.18  Score=39.71  Aligned_cols=53  Identities=13%  Similarity=0.189  Sum_probs=29.6

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHHhccccccC-CCCCCCCCCCCCCCCCC
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKC-SSSYNYPRHSICNRPTA   87 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~-~~~~~~~~~~~c~~~~~   87 (227)
                      +.+.|..--|.||....+....+--|-++.+.|... ..-+....|++|.....
T Consensus        55 ddtDEen~~C~ICA~~~TYs~~~PC~H~~CH~Ca~RlRALY~~K~C~~CrTE~e  108 (493)
T COG5236          55 DDTDEENMNCQICAGSTTYSARYPCGHQICHACAVRLRALYMQKGCPLCRTETE  108 (493)
T ss_pred             cccccccceeEEecCCceEEEeccCCchHHHHHHHHHHHHHhccCCCccccccc
Confidence            334455567999999888887776555554433211 11223344566655443

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=80.37  E-value=0.51  Score=33.18  Aligned_cols=17  Identities=24%  Similarity=0.600  Sum_probs=11.3

Q ss_pred             CccCCCCCcccCCchhH
Q psy16147        167 PYKCVECPKAFKHKHHL  183 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l  183 (227)
                      .++|+.|++.|.....+
T Consensus        28 ~~~c~~c~~~f~~~e~~   44 (154)
T PRK00464         28 RRECLACGKRFTTFERV   44 (154)
T ss_pred             eeeccccCCcceEeEec
Confidence            46777777777765443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	227
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		9e-15
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-13
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		7e-12
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-11
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-11
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-11
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-11
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-11
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-11
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-11
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-10
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-10
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-10
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-08
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-08
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		7e-08
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		4e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		4e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-06
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		9e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-05
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-05
2em4_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-05
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-05
2ene_A	46	Solution Structure Of The C2h2 Type Zinc Finger (re		3e-05
2eor_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-05
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		7e-05
2ept_A	41	Solution Structure Of The First C2h2 Type Zinc Fing		8e-05
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-05
2ytg_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-05
2eqw_A	42	Solution Structure Of The 6th C2h2 Type Zinc Finger		1e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-04
2em2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2emm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2en0_A	42	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2en4_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2em1_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2ytm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2enh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2el5_A	42	Solution Structure Of The 18th Zf-C2h2 Domain From		3e-04
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2ytd_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2eq1_A	46	Solution Structure Of The 9th C2h2 Type Zinc Finger		4e-04
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-04
2eoe_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2ep3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2enf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2ytq_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2yti_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2yu8_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2eml_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2yrh_A	44	Solution Structure Of The C2h2-Type Zinc Finger Dom		6e-04
2ytn_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2emy_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2ytf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		9e-04
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04
2emc_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04
2eol_A	42	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 122 MSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKH 181
             S+ +++ A    GE  + C +C K F++   LA H+  H+G++PYKC EC K+F  K 
Sbjct: 4   FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63
Query: 182 HLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY 225
            LT H+R H+GEKP++C +C K FS   +   H    ++  KPY
Sbjct: 64  DLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR-THTGEKPY 106

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
           E  + C +C K F++ S+L +H+  H+G++PYKC EC K+F     L +H+R H+GEKP+
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 197 QCCKCLKRFSHSGSYSQHM 215
           +C +C K FS S   S+H 
Sbjct: 62  KCPECGKSFSRSDHLSRHQ 80

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH 190
           +  +SG+  + C QC K F   S   RH   H G RPY C  C K FK KHHL  H ++H
Sbjct: 2   SSGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 191 SGEKPFQCCKCLKRFSHSGSYSQHMN 216
           +G KP++C  C KRF    S+ +H+ 
Sbjct: 61  TGIKPYECNICAKRFMWRDSFHRHVT 86

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++  SL RH   H+GQ+P++C  C + F    HLT H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 203 KRFSHSGSYSQH 214
           ++F+ S    +H
Sbjct: 70  RKFARSDERKRH 81

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F+  S+L RH   H+GQ+P++C  C + F    HLT H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 203 KRFSHSGSYSQH 214
           ++F+ S    +H
Sbjct: 70  RKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++ + L RH   H+GQ+P++C  C + F    HLT H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 203 KRFSHSGSYSQH 214
           ++F+ S    +H
Sbjct: 70  RKFARSDERKRH 81

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++ + L RH   H+GQ+P++C  C + F    HLT H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 203 KRFSHSGSYSQH 214
           ++F+ S    +H
Sbjct: 70  RKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++   L RH   H+GQ+P++C  C + F    HLT H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 203 KRFSHSGSYSQH 214
           ++F+ S    +H
Sbjct: 70  RKFARSDERKRH 81

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++   L RH   H+GQ+P++C  C + F    HLT H R H+GEKPF C  C 
Sbjct: 9   ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 68
Query: 203 KRFSHSGSYSQH 214
           ++F+ S    +H
Sbjct: 69  RKFARSDERKRH 80

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++   L RH   H+GQ+P++C  C + F    HLT H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 203 KRFSHSGSYSQHM 215
           ++F+ S    +H 
Sbjct: 70  RKFARSDERKRHT 82

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
           +F+C  C + F K  +L  H+  H+ +RPY C  C KAF+ + HL +H+ +HS EKPF+C
Sbjct: 17  EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76
Query: 199 CKCLKRFSHSGSYSQH 214
            +C K F  S + + H
Sbjct: 77  QECGKGFCQSRTLAVH 92

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 134 NSGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHS 191
           ++GE  + CD   C++ F++   L RH+  H+G +P++C  C + F    HL  H R H+
Sbjct: 31  HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90
Query: 192 GEKPFQC--CKCLKRFSHSGSYSQHMN 216
           GEKPF C    C K+F+ S    +H N
Sbjct: 91  GEKPFSCRWPSCQKKFARSDELVRHHN 117

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++ CD+C K F+  S L++H+  H+G++PYKC EC KAF  + HL  H R+H+G  P
Sbjct: 18  RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 145 CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           C KV+ K S L  H   H+G++PYKC    C   F     LT H R H+G KPFQC  C 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 203 KRFSHSGSYSQHM 215
           + FS S   + HM
Sbjct: 83  RSFSRSDHLALHM 95

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++ ++L  H   H+GQ+P++C  C + F  +  L  H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICG 69
Query: 203 KRFSHSGSYSQH 214
           ++F+   + ++H
Sbjct: 70  RKFATLHTRTRH 81

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHS 191
           E  + C +C K F++ S L +H+  H+G++PYKC+EC KAF     L  H+R+H+
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
           +SG     C+ C K+F     L RHK  HSG++PY C  C   FK K  ++ H R H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 194 --KPFQCCKCLKRFSHSGSYSQHMNHRYS 220
             KP+ C  C K FS     + H+   +S
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC 199
           F C  C K F + S+L+ H   HS  RPY C  C K F  K  + +H  +H+GEKP +C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 200 KCLKRFSHSGSYSQH 214
            C K FS S +   H
Sbjct: 62  VCGKAFSQSSNLITH 76

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 121 MMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFK 178
           M   N  M       G    +C +C K F + S L RH+  H+G++P++C    C K F 
Sbjct: 16  MFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS 75
Query: 179 HKHHLTEHKRLHSGEKPFQCC--KCLKRFSHSGSYSQHM 215
              +L  H R+H+G++P+ C    C K+F+ S +   H+
Sbjct: 76  LDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++ ++L  H   H+GQ+P++C  C + F     L +H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICG 69
Query: 203 KRFSHSGSYSQH 214
           ++F+   +  +H
Sbjct: 70  RKFATLHTRDRH 81

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           + CD+C   F    +LA HK  H+G++PY+C  C   F    +L  H R+HSGEKP
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 145 CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           C K + K S L  H   H+G++PY C    C   F     LT H R H+G +PFQC KC 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 203 KRFSHSGSYSQHM 215
           + FS S   + HM
Sbjct: 74  RAFSRSDHLALHM 86

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 145 CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           C K + K S L  H   H+G++PY C    C   F     LT H R H+G +PFQC KC 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 203 KRFSHSGSYSQHM 215
           + FS S   + HM
Sbjct: 73  RAFSRSDHLALHM 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ 197
           G   C+ C K F++   L  H   H+G +PYKC  C  A      L +H R+HS E+PF+
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66
Query: 198 CCKCLKRFSHSGSYSQHM 215
           C  C     +S   + H+
Sbjct: 67  CQICPYASRNSSQLTVHL 84

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 142 CDQCDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQC- 198
           C +  K F     L  H   H+G++P+ C    C K F    +L  HKR H+GEKPF+C 
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 199 -CKCLKRFSHSGSYSQHM 215
              C +RF++S    +HM
Sbjct: 125 FEGCDRRFANSSDRKKHM 142

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 145 CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCK-- 200
           C   + K+  L  H  +H+G++P+ C E  C K F   HHLT H   H+GEK F C    
Sbjct: 11  CGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 70
Query: 201 CLKRFSHSGSYSQHMN 216
           C  RF+   +  +H N
Sbjct: 71  CDLRFTTKANMKKHFN 86

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           G   ++C  C + +   +SL RH   HS ++ Y C  C K F    + T+H+  H+GE+ 
Sbjct: 19  GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR 78
Query: 196 FQCCKCLKRFSHSGSYSQHM 215
           +QC  C K F +    S H+
Sbjct: 79  YQCLACGKSFINYQFMSSHI 98

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 160 YEHSGQRPYKC-VE-CPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
           Y     RPY C VE C + F     LT H R+H+G+KPFQC  C++ FS S   + H+
Sbjct: 12  YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 145 CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCK-- 200
           C   + K+  L  H  +H+G++P+ C E  C K F   HHLT H   H+GEK F C    
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 201 CLKRFSHSGSYSQHMN 216
           C  RF+   +  +H N
Sbjct: 80  CDLRFTTKANMKKHFN 95

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY+C EC KAF  K +LT+H+R+H+GEKP
Sbjct: 10  EKPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
           +P++C  C + F    HLT H R H+GEKPF C  C ++F+ S    +H
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 147 KVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQC--CKCL 202
           + F     L  H   H+G++P+KC    C K++    +L  H R H+GEKP+ C    C 
Sbjct: 47  RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCS 106
Query: 203 KRFSHSGSYSQHMNHRYSYCKPY 225
           K FS++   ++H N  +S  KPY
Sbjct: 107 KAFSNASDRAKHQNRTHSNEKPY 129

>pdb|2EM4|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 724- 756) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           QRPY+C+EC KAFK K  L  H+R H+GEKP
Sbjct: 10  QRPYECIECGKAFKTKSSLICHRRSHTGEKP 40

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEH-KRLHSG 192
           F+C+ C + FA+   L RH   H+ ++PY C  C +AF  +  L  H +++HSG
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC K F    HLT H R+H+GEKP
Sbjct: 10  EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|2ENE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (region 592- 624) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC K F+H  +L+ H+R+H+GEKP
Sbjct: 10  EKPYKCNECGKVFRHNSYLSRHQRIHTGEKP 40

>pdb|2EOR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 255- 287) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY C EC KAF H   L EH+R+H+GEKP
Sbjct: 10  EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           SG +PY C EC KAF+ K +L  H R H+GEKP
Sbjct: 6   SGVKPYGCSECGKAFRSKSYLIIHMRTHTGEKP 38

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH 190
           E  F C+ C K +   S L+RH+  H G RP  C EC K F+ +  +  H ++H
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|2EPT|A Chain A, Solution Structure Of The First C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           SGQR Y+C EC K+F+ K  LT H+R+H+G  P
Sbjct: 6   SGQRVYECQECGKSFRQKGSLTLHERIHTGSGP 38

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY+C EC KAF    HL +H+R+H+GEKP
Sbjct: 10  EKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40

>pdb|2YTG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 369- 401) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 26/31 (83%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++P+KC EC K++  + HLT+H+R+H+GEKP
Sbjct: 10  EKPFKCGECGKSYNQRVHLTQHQRVHTGEKP 40

>pdb|2EQW|A Chain A, Solution Structure Of The 6th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 484 Length = 42

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
           SG++PY C EC KAF  K H   H+R+H+GE
Sbjct: 6   SGEKPYVCTECGKAFIRKSHFITHERIHTGE 36

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHK-RLHSG 192
           N  E  F C  C + F +   L  H   H+G+ PYKC  C + F  K  L  H  +LHSG
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2EM2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 584- 616) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++P+KC EC KAF+   HL  H R+H+GEKP
Sbjct: 10  EKPFKCKECGKAFRQNIHLASHLRIHTGEKP 40

>pdb|2EMM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 544- 576) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           +RP+KC EC K+F    HL +H+R+H+GEKP
Sbjct: 10  ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY C EC K+F  K HL  H+R+H+GEKP
Sbjct: 10  EKPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC KAF     L  H+R+H+GEKP
Sbjct: 10  EKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2EN0|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 385- 413) Of Human Zinc Finger Protein 268 Length = 42

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
           SGQ+PY C EC KAF  K  L  H+R+H+GE
Sbjct: 6   SGQKPYVCNECGKAFGLKSQLIIHERIHTGE 36

>pdb|2EN4|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 284- 316) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           ++PYKC EC KAF+ + +LT H+ +H+GEK
Sbjct: 10  EKPYKCYECGKAFRTRSNLTTHQVIHTGEK 39

>pdb|2EM1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 637- 667) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           SG++PY C EC KAF  K  L  HK +H+G KP
Sbjct: 6   SGEKPYSCNECGKAFTFKSQLIVHKGVHTGVKP 38

>pdb|2YTM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 696- 728) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC+EC KAF      T+H+RLH+G++P
Sbjct: 10  EKPYKCMECGKAFGDNSSCTQHQRLHTGQRP 40

>pdb|2ENH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 556- 588) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY+C  C KAF H   LT+H+R+HSGEKP
Sbjct: 10  EKPYECDVCRKAFSHHASLTQHQRVHSGEKP 40

>pdb|2EL5|A Chain A, Solution Structure Of The 18th Zf-C2h2 Domain From Human Zinc Finger Protein 268 Length = 42

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
           SG+ PY+C EC KAF  K  L  H+R H+GE
Sbjct: 6   SGENPYECSECGKAFNRKDQLISHQRTHAGE 36

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           SG++PY C EC K F  K +L  H+R+H+GEK
Sbjct: 6   SGEKPYGCNECGKDFSSKSYLIVHQRIHTGEK 37

>pdb|2YTD|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 426- 458) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC KAF    HL EH+R+H+G +P
Sbjct: 10  EKPYKCSECGKAFHRHTHLNEHRRIHTGYRP 40

>pdb|2EQ1|A Chain A, Solution Structure Of The 9th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC KAF+   +LT H+ +H+GEKP
Sbjct: 10  EKPYKCNECGKAFRAHSNLTTHQVIHTGEKP 40

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           SG++PY+C EC K+F  +  L  H+RLH+G  P
Sbjct: 6   SGEKPYQCKECGKSFSQRGSLAVHERLHTGSGP 38

>pdb|2EOE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 508- 540) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC K F    HL  H+R+H+G KP
Sbjct: 10  EKPYKCNECGKVFTQNSHLANHQRIHTGVKP 40

>pdb|2EP3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 631- 663) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY+C EC KAF  + +L  H+++H+GEKP
Sbjct: 10  EKPYRCAECGKAFTDRSNLFTHQKIHTGEKP 40

>pdb|2ENF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 340- 372) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC K F    HL  H+ +H+GEKP
Sbjct: 10  EKPYKCNECGKVFTQNSHLVRHRGIHTGEKP 40

>pdb|2YTQ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 775- 807) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY C EC KAF  K +L  H R HSGEKP
Sbjct: 10  EKPYGCSECGKAFSSKSYLIIHMRTHSGEKP 40

>pdb|2YTI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 564- 596) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC K F    HL  H+ +H+GEKP
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40

>pdb|2YU8|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 648- 680) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC K F    HL  H+R+H+G KP
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRRVHTGGKP 40

>pdb|2EML|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 752- 784) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY+C  C KAF H+  L+ H+R+HSG+KP
Sbjct: 10  EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40

>pdb|2YRH|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (699- 729) From Zinc Finger Protein 473 Length = 44

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           SG++P  C EC K F+    L++H+R+HSGEKP
Sbjct: 6   SGKKPLVCNECGKTFRQSSCLSKHQRIHSGEKP 38

>pdb|2YTN|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 732- 764) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PYKC EC K F    HL  H+ +H+GEKP
Sbjct: 10  KKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++PY+C  C KAF  K HL +H++ H+GEKP
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

>pdb|2EMY|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 551- 583) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           + PY+C EC KAF  K+ L  H+R H+GEKP
Sbjct: 10  ENPYECHECGKAFSRKYQLISHQRTHAGEKP 40

>pdb|2YTF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 607- 639) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           ++P++C EC KAF  K +L  H+R H+GEKP
Sbjct: 10  EKPFECSECQKAFNTKSNLIVHQRTHTGEKP 40

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           +PY+C EC KAF     L  H+R+H+GEKP
Sbjct: 11  KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           +RPY C  C KAF  + +L +H+++H+GEKP
Sbjct: 10  ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|2EMC|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 641- 673) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           + P+KC EC K F H  HL++H+ +H+GE P
Sbjct: 10  EHPFKCNECGKTFSHSAHLSKHQLIHAGENP 40

>pdb|2EOL|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 581- 609) Of Human Zinc Finger Protein 268 Length = 42

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
           SG++PY+C +C KAF  K  L  H+R H+GE
Sbjct: 6   SGEKPYECTDCGKAFGLKSQLIIHQRTHTGE 36

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	227
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-25
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-16
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-25
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-21
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-25
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-19
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-23
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-23
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-22
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-22
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-22
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-21
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-21
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-21
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-17
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-14
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-20
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-15
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-16
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-16
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-15
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-15
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-15
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-15
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-15
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-15
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-15
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-15
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-15
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-15
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-14
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-14
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-14
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-14
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-14
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-14
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-14
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-14
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-14
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-14
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-14
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-14
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-14
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-14
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-14
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-14
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-14
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-14
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-14
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-14
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-14
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-14
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-14
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-14
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-12
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-12
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	4e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-12
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	8e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	8e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	3e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	4e-04

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 99.0 bits (248), Expect = 3e-27
 Identities = 27/81 (33%), Positives = 39/81 (48%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
              G   C+ C K F++   L  H   H+G +PYKC  C  A      L +H R+HS E+
Sbjct: 4   GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER 63

Query: 195 PFQCCKCLKRFSHSGSYSQHM 215
           PF+C  C     +S   + H+
Sbjct: 64  PFKCQICPYASRNSSQLTVHL 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 86.7 bits (216), Expect = 2e-22
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 142 CDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
           C  CD   A  SSL +H   HS +RP+KC  CP A ++   LT H R H+G+     
Sbjct: 39  CKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 76.3 bits (189), Expect = 2e-18
 Identities = 19/54 (35%), Positives = 27/54 (50%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
                P+KC  C K F  K  L  H R H+G KP++C  C    + S S ++H+
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL 56

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.4 bits (101), Expect = 7e-06
 Identities = 10/36 (27%), Positives = 11/36 (30%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           S E  F C  C       S L  H   H+G      
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 95.2 bits (238), Expect = 1e-25
 Identities = 31/81 (38%), Positives = 48/81 (59%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
             + +F+C  C + F K  +L  H+  H+ +RPY C  C KAF+ + HL +H+ +HS EK
Sbjct: 13  KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEK 72

Query: 195 PFQCCKCLKRFSHSGSYSQHM 215
           PF+C +C K F  S + + H 
Sbjct: 73  PFKCQECGKGFCQSRTLAVHK 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 84.4 bits (210), Expect = 2e-21
 Identities = 23/63 (36%), Positives = 29/63 (46%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
            E  + CD C K F +   L  H+Y HS ++P+KC EC K F     L  HK LH     
Sbjct: 42  DERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSS 101

Query: 196 FQC 198
              
Sbjct: 102 PTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 81.3 bits (202), Expect = 2e-20
 Identities = 15/62 (24%), Positives = 27/62 (43%)

Query: 153 SSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYS 212
           S  +  +     ++ + C  C + F   ++L  H+R H+ E+P+ C  C K F       
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62

Query: 213 QH 214
            H
Sbjct: 63  DH 64

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 40.5 bits (96), Expect = 4e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           S E  F C +C K F +  +LA HK  H        
Sbjct: 69  SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 94.0 bits (235), Expect = 2e-25
 Identities = 30/74 (40%), Positives = 39/74 (52%)

Query: 142 CDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC 201
           C  C K F + S+L+ H   HS  RPY C  C K F  K  + +H  +H+GEKP +C  C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 202 LKRFSHSGSYSQHM 215
            K FS S +   H 
Sbjct: 64  GKAFSQSSNLITHS 77

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 69.8 bits (172), Expect = 3e-16
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG 192
           S    + C  C K F + S + +H + H+G++P+KC  C KAF    +L  H R H+G
Sbjct: 25  SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 65.5 bits (161), Expect = 2e-14
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 168 YKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
           + C  C K+FK    L+ H  +HS  +P+ C  C KRF       +H 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT 49

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 93.7 bits (234), Expect = 5e-25
 Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           SG+  + C QC K F   S   RH   H G RPY C  C K FK KHHL  H ++H+G K
Sbjct: 6   SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64

Query: 195 PFQCCKCLKRFSHSGSYSQHM 215
           P++C  C KRF    S+ +H+
Sbjct: 65  PYECNICAKRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 84.0 bits (209), Expect = 2e-21
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
            G   + C  C K F     L  H   H+G +PY+C  C K F  +     H+ + S  K
Sbjct: 33  LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTK 90

Query: 195 PFQCCKCLKRFSHSGS 210
            ++  K  +  + +  
Sbjct: 91  SYEAAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 70.2 bits (173), Expect = 5e-16
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
            SG + Y C +C K+F HK     H  +H G +P+ C  C K+F        HM
Sbjct: 5   SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 57

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLT 184
           +G   + C+ C K F    S   H++  S  + Y+  +  +        +
Sbjct: 61  TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 92.9 bits (232), Expect = 7e-25
 Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE- 193
           SG     C+ C K+F     L RHK  HSG++PY C  C   FK K  ++ H R H G  
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62

Query: 194 -KPFQCCKCLKRFSHSGSYSQHM 215
            KP+ C  C K FS     + H+
Sbjct: 63  GKPYICQSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 78.7 bits (195), Expect = 2e-19
 Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMN-HRYS 220
            SG     C  C K F+  +HL  HK  HSGEKP+ C  C  RF      S H+  H  S
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 221 YCKPY 225
             KPY
Sbjct: 62  VGKPY 66

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 67.5 bits (166), Expect = 4e-15
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSG--QRPYKCVECPKAFKHKHHLTEH-KRLHS 191
           SGE  + C  C   F +   ++ H   H G   +PY C  C K F    HL  H K++HS
Sbjct: 31  SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

Query: 192 GEK 194
           G  
Sbjct: 91  GPS 93

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 91.0 bits (227), Expect = 3e-24
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 143 DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           + CD+ F++  SL RH   H+GQ+P++C  C + F    HLT H R H+GEKPF C  C 
Sbjct: 10  ESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69

Query: 203 KRFSHSGSYSQHM 215
           ++F+ S    +H 
Sbjct: 70  RKFARSDERKRHT 82

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           G+  F C  C + F++   L  H   H+G++P+ C  C + F        H ++H  +K
Sbjct: 31  GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 94.0 bits (235), Expect = 3e-24
 Identities = 33/79 (41%), Positives = 47/79 (59%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           GE  + C +C K F+    L RH+  H+G++PYKC EC K+F  + +L  H+R H+GEKP
Sbjct: 46  GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP 105

Query: 196 FQCCKCLKRFSHSGSYSQH 214
           + C +C K FS       H
Sbjct: 106 YACPECGKSFSQLAHLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 93.7 bits (234), Expect = 5e-24
 Identities = 35/79 (44%), Positives = 50/79 (63%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           GE  + C +C K F++   LA H+  H+G++PYKC EC K+F  K  LT H+R H+GEKP
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP 77

Query: 196 FQCCKCLKRFSHSGSYSQH 214
           ++C +C K FS   +   H
Sbjct: 78  YKCPECGKSFSQRANLRAH 96

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 93.3 bits (233), Expect = 6e-24
 Identities = 32/79 (40%), Positives = 49/79 (62%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           GE  + C +C K F++ ++L  H+  H+G++PY C EC K+F    HL  H+R H+GEKP
Sbjct: 74  GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP 133

Query: 196 FQCCKCLKRFSHSGSYSQH 214
           ++C +C K FS   +   H
Sbjct: 134 YKCPECGKSFSREDNLHTH 152

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 92.9 bits (232), Expect = 8e-24
 Identities = 32/79 (40%), Positives = 51/79 (64%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           GE  + C +C K F++ + L  H+  H+G++PYKC EC K+F  + +L  H+R H+GEKP
Sbjct: 102 GEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP 161

Query: 196 FQCCKCLKRFSHSGSYSQH 214
           ++C +C K FS   + + H
Sbjct: 162 YKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 82.5 bits (205), Expect = 7e-20
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 149 FAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHS 208
               SS         G++PY C EC K+F    HL EH+R H+GEKP++C +C K FS  
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 209 GSYSQH 214
              ++H
Sbjct: 63  KDLTRH 68

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.9 bits (188), Expect = 2e-17
 Identities = 24/60 (40%), Positives = 38/60 (63%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
           GE  + C +C K F++  +L  H+  H+G++PYKC EC K+F  +  L  H+R H+G+K 
Sbjct: 130 GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 50.9 bits (123), Expect = 3e-08
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 176 AFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
           +            L  GEKP+ C +C K FS S   ++H
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH 40

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 89.9 bits (224), Expect = 2e-23
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYE---HSGQRPYKCVECPKAFKHKHHLTEHKRLHSG 192
           GE  F C +C K + +  +L  H+     +  ++ + C  C + F+ +  L  H   H+G
Sbjct: 32  GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91

Query: 193 EKPFQCCKCLKRFSHSGSYSQHM 215
           E P++C  C ++F        HM
Sbjct: 92  EMPYKCSSCSQQFMQKKDLQSHM 114

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 88.7 bits (221), Expect = 6e-23
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRL---HS 191
           SG     C  C K F     L  H  +H+G++P++C +C K +  K +L EH+     + 
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

Query: 192 GEKPFQCCKCLKRFSHSGSYSQHM 215
            E+ F C  C + F        HM
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHM 86

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.5 bits (184), Expect = 2e-17
 Identities = 21/54 (38%), Positives = 29/54 (53%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
            SG    +C  C K F  K++L  H R H+GEKPF+C KC K +    +  +H 
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE 55

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 69.8 bits (172), Expect = 1e-15
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHK-RLHSGEK 194
            E  F C  C + F +   L  H   H+G+ PYKC  C + F  K  L  H  +LHSG  
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 86.4 bits (215), Expect = 2e-22
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC 199
           F C  C + F++   L  H   H+G++P+ C  C + F        H+ +     P    
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILED 62

Query: 200 KCLKRFSHSGSYSQHMNHR 218
           K  +  S +      +   
Sbjct: 63  KVEELLSKNYHLENEVARL 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
           +P++C  C + F    HLT H R H+GEKPF C  C ++F+ S    +H 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR 51

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHK---RLHSG 192
           GE  F CD C + FA+     RH+       P    +  +     +HL       +   G
Sbjct: 28  GEKPFACDICGRKFARSDERKRHRDIQ-HILPILEDKVEELLSKNYHLENEVARLKKLVG 86

Query: 193 EK 194
           E+
Sbjct: 87  ER 88

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 87.6 bits (218), Expect = 2e-22
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)

Query: 136 GEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
           GE  + CD   C++ F++   L RH+  H+G +P++C  C + F    HL  H R H+GE
Sbjct: 33  GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE 92

Query: 194 KPFQC--CKCLKRFSHSGSYSQHM 215
           KPF C    C K+F+ S    +H 
Sbjct: 93  KPFSCRWPSCQKKFARSDELVRHH 116

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 84.1 bits (209), Expect = 3e-21
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 135 SGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKC--VECPKAFKHKHHLTEHKRLH 190
           S +  F+C    C+K + K S L  H  +H+G++PY+C   +C + F     L  H+R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 191 SGEKPFQCCKCLKRFSHSGSYSQHM 215
           +G KPFQC  C ++FS S     H 
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHT 86

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC--VECPKAFKHKHHLTEHKRLH 190
           G   F C  C + F++   L  H   H+G++P+ C    C K F     L  H  +H
Sbjct: 63  GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 86.4 bits (215), Expect = 4e-22
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC--VECPKAFKHKHHLTEHKRLHSGE 193
           G    +C +C K F + S L RH+  H+G++P++C    C K F    +L  H R+H+G+
Sbjct: 31  GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90

Query: 194 KPFQCCK--CLKRFSHSGSYSQHM 215
           +P+ C    C K+F+ S +   H+
Sbjct: 91  RPYVCPFDGCNKKFAQSTNLKSHI 114

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 83.7 bits (208), Expect = 6e-21
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 142 CDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK- 200
              C K+F  +S++ +H + H G R + C EC KAF     L  H+ +H+GEKPFQC   
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFE 68

Query: 201 -CLKRFSHSGSYSQHM 215
            C KRFS   +   H+
Sbjct: 69  GCGKRFSLDFNLRTHV 84

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 136 GEGQFLC--DQCDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHS 191
           GE  F C  + C K F+   +L  H   H+G RPY C    C K F    +L  H   H+
Sbjct: 59  GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

Query: 192 GEKPFQ 197
             K  Q
Sbjct: 119 KAKNNQ 124

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 84.1 bits (209), Expect = 1e-21
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC--VECPKAFKHKHHLTEHKRLHSG 192
           +         C K + K S L  H   H+G++PY C    C   F     LT H R H+G
Sbjct: 3   TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG 62

Query: 193 EKPFQCCKCLKRFSHSGSYSQHM 215
            +PFQC KC + FS S   + HM
Sbjct: 63  HRPFQCQKCDRAFSRSDHLALHM 85

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 161 EHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK--CLKRFSHSGSYSQHM 215
           + +         C K +    HL  H R H+GEKP+ C    C  +F+ S   ++H 
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 135 SGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH 190
           +GE  + CD   C   FA+   L RH  +H+G RP++C +C +AF    HL  H + H
Sbjct: 31  TGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 83.6 bits (208), Expect = 2e-21
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query: 150 AKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSG 209
               S  R +++   +R YKC EC K+F H   L++H+R H+GEKP++C +C K F    
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60

Query: 210 SYSQH 214
               H
Sbjct: 61  HLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.0 bits (196), Expect = 1e-19
 Identities = 26/61 (42%), Positives = 39/61 (63%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
              ++ CD+C K F+  S L++H+  H+G++PYKC EC KAF  + HL  H R+H+G  P
Sbjct: 15  ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

Query: 196 F 196
            
Sbjct: 75  S 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYK 169
           GE  + CD+C K F + S L  H   H+G  P  
Sbjct: 43  GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 85.7 bits (213), Expect = 4e-21
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 135 SGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLH 190
               +++C    C   + K+  L  H  +H+G++P+ C E  C K F   HHLT H   H
Sbjct: 8   VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH 67

Query: 191 SGEKPFQC--CKCLKRFSHSGSYSQHM 215
           +GEK F C    C  RF+   +  +H 
Sbjct: 68  TGEKNFTCDSDGCDLRFTTKANMKKHF 94

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 78.8 bits (195), Expect = 2e-18
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 142 CDQCDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSG---EKPF 196
            + C K F KH+ L  H++ H+ Q PY+C    C K F     L  H+++H+G   +K  
Sbjct: 109 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 168

Query: 197 QCCKCLKRFSHSGSYSQHM 215
            C    K ++    Y +H+
Sbjct: 169 SCSFVGKTWTL---YLKHV 184

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 75.7 bits (187), Expect = 3e-17
 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 136 GEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHS 191
           GE  F C +  C+K F     L RH   H+G++ + C    C   F  K ++ +H     
Sbjct: 39  GEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH 98

Query: 192 GEK--PFQCCK--CLKRFSHSGSYSQHM 215
             K   + C    C K F        H 
Sbjct: 99  NIKICVYVCHFENCGKAFKKHNQLKVHQ 126

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 158 HKYEHSGQRPYKC--VECPKAFKHKHHLTEHKRLHSGEKPFQC--CKCLKRFSHSGSYSQ 213
            K      + Y C   +C  A+     L  H   H+GEKPF C    C K F+     ++
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 214 HM 215
           H 
Sbjct: 63  HS 64

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 53.0 bits (128), Expect = 6e-09
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 136 GEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKR 188
            +  + C    CDK F+  S L RH+  H+G    K   C    K      +H  
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 185

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 82.1 bits (204), Expect = 7e-21
 Identities = 20/63 (31%), Positives = 33/63 (52%)

Query: 153 SSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYS 212
                H +     +PYKC  C  +F++K +L  HK +H+GEKP++C  C  +F+   +  
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 213 QHM 215
            H 
Sbjct: 63  THT 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 79.8 bits (198), Expect = 4e-20
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
            +  + CD+C   F    +LA HK  H+G++PY+C  C   F    +L  H R+HSGEKP
Sbjct: 14  SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

Query: 196 F 196
           +
Sbjct: 74  Y 74

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 83.9 bits (208), Expect = 1e-20
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 11/104 (10%)

Query: 123 SSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYK---------CVEC 173
                +SC   +  +       CD+ F+    L  H        P +         C   
Sbjct: 9   PIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPRE 68

Query: 174 PKAFKHKHHLTEHKRLHSGEKPFQC--CKCLKRFSHSGSYSQHM 215
            K+FK K+ L  H R+H+GEKPF C    C K F+ S +   H 
Sbjct: 69  GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK 112

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 81.9 bits (203), Expect = 6e-20
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 142 CDQCDKVFAKHSSLARHKYEHSGQRPYKC--VECPKAFKHKHHLTEHKRLHSGEKPFQCC 199
           C +  K F     L  H   H+G++P+ C    C K F    +L  HKR H+GEKPF+C 
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124

Query: 200 K--CLKRFSHSGSYSQHM 215
              C +RF++S    +HM
Sbjct: 125 FEGCDRRFANSSDRKKHM 142

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 66.9 bits (164), Expect = 3e-14
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)

Query: 135 SGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLH 190
           +GE  F C    C K+FA+  +L  HK  H+G++P+KC    C + F +     +H  +H
Sbjct: 86  TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

Query: 191 SGEKPFQCC 199
           + +K     
Sbjct: 146 TSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 65.8 bits (161), Expect = 6e-14
 Identities = 13/80 (16%), Positives = 18/80 (22%), Gaps = 9/80 (11%)

Query: 145 CDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ------- 197
                         K+    Q       C + F   H L  H  +     P Q       
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 198 --CCKCLKRFSHSGSYSQHM 215
             C +  K F        H+
Sbjct: 63  EECPREGKSFKAKYKLVNHI 82

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.1 bits (110), Expect = 9e-07
 Identities = 5/45 (11%), Positives = 11/45 (24%)

Query: 172 ECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMN 216
               + +        K +   +       C + FS       H+ 
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVT 46

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 81.4 bits (202), Expect = 1e-20
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 135 SGEGQFLCD--QCDKVFAKHSSLARHK-YEHSGQRPYKCVE--CPKAFKHKHHLTEHKRL 189
           SG     CD   C ++F+    L  HK Y+H  Q+ + C E  C K+F  K HL EH +L
Sbjct: 3   SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL 62

Query: 190 HSGEKPFQCCKCLKRF 205
           HS  + + C       
Sbjct: 63  HSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 65.6 bits (161), Expect = 1e-14
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 162 HSGQRPYKC--VECPKAFKHKHHLTEHKRL-HSGEKPFQC--CKCLKRFSHSGSYSQHM 215
            SG     C    C + F ++ +L  HK+  H  +K F C    C K F+      +HM
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 81.1 bits (201), Expect = 2e-20
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 142 CDQCDKVFAKHSSLARHKYEHSGQRPYKC--VECPKAFKHKHHLTEHKRLHSGEKPFQCC 199
            + C K F KH+ L  H++ H+ Q PY+C    C K F     L  H+++H+G    +  
Sbjct: 6   FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65

Query: 200 KCLKRFSHSGSYSQHMNHR 218
            C         Y +H+   
Sbjct: 66  SCSFVGKTWTLYLKHVAEC 84

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 54.2 bits (131), Expect = 3e-10
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 136 GEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHK-HHLTEHKRLH 190
            +  + C    CDK F+  S L RH+  H+G    K   C    K    +L      H
Sbjct: 28  QQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 80.6 bits (200), Expect = 3e-20
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 4/74 (5%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSG----QRPYKCVECPKAFKHKHHLTEHKRLHS 191
           GE  + C  CDK F +   L  H   +         + C +C K F  ++ +  H    +
Sbjct: 12  GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA 71

Query: 192 GEKPFQCCKCLKRF 205
           G    +        
Sbjct: 72  GPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 72.9 bits (180), Expect = 2e-17
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 154 SLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE----KPFQCCKCLKRFSHSG 209
           S       H+G++PY C  C K F+ K  L  H + +         F C KC K F+   
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 210 SYSQHM 215
           + ++H 
Sbjct: 62  TMARHA 67

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 82.3 bits (204), Expect = 4e-20
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 9/101 (8%)

Query: 135 SGEGQFLCDQCD-----KVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHK 187
               +F+C         + F     L  H   H+G++P+KC    C K++    +L  H 
Sbjct: 30  GERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHL 89

Query: 188 RLHSGEKPFQC--CKCLKRFSHSGSYSQHMNHRYSYCKPYR 226
           R H+GEKP+ C    C K FS++   ++H N  +S  KPY 
Sbjct: 90  RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYV 130

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 80.3 bits (199), Expect = 3e-19
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 10/86 (11%)

Query: 140 FLCDQCDKVFAKHSSLARH---KYEHSGQRPYKCVEC-----PKAFKHKHHLTEHKRLHS 191
              D C + F     L  H   ++ H  ++ + C         + FK ++ L  H R H+
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 192 GEKPFQC--CKCLKRFSHSGSYSQHM 215
           GEKP +C    C K +S   +   H+
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHL 89

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.6 bits (184), Expect = 4e-17
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 135 SGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHK-RL 189
           +GE    C    C K +++  +L  H   H+G++PY C    C KAF +     +H+ R 
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122

Query: 190 HSGEKPFQC--CKCLKRFSHSGSYSQHM 215
           HS EKP+ C    C KR++   S  +H+
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHV 150

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 55.3 bits (134), Expect = 5e-10
 Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 8/58 (13%)

Query: 166 RPYKCVECPKAFKHKHHLTEH---KRLHSGEKPFQC-----CKCLKRFSHSGSYSQHM 215
              +   C + F  +  L  H   + +H   K F C      + L+ F        HM
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM 59

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 54.9 bits (133), Expect = 7e-10
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 136 GEGQFLCDQ--CDKVFAKHSSLARHKYE-HSGQRPYKC--VECPKAFKHKHHLTEHKRLH 190
           GE  ++C+   C K F+  S  A+H+   HS ++PY C    C K +     L +H +  
Sbjct: 94  GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

Query: 191 SG 192
            G
Sbjct: 154 HG 155

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 80.4 bits (199), Expect = 6e-20
 Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 145 CDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL 202
           C KV+ K S L  H   H+G++PYKC    C   F     LT H R H+G KPFQC  C 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82

Query: 203 KRFSHSGSYSQHM 215
           + FS S   + HM
Sbjct: 83  RSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 135 SGEGQFLC--DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH 190
           +GE  + C  + CD  FA+   L RH  +H+G +P++C  C ++F    HL  H + H
Sbjct: 41  TGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 149 FAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC--KCLKRFS 206
                     +  H    P     C K +    HL  H R H+GEKP++C    C  RF+
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 207 HSGSYSQHM 215
            S   ++H 
Sbjct: 59  RSDELTRHY 67

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.1 bits (196), Expect = 1e-19
 Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 154 SLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE--KPFQCCKCLKRFSHSGSY 211
           S       HSG++PY+C  C   F     +  H      E    F C  C    +     
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 212 SQHMNHRYSYCKPY 225
             H+  ++SY  P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSG--QRPYKCVECPKAFKHKHHLTEH-KRLHS 191
           SGE  + C  C   F +  ++  H  +        + C  C      K  L  H ++ HS
Sbjct: 11  SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS 70

Query: 192 GEKPF 196
              P 
Sbjct: 71  YSGPS 75

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 78.7 bits (195), Expect = 1e-19
 Identities = 26/60 (43%), Positives = 37/60 (61%)

Query: 155 LARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
            +     HSG++PY CVEC KAF     L +H+R+H+GEKP++C +C K FS +     H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 77.9 bits (193), Expect = 2e-19
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           SGE  + C +C K F++ S L +H+  H+G++PYKC+EC KAF     L  H+R+H+   
Sbjct: 10  SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69

Query: 195 PF 196
             
Sbjct: 70  SS 71

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 77.5 bits (192), Expect = 3e-19
 Identities = 15/65 (23%), Positives = 26/65 (40%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           S      C +C    +  ++L  H+  H   RP+KC  C    K   +L++H +   G+ 
Sbjct: 5   SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64

Query: 195 PFQCC 199
                
Sbjct: 65  SGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 74.1 bits (183), Expect = 7e-18
 Identities = 18/54 (33%), Positives = 26/54 (48%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
            S   P KC EC  +   K  L  H+R+H  ++PF+C  C        + S+HM
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM 57

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 6/28 (21%), Positives = 9/28 (32%)

Query: 188 RLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
              S   P +C +C    S   +   H 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHE 29

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 69.8 bits (172), Expect = 2e-16
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
           R + C  C +AF  + HL  H R H+ EKP+ C  C + F+      +H 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 68.7 bits (169), Expect = 5e-16
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEH-KRLHSGEK 194
           F+C+ C + FA+   L RH   H+ ++PY C  C +AF  +  L  H +++HSG  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 3e-16
 Identities = 19/45 (42%), Positives = 25/45 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  SG++PYKC EC KAF    HL EH+R+H+G +P     
Sbjct: 1   GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 7e-06
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  + C +C K F +H+ L  H+  H+G RP   
Sbjct: 8   SGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKP++C +C K F      ++H
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEH 31

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 6e-16
 Identities = 17/45 (37%), Positives = 22/45 (48%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G +PY C EC KAF     LT H+ +H+GEKP     
Sbjct: 1   GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 12/35 (34%), Positives = 22/35 (62%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           G   ++C++C K F+ +SSL  H+  H+G++P   
Sbjct: 9   GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G KP+ C +C K FS   S + H
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTH 31

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 68.7 bits (169), Expect = 6e-16
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKR--LHSGEKPFQCCKCLKRFSHSGSYSQHM 215
             G+  Y+C  C + + H  +   H         K + C  C K F+   + + H+
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHK--YEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG 192
           GE  + C  C +V+   S+  RH         + Y C  C K F  K ++T H ++   
Sbjct: 7   GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 187 KRLHSGEKPFQCCKCLKRFSHSGSYSQHM-NHRYSYCKPYR 226
           +    GE  ++C  C + ++H  ++ +H         K Y 
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYP 42

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 1e-15
 Identities = 20/43 (46%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  SG++PYKC EC K F    HLT H R+H+GEKP   
Sbjct: 1   GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           SGE  + C++C KVF ++S L  H   H+G++P     
Sbjct: 8   SGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKP++C +C K F+ +   + H
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNH 31

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 67.2 bits (165), Expect = 2e-15
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEH-KRLHSGEKPFQCCKCLKRFS 206
            S  +PY C  C K F    HL  H K++H+ E+P +C   +   S
Sbjct: 7   GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 48.0 bits (115), Expect = 3e-08
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARH-KYEHSGQRPYKCVECPKAF 177
           S    ++C  C K F++   L  H K  H+ +RP+KC       
Sbjct: 8   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY 225
                S  KP+ C  C K FS     + H+   ++  +P+
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH 42

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.3 bits (163), Expect = 3e-15
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++PYKC EC K F+   HL  H+ +H+GEKP     
Sbjct: 1   GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C KVF ++S LARH+  H+G++P   
Sbjct: 9   GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F  +   ++H
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARH 31

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 3e-15
 Identities = 19/43 (44%), Positives = 25/43 (58%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  SG++P+KC EC KAF+   HL  H R+H+GEKP   
Sbjct: 1   GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  F C +C K F ++  LA H   H+G++P   
Sbjct: 8   SGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKPF+C +C K F  +   + H
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASH 31

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 4e-15
 Identities = 18/45 (40%), Positives = 24/45 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++PYKC EC KAF+ +  L  H+  HSGEKP     
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C K F   SSLA H+  HSG++P   
Sbjct: 9   GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F    S + H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 5e-15
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY+C  C KAF  K HL +H++ H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C  C K F+     +QH
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           GE  + C  C K F + + LA+H+  H+G++P     
Sbjct: 9   GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 66.0 bits (162), Expect = 5e-15
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++ YKC EC K F     L++H+++H+GEKP   
Sbjct: 1   GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 26/35 (74%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE ++ C++C KVF+++S L++H+  H+G++P   
Sbjct: 9   GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEK ++C +C K FS +   SQH
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQH 31

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 5e-15
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PYKC  C KAF+   HL +H  +HSGE+P   
Sbjct: 1   GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-06
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C  C K F   S L +H   HSG+RP   
Sbjct: 9   GEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 +GEKP++C  C K F  S    QH
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 5e-15
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++PYKC EC KAF+   +LT H+ +H+GEKP     
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C K F  HS+L  H+  H+G++P   
Sbjct: 9   GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F    + + H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTH 31

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 5e-15
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY+C EC KAF  K +LT+H+R+H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 22/35 (62%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C K FA+ ++L +H+  H+G++P   
Sbjct: 9   GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F+   + +QH
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQH 31

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 5e-15
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G+RP+KC EC K+F    HL +H+R+H+GEKP     
Sbjct: 1   GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE    C++C K F + + L +H+  H+G++P   
Sbjct: 9   GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 5e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GE+P +C +C K F  S    QH
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQH 31

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 5e-15
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++P+KC EC K++  + HLT+H+R+H+GEKP     
Sbjct: 1   GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  F C +C K + +   L +H+  H+G++P   
Sbjct: 9   GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKPF+C +C K ++     +QH
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQH 31

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 6e-15
 Identities = 19/45 (42%), Positives = 26/45 (57%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++PY+C  C KAF H   LT+H+R+HSGEKP     
Sbjct: 1   GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + CD C K F+ H+SL +H+  HSG++P   
Sbjct: 9   GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C  C K FSH  S +QH
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQH 31

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 6e-15
 Identities = 19/43 (44%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY C EC KAF  K +L  H R HSGEKP   
Sbjct: 1   GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP+ C +C K FS       H
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIH 31

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           +GE  + C +C K F+  S L  H   HSG++P   
Sbjct: 8   AGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 7e-15
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++PY+C +C KAF  +  LT H+ +H+G+KP     
Sbjct: 1   GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C+QC K F+  SSL  H+  H+G++P   
Sbjct: 9   GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K FS   S + H
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTH 31

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 65.3 bits (160), Expect = 7e-15
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +GQRPY+C+EC KAFK K  L  H+R H+GEKP   
Sbjct: 1   GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           G+  + C +C K F   SSL  H+  H+G++P     
Sbjct: 9   GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G++P++C +C K F    S   H
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICH 31

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 65.3 bits (160), Expect = 8e-15
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY C EC K+F+    L +H+R+HSGEKP   
Sbjct: 1   GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 41.4 bits (98), Expect = 5e-06
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           +GE  + C +C K F   S L +H+  HSG++P     
Sbjct: 8   TGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP+ C +C K F  +    +H
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKH 31

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 8e-15
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++PYKC +C K +  K +L  H+++H+GE+P     
Sbjct: 1   GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 45

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 9e-06
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C K +    +L  H+  H+G+RP   
Sbjct: 9   GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C KC K ++   +   H
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 8e-15
 Identities = 17/43 (39%), Positives = 19/43 (44%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  SG+RPY C EC K F    HL EH + H  EK    
Sbjct: 1   GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  + C++C K F +HS L  H   H  ++    
Sbjct: 8   SGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
                SGE+P+ C +C K F       +H+
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHL 32

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 1e-14
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY+C  C KAF H+  L+ H+R+HSG+KP   
Sbjct: 1   GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C  C K FSH  S S H
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVH 31

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C  C K F+   SL+ H+  HSG++P   
Sbjct: 9   GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 1e-14
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 +G++PY C EC KAF H   L EH+R+H+GEKP   
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP+ C +C K F H     +H
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEH 31

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C K F   S L  H+  H+G++P   
Sbjct: 9   GEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 1e-14
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PYKC  C K+F++   LT H+R+H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           GE  + CD C K F   SSL  H+  H+G++P     
Sbjct: 9   GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C  C K F +  S + H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 1e-14
 Identities = 19/43 (44%), Positives = 22/43 (51%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  SG+RP+KC EC K F  + HL  H RLHS EK    
Sbjct: 1   GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  F C++C K F + S LA H   HS ++    
Sbjct: 8   SGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGE+PF+C +C K F      + H
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGH 31

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 1e-14
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G+ PY+C EC KAF  K+ L  H+R H+GEKP   
Sbjct: 1   GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GE P++C +C K FS       H
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISH 31

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C K F++   L  H+  H+G++P   
Sbjct: 9   GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 1e-14
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY C  C KAF    HL +H R+H+ E     
Sbjct: 1   GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
                 +GEKP+ C  C K F  S   +QH+
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHL 32

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C+ C K F   + L +H   H+ +     
Sbjct: 9   GEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 64.4 bits (158), Expect = 2e-14
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G +PY C EC KAF+ K +L  H R H+GE     
Sbjct: 1   GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           G   ++C++C K F   S L  H   H+G+     
Sbjct: 9   GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G KP+ C +C K F        H
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIH 31

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 2e-14
 Identities = 17/45 (37%), Positives = 23/45 (51%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  SG++P+KC EC K F     L  H+R+H+GEKP     
Sbjct: 1   GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKPF+C +C KRF+ +     H
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  F C++C K F ++S L  H+  H+G++P   
Sbjct: 8   SGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G +PY C +C K F  K  L  H+R H+G KP   
Sbjct: 1   GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G KP+ C +C K FS       H
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           G   + C QC K F+  S L  H+  H+G +P   
Sbjct: 9   GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 +G++PYKC EC K F+H  +L+ H+R+H+GEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           GE  + C++C KVF  +S L+RH+  H+G++P     
Sbjct: 9   GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F H+   S+H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRH 31

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++P+ C++C KAF     L +H+R+H+GEKP   
Sbjct: 1   GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  F C  C K F+ H  L +H+  H+G++P   
Sbjct: 9   GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKPF C  C K FS     +QH
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQH 31

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY+C EC KAF    HL +H+R+H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K FS +    QH
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQH 31

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C K F++ + L +H+  H+G++P   
Sbjct: 9   GEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  SG++P++C EC K F    HL  H+R+H+GEKP   
Sbjct: 1   GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 SGEKPFQC +C KRF+ +     H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSH 31

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  F C++C K F ++S L  H+  H+G++P   
Sbjct: 8   SGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++P+KC  C K+F  +  L  H  +H+ EKP   
Sbjct: 1   GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  F CD C K F   S L RH   H+ ++P   
Sbjct: 9   GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKPF+C  C K F      ++H
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRH 31

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  S ++PYKC +C K +  + +L  H+R+H GEK      
Sbjct: 1   GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           S E  + C+ C K + +  +L  H+  H G++    
Sbjct: 8   SVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                S EKP++C  C K ++   +   H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY C EC K+F  K HL  H+R+H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           GE  ++C++C K F + S L RH+  H+G++P     
Sbjct: 9   GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 9e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP+ C +C K F      ++H
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRH 31

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.0 bits (157), Expect = 3e-14
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++P++C EC KAF  K +L  H+R H+GEKP   
Sbjct: 1   GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKPF+C +C K F+   +   H
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVH 31

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  F C +C K F   S+L  H+  H+G++P   
Sbjct: 9   GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 3e-14
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                   G++ YKC  C K F    HL  H+R+H+GEKP   
Sbjct: 1   GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + CD C K F++ S L  H+  H+G++P   
Sbjct: 9   GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 GEK ++C  C K FS S     H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 64.6 bits (158), Expect = 3e-14
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 152 HSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSG 209
           H       Y     RPY C    C + F     LT H R+H+G+KPFQC  C++ FS S 
Sbjct: 4   HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63

Query: 210 SYSQHM 215
             + H+
Sbjct: 64  HLTTHI 69

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 136 GEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHS 191
               + C    CD+ F++   L RH   H+GQ+P++C  C + F    HLT H R H+
Sbjct: 16  KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 3e-14
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 +G++PYKC EC K F    HL  H+ +H+GEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C KVF ++S L RH+  H+G++P   
Sbjct: 9   GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F+ +    +H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRH 31

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.8 bits (156), Expect = 3e-14
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++PYKC+EC KAF      T+H+RLH+G++P     
Sbjct: 1   GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F  + S +QH
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQH 31

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C K F  +SS  +H+  H+GQRP   
Sbjct: 9   GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 64.3 bits (157), Expect = 3e-14
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHS---GEKPFQCCKCLKRFSHSGSYSQHM 215
            SG    +C  C    + K  L  H+R H+       F C  C KRF    S + H 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 64.3 bits (157), Expect = 4e-14
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 3/76 (3%)

Query: 134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHS---GQRPYKCVECPKAFKHKHHLTEHKRLH 190
           +SG     C+ C     + +SL  H+ +H+       + C  C K F+    +  H+   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 191 SGEKPFQCCKCLKRFS 206
                    +     S
Sbjct: 62  HPALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 10/43 (23%), Positives = 16/43 (37%)

Query: 133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPK 175
           +     +F C+ C K F K  S+A H+ +          E   
Sbjct: 32  ETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.3 bits (155), Expect = 4e-14
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                   G+R ++C +C K F    +  +H+R+H+GEKP   
Sbjct: 1   GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 GE+  +C  C K F  + ++ QH
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQH 31

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
            GE    C  C K F + S+  +H+  H+G++P   
Sbjct: 8   HGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.3 bits (155), Expect = 4e-14
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PYKC EC K F  +  L  H  +H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C K F     L  H   H+G++P   
Sbjct: 9   GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F        H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTH 31

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 4e-14
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G+R Y+C EC KAF  K  L  H+R+H+GEKP   
Sbjct: 1   GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 7/30 (23%), Positives = 14/30 (46%)

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 +GE+ ++C +C K F+   +   H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMH 31

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C K FA+ S+L  H+  H+G++P   
Sbjct: 9   GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 4e-14
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PYKC EC K F    HL  H+ +H+GEKP   
Sbjct: 1   GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 24/35 (68%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           G+  + C++C KVF ++S LARH+  H+G++P   
Sbjct: 9   GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 5e-05
 Identities = 8/29 (27%), Positives = 17/29 (58%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G+KP++C +C K F+ +   ++H
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARH 31

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 63.3 bits (155), Expect = 4e-14
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +GQ+P++C  C K+F+ K +L  H+R+H+GEK    
Sbjct: 1   GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           G+  F C  C K F    +L  H+  H+G++    
Sbjct: 9   GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G+KPF+C  C K F   G+   H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 4e-14
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 +G++PYKC EC K F    HL  H+R+H+G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C KVF ++S LA H+  H+G +P   
Sbjct: 9   GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F+ +   + H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANH 31

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                 +G++P++C EC K+F     L  H+R+H+GE P     
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP +C +C K FS +     H
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVH 31

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE    C +C K F+ +S L  H+  H+G+ P   
Sbjct: 9   GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PYKC EC K F    HL  H+ +H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 7e-06
 Identities = 15/35 (42%), Positives = 24/35 (68%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C KVF ++S LARH+  H+G++P   
Sbjct: 9   GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F+ +   ++H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G + ++C EC KAF  K  L+ H+++H+GEKP     
Sbjct: 1   GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G K F+C +C K F+   + S H
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMH 31

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           G   F C +C K F + S+L+ H+  H+G++P   
Sbjct: 9   GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++ +KC EC K F     LT H+R+H+GEKP   
Sbjct: 1   GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 13/36 (36%), Positives = 22/36 (61%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           +G+  F C++C K F + SSL  H+  H+G++P   
Sbjct: 8   AGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G+K F+C +C K F+ S S + H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++P+KCVEC K F  +  L  H +LH+GEKP   
Sbjct: 1   GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKPF+C +C K FS   + + H
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVH 31

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  F C +C K F++ S+L  H   H+G++P   
Sbjct: 9   GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                SG++PY C EC K F  K  L+ H+R H+GEKP   
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           SGE  + C++C K F++ S L+ H+  H+G++P     
Sbjct: 8   SGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKP+ C +C K FS     S H
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAH 31

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 +G++PYKC EC KAF     L  H+R+H+GEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C K F++ S LARH+  H+G++P   
Sbjct: 9   GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K FS +   ++H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARH 31

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 5e-14
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                   G++PY+C EC K+F   + LT+H   H+ EKP   
Sbjct: 1   GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
            GE  + C +C K F+    L +H   H+ ++P   
Sbjct: 8   EGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 GEKP+QC +C K FS S   +QH
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQH 31

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 6e-14
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  SG++PY+C EC K F    HL +HKR+H+GE+    
Sbjct: 1   GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE 172
           SG+  + C +C K F +   L +HK  H+G+R      
Sbjct: 8   SGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SG+KP++C +C K F   G  +QH
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQH 31

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 7e-14
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PYKC +C KAF  K  L  H++ H+GE+    
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C  C K F + S L  H+  H+G+R    
Sbjct: 9   GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C  C K F+       H
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.5 bits (153), Expect = 7e-14
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  SG++PY+C EC KAF  K  L  H+R H+G      
Sbjct: 1   GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKP++C +C K F        H
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVH 31

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  + C++C K F   S L  H+  H+G      
Sbjct: 8   SGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 7e-14
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                SG++PYKCVEC K +K +  L  H+R+H+GEK      
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKP++C +C K +        H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  + C +C K + +   L  H+  H+G++    
Sbjct: 8   SGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 7e-14
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PYKC EC K F    HL  H+R+H+G KP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C KVF ++S LARH+  H+G +P   
Sbjct: 9   GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F+ +   ++H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 8e-14
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++ Y C EC K+F     L +H+RLHSGEKP   
Sbjct: 1   GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEK + C +C K FS +    +H
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKH 31

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C K F++   L +H+  HSG++P   
Sbjct: 9   GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 9e-14
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 SG++PY C  C KAF     L  H+R+H+GEKP   
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  ++CD C K F   + L RH+  H+G++P   
Sbjct: 8   SGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 8e-06
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKP+ C  C K F  S    +H
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 9e-14
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                +G+R Y+C EC KAF  K  L+ H+R+H GEKP     
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 +GE+ ++C +C K F    + S H
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C K F + S+L+ H+  H G++P   
Sbjct: 9   GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 1e-13
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY+C  C K+F  K  L  H+++H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C  C K F+       H
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVH 31

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C  C K F K S L  H+  H+G++P   
Sbjct: 9   GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 62.1 bits (152), Expect = 1e-13
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 +G++P++C EC K+F     L  H+R+H+GEKP   
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKPF+C +C K FS S   + H
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATH 31

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  F C +C K F+  S LA H+  H+G++P   
Sbjct: 9   GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 1e-13
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK 200
                  +G++PYKC +C K+F  K  L  H++ H+GE+      
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C  C K F   S L  H+  H+G+R    
Sbjct: 9   GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C  C K F+       H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.1 bits (152), Expect = 1e-13
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY+C EC KAF  K +L  H+R H+GE     
Sbjct: 1   GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C++C K F   S+L  H+  H+G+     
Sbjct: 9   GEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 5e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F+   +   H
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVH 31

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 1e-13
 Identities = 16/43 (37%), Positives = 26/43 (60%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY+C EC KAF  + +L  H+++H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C K F   S+L  H+  H+G++P   
Sbjct: 9   GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C +C K F+   +   H
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTH 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 1e-13
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                +G+ P+ C EC K F HK +L  H+++H+GE+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 8e-06
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GE PF C +C K F+H  +   H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIH 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  F+C +C KVF   ++L  H+  H+G+RP   
Sbjct: 9   GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                +G +PY+C EC KAF     L  H+R+H+GEKP   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           G   + C++C K F++ S LARH+  H+G++P   
Sbjct: 9   GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G KP+QC +C K FS +   ++H
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARH 31

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
            SG+ PY+C EC KAF  K  L  H+R H+GE     
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  + C +C K F +   L  H+  H+G+     
Sbjct: 6   SGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
            SG++P+ C  C KAF  K +L  H++ H+ EKP   
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  F C  C+K F+  S L  H+  H+ ++P   
Sbjct: 6   SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                +G  PYKC +C K+F  K  L  H+R+H+ EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           +G   + C QC+K F+    L  H+  H+ ++P   
Sbjct: 8   AGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +G  P++C +C K FS       H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 +G+RPY C  C KAF  + +L +H+++H+GEKP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  ++C  C K F   S+L +H+  H+G++P   
Sbjct: 9   GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GE+P+ C  C K F+   +  +H
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKH 31

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY+C +C K+F  K  L  H+R+H+GE P   
Sbjct: 1   GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP++C  C K F        H
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVH 31

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C  C K F K S L  H+  H+G+ P   
Sbjct: 9   GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                +G+ PY+C EC K F  K  L  H++ HSG+     
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GE P++CC+C K FS       H
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSH 31

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  + C +C KVF++   L  H+  HSGQ     
Sbjct: 9   GENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  S  + ++C EC + F  K HL +H+R+H+GEKP   
Sbjct: 1   GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                S  K  QC +C + F+     +QH
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQH 31

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           S      C +C + F   S L +H+  H+G++P   
Sbjct: 8   SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.0 bits (149), Expect = 3e-13
 Identities = 17/43 (39%), Positives = 21/43 (48%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  SG++P+KC EC K F        H+R HSGEKP   
Sbjct: 1   GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEKPF+C +C K F  +     H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           SGE  F C++C K F  +S    H+  HSG++P   
Sbjct: 8   SGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 3e-13
 Identities = 14/43 (32%), Positives = 25/43 (58%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++PY C EC KAF  + +L +H+++H+ +KP   
Sbjct: 1   GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE  ++C +C K F   S+L +H+  H+ Q+P   
Sbjct: 9   GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP+ C +C K F+   +  +H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKH 31

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.7 bits (148), Expect = 4e-13
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 +G++P KC EC KAF  K  L  H+R H  +K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 10/35 (28%), Positives = 13/35 (37%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           GE    C +C K F   S L  H+  H   +    
Sbjct: 9   GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                +GEKP +C +C K F        H
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMH 31

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 60.6 bits (148), Expect = 5e-13
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                 G++ +KC EC   F     L  H+ +H GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
            GE  + C +CD  F++ SSL  H+  H G++P   
Sbjct: 8   MGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 GEK ++C +C   FS + S   H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLH 31

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 18/35 (51%), Positives = 24/35 (68%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
            SGQR Y+C EC K+F+ K  LT H+R+H+G  P 
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPY 168
           +SG+  + C +C K F +  SL  H+  H+G  P 
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
                 G++PYKC  C   F    HL  H  +H+G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
                 GEKP++C  C  RF        H+
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHV 31

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRL-HSGEKPFQC 198
                  +G++PY+C+EC KAF     L  H R  H+GEKP   
Sbjct: 1   GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY 225
                +G+KP++C +C K F  + S  +H  + ++  KP 
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPS 42

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARH-KYEHSGQRPYKC 170
           G+  + C +C K F +++SL RH +Y H+G++P   
Sbjct: 9   GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 59.3 bits (144), Expect = 3e-12
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 153 SSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQCC--KCLKRFSHS 208
           S  +  + + S  R + C    C K +    HL  H R H+GEKPF C    C +RF+ S
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 209 GSYSQHM 215
              S+H 
Sbjct: 63  DELSRHR 69

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 124 SNGTMSCADDNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKH 179
           S+G+     D+S     +C    C K + K S L  H   H+G++P+ C    C + F  
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 180 KHHLTEHKRLH 190
              L+ H+R H
Sbjct: 62  SDELSRHRRTH 72

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 59.6 bits (144), Expect = 3e-12
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 9/85 (10%)

Query: 123 SSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARH-KYEHSGQRPYK--------CVEC 173
                +SC   +  +       CD+ F+    L  H   EH G             C   
Sbjct: 9   PIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPRE 68

Query: 174 PKAFKHKHHLTEHKRLHSGEKPFQC 198
            K+FK K+ L  H R+H+GEK    
Sbjct: 69  GKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 58.0 bits (141), Expect = 3e-12
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
                 G++PY+C +C KAF  K  L  H R+H+G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
                 GEKP++C +C K FS  GS   H+
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHI 31

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPY 168
            GE  + CDQC K F++  SL  H   H+G  P 
Sbjct: 7   GGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.0 bits (141), Expect = 4e-12
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +  + Y C EC KAF    HLT H+++H+ +     
Sbjct: 1   GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 6/30 (20%), Positives = 12/30 (40%)

Query: 185 EHKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                 +  K + C +C K F+     ++H
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRH 31

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 57.1 bits (139), Expect = 8e-12
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
                 G++PY C  C   F+H   L  H R+H+G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 43.6 bits (104), Expect = 7e-07
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
                 GEKP+ C  C  RF H  +   H+
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHL 31

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.1 bits (136), Expect = 2e-11
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC 199
                  SG++ + C EC K F +   L  H+R+H GEK     
Sbjct: 1   GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQH 214
                SGEK   C +C K F +  +   H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIH 31

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 55.7 bits (135), Expect = 3e-11
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
                 G+ PY C +C K+F  +  L  H+R  S   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.0 bits (89), Expect = 8e-05
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYK 169
           + GE  +LC QC K F +  SLA H+   S   P  
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
                 GE P+ C +C K F+  GS + H 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ 31

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.7 bits (135), Expect = 3e-11
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++P++C EC   F     L +H R H    P   
Sbjct: 1   GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
                +GEKPFQC +C   FS S S  +H+
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHL 32

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
           +GE  F C +C   F+   SL +H   H    P   
Sbjct: 8   TGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.6 bits (132), Expect = 6e-11
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC 198
            SG++PY C EC + F   + L +H+++H+ +     
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 190 HSGEKPFQCCKCLKRFSHSGSYSQH 214
            SGEKP+ C +C + FS +    QH
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQH 29

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 54.0 bits (129), Expect = 2e-10
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           +++C++C     K S L +H   H+  RPY C  C  +FK K +LT+H +  +  K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.9 bits (116), Expect = 1e-08
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 168 YKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
           Y C EC    K    L +H R H+  +P+ C  C   F   G+ ++HM
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM 49

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 50.8 bits (122), Expect = 2e-09
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 156 ARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQC 198
                  +G++P+ C    C   F     L+ H+R HSG KP   
Sbjct: 1   GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 38.4 bits (90), Expect = 8e-05
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)

Query: 186 HKRLHSGEKPFQCC--KCLKRFSHSGSYSQHM 215
                +GEKPF C    C  RFS S   S+H 
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHR 34

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 38.1 bits (89), Expect = 8e-05
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 135 SGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKC 170
           +GE  F C    C   F++   L+RH+  HSG +P   
Sbjct: 8   TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.2 bits (120), Expect = 4e-09
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
                  +G+ P+KC +C + F  +++L +H+R H+ +  
Sbjct: 1   GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 49.9 bits (119), Expect = 4e-09
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 161 EHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC 201
               ++   C  C K F+  +HL  HK  HSGEKP+     
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.2 bits (91), Expect = 3e-05
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC 173
           Q  C+ C K+F     L RHK  HSG++PY     
Sbjct: 12  QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.1 bits (119), Expect = 2e-08
 Identities = 19/94 (20%), Positives = 25/94 (26%), Gaps = 5/94 (5%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARH-----KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH 190
           G  +F C  C   +     L  H      Y               +   K  L E +   
Sbjct: 16  GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75

Query: 191 SGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKP 224
             +K  +C  C   F      S HM     Y K 
Sbjct: 76  DAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.5 bits (94), Expect = 5e-05
 Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 153 SSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRL--HSGEKPFQCCKCLKRFSHSGS 210
           SS   +    +G   ++C +C  A+     LT H     H  +   +      +      
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 211 YSQHMNH 217
               +  
Sbjct: 65  KRSLLEM 71

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEH--KRLHS 191
           +        +       +  SL   + +   Q+  KC+ C  +F+    L+ H  K  H 
Sbjct: 47  DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY 106

Query: 192 GEKPFQ 197
            +    
Sbjct: 107 QKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 8/40 (20%), Positives = 14/40 (35%)

Query: 182 HLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSY 221
               +  + +G   F+C  C   +      + HMN    Y
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHY 45

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.9 bits (116), Expect = 2e-08
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 153 SSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYS 212
            S  + +  H G R  KC +C   F  +  L+         K   C KC K      + +
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56

Query: 213 QHM 215
           +  
Sbjct: 57  KDE 59

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 46.6 bits (110), Expect = 1e-07
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 7/62 (11%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
            G+    C +C  +F + S+L+R K          C +C K    +  L + +   SG+K
Sbjct: 14  LGDRSQKCSKCGIIFIRRSTLSRRK-------TPMCEKCRKDSCQEAALNKDEGNESGKK 66

Query: 195 PF 196
             
Sbjct: 67  TS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 182 HLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYC 222
              + +++H G++  +C KC   F    + S+        C
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKC 45

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
             R  +G KPFQC  C + FS S   + H 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 38.9 bits (91), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLH 190
            +G +P++C +C ++F    HL  H++ H
Sbjct: 6   STGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 2/74 (2%)

Query: 149 FAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHS 208
               SS             + C  C   F     L +H R    E    C  C K F+ +
Sbjct: 56  LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST 113

Query: 209 GSYSQHMNHRYSYC 222
            S   H+  +++ C
Sbjct: 114 DSALDHVCKKHNIC 127

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           R + C  C +AF  + HL  H R H+ EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 3/79 (3%)

Query: 136 GEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP 195
            +  + C  C+   +       H  E   +    C  C   F       EH+      K 
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSH--ERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKK 69

Query: 196 FQCCKCLKRFSHSGSYSQH 214
             C +C++ F  S S  +H
Sbjct: 70  LTCLECMRTFKSSFSIWRH 88

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.2 bits (93), Expect = 4e-04
 Identities = 14/93 (15%), Positives = 27/93 (29%)

Query: 99  EGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARH 158
           + D+S  ++    +     + L  S N       +       + +    + +KH +    
Sbjct: 112 DTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGL 171

Query: 159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHS 191
               S    Y+C  C         L  H   H 
Sbjct: 172 PPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	227
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.83
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.82
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.81
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.78
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.77
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.73
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.73
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.71
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.7
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.68
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.68
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.64
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.64
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.62
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.61
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.6
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.59
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.59
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.59
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.58
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.58
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.57
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.55
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.53
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.53
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.53
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.51
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.49
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.49
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.48
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.47
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.46
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.46
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.41
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.4
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.39
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.39
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.38
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.37
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.36
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.35
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.35
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.29
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.27
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.26
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.26
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.26
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.25
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.25
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.22
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.2
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.2
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.2
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.1
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.07
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.07
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.0
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.98
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.98
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.97
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.96
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.96
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.95
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.95
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.94
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.94
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.94
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.93
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.92
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.92
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.92
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.92
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.89
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.87
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.86
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.79
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.77
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.77
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.73
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.72
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.67
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.67
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.67
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.59
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.59
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.59
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.55
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.51
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.51
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.48
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.48
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.47
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.46
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.45
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.45
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.44
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.44
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.43
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.41
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.39
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.38
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.35
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.33
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.68
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.33
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.67
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.67
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.32
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.32
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.31
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.28
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.25
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.21
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.21
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.21
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.2
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.19
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.19
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.18
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.18
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.18
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.15
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.15
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.13
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.11
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.1
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.09
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.07
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.05
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.05
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.3
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.29
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.2
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.75
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.7
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.25
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.25
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.08
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.73
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.04
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.89
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.47
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.29
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.52
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.22
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.6
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.51
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.3
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.63
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.78
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	87.04
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	87.01
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	85.8
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	83.45
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	82.74
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.45
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	81.81
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	81.74
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	81.44
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	81.16
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.97

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=6.3e-31  Score=192.16  Aligned_cols=161  Identities=29%  Similarity=0.598  Sum_probs=114.6

Q ss_pred             hccccCCccccCCCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCC
Q psy16147         22 LMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGD  101 (227)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~  101 (227)
                      .|.+...+..|...|.++++|.|++|++.|.+..+|..|+++|.+...       ..|..|+..|.....|..       
T Consensus        30 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------~~C~~C~~~f~~~~~l~~-------   95 (190)
T 2i13_A           30 SFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP-------YKCPECGKSFSQRANLRA-------   95 (190)
T ss_dssp             -CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCC-------EECTTTCCEESCHHHHHH-------
T ss_pred             ccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCC-------ccCcccCCccCCHHHHHH-------
Confidence            555555555566666666666666666666666666666666654321       123444444433221111       


Q ss_pred             CCccCCCCCchHHHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCch
Q psy16147        102 ESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKH  181 (227)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  181 (227)
                                                  +...+.++++|.|++|++.|.....|..|++.|+++++|.|+.|++.|....
T Consensus        96 ----------------------------H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  147 (190)
T 2i13_A           96 ----------------------------HQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRED  147 (190)
T ss_dssp             ----------------------------HHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             ----------------------------HHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHH
Confidence                                        1123455688999999999999999999999999999999999999999999


Q ss_pred             hHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccccCC
Q psy16147        182 HLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       182 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      .|..|++.|.++++|.|++|++.|.+...|..|+++ |++++||
T Consensus       148 ~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~k~~  190 (190)
T 2i13_A          148 NLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT-HTGKKTS  190 (190)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTT-C------
T ss_pred             HHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHh-cCCCCCC
Confidence            999999999999999999999999999999999995 6778886

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=6.2e-29  Score=181.57  Aligned_cols=156  Identities=31%  Similarity=0.669  Sum_probs=109.9

Q ss_pred             CccccCCCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCC
Q psy16147         28 GTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRM  107 (227)
Q Consensus        28 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~  107 (227)
                      .+..+...++++++|.|++|++.|.+..+|..|++.|.+...       ..|..|+..|.....|..|            
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-------~~C~~C~~~f~~~~~l~~H------------   68 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKP-------YKCPECGKSFSDKKDLTRH------------   68 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CC-------EECTTTCCEESSHHHHHHH------------
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCC-------ccCCCcCchhCCHHHHHHH------------
Confidence            345566778899999999999999999999999999876442       2466677766554322222            


Q ss_pred             CCCchHHHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHH
Q psy16147        108 DEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHK  187 (227)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  187 (227)
                                             ...+.++++|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+
T Consensus        69 -----------------------~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (190)
T 2i13_A           69 -----------------------QRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ  125 (190)
T ss_dssp             -----------------------HHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH
T ss_pred             -----------------------HHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH
Confidence                                   122345678999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCcccccccccccCchhHHHhhhcccccccCCC
Q psy16147        188 RLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR  226 (227)
Q Consensus       188 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  226 (227)
                      +.|.++++|.|+.|++.|.+...|..|++. |.+++||+
T Consensus       126 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~~  163 (190)
T 2i13_A          126 RTHTGEKPYKCPECGKSFSREDNLHTHQRT-HTGEKPYK  163 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHCCCCEE
T ss_pred             HHhCCCCCeECCCCCcccCCHHHHHHHHHh-cCCCCCeE
Confidence            999999999999999999999999999995 56677763

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=7.2e-26  Score=153.95  Aligned_cols=117  Identities=26%  Similarity=0.563  Sum_probs=107.8

Q ss_pred             CCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHHH
Q psy16147         37 SGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKL  116 (227)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (227)
                      +++++|.|.+|++.|.+..+|..|+++|.+                                                  
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--------------------------------------------------   32 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTG--------------------------------------------------   32 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSS--------------------------------------------------
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCC--------------------------------------------------
Confidence            578899999999999999999999998732                                                  


Q ss_pred             hhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhh---hcCCCCccCCCCCcccCCchhHHHHHhhccCC
Q psy16147        117 KSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYE---HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE  193 (227)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  193 (227)
                                          +++|.|++|++.|.....|..|++.   +.++++|.|++|++.|.....|..|++.|.++
T Consensus        33 --------------------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (124)
T 2dlq_A           33 --------------------EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE   92 (124)
T ss_dssp             --------------------CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             --------------------CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCC
Confidence                                2468999999999999999999985   56788999999999999999999999999999


Q ss_pred             CCcccccccccccCchhHHHhhhccccccc
Q psy16147        194 KPFQCCKCLKRFSHSGSYSQHMNHRYSYCK  223 (227)
Q Consensus       194 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  223 (227)
                      ++|.|++|++.|.+...|..|++..|+++.
T Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           93 MPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             CCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            999999999999999999999998887764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=4e-25  Score=149.20  Aligned_cols=112  Identities=37%  Similarity=0.824  Sum_probs=104.4

Q ss_pred             CCCCcccCCc--chhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHH
Q psy16147         37 SGEGQFLCDQ--CDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSER  114 (227)
Q Consensus        37 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (227)
                      +++++|.|.+  |++.|.+..+|..|+++|.+                                                
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------------------------------------------   33 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG------------------------------------------------   33 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT------------------------------------------------
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC------------------------------------------------
Confidence            5789999997  99999999999999998732                                                


Q ss_pred             HHhhhhhcCCCCcccccCCCCCCCccccC--cCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccC
Q psy16147        115 KLKSRLMMSSNGTMSCADDNSGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG  192 (227)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  192 (227)
                                            +++|.|+  .|++.|.....|..|++.|+++++|.|++|++.|.....|..|++.|.+
T Consensus        34 ----------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (119)
T 2jp9_A           34 ----------------------EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG   91 (119)
T ss_dssp             ----------------------TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred             ----------------------CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence                                  2468899  7999999999999999999999999999999999999999999999999


Q ss_pred             CCCccc--ccccccccCchhHHHhhhcc
Q psy16147        193 EKPFQC--CKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       193 ~~~~~C--~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +++|.|  +.|++.|.+...|..|+++|
T Consensus        92 ~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           92 EKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999  89999999999999999854

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=3.4e-25  Score=156.46  Aligned_cols=145  Identities=28%  Similarity=0.500  Sum_probs=114.1

Q ss_pred             CCcccCCcchhhhcChhHHHHHHH---hccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHH
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKY---EHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERK  115 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~---~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (227)
                      |.+|.|++|++.|.+..+|..|++   +|.+..+....  ...|..|++.|.....|..|                    
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~--~c~C~~c~~~f~~~~~l~~H--------------------   58 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCH--WGGCSRELRPFKAQYMLVVH--------------------   58 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCC--BTTCTTTTCCCSSHHHHHHH--------------------
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCC--CCCccchhhhhhhHHHHHHH--------------------
Confidence            457999999999999999999998   45443321100  00133334445433222111                    


Q ss_pred             HhhhhhcCCCCcccccCCCCCCCccccCc--CccccCChhHHHhHHhhhcCCCCccCCC--CCcccCCchhHHHHH-hhc
Q psy16147        116 LKSRLMMSSNGTMSCADDNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHK-RLH  190 (227)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h  190 (227)
                                     ...+.++++|.|++  |++.|.....|..|++.|.++++|.|+.  |++.|.+...|..|+ +.|
T Consensus        59 ---------------~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H  123 (155)
T 2gli_A           59 ---------------MRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH  123 (155)
T ss_dssp             ---------------THHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             ---------------HHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc
Confidence                           23345668899986  9999999999999999999999999998  999999999999998 789


Q ss_pred             cCCCCccccc--ccccccCchhHHHhhhcccc
Q psy16147        191 SGEKPFQCCK--CLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       191 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~  220 (227)
                      .++++|.|+.  |++.|.+.+.|..|++.+|+
T Consensus       124 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999999998  99999999999999998774

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=8e-24  Score=149.41  Aligned_cols=128  Identities=29%  Similarity=0.442  Sum_probs=110.7

Q ss_pred             CCCCCcccCCcchhhhcChhHHHHHHHh-ccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHH
Q psy16147         36 NSGEGQFLCDQCDKVFAKHSSLARHKYE-HSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSER  114 (227)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (227)
                      ..++.+|.|.+|++.|.+..+|..|++. |.+....                                            
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~--------------------------------------------   55 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ--------------------------------------------   55 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTC--------------------------------------------
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCccc--------------------------------------------
Confidence            4467889999999999999999999997 5321100                                            


Q ss_pred             HHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC--CCcccCCchhHHHHHhhccC
Q psy16147        115 KLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSG  192 (227)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  192 (227)
                                        .......|.|++|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.|.+
T Consensus        56 ------------------~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~  117 (155)
T 2rpc_A           56 ------------------NNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG  117 (155)
T ss_dssp             ------------------SSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCS
T ss_pred             ------------------CCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCC
Confidence                              0001134789999999999999999999999999999998  99999999999999999999


Q ss_pred             CCCccccc--ccccccCchhHHHhhhcccccccCCC
Q psy16147        193 EKPFQCCK--CLKRFSHSGSYSQHMNHRYSYCKPYR  226 (227)
Q Consensus       193 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~  226 (227)
                      +++|.|.+  |++.|.+...|..|++ .|++++||+
T Consensus       118 ~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~~  152 (155)
T 2rpc_A          118 EKPFKCEFEGCDRRFANSSDRKKHMH-VHTSDKSGP  152 (155)
T ss_dssp             SCSBCCSSTTCCCCBSSHHHHHHSST-TTTSCCCSC
T ss_pred             CCCccCCCCCCCCccCCHHHHHHHHH-HhcCCCCCC
Confidence            99999997  9999999999999998 567889985

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=5.6e-25  Score=150.79  Aligned_cols=107  Identities=25%  Similarity=0.495  Sum_probs=95.6

Q ss_pred             CCCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCch
Q psy16147         33 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSS  112 (227)
Q Consensus        33 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (227)
                      ...++|+++|.|++||+.|.+..+|..|+++|.+                                              
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~----------------------------------------------   47 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW----------------------------------------------   47 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC----------------------------------------------
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC----------------------------------------------
Confidence            4456899999999999999999999999998832                                              


Q ss_pred             HHHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccC
Q psy16147        113 ERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG  192 (227)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  192 (227)
                                              +++|.|++|+++|.....|..|++.|+++++|.|++|++.|.....|..|++.|.+
T Consensus        48 ------------------------~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           48 ------------------------EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             ------------------------CSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTC
T ss_pred             ------------------------CCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcC
Confidence                                    35789999999999999999999999999999999999999999999999999876


Q ss_pred             C------CCcccccccccccCch
Q psy16147        193 E------KPFQCCKCLKRFSHSG  209 (227)
Q Consensus       193 ~------~~~~C~~C~~~f~~~~  209 (227)
                      +      ++|.|.+|++.|....
T Consensus       104 ~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A          104 QDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             CCTTSSSCCEEECCCCSSCCCCC
T ss_pred             CCCCCCCCCeecCCCCchhhhcc
Confidence            5      4589999999887653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.90  E-value=2.1e-24  Score=157.44  Aligned_cols=168  Identities=22%  Similarity=0.414  Sum_probs=109.4

Q ss_pred             CCCcccC--CcchhhhcChhHHHHHHHhccccccCCCCCCCCCC--CCCCCCCCCCCCcccCCCCCCCCCccCCCCCchH
Q psy16147         38 GEGQFLC--DQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRH--SICNRPTASYPELSDMGSLEGDESLDRMDEDSSE  113 (227)
Q Consensus        38 ~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~--~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (227)
                      ++++|.|  ..|++.|.+..+|..|+++|.++.+       ..|  ..|++.|.....|..|...+.......+....+.
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~-------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   81 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKP-------FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCD   81 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCS-------SCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCC
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCC-------ccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCC
Confidence            4566777  5677777777777777777665432       134  5566666666555555443322222111100111


Q ss_pred             HHHhhhhhcCCCCccccc-CCC-CCCCcccc--CcCccccCChhHHHhHHhhhcCCCCccCCC--CCcccCCchhHHHHH
Q psy16147        114 RKLKSRLMMSSNGTMSCA-DDN-SGEGQFLC--DQCDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHK  187 (227)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~  187 (227)
                      ..+.....     +..+. ..| .+.++|.|  +.|++.|.....|..|++.|+++++|.|+.  |++.|.....|..|+
T Consensus        82 ~~f~~~~~-----l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~  156 (190)
T 1tf6_A           82 LRFTTKAN-----MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE  156 (190)
T ss_dssp             CEESCHHH-----HHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHH
T ss_pred             CccCCHHH-----HHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHH
Confidence            11110000     00111 223 34577889  889999999999999999998889999977  999999999999999


Q ss_pred             hhccCCCCccccc---ccccccCchhHHHhhhcccc
Q psy16147        188 RLHSGEKPFQCCK---CLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       188 ~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~~h~  220 (227)
                      +.|.+   |.|..   |++.|.+...|..|++.+|+
T Consensus       157 ~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          157 KVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             TSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             HHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            88887   88888   99999999999999887664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=4.3e-24  Score=145.19  Aligned_cols=116  Identities=30%  Similarity=0.683  Sum_probs=100.5

Q ss_pred             CCCcccCC--cchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHH
Q psy16147         38 GEGQFLCD--QCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERK  115 (227)
Q Consensus        38 ~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (227)
                      ++++|.|.  .|++.|.+..+|..|+++| +                                                 
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~-------------------------------------------------   31 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-G-------------------------------------------------   31 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-S-------------------------------------------------
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-C-------------------------------------------------
Confidence            35789999  8999999999999999876 1                                                 


Q ss_pred             HhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC--CCcccCCchhHHHHHhhccCC
Q psy16147        116 LKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGE  193 (227)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  193 (227)
                                           +++|.|++|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.|.++
T Consensus        32 ---------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   90 (124)
T 1ubd_C           32 ---------------------PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   90 (124)
T ss_dssp             ---------------------CCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             ---------------------CCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCC
Confidence                                 246899999999999999999999999999999986  999999999999999999999


Q ss_pred             CCcccc--cccccccCchhHHHhhhcccccccCC
Q psy16147        194 KPFQCC--KCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       194 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      ++|.|+  .|++.|.+.+.|..|+++ |++++|+
T Consensus        91 ~~~~C~~~~C~~~f~~~~~L~~H~~~-H~~~k~~  123 (124)
T 1ubd_C           91 RPYVCPFDGCNKKFAQSTNLKSHILT-HAKAKNN  123 (124)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHH-HC-----
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHH-HcccccC
Confidence            999996  599999999999999996 5666665

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=1.7e-23  Score=143.41  Aligned_cols=92  Identities=29%  Similarity=0.468  Sum_probs=86.9

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCch
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSG  209 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  209 (227)
                      +..++.|+++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|++.|.+.+
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            34567888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHhhhccccc
Q psy16147        210 SYSQHMNHRYSY  221 (227)
Q Consensus       210 ~l~~H~~~~h~~  221 (227)
                      .|..|++.+|+.
T Consensus        93 ~L~~H~~~hh~~  104 (133)
T 2lt7_A           93 FMSSHIKSVHSQ  104 (133)
T ss_dssp             HHHHHHHHHTCC
T ss_pred             HHHHHhHHhcCC
Confidence            999999988754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.6e-21  Score=124.21  Aligned_cols=90  Identities=31%  Similarity=0.645  Sum_probs=84.4

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHh
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH  214 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  214 (227)
                      .++++|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccccC
Q psy16147        215 MNHRYSYCKP  224 (227)
Q Consensus       215 ~~~~h~~~~~  224 (227)
                      ++.|+....|
T Consensus        84 ~~~h~~~~~p   93 (96)
T 2dmd_A           84 LRSHTGDSGP   93 (96)
T ss_dssp             HTTCCSCCCC
T ss_pred             HHHhcCCCCC
Confidence            9977655444

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=1.7e-20  Score=123.77  Aligned_cols=92  Identities=34%  Similarity=0.684  Sum_probs=86.0

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHH
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQ  213 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  213 (227)
                      ...+++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|.++++|.|.+|++.|.+...|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcccccccCCC
Q psy16147        214 HMNHRYSYCKPYR  226 (227)
Q Consensus       214 H~~~~h~~~~~~~  226 (227)
                      |++ .|.+++||.
T Consensus        92 H~~-~H~~~~~~~  103 (106)
T 2ee8_A           92 HKT-LHMQTSSPT  103 (106)
T ss_dssp             HHH-HTTSCCCCC
T ss_pred             HHH-HhCCCCCCc
Confidence            998 557778874

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=8.5e-21  Score=125.48  Aligned_cols=93  Identities=17%  Similarity=0.257  Sum_probs=87.3

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchh
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGS  210 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  210 (227)
                      ...+.++++|.|++|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|+. |.++++|.|.+|++.|.+...
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            356788899999999999999999999999984  79999999999999999999996 999999999999999999999


Q ss_pred             HHHhhhcccccccCCC
Q psy16147        211 YSQHMNHRYSYCKPYR  226 (227)
Q Consensus       211 l~~H~~~~h~~~~~~~  226 (227)
                      |..|++..|.+++||.
T Consensus        85 L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             HHHHHHHTSCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCC
Confidence            9999998889999985

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.83  E-value=4.9e-20  Score=121.55  Aligned_cols=96  Identities=32%  Similarity=0.656  Sum_probs=87.1

Q ss_pred             CCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchH
Q psy16147         34 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSE  113 (227)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (227)
                      ....++++|.|.+|++.|.+..+|..|+++|.+                                               
T Consensus        10 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------------------------------   42 (106)
T 2ee8_A           10 LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTD-----------------------------------------------   42 (106)
T ss_dssp             CCCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC-----------------------------------------------
T ss_pred             CCcCCCcCeECCCCCCccCCHHHHHHHHHHcCC-----------------------------------------------
Confidence            344568899999999999999999999998732                                               


Q ss_pred             HHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCC
Q psy16147        114 RKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE  193 (227)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  193 (227)
                                             +++|.|++|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|.++
T Consensus        43 -----------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   99 (106)
T 2ee8_A           43 -----------------------ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQT   99 (106)
T ss_dssp             -----------------------SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSC
T ss_pred             -----------------------CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCC
Confidence                                   246899999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccc
Q psy16147        194 KPFQCC  199 (227)
Q Consensus       194 ~~~~C~  199 (227)
                      ++|.+.
T Consensus       100 ~~~~~~  105 (106)
T 2ee8_A          100 SSPTAA  105 (106)
T ss_dssp             CCCCCC
T ss_pred             CCCcCC
Confidence            998653

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.7e-20  Score=120.32  Aligned_cols=88  Identities=38%  Similarity=0.714  Sum_probs=82.7

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCC--CCcccccccccccCchhHH
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE--KPFQCCKCLKRFSHSGSYS  212 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~  212 (227)
                      .++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|.++  ++|.|+.|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999987  8999999999999999999


Q ss_pred             Hhhhcccccc
Q psy16147        213 QHMNHRYSYC  222 (227)
Q Consensus       213 ~H~~~~h~~~  222 (227)
                      .|++..|+++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9998777664

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.81  E-value=1.7e-20  Score=117.88  Aligned_cols=81  Identities=38%  Similarity=0.736  Sum_probs=78.2

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.+.+.|..|++.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             c
Q psy16147        219 Y  219 (227)
Q Consensus       219 h  219 (227)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.4e-20  Score=122.63  Aligned_cols=88  Identities=41%  Similarity=0.792  Sum_probs=83.8

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHH
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYS  212 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  212 (227)
                      .|+++++|.| .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|.++++|.|++|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            4678899999 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhhccccc
Q psy16147        213 QHMNHRYSY  221 (227)
Q Consensus       213 ~H~~~~h~~  221 (227)
                      .|++.+|..
T Consensus        83 ~H~~~~~~~   91 (110)
T 2csh_A           83 RHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHcccc
Confidence            999988743

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=3.9e-20  Score=118.32  Aligned_cols=84  Identities=38%  Similarity=0.810  Sum_probs=79.2

Q ss_pred             CCccccC--cCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHh
Q psy16147        137 EGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQH  214 (227)
Q Consensus       137 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  214 (227)
                      +++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.+.+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4689998  69999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccc
Q psy16147        215 MNHRYS  220 (227)
Q Consensus       215 ~~~~h~  220 (227)
                      ++.|+.
T Consensus        82 ~~~H~~   87 (90)
T 1a1h_A           82 TKIHLR   87 (90)
T ss_dssp             HGGGGC
T ss_pred             HHHhcc
Confidence            996543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.7e-19  Score=116.72  Aligned_cols=91  Identities=35%  Similarity=0.665  Sum_probs=83.2

Q ss_pred             CCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHH
Q psy16147         36 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERK  115 (227)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (227)
                      ..++++|.|.+|++.|.+..+|..|+++|.                                                  
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--------------------------------------------------   32 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHT--------------------------------------------------   32 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCC--------------------------------------------------
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcC--------------------------------------------------
Confidence            467899999999999999999999998763                                                  


Q ss_pred             HhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCC
Q psy16147        116 LKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP  195 (227)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  195 (227)
                                          +.++|.|++|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|.++++
T Consensus        33 --------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           33 --------------------GVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             --------------------CCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             --------------------CCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence                                235689999999999999999999999999999999999999999999999999998865


Q ss_pred             c
Q psy16147        196 F  196 (227)
Q Consensus       196 ~  196 (227)
                      .
T Consensus        93 p   93 (96)
T 2dmd_A           93 P   93 (96)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=5e-20  Score=123.31  Aligned_cols=96  Identities=22%  Similarity=0.331  Sum_probs=85.6

Q ss_pred             cccccCCCCCCCccccCcCccccCChhHHHhHHhh--hcCCCCc-cCCCCCccc--CCchhHHHHHhhccCCCCcccccc
Q psy16147        127 TMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYE--HSGQRPY-KCVECPKAF--KHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       127 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      +..+.+.|.++++|.|++|++.|.....|..|++.  |.+.+++ .|..|+..|  .....|..|++.|.++++|.|.+|
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCC
Confidence            33445778889999999999999999999999998  7666665 499999998  899999999999999999999999


Q ss_pred             cccccCchhHHHhhhcccccc
Q psy16147        202 LKRFSHSGSYSQHMNHRYSYC  222 (227)
Q Consensus       202 ~~~f~~~~~l~~H~~~~h~~~  222 (227)
                      ++.|.+...|..|++.+|...
T Consensus        87 ~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCccCCHHHHHHHHHHhCCcc
Confidence            999999999999999877554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=8.7e-20  Score=120.58  Aligned_cols=94  Identities=16%  Similarity=0.335  Sum_probs=86.5

Q ss_pred             CCCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCch
Q psy16147         33 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSS  112 (227)
Q Consensus        33 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (227)
                      ...|+++++|.|.+|++.|.+..+|..|+++|.                                               
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-----------------------------------------------   40 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-----------------------------------------------   40 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-----------------------------------------------
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-----------------------------------------------
Confidence            556889999999999999999999999999871                                               


Q ss_pred             HHHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHh-hcc
Q psy16147        113 ERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKR-LHS  191 (227)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~  191 (227)
                                               ++|.|++|++.|.....|..|++ |.++++|.|++|++.|.....|..|++ .|.
T Consensus        41 -------------------------~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   94 (107)
T 1wjp_A           41 -------------------------NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHN   94 (107)
T ss_dssp             -------------------------HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             -------------------------CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcC
Confidence                                     24789999999999999999996 999999999999999999999999997 899


Q ss_pred             CCCCcccc
Q psy16147        192 GEKPFQCC  199 (227)
Q Consensus       192 ~~~~~~C~  199 (227)
                      ++++|.|.
T Consensus        95 ~~~~~~~~  102 (107)
T 1wjp_A           95 QNNMAPTS  102 (107)
T ss_dssp             CCCCCCCC
T ss_pred             CCCCCCCC
Confidence            99999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=1.9e-19  Score=120.44  Aligned_cols=106  Identities=18%  Similarity=0.260  Sum_probs=88.2

Q ss_pred             ccCCccccCCCCCCCCcccCCcchhhhcChhHHHHHHHh--ccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCC
Q psy16147         25 SSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYE--HSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDE  102 (227)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~  102 (227)
                      +...+..|...|+++++|.|++|++.|.+..+|..|+++  |..+                                   
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~-----------------------------------   47 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRD-----------------------------------   47 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBC-----------------------------------
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCcccc-----------------------------------
Confidence            456677888999999999999999999999999999997  3111                                   


Q ss_pred             CccCCCCCchHHHHhhhhhcCCCCcccccCCCCCCCccccCcCcccc--CChhHHHhHHhhhcCCCCccCCCCCcccCCc
Q psy16147        103 SLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVF--AKHSSLARHKYEHSGQRPYKCVECPKAFKHK  180 (227)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  180 (227)
                                                        ...+.|++|++.|  .....|..|++.|.++++|.|++|++.|...
T Consensus        48 ----------------------------------~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~   93 (115)
T 2dmi_A           48 ----------------------------------DNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESL   93 (115)
T ss_dssp             ----------------------------------SCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSH
T ss_pred             ----------------------------------CCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCH
Confidence                                              1124599999988  8888999999999999999999999999999


Q ss_pred             hhHHHHHhhccCCCCcccc
Q psy16147        181 HHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       181 ~~l~~H~~~h~~~~~~~C~  199 (227)
                      ..|..|++.|.......++
T Consensus        94 ~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           94 QDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             HHHHHHHHHTTTTTCSCCC
T ss_pred             HHHHHHHHHhCCcccCCCC
Confidence            9999999987766555444

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=3.5e-19  Score=113.83  Aligned_cols=87  Identities=29%  Similarity=0.658  Sum_probs=77.7

Q ss_pred             CCCcccCC--cchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHH
Q psy16147         38 GEGQFLCD--QCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERK  115 (227)
Q Consensus        38 ~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (227)
                      |+++|.|.  .|++.|.+..+|..|+++|.+                                                 
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------------------------------------------   31 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG-------------------------------------------------   31 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC-------------------------------------------------
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC-------------------------------------------------
Confidence            47899998  599999999999999998732                                                 


Q ss_pred             HhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCC
Q psy16147        116 LKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK  194 (227)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  194 (227)
                                           +++|.|++|++.|.....|..|++.|+++++|.|++|++.|.....|..|++.|.+++
T Consensus        32 ---------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           32 ---------------------QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             ---------------------CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             ---------------------CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence                                 2468999999999999999999999999999999999999999999999999999875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.77  E-value=3.9e-19  Score=119.59  Aligned_cols=91  Identities=36%  Similarity=0.788  Sum_probs=84.3

Q ss_pred             CCCCccccCc--CccccCChhHHHhHHhhhcCCCCccCC--CCCcccCCchhHHHHHhhccCCCCcccccccccccCchh
Q psy16147        135 SGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGS  210 (227)
Q Consensus       135 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  210 (227)
                      +++++|.|++  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            3567899997  999999999999999999999999999  799999999999999999999999999999999999999


Q ss_pred             HHHhhhcccccccCCC
Q psy16147        211 YSQHMNHRYSYCKPYR  226 (227)
Q Consensus       211 l~~H~~~~h~~~~~~~  226 (227)
                      |..|++. |.+++||+
T Consensus        82 l~~H~~~-h~~~~~~~   96 (119)
T 2jp9_A           82 LKTHTRT-HTGEKPFS   96 (119)
T ss_dssp             HHHHHHH-HHTCCCEE
T ss_pred             HHHHHHH-hcCCCCee
Confidence            9999995 56677763

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.77  E-value=9.4e-20  Score=128.42  Aligned_cols=110  Identities=25%  Similarity=0.479  Sum_probs=94.9

Q ss_pred             hhhccccCCccccCCC-CCCCCc--------ccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCC
Q psy16147         20 SRLMMSSNGTMSCADD-NSGEGQ--------FLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYP   90 (227)
Q Consensus        20 ~~~~~~~~~~~~~~~~-~~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~   90 (227)
                      .+.|.+...+..|... |.++++        |.|.+|++.|.+...|..|+++|.+                        
T Consensus        32 ~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------------------------   87 (155)
T 2rpc_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG------------------------   87 (155)
T ss_dssp             CCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC------------------------
T ss_pred             CcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC------------------------
Confidence            3356666666666655 655544        8999999999999999999998732                        


Q ss_pred             CcccCCCCCCCCCccCCCCCchHHHHhhhhhcCCCCcccccCCCCCCCccccCc--CccccCChhHHHhHHhhhcCCCCc
Q psy16147         91 ELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPY  168 (227)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~  168 (227)
                                                                    +++|.|++  |++.|.....|..|++.|+++++|
T Consensus        88 ----------------------------------------------~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~  121 (155)
T 2rpc_A           88 ----------------------------------------------EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF  121 (155)
T ss_dssp             ----------------------------------------------CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSB
T ss_pred             ----------------------------------------------CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCc
Confidence                                                          24689998  999999999999999999999999


Q ss_pred             cCCC--CCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        169 KCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       169 ~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      .|..  |++.|.....|..|++.|.++++|.|.
T Consensus       122 ~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          122 KCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9997  999999999999999999999999985

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=9.1e-19  Score=118.61  Aligned_cols=91  Identities=30%  Similarity=0.611  Sum_probs=83.6

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhh---ccCCCCcccccccccccCchhH
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRL---HSGEKPFQCCKCLKRFSHSGSY  211 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l  211 (227)
                      .+.++|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+..   +.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            4567899999999999999999999999999999999999999999999999985   5788999999999999999999


Q ss_pred             HHhhhcccccccCCC
Q psy16147        212 SQHMNHRYSYCKPYR  226 (227)
Q Consensus       212 ~~H~~~~h~~~~~~~  226 (227)
                      ..|++. |.+++||+
T Consensus        83 ~~H~~~-h~~~~~~~   96 (124)
T 2dlq_A           83 RLHMVS-HTGEMPYK   96 (124)
T ss_dssp             HHHHHH-HSSSCSEE
T ss_pred             HHHHHH-cCCCCCcc
Confidence            999985 56777763

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=2.7e-18  Score=110.82  Aligned_cols=89  Identities=35%  Similarity=0.727  Sum_probs=80.1

Q ss_pred             CCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHH
Q psy16147         36 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERK  115 (227)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (227)
                      .+++++|.|.+|++.|.+...|..|+++|.+                                                 
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------------------------------------------   32 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG-------------------------------------------------   32 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCS-------------------------------------------------
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCC-------------------------------------------------
Confidence            3578999999999999999999999998732                                                 


Q ss_pred             HhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCC--CCccCCCCCcccCCchhHHHHHh-hccC
Q psy16147        116 LKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQ--RPYKCVECPKAFKHKHHLTEHKR-LHSG  192 (227)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~~-~h~~  192 (227)
                                           +++|.|++|++.|.....|..|++.|+++  ++|.|++|++.|.....|..|++ .|.+
T Consensus        33 ---------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           33 ---------------------EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             ---------------------SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             ---------------------CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence                                 35689999999999999999999999987  89999999999999999999986 6876


Q ss_pred             CC
Q psy16147        193 EK  194 (227)
Q Consensus       193 ~~  194 (227)
                      +.
T Consensus        92 ~~   93 (95)
T 2yt9_A           92 PS   93 (95)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.75  E-value=1.4e-18  Score=110.81  Aligned_cols=82  Identities=39%  Similarity=0.788  Sum_probs=78.1

Q ss_pred             CCccccCc--CccccCChhHHHhHHhhhcCCCCccCC--CCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHH
Q psy16147        137 EGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYS  212 (227)
Q Consensus       137 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  212 (227)
                      ..+|.|+.  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|.+.+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  69999999999999999999999999999999999999999


Q ss_pred             Hhhhcc
Q psy16147        213 QHMNHR  218 (227)
Q Consensus       213 ~H~~~~  218 (227)
                      .|++.|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            999865

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=1e-18  Score=109.66  Aligned_cols=82  Identities=37%  Similarity=0.760  Sum_probs=75.5

Q ss_pred             cccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHHHhhhh
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRL  120 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (227)
                      +|.|.+|++.|.+..+|..|+++|.+                                                      
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~------------------------------------------------------   26 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD------------------------------------------------------   26 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT------------------------------------------------------
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC------------------------------------------------------
Confidence            58999999999999999999998732                                                      


Q ss_pred             hcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccC
Q psy16147        121 MMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG  192 (227)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  192 (227)
                                      +++|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|++.|.|
T Consensus        27 ----------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           27 ----------------TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ----------------CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             ----------------CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence                            24689999999999999999999999999999999999999999999999999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.3e-18  Score=113.46  Aligned_cols=88  Identities=30%  Similarity=0.559  Sum_probs=80.6

Q ss_pred             CCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchH
Q psy16147         34 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSE  113 (227)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (227)
                      ..|+++++|.| +|++.|.+...|..|+++|.+                                               
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~-----------------------------------------------   34 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG-----------------------------------------------   34 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSC-----------------------------------------------
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCC-----------------------------------------------
Confidence            45789999999 999999999999999998732                                               


Q ss_pred             HHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccC
Q psy16147        114 RKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG  192 (227)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  192 (227)
                                             .++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|..
T Consensus        35 -----------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           35 -----------------------LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             -----------------------CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             -----------------------CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence                                   25689999999999999999999999999999999999999999999999998753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=4e-18  Score=111.05  Aligned_cols=85  Identities=40%  Similarity=0.769  Sum_probs=79.7

Q ss_pred             CCCCccccCc--CccccCChhHHHhHHhhhcCCCCccCC--CCCcccCCchhHHHHHhhccCCCCcccccccccccCchh
Q psy16147        135 SGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGS  210 (227)
Q Consensus       135 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  210 (227)
                      ...++|.|+.  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|.++++|.|+.|++.|.+...
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            3457899997  999999999999999999999999996  699999999999999999999999999999999999999


Q ss_pred             HHHhhhccc
Q psy16147        211 YSQHMNHRY  219 (227)
Q Consensus       211 l~~H~~~~h  219 (227)
                      |..|++.|+
T Consensus        91 l~~H~~~H~   99 (100)
T 2ebt_A           91 LALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.73  E-value=2.8e-19  Score=113.85  Aligned_cols=83  Identities=19%  Similarity=0.400  Sum_probs=78.0

Q ss_pred             CCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhh
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      +++|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.+ .+|.|+.|++.|.+...|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            36899999999999999999999999999999999999999999999999999874 78999999999999999999999


Q ss_pred             cccc
Q psy16147        217 HRYS  220 (227)
Q Consensus       217 ~~h~  220 (227)
                      ..|.
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7763

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.73  E-value=4.6e-18  Score=115.20  Aligned_cols=88  Identities=38%  Similarity=0.683  Sum_probs=80.6

Q ss_pred             CCccccC--cCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccccc--ccccccCchhHH
Q psy16147        137 EGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK--CLKRFSHSGSYS  212 (227)
Q Consensus       137 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~  212 (227)
                      +++|.|+  .|++.|.....|..|++.| ++++|.|+.|++.|.....|..|++.|.++++|.|++  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4679999  8999999999999999998 8899999999999999999999999999999999986  999999999999


Q ss_pred             HhhhcccccccCCC
Q psy16147        213 QHMNHRYSYCKPYR  226 (227)
Q Consensus       213 ~H~~~~h~~~~~~~  226 (227)
                      .|++. |.+++||+
T Consensus        82 ~H~~~-h~~~~~~~   94 (124)
T 1ubd_C           82 THVRI-HTGDRPYV   94 (124)
T ss_dssp             HHHHH-HHCCCCCC
T ss_pred             HHHHH-hCCCCceE
Confidence            99985 56677774

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=7.8e-18  Score=98.37  Aligned_cols=52  Identities=31%  Similarity=0.711  Sum_probs=29.5

Q ss_pred             CCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhh
Q psy16147        165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       165 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      ++||.|++|++.|.....|..|+++|.+++||.|.+|++.|.+.+.|..|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~   53 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK   53 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC
Confidence            4555555555555555555555555555555555555555555555555555

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=6.4e-18  Score=98.72  Aligned_cols=58  Identities=34%  Similarity=0.788  Sum_probs=55.7

Q ss_pred             CCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCC
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK  194 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  194 (227)
                      ++||.|++||++|.....|..|+++|+++++|.|++|++.|.....|..|+++|.|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999999999999999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.71  E-value=1.5e-18  Score=126.27  Aligned_cols=136  Identities=25%  Similarity=0.398  Sum_probs=101.5

Q ss_pred             CCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHHHhhhhhcCCCCcccccCCCCCCCccccC--cCccccCChhHHHh
Q psy16147         80 SICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCD--QCDKVFAKHSSLAR  157 (227)
Q Consensus        80 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~  157 (227)
                      ..|+..|.....|..|...+.......+.+..+...+..     ...+..+...|.++++|.|+  .|++.|.....|..
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~-----~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   92 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTS-----LHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK   92 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSS-----HHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHH
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCC-----HHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHH
Confidence            578888888777776654333222222211122211111     11122234567788999999  89999999999999


Q ss_pred             HH-hhh-cCCCCccC--CCCCcccCCchhHHHHHhhccCCCCccccc--ccccccCchhHHHhhhcccc
Q psy16147        158 HK-YEH-SGQRPYKC--VECPKAFKHKHHLTEHKRLHSGEKPFQCCK--CLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       158 H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~  220 (227)
                      |+ +.| .++++|.|  +.|++.|.....|..|++.|.++++|.|+.  |++.|.+.+.|..|++.|++
T Consensus        93 H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            99 666 36789999  899999999999999999999999999988  99999999999999997654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.70  E-value=1.3e-17  Score=105.18  Aligned_cols=78  Identities=32%  Similarity=0.720  Sum_probs=74.6

Q ss_pred             cccc--CcCccccCChhHHHhHHhhhcCCCCccCCC--CCcccCCchhHHHHHhhccCCCCccccc---ccccccCchhH
Q psy16147        139 QFLC--DQCDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCK---CLKRFSHSGSY  211 (227)
Q Consensus       139 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  211 (227)
                      +|.|  +.|++.|.....|..|++.|.++++|.|+.  |++.|.....|..|++.|.+   |.|..   |++.|.+.+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5789  999999999999999999999999999988  99999999999999999988   99999   99999999999


Q ss_pred             HHhhhccc
Q psy16147        212 SQHMNHRY  219 (227)
Q Consensus       212 ~~H~~~~h  219 (227)
                      ..|++.+|
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999775

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.8e-17  Score=116.61  Aligned_cols=93  Identities=33%  Similarity=0.634  Sum_probs=84.0

Q ss_pred             CCCCCccccCc-----CccccCChhHHHhHHhhhcCCCCccCCC--CCcccCCchhHHHHHhhccCCCCccccc--cccc
Q psy16147        134 NSGEGQFLCDQ-----CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCK--CLKR  204 (227)
Q Consensus       134 ~~~~~~~~C~~-----C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~  204 (227)
                      +.++++|.|++     |++.|.....|..|++.|.++++|.|+.  |++.|.....|..|++.|.++++|.|++  |++.
T Consensus        29 h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  108 (155)
T 2gli_A           29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA  108 (155)
T ss_dssp             SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCE
T ss_pred             CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCc
Confidence            45567777764     4599999999999999999999999985  9999999999999999999999999998  9999


Q ss_pred             ccCchhHHHhhhcccccccCCC
Q psy16147        205 FSHSGSYSQHMNHRYSYCKPYR  226 (227)
Q Consensus       205 f~~~~~l~~H~~~~h~~~~~~~  226 (227)
                      |.+.+.|..|++..|.+++||+
T Consensus       109 f~~~~~L~~H~~~~H~~~~~~~  130 (155)
T 2gli_A          109 FSNASDRAKHQNRTHSNEKPYV  130 (155)
T ss_dssp             ESSSSTTHHHHHHTTCSCCCEE
T ss_pred             cCCHHHHHHHHHHhcCCCCCee
Confidence            9999999999966888888874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.68  E-value=1.3e-16  Score=103.82  Aligned_cols=89  Identities=34%  Similarity=0.678  Sum_probs=79.4

Q ss_pred             CCCCCCCcccCCc--chhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCc
Q psy16147         34 DDNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDS  111 (227)
Q Consensus        34 ~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (227)
                      .....+++|.|.+  |++.|.+...|..|+++|.+                                             
T Consensus         8 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---------------------------------------------   42 (100)
T 2ebt_A            8 PDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG---------------------------------------------   42 (100)
T ss_dssp             CCCCSCCCEECCSSSCCCEESCHHHHHHHHHHHSC---------------------------------------------
T ss_pred             cccccCcceEcCCCCCCCcccCHHHHHHHHHHhCC---------------------------------------------
Confidence            3445678999997  99999999999999998732                                             


Q ss_pred             hHHHHhhhhhcCCCCcccccCCCCCCCccccC--cCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhh
Q psy16147        112 SERKLKSRLMMSSNGTMSCADDNSGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRL  189 (227)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  189 (227)
                                               +++|.|+  .|++.|.....|..|++.|+++++|.|++|++.|.....|..|++.
T Consensus        43 -------------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   97 (100)
T 2ebt_A           43 -------------------------EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR   97 (100)
T ss_dssp             -------------------------CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             -------------------------CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHH
Confidence                                     2468896  6999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q psy16147        190 HSG  192 (227)
Q Consensus       190 h~~  192 (227)
                      |.+
T Consensus        98 H~~  100 (100)
T 2ebt_A           98 HQN  100 (100)
T ss_dssp             HCC
T ss_pred             hCC
Confidence            864

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=5.2e-17  Score=101.02  Aligned_cols=72  Identities=35%  Similarity=0.688  Sum_probs=67.5

Q ss_pred             CCCCccccCc--CccccCChhHHHhHHh-hhcCCCCccCCC--CCcccCCchhHHHHHhhccCCCCccccccccccc
Q psy16147        135 SGEGQFLCDQ--CDKVFAKHSSLARHKY-EHSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFS  206 (227)
Q Consensus       135 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  206 (227)
                      +++++|.|..  |++.|.....|..|++ .|.++++|.|+.  |++.|.....|..|++.|.++++|.|.+|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4567889987  9999999999999999 799999999999  9999999999999999999999999999999984

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=1e-16  Score=101.95  Aligned_cols=83  Identities=37%  Similarity=0.787  Sum_probs=75.6

Q ss_pred             CCcccCCc--chhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHHH
Q psy16147         39 EGQFLCDQ--CDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKL  116 (227)
Q Consensus        39 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (227)
                      .++|.|++  |++.|.+..+|..|+++|.                                                   
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~---------------------------------------------------   31 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT---------------------------------------------------   31 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC---------------------------------------------------
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC---------------------------------------------------
Confidence            56899999  9999999999999998763                                                   


Q ss_pred             hhhhhcCCCCcccccCCCCCCCccccC--cCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhcc
Q psy16147        117 KSRLMMSSNGTMSCADDNSGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHS  191 (227)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  191 (227)
                                         ++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|.
T Consensus        32 -------------------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           32 -------------------GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             -------------------SSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             -------------------CCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence                               23568897  699999999999999999999999999999999999999999999873

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=5.8e-16  Score=95.78  Aligned_cols=66  Identities=39%  Similarity=0.875  Sum_probs=54.3

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      .+.++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            345667888888888888888888888888888888888888888888888888888888888876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.64  E-value=3.1e-17  Score=111.90  Aligned_cols=81  Identities=21%  Similarity=0.372  Sum_probs=69.6

Q ss_pred             ccccCcCccccC------ChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHH
Q psy16147        139 QFLCDQCDKVFA------KHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYS  212 (227)
Q Consensus       139 ~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  212 (227)
                      .+.|++|+..|.      ....|..|+ .|+++++|.|+.|++.|.....|..|++.|  ++||.|+.|++.|.+.+.|.
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~  117 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSAL  117 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHH
Confidence            455666665554      556677776 588899999999999999999999999999  89999999999999999999


Q ss_pred             Hhhhcccccc
Q psy16147        213 QHMNHRYSYC  222 (227)
Q Consensus       213 ~H~~~~h~~~  222 (227)
                      .|++.+|+..
T Consensus       118 ~H~~~h~~~~  127 (129)
T 2wbt_A          118 DHVCKKHNIC  127 (129)
T ss_dssp             HHHHHTTCCC
T ss_pred             HHHHHHCCcc
Confidence            9999888754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=6.8e-16  Score=97.49  Aligned_cols=76  Identities=20%  Similarity=0.422  Sum_probs=70.2

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCC----CCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccc
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQ----RPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRF  205 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  205 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.+++.    ++|.|.+|++.|.....|..|++.|.+++++.|..|+..|
T Consensus         6 H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A            6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            457788899999999999999999999999887765    7899999999999999999999999999999999999876

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=1.1e-16  Score=99.01  Aligned_cols=71  Identities=24%  Similarity=0.521  Sum_probs=60.9

Q ss_pred             HHhHHhhhcCCCCccCCCCCcccCCchhHHHHHh-hccCC-CCcccccccccccCchhHHHhhhcccccccCC
Q psy16147        155 LARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKR-LHSGE-KPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       155 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      +.+|++.|.++++|.|++|++.|.....|..|++ .|.++ ++|.|+.|++.|.+...|..|++.+|..+.|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            3467888888889999999999999999999987 57764 78999999999999999999999888888774

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=7.3e-16  Score=99.32  Aligned_cols=78  Identities=19%  Similarity=0.250  Sum_probs=68.5

Q ss_pred             ccccCChhHHHhHHhhhcCCCCccCCCCCccc-CCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccccC
Q psy16147        146 DKVFAKHSSLARHKYEHSGQRPYKCVECPKAF-KHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKP  224 (227)
Q Consensus       146 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  224 (227)
                      ...|.....+..|++.+.++++|.|+.|++.| .....|..|++.| ++++|.|.+|++.|.+.+.|..|++..|++ +|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~-~p   90 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS-LP   90 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC-CS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC-CC
Confidence            34667778899999999999999999999999 9999999999999 999999999999999999999994445665 44


Q ss_pred             C
Q psy16147        225 Y  225 (227)
Q Consensus       225 ~  225 (227)
                      |
T Consensus        91 ~   91 (96)
T 2ctd_A           91 S   91 (96)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=7.8e-16  Score=99.82  Aligned_cols=72  Identities=28%  Similarity=0.462  Sum_probs=65.0

Q ss_pred             CCCCCCCccccCcCccccCChhHHHhHHh-hh---cCCCCccCCCCCcccCCchhHHHH-HhhccCCCCcccccccc
Q psy16147        132 DDNSGEGQFLCDQCDKVFAKHSSLARHKY-EH---SGQRPYKCVECPKAFKHKHHLTEH-KRLHSGEKPFQCCKCLK  203 (227)
Q Consensus       132 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  203 (227)
                      +...++++|.|+.|++.|.....|..|++ .|   .++++|.|++|++.|.....|..| ++.|.+++||.|.++..
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            34577899999999999999999999997 58   568899999999999999999999 89999999999998643

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.6e-15  Score=94.19  Aligned_cols=72  Identities=31%  Similarity=0.560  Sum_probs=65.0

Q ss_pred             CCCCcccCCc--chhhhcChhHHHHHHH-hccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchH
Q psy16147         37 SGEGQFLCDQ--CDKVFAKHSSLARHKY-EHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSE  113 (227)
Q Consensus        37 ~~~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (227)
                      +++++|.|..  |++.|.+..+|..|++ .|.                                                
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~------------------------------------------------   34 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI------------------------------------------------   34 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG------------------------------------------------
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC------------------------------------------------
Confidence            5688999997  9999999999999998 562                                                


Q ss_pred             HHHhhhhhcCCCCcccccCCCCCCCccccCc--CccccCChhHHHhHHhhhcCCCCccCCCCCcccC
Q psy16147        114 RKLKSRLMMSSNGTMSCADDNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFK  178 (227)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  178 (227)
                                            ++++|.|++  |++.|.....|..|++.|+++++|.|++|++.|.
T Consensus        35 ----------------------~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           35 ----------------------HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             ----------------------SCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             ----------------------CCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence                                  235689999  9999999999999999999999999999999883

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=2.5e-16  Score=102.12  Aligned_cols=76  Identities=14%  Similarity=0.243  Sum_probs=56.7

Q ss_pred             cCChhHHHhHHhhhcCCCCccCCCCCcccC-CchhHHHHHhhccC-CCCcccccccccccCchhHHHhhhcccccccCC
Q psy16147        149 FAKHSSLARHKYEHSGQRPYKCVECPKAFK-HKHHLTEHKRLHSG-EKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       149 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      +.....+..|++.|.++++|.|.+|++.|. ....|..|++.|.+ +++|.|.+|++.|.+...|..|++.+| +++|+
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~-~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH-SAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS-CSCSS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc-CCCCC
Confidence            344455667777788888888888888888 88888888888777 778888888888888888888887554 44443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=8.2e-16  Score=96.31  Aligned_cols=59  Identities=24%  Similarity=0.368  Sum_probs=34.0

Q ss_pred             CCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccc
Q psy16147        164 GQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYC  222 (227)
Q Consensus       164 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  222 (227)
                      +.++|.|++|++.|.....|..|++.|.+++||.|.+|++.|.+...|..|++..|+++
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            44555555555555555555555555555555666666666666666666655455444

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=2.6e-15  Score=92.04  Aligned_cols=63  Identities=38%  Similarity=0.868  Sum_probs=42.3

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCc
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF  196 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  196 (227)
                      +.+.++|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|.+++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            345566777777777777777777776666666666666666666666666666666666654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.58  E-value=6.2e-17  Score=102.89  Aligned_cols=81  Identities=23%  Similarity=0.391  Sum_probs=73.9

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHHHhh
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKS  118 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (227)
                      +++|.|.+|++.|.+..+|..|+++|.+                                                    
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~----------------------------------------------------   28 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG----------------------------------------------------   28 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC----------------------------------------------------
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC----------------------------------------------------
Confidence            5789999999999999999999998732                                                    


Q ss_pred             hhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhc
Q psy16147        119 RLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  190 (227)
                                        +++|.|++|++.|.....|..|++.|++ .+|.|+.|++.|.....|..|++.+
T Consensus        29 ------------------~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C           29 ------------------EKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             ------------------CCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------------CCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHH
Confidence                              3568999999999999999999999985 7899999999999999999998863

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=2.5e-15  Score=92.14  Aligned_cols=64  Identities=36%  Similarity=0.748  Sum_probs=59.6

Q ss_pred             hhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccccCC
Q psy16147        161 EHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       161 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      .+.++++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.+...|..|++. |++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI-HSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHH-HCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHh-cCCCCCC
Confidence            456789999999999999999999999999999999999999999999999999984 6788887

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=8.5e-15  Score=92.34  Aligned_cols=82  Identities=23%  Similarity=0.428  Sum_probs=71.1

Q ss_pred             cccCCCCCCCCcccCCcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCC
Q psy16147         30 MSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDE  109 (227)
Q Consensus        30 ~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (227)
                      ..|...|+++++|.|.+|++.|....+|..|++.|+...                                         
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~-----------------------------------------   42 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN-----------------------------------------   42 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS-----------------------------------------
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc-----------------------------------------
Confidence            456778999999999999999999999999998764211                                         


Q ss_pred             CchHHHHhhhhhcCCCCcccccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCccc
Q psy16147        110 DSSERKLKSRLMMSSNGTMSCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAF  177 (227)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  177 (227)
                                               ..+++|.|++|++.|.....|..|++.|++++++.|..|+..+
T Consensus        43 -------------------------~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           43 -------------------------FVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             -------------------------CCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             -------------------------CCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence                                     1135799999999999999999999999999999999998765

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=5.1e-15  Score=91.46  Aligned_cols=65  Identities=35%  Similarity=0.705  Sum_probs=60.3

Q ss_pred             hhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccccCCC
Q psy16147        161 EHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR  226 (227)
Q Consensus       161 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  226 (227)
                      .+.++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.+...|..|++ .|.+++||+
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~p~~   76 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR-VHTGSGPSS   76 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG-GSCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH-HhCCCCCCC
Confidence            35578999999999999999999999999999999999999999999999999998 567889985

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=3.6e-15  Score=93.82  Aligned_cols=78  Identities=32%  Similarity=0.650  Sum_probs=71.2

Q ss_pred             cccC--CcchhhhcChhHHHHHHHhccccccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCccCCCCCchHHHHhh
Q psy16147         41 QFLC--DQCDKVFAKHSSLARHKYEHSVLQKCSSSYNYPRHSICNRPTASYPELSDMGSLEGDESLDRMDEDSSERKLKS  118 (227)
Q Consensus        41 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (227)
                      ||.|  ++||+.|.+..+|..|+++|.+                                                    
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~----------------------------------------------------   28 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ----------------------------------------------------   28 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT----------------------------------------------------
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC----------------------------------------------------
Confidence            5899  9999999999999999998732                                                    


Q ss_pred             hhhcCCCCcccccCCCCCCCccccCc--CccccCChhHHHhHHhhhcCCCCccCCC---CCcccCCchhHHHHHhhcc
Q psy16147        119 RLMMSSNGTMSCADDNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCVE---CPKAFKHKHHLTEHKRLHS  191 (227)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~  191 (227)
                                        +++|.|+.  |++.|.....|..|++.|++   |.|..   |++.|.....|..|++.|.
T Consensus        29 ------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           29 ------------------QLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ------------------TCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             ------------------CCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence                              35689988  99999999999999999988   99999   9999999999999998863

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=2.3e-15  Score=93.24  Aligned_cols=64  Identities=27%  Similarity=0.378  Sum_probs=37.4

Q ss_pred             hcCCCCccCCCCCcccCCchhHHHHHhhccC---CCCcccccccccccCchhHHHhhhcccccccCC
Q psy16147        162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSG---EKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       162 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      |.++++|.|++|++.|.....|..|++.|.+   +++|.|.+|++.|.+...|..|++.+|.+.+|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4455555565566666555555556555553   556666666666666666666665555555544

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.7e-15  Score=91.46  Aligned_cols=60  Identities=42%  Similarity=0.883  Sum_probs=29.2

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG  192 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  192 (227)
                      .|.++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|.+
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            344444455555555555555555554444444444444444444444444444444443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.2e-14  Score=88.10  Aligned_cols=61  Identities=25%  Similarity=0.480  Sum_probs=37.7

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCC
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKP  195 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  195 (227)
                      .++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|.+++|
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            4455666666666666666666666666666666666666666666666666666655554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.53  E-value=5e-15  Score=85.92  Aligned_cols=55  Identities=29%  Similarity=0.532  Sum_probs=37.8

Q ss_pred             CCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhccc
Q psy16147        165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       165 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      +++|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|++.+|
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4567777777777777777777777777777777777777777777777777655

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=2.1e-14  Score=89.91  Aligned_cols=63  Identities=25%  Similarity=0.470  Sum_probs=57.5

Q ss_pred             CCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHH-hhccCCC
Q psy16147        132 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHK-RLHSGEK  194 (227)
Q Consensus       132 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  194 (227)
                      ..+...++|.|++|++.|.....|..|++.|+++++|.|++|++.|.....|..|+ +.|.+++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            44566788999999999999999999999999999999999999999999999997 5688775

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=7.1e-15  Score=89.08  Aligned_cols=63  Identities=29%  Similarity=0.493  Sum_probs=57.6

Q ss_pred             hhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccccC
Q psy16147        161 EHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKP  224 (227)
Q Consensus       161 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  224 (227)
                      .|.++++|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.+...|..|++.+| +++|
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH-GDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHH-SSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHh-CCCC
Confidence            36678999999999999999999999999999999999999999999999999999665 4454

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.6e-14  Score=88.05  Aligned_cols=63  Identities=43%  Similarity=0.809  Sum_probs=58.4

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSY  221 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  221 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.+...|..|++.|+.+
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            456889999999999999999999999999999999999999999999999999999976543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=4.8e-15  Score=88.71  Aligned_cols=61  Identities=21%  Similarity=0.581  Sum_probs=47.1

Q ss_pred             hhhcCCCCccCCCCCcccCCchhHHHHHhh-c-cCCCCcccccccccccCchhHHHhhhcccc
Q psy16147        160 YEHSGQRPYKCVECPKAFKHKHHLTEHKRL-H-SGEKPFQCCKCLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       160 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  220 (227)
                      +.|.++++|.|+.|++.|.....|..|++. | .++++|.|+.|++.|.+.+.|..|++.+|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            356677778888888888888888888776 6 477788888888888888888888877664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.3e-14  Score=94.06  Aligned_cols=65  Identities=15%  Similarity=0.206  Sum_probs=58.1

Q ss_pred             hcCCCCccCCCCCcccCCchhHHHHHh-hc---cCCCCcccccccccccCchhHHHhhhcccccccCCC
Q psy16147        162 HSGQRPYKCVECPKAFKHKHHLTEHKR-LH---SGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR  226 (227)
Q Consensus       162 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  226 (227)
                      ..|+++|.|+.|++.|.....|..|++ .|   .+++||.|..|++.|.+.+.|..|+...|++++||+
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~   81 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFK   81 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCee
Confidence            347899999999999999999999998 49   668999999999999999999999444778999984

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.49  E-value=3e-14  Score=82.57  Aligned_cols=54  Identities=30%  Similarity=0.648  Sum_probs=32.3

Q ss_pred             CccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccc
Q psy16147        167 PYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  220 (227)
                      +|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|++.++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            355666666666666666666666666666666666666666666666654443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.5e-14  Score=93.68  Aligned_cols=70  Identities=26%  Similarity=0.385  Sum_probs=64.0

Q ss_pred             ccCCCCCCCccccCcCccccC-ChhHHHhHHhhhcC-CCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        130 CADDNSGEGQFLCDQCDKVFA-KHSSLARHKYEHSG-QRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      +.+.|.++++|.|++|++.|. ....|..|++.|++ +++|.|.+|++.|.....|..|++.|.+++|+...
T Consensus        15 h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           15 WQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             HHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             HHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            345678889999999999999 99999999999998 99999999999999999999999999999886543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.3e-14  Score=82.83  Aligned_cols=57  Identities=32%  Similarity=0.639  Sum_probs=38.5

Q ss_pred             CCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccc
Q psy16147        166 RPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYC  222 (227)
Q Consensus       166 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  222 (227)
                      ++|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.+...|..|++..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            356677777777777777777777777777777777777777777777765455443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.46  E-value=4.7e-14  Score=81.72  Aligned_cols=55  Identities=33%  Similarity=0.555  Sum_probs=50.5

Q ss_pred             CCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhcc
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHS  191 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  191 (227)
                      +++|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999999999999999999999875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.46  E-value=7.2e-14  Score=80.93  Aligned_cols=56  Identities=34%  Similarity=0.699  Sum_probs=53.6

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK  194 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  194 (227)
                      +|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58899999999999999999999999999999999999999999999999998775

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=4.3e-13  Score=82.68  Aligned_cols=66  Identities=26%  Similarity=0.525  Sum_probs=58.0

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHh-hhcCC-CCccCCCCCcccCCchhHHHHHhh-ccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKY-EHSGQ-RPYKCVECPKAFKHKHHLTEHKRL-HSGEKP  195 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~  195 (227)
                      +.+.|.++++|.|++|++.|.....|..|++ .|.++ ++|.|+.|++.|.....|..|++. |..+.|
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4578889999999999999999999999997 56664 899999999999999999999998 544544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=3e-13  Score=83.58  Aligned_cols=66  Identities=21%  Similarity=0.395  Sum_probs=59.4

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcC---CCCccCCCCCcccCCchhHHHHHh-hccCCCCcccc
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSG---QRPYKCVECPKAFKHKHHLTEHKR-LHSGEKPFQCC  199 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  199 (227)
                      |+++++|.|++|++.|.....|..|++.|.+   +++|.|..|++.|.....|..|++ .|.++.+....
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            5678999999999999999999999999996   899999999999999999999994 58888776543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3.5e-13  Score=78.82  Aligned_cols=57  Identities=35%  Similarity=0.845  Sum_probs=52.7

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHH-hhccCCC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHK-RLHSGEK  194 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  194 (227)
                      ++|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+ +.|.++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            46899999999999999999999999999999999999999999999997 6787653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.5e-13  Score=82.13  Aligned_cols=61  Identities=28%  Similarity=0.588  Sum_probs=55.4

Q ss_pred             CCCCCCCccccCcCccccCChhHHHhHHhh-h-cCCCCccCCCCCcccCCchhHHHHHhhccC
Q psy16147        132 DDNSGEGQFLCDQCDKVFAKHSSLARHKYE-H-SGQRPYKCVECPKAFKHKHHLTEHKRLHSG  192 (227)
Q Consensus       132 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  192 (227)
                      ..|.++++|.|+.|++.|.....|..|++. | .++++|.|+.|++.|.....|..|++.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            346678999999999999999999999998 6 488999999999999999999999998764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=5.5e-13  Score=85.61  Aligned_cols=63  Identities=30%  Similarity=0.424  Sum_probs=55.4

Q ss_pred             CCccccCcCccccCChhHHHhHHhh-hcCCCC--------ccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYE-HSGQRP--------YKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      ...+.|++|++.|.....|..|++. |.++++        |.|+.|++.|.....|..|+++|.+++||.|.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3457899999999999999999987 888776        89999999999999999999999999999885

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=7.7e-13  Score=85.06  Aligned_cols=62  Identities=19%  Similarity=0.329  Sum_probs=56.0

Q ss_pred             CCCccccCcCcccc-CChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHH-HhhccCCCCccc
Q psy16147        136 GEGQFLCDQCDKVF-AKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEH-KRLHSGEKPFQC  198 (227)
Q Consensus       136 ~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C  198 (227)
                      ++++|.|++|++.| .....|..|++.| ++++|.|.+|++.|.....|..| ++.|.++..+.+
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            45789999999999 9999999999999 99999999999999999999999 888986554443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.4e-14  Score=88.31  Aligned_cols=65  Identities=22%  Similarity=0.380  Sum_probs=48.5

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      +.+.|.++++|.|++|++.|.....|..       +++|.|+.|++.|.....|..|++.|.++++|.|++|
T Consensus         9 H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            9 RQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3456677777888888888877776665       5677777777777777777777777777777777766

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.36  E-value=2.3e-13  Score=92.55  Aligned_cols=58  Identities=22%  Similarity=0.367  Sum_probs=53.9

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCC
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE  193 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  193 (227)
                      +.++++|.|++|++.|.....|..|++.|  +++|.|+.|++.|.....|..|++.|.++
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            34568899999999999999999999998  78999999999999999999999998875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=5e-13  Score=81.44  Aligned_cols=57  Identities=35%  Similarity=0.769  Sum_probs=29.5

Q ss_pred             CCCCCccccC--cCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhc
Q psy16147        134 NSGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       134 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  190 (227)
                      +.++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            4444555554  35555555555555555555555555555555555555555555444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.3e-12  Score=79.62  Aligned_cols=58  Identities=38%  Similarity=0.845  Sum_probs=54.3

Q ss_pred             hhcCCCCccCC--CCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcc
Q psy16147        161 EHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       161 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      .+.++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|.+...|..|++.|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            46688999997  59999999999999999999999999999999999999999999865

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=3.7e-14  Score=86.46  Aligned_cols=67  Identities=24%  Similarity=0.348  Sum_probs=59.7

Q ss_pred             hhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccccCCC
Q psy16147        152 HSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR  226 (227)
Q Consensus       152 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  226 (227)
                      ...|..|++.|.++++|.|+.|++.|.....|..       +++|.|+.|++.|.+.+.|..|++. |.+++||+
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~-H~~~~~~~   69 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGN-ESGKKTSG   69 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSC-CCCCCCSS
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHh-hcCCCCCC
Confidence            3467789999999999999999999999988865       7899999999999999999999985 67888885

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.6e-12  Score=71.62  Aligned_cols=44  Identities=39%  Similarity=0.779  Sum_probs=26.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44555555666666666666666666666666666666666554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.27  E-value=1.7e-12  Score=71.51  Aligned_cols=44  Identities=30%  Similarity=0.539  Sum_probs=25.4

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            44555555555555566555555555555555555555555554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.27  E-value=1.6e-12  Score=71.68  Aligned_cols=44  Identities=41%  Similarity=0.807  Sum_probs=24.6

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=4.1e-12  Score=75.79  Aligned_cols=58  Identities=22%  Similarity=0.481  Sum_probs=37.9

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC-CCCcccCCchhHHHHHhhccCCC
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV-ECPKAFKHKHHLTEHKRLHSGEK  194 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~  194 (227)
                      -+.++|.|+.|++.|. ...|..|++. .++++|.|+ .|++.|.....|..|++.|....
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            3456666777777777 6667767666 666666666 66666666666666666665443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=71.31  Aligned_cols=44  Identities=39%  Similarity=0.661  Sum_probs=25.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            44555555555565566556555555555555555555555554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.26  E-value=1.6e-12  Score=71.62  Aligned_cols=44  Identities=34%  Similarity=0.624  Sum_probs=25.0

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.26  E-value=1.7e-12  Score=71.53  Aligned_cols=44  Identities=34%  Similarity=0.711  Sum_probs=24.0

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.26  E-value=2.6e-12  Score=70.78  Aligned_cols=44  Identities=39%  Similarity=0.767  Sum_probs=24.4

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.1e-12  Score=71.16  Aligned_cols=44  Identities=30%  Similarity=0.567  Sum_probs=26.4

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555666666666666666666666666666666666554

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=71.51  Aligned_cols=44  Identities=39%  Similarity=0.775  Sum_probs=23.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2e-12  Score=71.23  Aligned_cols=44  Identities=32%  Similarity=0.642  Sum_probs=26.1

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555566666666666666666666666666666666554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2e-12  Score=71.22  Aligned_cols=44  Identities=32%  Similarity=0.671  Sum_probs=27.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.2e-12  Score=71.12  Aligned_cols=44  Identities=32%  Similarity=0.640  Sum_probs=23.9

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=71.60  Aligned_cols=44  Identities=41%  Similarity=0.736  Sum_probs=23.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|+++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.1e-12  Score=71.21  Aligned_cols=44  Identities=34%  Similarity=0.666  Sum_probs=25.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555556666666666655556556555555555655554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.2e-12  Score=71.08  Aligned_cols=44  Identities=41%  Similarity=0.785  Sum_probs=25.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555555556666666666666666666555655566665554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=71.48  Aligned_cols=44  Identities=39%  Similarity=0.776  Sum_probs=22.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555444

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=71.39  Aligned_cols=44  Identities=41%  Similarity=0.815  Sum_probs=24.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.5e-12  Score=70.88  Aligned_cols=44  Identities=39%  Similarity=0.658  Sum_probs=25.8

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555555556666666666666666666655655666665554

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.9e-12  Score=71.35  Aligned_cols=44  Identities=39%  Similarity=0.779  Sum_probs=24.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.7e-12  Score=71.55  Aligned_cols=44  Identities=45%  Similarity=0.800  Sum_probs=24.6

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.7e-12  Score=71.52  Aligned_cols=44  Identities=39%  Similarity=0.640  Sum_probs=23.1

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.3e-12  Score=71.05  Aligned_cols=44  Identities=34%  Similarity=0.697  Sum_probs=25.9

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555566666666666666666666666666666666554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.9e-12  Score=71.34  Aligned_cols=44  Identities=34%  Similarity=0.622  Sum_probs=24.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=70.29  Aligned_cols=43  Identities=33%  Similarity=0.601  Sum_probs=21.1

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      ++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444455555555555555555555555555555555444

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.7e-12  Score=71.59  Aligned_cols=44  Identities=36%  Similarity=0.736  Sum_probs=23.9

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.2e-12  Score=70.44  Aligned_cols=44  Identities=34%  Similarity=0.764  Sum_probs=23.9

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=70.28  Aligned_cols=44  Identities=43%  Similarity=0.671  Sum_probs=23.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=70.78  Aligned_cols=44  Identities=34%  Similarity=0.532  Sum_probs=26.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555666666666666666666666666666666666554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.9e-12  Score=71.38  Aligned_cols=44  Identities=41%  Similarity=0.717  Sum_probs=21.4

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444445555555555555555555444544555554443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.25  E-value=2.5e-12  Score=70.86  Aligned_cols=44  Identities=39%  Similarity=0.737  Sum_probs=23.3

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.2e-12  Score=71.12  Aligned_cols=44  Identities=43%  Similarity=0.824  Sum_probs=23.1

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.3e-12  Score=70.30  Aligned_cols=41  Identities=32%  Similarity=0.544  Sum_probs=20.2

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444445555555555555555555555544445554443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.1e-12  Score=70.48  Aligned_cols=44  Identities=36%  Similarity=0.677  Sum_probs=22.1

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444445555555555555555555555555555555555444

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2e-12  Score=71.29  Aligned_cols=44  Identities=39%  Similarity=0.782  Sum_probs=24.1

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.4e-12  Score=70.93  Aligned_cols=44  Identities=32%  Similarity=0.397  Sum_probs=24.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.1e-12  Score=71.23  Aligned_cols=44  Identities=39%  Similarity=0.575  Sum_probs=22.9

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=70.67  Aligned_cols=44  Identities=39%  Similarity=0.744  Sum_probs=22.9

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=71.17  Aligned_cols=44  Identities=39%  Similarity=0.801  Sum_probs=22.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|+++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555444

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.22  E-value=2.4e-13  Score=80.14  Aligned_cols=57  Identities=14%  Similarity=0.331  Sum_probs=42.9

Q ss_pred             HhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhh
Q psy16147        156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM  215 (227)
Q Consensus       156 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  215 (227)
                      ..|++.|.++++|.|+.|++.|.....|.   +.|.+++||.|+.|++.|....++..+.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccccc
Confidence            45677777888888888888887776664   6788888888888888888776665443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.3e-12  Score=70.36  Aligned_cols=44  Identities=36%  Similarity=0.777  Sum_probs=25.0

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|+++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555543

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=4.4e-12  Score=69.87  Aligned_cols=43  Identities=40%  Similarity=0.663  Sum_probs=21.0

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      ++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444445555555555555555555544554555554444

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.7e-12  Score=70.20  Aligned_cols=41  Identities=34%  Similarity=0.624  Sum_probs=19.9

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444445555555555555555555444444444444443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.22  E-value=4.5e-12  Score=69.81  Aligned_cols=43  Identities=37%  Similarity=0.651  Sum_probs=20.6

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      ++.|.++++|.|++|++.|.....|..|++.|.+++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=1.4e-11  Score=78.92  Aligned_cols=60  Identities=20%  Similarity=0.237  Sum_probs=55.2

Q ss_pred             CCccCCCCCcccCCchhHHHHHhh-ccCCCC--------cccccccccccCchhHHHhhhcccccccCCC
Q psy16147        166 RPYKCVECPKAFKHKHHLTEHKRL-HSGEKP--------FQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR  226 (227)
Q Consensus       166 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  226 (227)
                      ..+.|..|++.|.....|..|++. |.++++        |.|..|++.|.+...|..|++ .|++++||+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~   92 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGP   92 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-HHHTCCCCS
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH-hcCCCCCCC
Confidence            457899999999999999999998 999887        999999999999999999999 468889985

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=70.30  Aligned_cols=41  Identities=27%  Similarity=0.568  Sum_probs=20.1

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34444445555555555555555555544444444444443

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.6e-12  Score=69.79  Aligned_cols=43  Identities=28%  Similarity=0.374  Sum_probs=20.5

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      ++.|.++++|.|++|++.|.....|..|++.|.+++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.9e-12  Score=70.60  Aligned_cols=42  Identities=31%  Similarity=0.646  Sum_probs=21.8

Q ss_pred             CCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        132 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       132 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            344445555555555555555555555555555555555444

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.9e-12  Score=74.76  Aligned_cols=54  Identities=22%  Similarity=0.426  Sum_probs=50.6

Q ss_pred             cCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc-cccccccCchhHHHhhhcc
Q psy16147        163 SGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC-KCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       163 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~  218 (227)
                      .+.++|.|+.|++.|. ...|..|++. .+++||.|+ .|++.|..++.|..|++.|
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            4678999999999999 9999999999 999999999 9999999999999999854

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=1.1e-11  Score=70.67  Aligned_cols=45  Identities=27%  Similarity=0.496  Sum_probs=26.3

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHh-hhcCCCCccCCCCCcccC
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKY-EHSGQRPYKCVECPKAFK  178 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~  178 (227)
                      +.++++|.|++|++.|.....|..|++ .|.++++|.|++|++.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            444555666666666666666666654 555555666666665554

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.20  E-value=1.2e-11  Score=74.99  Aligned_cols=57  Identities=32%  Similarity=0.743  Sum_probs=33.9

Q ss_pred             CCCCCccccCc--CccccCChhHHHhHHhhhcCCCCccCCC--CCcccCCchhHHHHHhhc
Q psy16147        134 NSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCVE--CPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       134 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  190 (227)
                      ....++|.|+.  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|++.|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34445666665  6666666666666666666666666643  666666666665555543

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.5e-12  Score=69.45  Aligned_cols=44  Identities=39%  Similarity=0.723  Sum_probs=24.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHh-hccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKR-LHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++ .|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555554

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.20  E-value=3.1e-11  Score=73.17  Aligned_cols=57  Identities=39%  Similarity=0.737  Sum_probs=52.2

Q ss_pred             hcCCCCccCCC--CCcccCCchhHHHHHhhccCCCCccccc--ccccccCchhHHHhhhcc
Q psy16147        162 HSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCCK--CLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       162 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  218 (227)
                      ....++|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.+...|..|++.|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34568899998  9999999999999999999999999975  999999999999999854

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.6e-12  Score=69.42  Aligned_cols=42  Identities=24%  Similarity=0.440  Sum_probs=21.8

Q ss_pred             CCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        132 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       132 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            344445555555555555555555555555555555555544

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.3e-12  Score=68.72  Aligned_cols=43  Identities=44%  Similarity=0.830  Sum_probs=21.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK  200 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  200 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3344444445555555555555555555555555555555543

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.7e-11  Score=66.07  Aligned_cols=44  Identities=20%  Similarity=0.397  Sum_probs=41.0

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34678899999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.17  E-value=3.6e-11  Score=66.09  Aligned_cols=44  Identities=30%  Similarity=0.564  Sum_probs=41.0

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=4.3e-11  Score=68.23  Aligned_cols=47  Identities=32%  Similarity=0.644  Sum_probs=43.8

Q ss_pred             hhcCCCCccCCCCCcccCCchhHHHHHh-hccCCCCcccccccccccC
Q psy16147        161 EHSGQRPYKCVECPKAFKHKHHLTEHKR-LHSGEKPFQCCKCLKRFSH  207 (227)
Q Consensus       161 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  207 (227)
                      .|.++++|.|++|++.|.....|..|++ .|.++++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3667899999999999999999999997 8999999999999999976

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4e-11  Score=65.91  Aligned_cols=43  Identities=33%  Similarity=0.691  Sum_probs=40.5

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=3.3e-11  Score=65.54  Aligned_cols=44  Identities=34%  Similarity=0.553  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56789999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.16  E-value=4.3e-11  Score=65.79  Aligned_cols=44  Identities=30%  Similarity=0.548  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            34678889999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.16  E-value=4.3e-11  Score=65.79  Aligned_cols=43  Identities=26%  Similarity=0.617  Sum_probs=40.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|+++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.9e-11  Score=65.95  Aligned_cols=44  Identities=30%  Similarity=0.573  Sum_probs=40.9

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.1e-11  Score=65.84  Aligned_cols=43  Identities=33%  Similarity=0.658  Sum_probs=40.5

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=4.1e-11  Score=65.86  Aligned_cols=43  Identities=26%  Similarity=0.546  Sum_probs=40.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            4 GSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.9e-11  Score=65.50  Aligned_cols=44  Identities=27%  Similarity=0.476  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.1e-11  Score=65.83  Aligned_cols=43  Identities=28%  Similarity=0.597  Sum_probs=40.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.4e-11  Score=65.73  Aligned_cols=43  Identities=30%  Similarity=0.556  Sum_probs=40.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            4 GSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4e-11  Score=65.87  Aligned_cols=44  Identities=25%  Similarity=0.552  Sum_probs=40.9

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.15  E-value=4.3e-11  Score=65.78  Aligned_cols=44  Identities=30%  Similarity=0.694  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.7e-11  Score=66.02  Aligned_cols=43  Identities=33%  Similarity=0.678  Sum_probs=40.5

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.7e-11  Score=65.61  Aligned_cols=43  Identities=30%  Similarity=0.610  Sum_probs=40.5

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.15  E-value=3.9e-11  Score=65.93  Aligned_cols=44  Identities=27%  Similarity=0.507  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4e-11  Score=65.88  Aligned_cols=44  Identities=25%  Similarity=0.605  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.2e-11  Score=65.39  Aligned_cols=44  Identities=32%  Similarity=0.644  Sum_probs=40.9

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.1e-11  Score=65.85  Aligned_cols=44  Identities=27%  Similarity=0.599  Sum_probs=40.9

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.14  E-value=4.8e-11  Score=65.54  Aligned_cols=43  Identities=30%  Similarity=0.570  Sum_probs=40.5

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            4 GSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.6e-11  Score=65.64  Aligned_cols=44  Identities=32%  Similarity=0.671  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=4.8e-11  Score=65.57  Aligned_cols=43  Identities=33%  Similarity=0.572  Sum_probs=40.5

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.4e-11  Score=65.73  Aligned_cols=44  Identities=27%  Similarity=0.604  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.9e-11  Score=65.53  Aligned_cols=43  Identities=33%  Similarity=0.604  Sum_probs=40.3

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4667888999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5e-11  Score=65.50  Aligned_cols=44  Identities=32%  Similarity=0.644  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=4.3e-11  Score=65.79  Aligned_cols=44  Identities=23%  Similarity=0.456  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.1e-11  Score=65.46  Aligned_cols=44  Identities=27%  Similarity=0.483  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.3e-11  Score=65.77  Aligned_cols=43  Identities=35%  Similarity=0.717  Sum_probs=40.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.6e-11  Score=65.67  Aligned_cols=44  Identities=39%  Similarity=0.772  Sum_probs=42.1

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=5.8e-11  Score=65.25  Aligned_cols=43  Identities=23%  Similarity=0.477  Sum_probs=40.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.6e-11  Score=65.65  Aligned_cols=44  Identities=27%  Similarity=0.486  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2e-11  Score=67.16  Aligned_cols=42  Identities=40%  Similarity=0.827  Sum_probs=22.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.1e-11  Score=65.45  Aligned_cols=43  Identities=30%  Similarity=0.573  Sum_probs=40.3

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            4 GSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4677889999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.1e-11  Score=65.85  Aligned_cols=44  Identities=32%  Similarity=0.715  Sum_probs=42.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            77889999999999999999999999999999999999999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.3e-11  Score=66.93  Aligned_cols=42  Identities=40%  Similarity=0.819  Sum_probs=22.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.1e-11  Score=67.02  Aligned_cols=42  Identities=40%  Similarity=0.795  Sum_probs=22.9

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5e-11  Score=65.48  Aligned_cols=43  Identities=33%  Similarity=0.636  Sum_probs=40.3

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            4 GSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4677889999999999999999999999999999999999987

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=67.50  Aligned_cols=42  Identities=43%  Similarity=0.759  Sum_probs=22.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.1e-11  Score=65.85  Aligned_cols=44  Identities=25%  Similarity=0.585  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=5.6e-11  Score=65.30  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.2e-11  Score=65.82  Aligned_cols=44  Identities=34%  Similarity=0.696  Sum_probs=40.9

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.2e-11  Score=66.96  Aligned_cols=42  Identities=36%  Similarity=0.777  Sum_probs=23.8

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.8e-11  Score=65.57  Aligned_cols=44  Identities=27%  Similarity=0.628  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.3e-11  Score=65.37  Aligned_cols=44  Identities=23%  Similarity=0.383  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.7e-11  Score=65.25  Aligned_cols=44  Identities=27%  Similarity=0.579  Sum_probs=40.7

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.3e-11  Score=65.37  Aligned_cols=44  Identities=32%  Similarity=0.632  Sum_probs=40.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.9e-11  Score=65.54  Aligned_cols=45  Identities=40%  Similarity=0.702  Sum_probs=42.6

Q ss_pred             hHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       157 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      .|++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.13  E-value=1.6e-11  Score=67.60  Aligned_cols=42  Identities=36%  Similarity=0.782  Sum_probs=20.4

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444455555555555555555554445444444443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=5.7e-11  Score=65.23  Aligned_cols=43  Identities=30%  Similarity=0.446  Sum_probs=40.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999987

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.2e-11  Score=66.96  Aligned_cols=42  Identities=40%  Similarity=0.832  Sum_probs=23.0

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.12  E-value=2.5e-11  Score=65.36  Aligned_cols=39  Identities=44%  Similarity=0.804  Sum_probs=18.7

Q ss_pred             hhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        160 YEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       160 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      +.|.++++|.|+.|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.8e-11  Score=65.24  Aligned_cols=44  Identities=41%  Similarity=0.709  Sum_probs=42.0

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999987

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.8e-11  Score=66.54  Aligned_cols=42  Identities=36%  Similarity=0.759  Sum_probs=22.4

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2.1e-11  Score=67.08  Aligned_cols=42  Identities=50%  Similarity=0.853  Sum_probs=20.6

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            334444444555555555555555555555555555555443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.6e-11  Score=66.72  Aligned_cols=42  Identities=38%  Similarity=0.688  Sum_probs=22.9

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.9e-11  Score=67.20  Aligned_cols=42  Identities=43%  Similarity=0.763  Sum_probs=20.0

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2e-11  Score=67.17  Aligned_cols=42  Identities=40%  Similarity=0.823  Sum_probs=21.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444455555555555555555555555555555555543

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=66.89  Aligned_cols=42  Identities=40%  Similarity=0.784  Sum_probs=22.8

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.5e-11  Score=66.73  Aligned_cols=42  Identities=43%  Similarity=0.809  Sum_probs=23.0

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=67.25  Aligned_cols=42  Identities=45%  Similarity=0.870  Sum_probs=22.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.5e-11  Score=66.69  Aligned_cols=42  Identities=43%  Similarity=0.844  Sum_probs=20.8

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            334444444555555555555555555555555555555443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.7e-11  Score=66.07  Aligned_cols=42  Identities=40%  Similarity=0.774  Sum_probs=23.6

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3e-11  Score=66.41  Aligned_cols=42  Identities=43%  Similarity=0.753  Sum_probs=21.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            344444555555555555555555555555555555555543

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.9e-11  Score=66.50  Aligned_cols=41  Identities=34%  Similarity=0.596  Sum_probs=22.7

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=66.23  Aligned_cols=41  Identities=41%  Similarity=0.812  Sum_probs=20.1

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      ++.|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            33444444555555555555555555555445555555443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3e-11  Score=66.43  Aligned_cols=42  Identities=38%  Similarity=0.717  Sum_probs=20.8

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            334444445555555555555555555555555555555443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.7e-11  Score=66.62  Aligned_cols=42  Identities=45%  Similarity=0.871  Sum_probs=21.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344444455555555555555555555555555555555543

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.6e-11  Score=64.24  Aligned_cols=39  Identities=28%  Similarity=0.709  Sum_probs=18.7

Q ss_pred             hhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        160 YEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       160 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      +.|.++++|.|+.|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=65.48  Aligned_cols=41  Identities=39%  Similarity=0.656  Sum_probs=22.2

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            44445555555555555555555555555555555555554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=9.3e-11  Score=64.39  Aligned_cols=44  Identities=27%  Similarity=0.579  Sum_probs=40.4

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.1e-10  Score=64.31  Aligned_cols=43  Identities=28%  Similarity=0.560  Sum_probs=40.3

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHh-hhcCCCCccCCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKY-EHSGQRPYKCVEC  173 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  173 (227)
                      .+.|.++++|.|++|++.|.....|..|++ .|.++++|.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            467888999999999999999999999999 9999999999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=4.5e-11  Score=65.37  Aligned_cols=42  Identities=21%  Similarity=0.394  Sum_probs=25.4

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECP  174 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  174 (227)
                      .|+++++|.|++|++.|.....|..|++.|.++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            345555666666666666666666666666666666666554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.3e-11  Score=66.27  Aligned_cols=42  Identities=24%  Similarity=0.506  Sum_probs=25.2

Q ss_pred             CCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        132 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       132 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.|.++++|.|++|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345555666666666666666666666666666666666554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4e-11  Score=65.25  Aligned_cols=41  Identities=24%  Similarity=0.611  Sum_probs=22.6

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            44445555555555555555555555555555555555554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=5.4e-11  Score=66.04  Aligned_cols=41  Identities=34%  Similarity=0.669  Sum_probs=27.8

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCC
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECP  174 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  174 (227)
                      +..+++|.|++|++.|.....|..|++.|.++++|.|++|+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            45556677777777777777777776666666667766665

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=65.28  Aligned_cols=41  Identities=39%  Similarity=0.742  Sum_probs=20.4

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            34444444555555555555555555555555555555544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.08  E-value=2.6e-11  Score=69.13  Aligned_cols=49  Identities=20%  Similarity=0.353  Sum_probs=26.3

Q ss_pred             ccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccccCC
Q psy16147        176 AFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       176 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      .|.....|..|++.|.++++|.|..|++.|.+.+.|..|++ .|++++||
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE-LRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH-HHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH-HhccCCCC
Confidence            34444445555555555555555555555555555555555 33445554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.6e-11  Score=66.69  Aligned_cols=41  Identities=34%  Similarity=0.592  Sum_probs=18.6

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            33344444444444444444444444444444444444444

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.6e-10  Score=63.48  Aligned_cols=44  Identities=32%  Similarity=0.580  Sum_probs=40.4

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678889999999999999999999999999999999999865

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.9e-11  Score=66.48  Aligned_cols=42  Identities=45%  Similarity=0.732  Sum_probs=22.8

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.3e-11  Score=65.56  Aligned_cols=41  Identities=34%  Similarity=0.713  Sum_probs=19.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=1.4e-10  Score=63.34  Aligned_cols=42  Identities=31%  Similarity=0.507  Sum_probs=40.1

Q ss_pred             hhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccccccc
Q psy16147        161 EHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL  202 (227)
Q Consensus       161 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  202 (227)
                      .|.++++|.|++|++.|.....|..|++.|.++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            577899999999999999999999999999999999999996

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.7e-11  Score=66.05  Aligned_cols=41  Identities=37%  Similarity=0.691  Sum_probs=19.3

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.07  E-value=2.1e-11  Score=69.51  Aligned_cols=52  Identities=17%  Similarity=0.276  Sum_probs=48.5

Q ss_pred             ccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcc
Q psy16147        146 DKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ  197 (227)
Q Consensus       146 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  197 (227)
                      ++.|.....|..|++.|.++++|.|++|++.|.....|..|++.|.+++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            5678888899999999999999999999999999999999999999999874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.8e-11  Score=64.91  Aligned_cols=41  Identities=20%  Similarity=0.511  Sum_probs=20.7

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            34444445555555555555555555555555555555544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.5e-11  Score=64.79  Aligned_cols=39  Identities=49%  Similarity=0.906  Sum_probs=19.7

Q ss_pred             hhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        160 YEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       160 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      +.|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            344444555555555555555555555555555555544

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=63.72  Aligned_cols=43  Identities=40%  Similarity=0.726  Sum_probs=40.6

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      ++.|.++++|.|++|++.|.....|..|++.|.+++||.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4578899999999999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=64.71  Aligned_cols=31  Identities=45%  Similarity=0.977  Sum_probs=11.2

Q ss_pred             CCCccCCCCCcccCCchhHHHHHhhccCCCC
Q psy16147        165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKP  195 (227)
Q Consensus       165 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  195 (227)
                      +++|.|+.|++.|.....|..|++.|.+++|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP   39 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC
T ss_pred             CCCeeCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            3333333333333333333333333333333

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=5.3e-11  Score=65.39  Aligned_cols=42  Identities=26%  Similarity=0.475  Sum_probs=23.3

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccC-CCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSG-EKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  199 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44445555555555555555555555555555555 5555554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.1e-10  Score=64.10  Aligned_cols=43  Identities=35%  Similarity=0.587  Sum_probs=40.5

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      ++.|.++++|.|++|++.|.....|..|++.|.+++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4568899999999999999999999999999999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=6.1e-11  Score=63.79  Aligned_cols=36  Identities=36%  Similarity=0.839  Sum_probs=14.3

Q ss_pred             hcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcc
Q psy16147        162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ  197 (227)
Q Consensus       162 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  197 (227)
                      |.++++|.|++|++.|.....|..|++.|.+++||.
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            333333444444444444444444443343333333

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=1.5e-10  Score=64.22  Aligned_cols=42  Identities=33%  Similarity=0.555  Sum_probs=39.7

Q ss_pred             hcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccc
Q psy16147        162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLK  203 (227)
Q Consensus       162 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  203 (227)
                      +.++++|.|++|++.|.....|..|++.|.+++||.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            567899999999999999999999999999999999999985

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5e-11  Score=65.49  Aligned_cols=41  Identities=37%  Similarity=0.763  Sum_probs=20.1

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            33444444445555555555555555555544544454444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.04  E-value=7.5e-11  Score=63.39  Aligned_cols=36  Identities=33%  Similarity=0.666  Sum_probs=14.5

Q ss_pred             hcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcc
Q psy16147        162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQ  197 (227)
Q Consensus       162 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  197 (227)
                      |.++++|.|++|++.|.....|..|++.|.+++||.
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            333334444444444444444444444444444433

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.8e-11  Score=64.20  Aligned_cols=33  Identities=39%  Similarity=0.855  Sum_probs=12.2

Q ss_pred             CCCCccCCCCCcccCCchhHHHHHhhccCCCCc
Q psy16147        164 GQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF  196 (227)
Q Consensus       164 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  196 (227)
                      ++++|.|+.|++.|.....|..|++.|.+++||
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            8 GEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             SSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            333333333333333333333333333333333

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.7e-11  Score=65.61  Aligned_cols=42  Identities=26%  Similarity=0.514  Sum_probs=23.5

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555553

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=63.32  Aligned_cols=38  Identities=34%  Similarity=0.622  Sum_probs=17.3

Q ss_pred             hhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        161 EHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       161 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      .|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=3.7e-10  Score=61.94  Aligned_cols=43  Identities=28%  Similarity=0.591  Sum_probs=39.4

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3467888999999999999999999999999999999999973

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.00  E-value=4.1e-10  Score=61.75  Aligned_cols=43  Identities=33%  Similarity=0.620  Sum_probs=39.3

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3467888999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.8e-10  Score=61.46  Aligned_cols=42  Identities=33%  Similarity=0.724  Sum_probs=38.9

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            467888999999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.00  E-value=4.6e-10  Score=60.20  Aligned_cols=41  Identities=27%  Similarity=0.592  Sum_probs=37.7

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            35678889999999999999999999999999999999984

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.6e-10  Score=61.18  Aligned_cols=43  Identities=33%  Similarity=0.663  Sum_probs=39.2

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3467888999999999999999999999999999999999973

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.4e-10  Score=61.63  Aligned_cols=43  Identities=30%  Similarity=0.658  Sum_probs=39.3

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3467888999999999999999999999999999999999973

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=5.2e-10  Score=61.31  Aligned_cols=43  Identities=30%  Similarity=0.679  Sum_probs=39.2

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      +.+.|+++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3467888999999999999999999999999999999999973

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.9e-10  Score=61.40  Aligned_cols=42  Identities=36%  Similarity=0.680  Sum_probs=38.9

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            467888999999999999999999999999999999999973

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=5.5e-10  Score=61.20  Aligned_cols=43  Identities=33%  Similarity=0.709  Sum_probs=39.2

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      +...|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3467888999999999999999999999999999999999973

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.7e-11  Score=64.32  Aligned_cols=37  Identities=22%  Similarity=0.488  Sum_probs=15.8

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCCCCccC
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC  170 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  170 (227)
                      |.++++|.|++|++.|.....|..|++.|+++++|.|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=62.69  Aligned_cols=24  Identities=42%  Similarity=0.779  Sum_probs=8.8

Q ss_pred             cCCCCcccccccccccCchhHHHh
Q psy16147        191 SGEKPFQCCKCLKRFSHSGSYSQH  214 (227)
Q Consensus       191 ~~~~~~~C~~C~~~f~~~~~l~~H  214 (227)
                      .++++|.|.+|++.|.+.+.|..|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H   31 (44)
T 2epv_A            8 SGEKPYECNECGKAFIWKSLLIVH   31 (44)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCcccCchHHHHHH
Confidence            333333333333333333333333

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.3e-10  Score=61.27  Aligned_cols=42  Identities=29%  Similarity=0.662  Sum_probs=38.9

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            467888999999999999999999999999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=63.64  Aligned_cols=41  Identities=32%  Similarity=0.623  Sum_probs=21.4

Q ss_pred             CCCCCCccccC--cCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        133 DNSGEGQFLCD--QCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       133 ~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      .|.++++|.|.  .|++.|.....|..|++.|.++++|.|..|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555554  455555555555555555555555555444

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.4e-10  Score=61.23  Aligned_cols=42  Identities=36%  Similarity=0.742  Sum_probs=38.8

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            467888999999999999999999999999999999999973

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.3e-10  Score=61.29  Aligned_cols=42  Identities=33%  Similarity=0.619  Sum_probs=38.8

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            467888999999999999999999999999999999999973

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=6.6e-10  Score=59.57  Aligned_cols=41  Identities=22%  Similarity=0.489  Sum_probs=37.6

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            35678889999999999999999999999999999999984

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.8e-10  Score=62.41  Aligned_cols=39  Identities=28%  Similarity=0.598  Sum_probs=20.7

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .|.++++|.|++|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555553

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.6e-10  Score=61.14  Aligned_cols=42  Identities=31%  Similarity=0.726  Sum_probs=38.9

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            467888999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.9e-10  Score=60.78  Aligned_cols=42  Identities=31%  Similarity=0.593  Sum_probs=38.8

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            467888999999999999999999999999999999999973

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.6e-10  Score=60.88  Aligned_cols=42  Identities=31%  Similarity=0.649  Sum_probs=38.9

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            467888999999999999999999999999999999999973

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.97  E-value=3.6e-10  Score=61.05  Aligned_cols=39  Identities=31%  Similarity=0.687  Sum_probs=21.3

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .|.++++|.|+.|++.|.....|..|++.|+++++|.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            344455555555555555555555555555555555554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.6e-10  Score=61.16  Aligned_cols=42  Identities=31%  Similarity=0.654  Sum_probs=38.8

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            467888999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.6e-10  Score=60.87  Aligned_cols=43  Identities=28%  Similarity=0.626  Sum_probs=39.2

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            3467888999999999999999999999999999999999963

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.2e-10  Score=60.74  Aligned_cols=42  Identities=31%  Similarity=0.602  Sum_probs=38.8

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            467888999999999999999999999999999999999973

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.4e-10  Score=61.20  Aligned_cols=42  Identities=29%  Similarity=0.645  Sum_probs=38.8

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            467788999999999999999999999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.1e-10  Score=60.76  Aligned_cols=41  Identities=37%  Similarity=0.743  Sum_probs=38.3

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|+++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            46788899999999999999999999999999999999996

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.8e-10  Score=60.58  Aligned_cols=41  Identities=29%  Similarity=0.579  Sum_probs=38.3

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            46788899999999999999999999999999999999996

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.4e-10  Score=60.67  Aligned_cols=42  Identities=31%  Similarity=0.698  Sum_probs=38.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            346788899999999999999999999999999999999996

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.2e-10  Score=60.70  Aligned_cols=41  Identities=29%  Similarity=0.691  Sum_probs=38.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            46788899999999999999999999999999999999996

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=7.4e-10  Score=60.00  Aligned_cols=41  Identities=27%  Similarity=0.577  Sum_probs=38.1

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            46788899999999999999999999999999999999984

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.6e-10  Score=60.88  Aligned_cols=43  Identities=21%  Similarity=0.407  Sum_probs=39.2

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVE  172 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  172 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3467888999999999999999999999999999999999973

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=7e-10  Score=59.46  Aligned_cols=40  Identities=35%  Similarity=0.666  Sum_probs=37.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC  170 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  170 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4678889999999999999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.95  E-value=7.7e-10  Score=59.29  Aligned_cols=40  Identities=35%  Similarity=0.622  Sum_probs=37.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC  170 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  170 (227)
                      ...|.++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4678889999999999999999999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=7.8e-10  Score=60.59  Aligned_cols=42  Identities=29%  Similarity=0.602  Sum_probs=38.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            346788899999999999999999999999999999999996

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.7e-10  Score=59.84  Aligned_cols=41  Identities=24%  Similarity=0.549  Sum_probs=37.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC  170 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  170 (227)
                      +...|.++++|.|+.|++.|.....|..|++.|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            34678889999999999999999999999999999999987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.1e-10  Score=60.36  Aligned_cols=42  Identities=31%  Similarity=0.597  Sum_probs=38.5

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            346788899999999999999999999999999999999984

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.7e-10  Score=59.94  Aligned_cols=41  Identities=24%  Similarity=0.522  Sum_probs=38.0

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            46678899999999999999999999999999999999984

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=9.4e-10  Score=59.62  Aligned_cols=42  Identities=14%  Similarity=0.362  Sum_probs=38.5

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            346788899999999999999999999999999999999984

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.3e-10  Score=62.46  Aligned_cols=39  Identities=26%  Similarity=0.584  Sum_probs=23.2

Q ss_pred             CCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        133 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       133 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            445555666666666666666666666666666666554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.94  E-value=1.2e-09  Score=58.98  Aligned_cols=41  Identities=22%  Similarity=0.346  Sum_probs=38.1

Q ss_pred             hhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccccc
Q psy16147        160 YEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK  200 (227)
Q Consensus       160 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  200 (227)
                      +.|.++++|.|+.|++.|.....|..|++.|.+++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            45788999999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=9.1e-10  Score=59.67  Aligned_cols=41  Identities=27%  Similarity=0.596  Sum_probs=38.0

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|+++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            46788899999999999999999999999999999999984

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=9.1e-10  Score=59.03  Aligned_cols=40  Identities=25%  Similarity=0.529  Sum_probs=37.2

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC  170 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  170 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            4667889999999999999999999999999999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=9e-10  Score=60.02  Aligned_cols=42  Identities=36%  Similarity=0.755  Sum_probs=38.8

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK  200 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  200 (227)
                      .+.|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456889999999999999999999999999999999999963

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=6.6e-10  Score=59.25  Aligned_cols=35  Identities=34%  Similarity=0.700  Sum_probs=15.0

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCcc
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYK  169 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  169 (227)
                      .++++|.|++|++.|.....|..|++.|+++++|.
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            6 SGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            33444444444444444444444444444444443

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1e-09  Score=60.10  Aligned_cols=42  Identities=33%  Similarity=0.661  Sum_probs=38.8

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            346788899999999999999999999999999999999996

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.4e-09  Score=59.53  Aligned_cols=42  Identities=31%  Similarity=0.630  Sum_probs=39.0

Q ss_pred             HhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccccc
Q psy16147        159 KYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCK  200 (227)
Q Consensus       159 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  200 (227)
                      ++.|.++++|.|++|++.|.....|..|++.|.+++||.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            456889999999999999999999999999999999999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.2e-09  Score=59.14  Aligned_cols=41  Identities=22%  Similarity=0.411  Sum_probs=37.7

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      ...|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            35678889999999999999999999999999999999984

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.1e-09  Score=60.05  Aligned_cols=42  Identities=21%  Similarity=0.418  Sum_probs=38.6

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcC-CCCccCCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSG-QRPYKCVE  172 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  172 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.+ +++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678889999999999999999999999999999 99999963

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-09  Score=60.33  Aligned_cols=44  Identities=30%  Similarity=0.589  Sum_probs=40.9

Q ss_pred             HHhhhcCCCCccCC--CCCcccCCchhHHHHHhhccCCCCcccccc
Q psy16147        158 HKYEHSGQRPYKCV--ECPKAFKHKHHLTEHKRLHSGEKPFQCCKC  201 (227)
Q Consensus       158 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  201 (227)
                      |.+.|.++++|.|.  .|++.|.....|..|++.|.+++||.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899999998  899999999999999999999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.92  E-value=2.8e-10  Score=66.76  Aligned_cols=51  Identities=14%  Similarity=0.363  Sum_probs=44.6

Q ss_pred             ccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhH
Q psy16147        130 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHL  183 (227)
Q Consensus       130 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  183 (227)
                      +.+.|.++++|.|+.||+.|.....|.   +.|.++++|.|+.|++.|.....+
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            346788999999999999999988886   789999999999999999876654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-09  Score=59.97  Aligned_cols=41  Identities=34%  Similarity=0.548  Sum_probs=38.4

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            46788899999999999999999999999999999999996

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.7e-09  Score=57.63  Aligned_cols=39  Identities=46%  Similarity=0.815  Sum_probs=36.7

Q ss_pred             hhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        160 YEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       160 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      +.|.++++|.|+.|++.|.....|..|++.|.+++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            357889999999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.4e-09  Score=58.93  Aligned_cols=43  Identities=28%  Similarity=0.539  Sum_probs=40.2

Q ss_pred             hHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        157 RHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       157 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      .|++.|.++++|.|++|++.|.....|..|++.|.+++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999883

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-09  Score=59.89  Aligned_cols=41  Identities=27%  Similarity=0.474  Sum_probs=38.2

Q ss_pred             cCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        131 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       131 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      .+.|.++++|.|++|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            46788899999999999999999999999999999999986

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.1e-10  Score=71.34  Aligned_cols=59  Identities=19%  Similarity=0.285  Sum_probs=29.0

Q ss_pred             HHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhh
Q psy16147        155 LARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       155 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      |..|+..+.+.+++.|..|+..|. ...|..|+ .|.+++++.|+.|++.|. +..|..|++
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~   63 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPE   63 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHH
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHH
Confidence            334444444455555555555552 44455555 445555555555555444 245555554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.86  E-value=1.8e-09  Score=56.04  Aligned_cols=35  Identities=29%  Similarity=0.657  Sum_probs=32.3

Q ss_pred             cCCCCCCCCcccCCcchhhhcChhHHHHHHHhccc
Q psy16147         32 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        32 ~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      |...|+++++|.|++|++.|....+|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            56788999999999999999999999999999865

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3.3e-09  Score=57.40  Aligned_cols=41  Identities=39%  Similarity=0.634  Sum_probs=21.1

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccc
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQC  198 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  198 (227)
                      |++.|.++++|.|++|++.|.....|..|++.|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            34444555555555555555555555555555555555543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.3e-09  Score=55.98  Aligned_cols=33  Identities=24%  Similarity=0.330  Sum_probs=30.0

Q ss_pred             CCCCCCcccCCc--chhhhcChhHHHHHHHhcccc
Q psy16147         35 DNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        35 ~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .+++++||.|.+  |++.|....+|..|+++|.++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467899999987  999999999999999999764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=1.6e-10  Score=72.77  Aligned_cols=42  Identities=14%  Similarity=0.304  Sum_probs=23.9

Q ss_pred             CCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCC
Q psy16147        132 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVEC  173 (227)
Q Consensus       132 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  173 (227)
                      ..|+++++|.|++|++.|.....|..|++.|.++++|.|..|
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~   59 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ   59 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh
Confidence            345555556666666666666566666555555555555443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=7.8e-10  Score=69.55  Aligned_cols=64  Identities=13%  Similarity=0.190  Sum_probs=52.8

Q ss_pred             HHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhcccccccCC
Q psy16147        158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       158 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      +.+.|.++++|.|++|++.|.....|..|++.|.+++||.|..|    ..+..|..|.+.+....-++
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~~~~~~   79 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADGAFADF   79 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCCSSSCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhcccccccccc
Confidence            34568899999999999999999999999999999999999765    46677888888665544333

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.77  E-value=4.3e-09  Score=53.83  Aligned_cols=33  Identities=30%  Similarity=0.553  Sum_probs=30.1

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .|+++++|.|++|++.|....+|..|+++|.++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            367899999999999999999999999999754

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4.6e-09  Score=54.45  Aligned_cols=34  Identities=18%  Similarity=0.382  Sum_probs=31.0

Q ss_pred             CCCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         34 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ..|+++++|.|++|++.|....+|..|+++|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.75  E-value=5.3e-09  Score=53.42  Aligned_cols=32  Identities=28%  Similarity=0.439  Sum_probs=29.7

Q ss_pred             CCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         36 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      |+++++|.|.+|++.|....+|..|+++|.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=6.5e-09  Score=63.29  Aligned_cols=63  Identities=19%  Similarity=0.367  Sum_probs=54.9

Q ss_pred             cccCCCCCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCC
Q psy16147        129 SCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK  194 (227)
Q Consensus       129 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  194 (227)
                      .|...+.+.+++.|+.|++.|. ..+|..|+ .+.+++++.|+.|++.|. ...|..|++.|.++.
T Consensus         7 ~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            7 GHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            3445678889999999999995 89999999 899999999999999887 488899999988764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.72  E-value=7.8e-09  Score=54.30  Aligned_cols=29  Identities=24%  Similarity=0.659  Sum_probs=10.8

Q ss_pred             CccCCCCCcccCCchhHHHHHhhccCCCC
Q psy16147        167 PYKCVECPKAFKHKHHLTEHKRLHSGEKP  195 (227)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  195 (227)
                      +|.|+.|++.|.....|..|++.|.++++
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             ceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            33333333333333333333333333333

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=7.1e-09  Score=53.32  Aligned_cols=34  Identities=24%  Similarity=0.344  Sum_probs=30.7

Q ss_pred             CCCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         34 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ..|+++++|.|.+|++.|....+|..|+++|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3578899999999999999999999999998653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=7.9e-09  Score=53.18  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=30.5

Q ss_pred             CCCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         34 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ..|+++++|.|.+|++.|....+|..|+++|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            3578899999999999999999999999998653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1e-08  Score=52.71  Aligned_cols=34  Identities=26%  Similarity=0.417  Sum_probs=30.6

Q ss_pred             CCCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         34 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ..|+++++|.|.+|++.|....+|..|+++|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3578899999999999999999999999998653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=1.1e-08  Score=59.94  Aligned_cols=39  Identities=33%  Similarity=0.604  Sum_probs=32.5

Q ss_pred             hcCCCCccCCC--CCcccCCchhHHHHH-hhccCCCCccccc
Q psy16147        162 HSGQRPYKCVE--CPKAFKHKHHLTEHK-RLHSGEKPFQCCK  200 (227)
Q Consensus       162 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  200 (227)
                      ..+++||.|..  |++.|.....|..|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            56788999965  999999999999997 5799999988865

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.5e-08  Score=52.07  Aligned_cols=33  Identities=33%  Similarity=0.570  Sum_probs=30.2

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .|+++++|.|.+|++.|....+|..|+++|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            578899999999999999999999999999654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.67  E-value=1.6e-08  Score=53.07  Aligned_cols=36  Identities=19%  Similarity=0.336  Sum_probs=33.3

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccC
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKC  170 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  170 (227)
                      .++++|.|++|++.|.....|..|++.|.++++|.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            467899999999999999999999999999999876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.67  E-value=1.1e-08  Score=53.01  Aligned_cols=32  Identities=38%  Similarity=0.645  Sum_probs=16.7

Q ss_pred             HHhhccCCCCcccccccccccCchhHHHhhhc
Q psy16147        186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNH  217 (227)
Q Consensus       186 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  217 (227)
                      |++.|.+++||.|+.|++.|.+.+.|..|++.
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH
Confidence            34445555555555555555555555555543

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=7.8e-09  Score=53.55  Aligned_cols=36  Identities=19%  Similarity=0.293  Sum_probs=23.4

Q ss_pred             hhccCCCCcccccccccccCchhHHHhhhcccccccC
Q psy16147        188 RLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKP  224 (227)
Q Consensus       188 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  224 (227)
                      +.|.++++|.|..|++.|.+.+.|..|++. |++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKT-NHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHH-HCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHH-HcCCCC
Confidence            346667777777777777777777777764 344443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.2e-08  Score=52.90  Aligned_cols=32  Identities=28%  Similarity=0.460  Sum_probs=29.5

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHH-HHhccc
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARH-KYEHSV   66 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~   66 (227)
                      .|+++++|.|++|++.|....+|..| +++|.+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            57899999999999999999999999 888864

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.8e-08  Score=51.76  Aligned_cols=33  Identities=33%  Similarity=0.498  Sum_probs=29.9

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .++++++|.|++|++.|....+|..|+++|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            467889999999999999999999999998653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.6e-08  Score=52.29  Aligned_cols=33  Identities=33%  Similarity=0.571  Sum_probs=30.1

Q ss_pred             CCCCCCcccCCcchhhhcCh-hHHHHHHHhcccc
Q psy16147         35 DNSGEGQFLCDQCDKVFAKH-SSLARHKYEHSVL   67 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~~   67 (227)
                      .|+++++|.|++|++.|... .+|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            57889999999999999999 9999999998653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.59  E-value=2.7e-08  Score=50.73  Aligned_cols=34  Identities=26%  Similarity=0.603  Sum_probs=21.7

Q ss_pred             ccCCCCcccccccccccCchhHHHhhhcccccccC
Q psy16147        190 HSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKP  224 (227)
Q Consensus       190 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  224 (227)
                      |.++++|.|..|++.|.+.+.|..|++. |++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            5566677777777777777777777664 344443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.59  E-value=1.9e-08  Score=55.52  Aligned_cols=34  Identities=21%  Similarity=0.471  Sum_probs=29.5

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHH-hccccc
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKY-EHSVLQ   68 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~   68 (227)
                      .|+++++|.|.+|++.|....+|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            3788999999999999999999999999 897654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=5.8e-08  Score=56.89  Aligned_cols=41  Identities=22%  Similarity=0.279  Sum_probs=36.6

Q ss_pred             CCCCCCCccccCc--CccccCChhHHHhHH-hhhcCCCCccCCC
Q psy16147        132 DDNSGEGQFLCDQ--CDKVFAKHSSLARHK-YEHSGQRPYKCVE  172 (227)
Q Consensus       132 ~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  172 (227)
                      ....+++||.|+.  |+++|...+.|..|+ ++|++++||.|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4567889999975  999999999999997 6899999999975

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.55  E-value=7.1e-08  Score=49.03  Aligned_cols=32  Identities=31%  Similarity=0.536  Sum_probs=18.2

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCC
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQR  166 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  166 (227)
                      .++++|.|++|++.|.....|..|++.|++++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            34455566666666666666666655555543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.55  E-value=6.2e-08  Score=48.74  Aligned_cols=30  Identities=27%  Similarity=0.489  Sum_probs=17.3

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPY  168 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  168 (227)
                      +|.|++|++.|.....|..|++.|+++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555666665555555555555555554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.51  E-value=4e-08  Score=50.86  Aligned_cols=33  Identities=33%  Similarity=0.499  Sum_probs=29.5

Q ss_pred             CCCCCCcccCCc--chhhhcChhHHHHHHHhcccc
Q psy16147         35 DNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        35 ~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .++++++|.|.+  ||+.|....+|..|+++|.++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467899999995  999999999999999999754

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.51  E-value=7.7e-08  Score=48.36  Aligned_cols=31  Identities=32%  Similarity=0.523  Sum_probs=17.5

Q ss_pred             CcccccccccccCchhHHHhhhcccccccCCC
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR  226 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  226 (227)
                      ||.|+.|++.|.+.+.|..|++ .|++++||+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHIT-LHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH-HHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHH-HhCCCCCCC
Confidence            4556666666666666666655 345555553

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.48  E-value=5.6e-08  Score=46.32  Aligned_cols=27  Identities=26%  Similarity=0.528  Sum_probs=24.9

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      +++|.|.+||+.|....+|..|+++|.
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999873

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=6.6e-08  Score=50.24  Aligned_cols=33  Identities=33%  Similarity=0.614  Sum_probs=29.6

Q ss_pred             CCCCCcccCC--cchhhhcChhHHHHHHHhccccc
Q psy16147         36 NSGEGQFLCD--QCDKVFAKHSSLARHKYEHSVLQ   68 (227)
Q Consensus        36 ~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~   68 (227)
                      |+++++|.|.  .|++.|....+|..|+++|.++.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            5688999999  59999999999999999997654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=4.5e-08  Score=46.73  Aligned_cols=26  Identities=19%  Similarity=0.397  Sum_probs=24.4

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEH   64 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h   64 (227)
                      +++|.|.+||+.|....+|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            47899999999999999999999987

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=6.5e-08  Score=50.26  Aligned_cols=35  Identities=26%  Similarity=0.579  Sum_probs=22.4

Q ss_pred             ccCCCCcccc--cccccccCchhHHHhhhcccccccCC
Q psy16147        190 HSGEKPFQCC--KCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       190 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      |.++++|.|.  .|++.|.+.+.|..|++ .|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKH-KHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHH-HHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHH-HhCCCCCC
Confidence            4556667776  37777777777777766 34556665

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.45  E-value=6.2e-08  Score=46.56  Aligned_cols=27  Identities=22%  Similarity=0.495  Sum_probs=25.0

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      +++|.|.+|++.|....+|..|+++|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999999885

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.45  E-value=8.1e-08  Score=46.80  Aligned_cols=29  Identities=28%  Similarity=0.515  Sum_probs=26.3

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +++|.|.+|++.|....+|..|+++|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47899999999999999999999998653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=1.3e-07  Score=55.64  Aligned_cols=35  Identities=29%  Similarity=0.548  Sum_probs=31.3

Q ss_pred             CCCCCCCcccCCcchhhhcChhHHHHHHHhccccc
Q psy16147         34 DDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQ   68 (227)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   68 (227)
                      ..+.++++|.|.+|++.|....+|..|+++|.+..
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            34778999999999999999999999999997643

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=8.7e-08  Score=49.83  Aligned_cols=29  Identities=14%  Similarity=0.188  Sum_probs=17.7

Q ss_pred             ccCCCCccccc--ccccccCchhHHHhhhcc
Q psy16147        190 HSGEKPFQCCK--CLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       190 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  218 (227)
                      +.+++||+|+.  |+++|.+.+.|..|+++|
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~H   34 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVH   34 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            44566666654  666666666666666643

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.44  E-value=8.3e-08  Score=52.85  Aligned_cols=27  Identities=30%  Similarity=0.624  Sum_probs=14.0

Q ss_pred             ccCCCCcccccccccccCchhHHHhhh
Q psy16147        190 HSGEKPFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       190 h~~~~~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      |.++++|.|.+|++.|.+...|..|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            444555555555555555555555554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=4.7e-08  Score=50.56  Aligned_cols=29  Identities=14%  Similarity=0.308  Sum_probs=20.9

Q ss_pred             hhccCCCCcccccccccccCchhHHHh-hh
Q psy16147        188 RLHSGEKPFQCCKCLKRFSHSGSYSQH-MN  216 (227)
Q Consensus       188 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~  216 (227)
                      +.|.+++||+|..|++.|.+.+.|..| ++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   31 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQ   31 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHH
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHH
Confidence            356677777777777777777777777 54

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.43  E-value=8.6e-08  Score=49.14  Aligned_cols=28  Identities=25%  Similarity=0.501  Sum_probs=25.8

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHH
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKY   62 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~   62 (227)
                      .+.+++||.|.+||+.|...++|..|+.
T Consensus         2 ~~~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            2 SLLKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CSSSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCCCccCeECCCCCCccCCHhHccCcCC
Confidence            3578999999999999999999999984

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.41  E-value=1e-07  Score=46.11  Aligned_cols=28  Identities=29%  Similarity=0.504  Sum_probs=25.5

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ++|.|++||+.|....+|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5799999999999999999999998653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2.6e-07  Score=47.27  Aligned_cols=32  Identities=22%  Similarity=0.434  Sum_probs=19.3

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +.++++|.|++|++.|.....|..|++.|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            34455666666666666666666666666543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=2.9e-07  Score=46.99  Aligned_cols=32  Identities=28%  Similarity=0.504  Sum_probs=21.7

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      |.++++|.|++|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            45566677777777777777777777766654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.39  E-value=5.8e-08  Score=53.22  Aligned_cols=39  Identities=18%  Similarity=0.284  Sum_probs=32.7

Q ss_pred             ccccCCCCCCCCcccCC--cchhhhcChhHHHHHHHhcccc
Q psy16147         29 TMSCADDNSGEGQFLCD--QCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        29 ~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .+.+...|+++++|.|+  .||+.|....+|..|+++|.++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            33445568899999996  7999999999999999999754

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=3.1e-07  Score=46.94  Aligned_cols=32  Identities=28%  Similarity=0.468  Sum_probs=19.5

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +.++++|.|++|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            44556666666666666666666666666543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.6e-07  Score=47.54  Aligned_cols=32  Identities=38%  Similarity=0.652  Sum_probs=19.4

Q ss_pred             CCCCCccccCcCccccCCh-hHHHhHHhhhcCC
Q psy16147        134 NSGEGQFLCDQCDKVFAKH-SSLARHKYEHSGQ  165 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  165 (227)
                      |.++++|.|+.|++.|... ..|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            4455566666666666666 6666666666543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.38  E-value=1.6e-07  Score=45.39  Aligned_cols=28  Identities=32%  Similarity=0.731  Sum_probs=25.4

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ++|.|++|++.|....+|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999998653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=3.7e-07  Score=46.60  Aligned_cols=32  Identities=34%  Similarity=0.638  Sum_probs=20.5

Q ss_pred             CCCCCccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        134 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       134 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +.++++|.|++|++.|.....|..|++.|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            34556666666666666666666666666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.35  E-value=9.9e-08  Score=48.90  Aligned_cols=25  Identities=24%  Similarity=0.416  Sum_probs=12.7

Q ss_pred             cCCCCcccccccccccCchhHHHhh
Q psy16147        191 SGEKPFQCCKCLKRFSHSGSYSQHM  215 (227)
Q Consensus       191 ~~~~~~~C~~C~~~f~~~~~l~~H~  215 (227)
                      .+++||.|+.|+++|.+.++|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3445555555555555555555554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=1.5e-07  Score=45.37  Aligned_cols=28  Identities=36%  Similarity=0.609  Sum_probs=25.5

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ++|.|++|++.|....+|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            5799999999999999999999998653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.33  E-value=5.2e-08  Score=48.62  Aligned_cols=31  Identities=29%  Similarity=0.489  Sum_probs=24.1

Q ss_pred             CCcccccccccccCchhHHHhhhcccccccCC
Q psy16147        194 KPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPY  225 (227)
Q Consensus       194 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  225 (227)
                      +||.|..|++.|.+.+.|..|++ .|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIK-TAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTT-SSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHH-HHccCCCC
Confidence            46788888888888888888887 45777776

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.68  E-value=6.3e-08  Score=46.96  Aligned_cols=28  Identities=32%  Similarity=0.473  Sum_probs=25.3

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ++|.|.+|++.|....+|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4799999999999999999999998653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=2.9e-07  Score=45.65  Aligned_cols=29  Identities=38%  Similarity=0.780  Sum_probs=26.2

Q ss_pred             CCcccCC--cchhhhcChhHHHHHHHhcccc
Q psy16147         39 EGQFLCD--QCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        39 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +++|.|.  .||+.|....+|..|+++|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4789999  8999999999999999999653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=6.4e-08  Score=45.65  Aligned_cols=25  Identities=36%  Similarity=0.801  Sum_probs=23.5

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEH   64 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h   64 (227)
                      ++|.|++||+.|....+|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5799999999999999999999987

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=6.6e-08  Score=47.20  Aligned_cols=29  Identities=28%  Similarity=0.531  Sum_probs=26.0

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +++|.|.+||+.|....+|..|+++|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            46899999999999999999999998653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.32  E-value=2.6e-07  Score=44.91  Aligned_cols=28  Identities=21%  Similarity=0.328  Sum_probs=25.5

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ++|.|.+|++.|....+|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            4799999999999999999999998754

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=1.9e-07  Score=44.98  Aligned_cols=28  Identities=29%  Similarity=0.453  Sum_probs=25.5

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ++|.|.+|++.|....+|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5799999999999999999999998653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=5.2e-07  Score=46.06  Aligned_cols=31  Identities=35%  Similarity=0.596  Sum_probs=20.5

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      .++++|.|+.|++.|.....|..|++.|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            4456677777777777777777776666654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.31  E-value=2e-07  Score=44.21  Aligned_cols=26  Identities=31%  Similarity=0.751  Sum_probs=23.5

Q ss_pred             cccCCcchhhhcChhHHHHHHHhccc
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      +|.|.+|++.|....+|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            58999999999999999999999864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.28  E-value=3.4e-07  Score=45.02  Aligned_cols=28  Identities=36%  Similarity=0.705  Sum_probs=25.4

Q ss_pred             CcccCC--cchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCD--QCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ++|.|+  .||+.|....+|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            579998  9999999999999999999754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.25  E-value=7.6e-08  Score=47.99  Aligned_cols=30  Identities=23%  Similarity=0.410  Sum_probs=18.7

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPY  168 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  168 (227)
                      +|.|++|++.|.....|..|++.|+++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            456666666666666666666666665554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.21  E-value=9.1e-07  Score=42.55  Aligned_cols=27  Identities=30%  Similarity=0.648  Sum_probs=16.6

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +|.|+.|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            456666666666666666666666543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.21  E-value=2.4e-07  Score=50.63  Aligned_cols=27  Identities=26%  Similarity=0.582  Sum_probs=13.1

Q ss_pred             ccCCCCcccc--cccccccCchhHHHhhh
Q psy16147        190 HSGEKPFQCC--KCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       190 h~~~~~~~C~--~C~~~f~~~~~l~~H~~  216 (227)
                      |.+++||.|.  .|++.|.+.+.|..|++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~   41 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHH
Confidence            4444455553  35555555555555544

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=4.6e-07  Score=43.03  Aligned_cols=26  Identities=23%  Similarity=0.483  Sum_probs=19.5

Q ss_pred             CCCcccccccccccCchhHHHhhhcc
Q psy16147        193 EKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       193 ~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      ++||.|+.|++.|.+.+.|..|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35778888888888888888887654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.20  E-value=5.6e-07  Score=42.63  Aligned_cols=26  Identities=31%  Similarity=0.703  Sum_probs=18.4

Q ss_pred             CCCcccccccccccCchhHHHhhhcc
Q psy16147        193 EKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       193 ~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      ++||.|..|++.|.+.+.|..|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35677777777777777777777643

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.19  E-value=1.3e-06  Score=41.91  Aligned_cols=27  Identities=33%  Similarity=0.858  Sum_probs=16.9

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +|.|+.|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            456666666666666666666666543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=7e-07  Score=42.65  Aligned_cols=26  Identities=31%  Similarity=0.634  Sum_probs=18.1

Q ss_pred             CCCcccccccccccCchhHHHhhhcc
Q psy16147        193 EKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       193 ~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +++|.|+.|++.|.+.+.|..|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhc
Confidence            35677777777777777777777644

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.18  E-value=5.5e-07  Score=43.75  Aligned_cols=28  Identities=29%  Similarity=0.606  Sum_probs=24.6

Q ss_pred             CcccCCcchhhhcChhHHHHH-HHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARH-KYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H-~~~h~~~   67 (227)
                      ++|.|+.||+.|....+|..| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            479999999999999999999 6788653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.18  E-value=1.3e-06  Score=44.90  Aligned_cols=32  Identities=34%  Similarity=0.615  Sum_probs=20.1

Q ss_pred             CCCCCccccCc--CccccCChhHHHhHHhhhcCC
Q psy16147        134 NSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       134 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      ++++++|.|.+  |++.|.....|..|++.|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34556666663  666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=1.3e-06  Score=42.30  Aligned_cols=28  Identities=29%  Similarity=0.602  Sum_probs=16.5

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      ++|.|+.|++.|.....|..|++.|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3456666666666666666666655543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.15  E-value=1.1e-06  Score=51.64  Aligned_cols=40  Identities=20%  Similarity=0.233  Sum_probs=30.9

Q ss_pred             hcCCCCccCCCCCcccCCchhHHHHHhhccCCCCccccccc
Q psy16147        162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCL  202 (227)
Q Consensus       162 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  202 (227)
                      +.++++|.|.+|++.|.....|..|+++|.++. ..+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            456788999999999999999999999888764 3444444

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=1.2e-06  Score=41.97  Aligned_cols=27  Identities=37%  Similarity=0.727  Sum_probs=17.9

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +|.|+.|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            466666777776666666666666554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.13  E-value=2e-06  Score=41.56  Aligned_cols=27  Identities=22%  Similarity=0.415  Sum_probs=15.7

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +|.|+.|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            355666666666666666665555544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=1.7e-06  Score=41.41  Aligned_cols=27  Identities=30%  Similarity=0.549  Sum_probs=15.1

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +|.|+.|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.10  E-value=2e-06  Score=41.63  Aligned_cols=27  Identities=19%  Similarity=0.372  Sum_probs=16.7

Q ss_pred             CcccccccccccCchhHHHhhhccccc
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNHRYSY  221 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  221 (227)
                      ||.|..|++.|.+.+.|..|+...|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            566777777777777777773223443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.09  E-value=2.5e-06  Score=41.74  Aligned_cols=27  Identities=41%  Similarity=0.920  Sum_probs=16.6

Q ss_pred             ccccC--cCccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCD--QCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +|.|+  .||+.|.....|..|++.|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45565  6666666666666666666554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=3.6e-06  Score=41.45  Aligned_cols=27  Identities=41%  Similarity=0.844  Sum_probs=15.4

Q ss_pred             CccccC--cCccccCChhHHHhHHhhhcC
Q psy16147        138 GQFLCD--QCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       138 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      ++|.|+  .|++.|.....|..|++.|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            345555  566666655556666555554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.05  E-value=2.9e-06  Score=39.93  Aligned_cols=25  Identities=32%  Similarity=0.816  Sum_probs=15.2

Q ss_pred             cccCcCccccCChhHHHhHHhhhcC
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      |.|+.|++.|.....|..|++.|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5566666666666666666665543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.05  E-value=1.5e-06  Score=41.73  Aligned_cols=26  Identities=31%  Similarity=0.715  Sum_probs=24.1

Q ss_pred             CcccCC--cchhhhcChhHHHHHHHhcc
Q psy16147         40 GQFLCD--QCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        40 ~~~~C~--~C~~~f~~~~~L~~H~~~h~   65 (227)
                      ++|.|.  .|++.|....+|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            479999  99999999999999999985

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=6.3e-07  Score=42.03  Aligned_cols=25  Identities=40%  Similarity=0.903  Sum_probs=18.7

Q ss_pred             CCcccccccccccCchhHHHhhhcc
Q psy16147        194 KPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       194 ~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +||.|+.|++.|.+.+.|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4677888888888888888887753

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=6.4e-07  Score=43.20  Aligned_cols=26  Identities=38%  Similarity=0.686  Sum_probs=15.6

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      +|.|+.|++.|.....|..|++.|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45566666666666666666655554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.20  E-value=1e-06  Score=42.67  Aligned_cols=26  Identities=35%  Similarity=0.793  Sum_probs=15.3

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      +|.|+.|++.|.....|..|++.|++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            45566666666666666666555544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.75  E-value=3.3e-05  Score=44.97  Aligned_cols=49  Identities=24%  Similarity=0.410  Sum_probs=31.4

Q ss_pred             CCCCcccCCchhHHHHHh-hccCCC------Ccccc--cccccccCchhHHHhhhccc
Q psy16147        171 VECPKAFKHKHHLTEHKR-LHSGEK------PFQCC--KCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       171 ~~C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  219 (227)
                      ..|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            346666666666666653 455443      57775  57777777777777777554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.70  E-value=2.1e-05  Score=37.38  Aligned_cols=25  Identities=32%  Similarity=0.791  Sum_probs=17.1

Q ss_pred             ccccC--cCccccCChhHHHhHHhhhc
Q psy16147        139 QFLCD--QCDKVFAKHSSLARHKYEHS  163 (227)
Q Consensus       139 ~~~C~--~C~~~f~~~~~l~~H~~~h~  163 (227)
                      +|.|+  .|++.|.....|..|++.|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            46676  77777777777777766664

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.25  E-value=0.00039  Score=40.35  Aligned_cols=47  Identities=21%  Similarity=0.396  Sum_probs=41.0

Q ss_pred             CcCccccCChhHHHhHH-hhhcCCC------CccCC--CCCcccCCchhHHHHHhh
Q psy16147        143 DQCDKVFAKHSSLARHK-YEHSGQR------PYKCV--ECPKAFKHKHHLTEHKRL  189 (227)
Q Consensus       143 ~~C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~  189 (227)
                      ..|++.|.+...|..|+ ..|.+.+      .|.|.  .|++.+.....|..|++.
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            56999999999999998 5787655      79996  899999999999999886

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.25  E-value=4.7e-05  Score=50.05  Aligned_cols=33  Identities=24%  Similarity=0.430  Sum_probs=30.1

Q ss_pred             ccCCCCCCCCcccCCcchhhhcChhHHHHHHHh
Q psy16147         31 SCADDNSGEGQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        31 ~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      ..-.+++|+++|.|..|++.|.+..+|..|+++
T Consensus        40 ~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           40 EFDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            346788999999999999999999999999886

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.08  E-value=0.00013  Score=47.97  Aligned_cols=29  Identities=21%  Similarity=0.474  Sum_probs=21.4

Q ss_pred             ccCCCCcccccccccccCchhHHHhhhcc
Q psy16147        190 HSGEKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       190 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      |+|+++|.|..|++.|.+.+.|..|++++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            66677777777777777777777777654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.73  E-value=0.00031  Score=46.86  Aligned_cols=77  Identities=21%  Similarity=0.330  Sum_probs=51.8

Q ss_pred             CccccCcCccccCChhHHHhHH--hhhcCC-CCccCCCC------CcccCCchhHHHHHhhccCCCCcccccccccccCc
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHK--YEHSGQ-RPYKCVEC------PKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHS  208 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  208 (227)
                      +++.|.+|...|.+...+..|.  +.|... +.+.+..+      +..+....    +...+.+...|.|.+|...|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            4688999999999999999998  455421 22332111      11121111    12234556779999999999999


Q ss_pred             hhHHHhhhcc
Q psy16147        209 GSYSQHMNHR  218 (227)
Q Consensus       209 ~~l~~H~~~~  218 (227)
                      ..|..|+...
T Consensus       107 ~~~~~H~~gk  116 (127)
T 1zu1_A          107 VVAESHYIGK  116 (127)
T ss_dssp             HHHHHHHTSH
T ss_pred             HHHHHHHCCH
Confidence            9999999744

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.04  E-value=0.017  Score=38.41  Aligned_cols=26  Identities=23%  Similarity=0.432  Sum_probs=22.7

Q ss_pred             CcccCCcchhhhcChhHHHHHH--Hhcc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHK--YEHS   65 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~--~~h~   65 (227)
                      +++.|.+|+..|.+...+..|.  +.|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~   58 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHA   58 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHH
Confidence            5689999999999999999998  4553

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.89  E-value=0.0066  Score=32.03  Aligned_cols=25  Identities=24%  Similarity=0.533  Sum_probs=23.2

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEH   64 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h   64 (227)
                      .+|.|+.|+..|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            7799999999999999999999954

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.47  E-value=0.0067  Score=29.94  Aligned_cols=28  Identities=18%  Similarity=0.370  Sum_probs=22.6

Q ss_pred             CcccccccccccCchhHHHhhhcccccc
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNHRYSYC  222 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  222 (227)
                      .|.|++|.+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4788888888888888888888777654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.29  E-value=0.018  Score=30.35  Aligned_cols=24  Identities=25%  Similarity=0.573  Sum_probs=19.6

Q ss_pred             CccccCcCccccCChhHHHhHHhh
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYE  161 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~  161 (227)
                      ..+.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            567888888888888888888873

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.52  E-value=0.066  Score=26.34  Aligned_cols=24  Identities=29%  Similarity=0.555  Sum_probs=18.3

Q ss_pred             cccCcCccccCChhHHHhHHhhhc
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHS  163 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~  163 (227)
                      |.||+|.+.|.+...|..|....+
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            778888888888888888865433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.22  E-value=0.12  Score=36.05  Aligned_cols=80  Identities=18%  Similarity=0.375  Sum_probs=54.9

Q ss_pred             ccc--CcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhc
Q psy16147        140 FLC--DQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNH  217 (227)
Q Consensus       140 ~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  217 (227)
                      ..|  .-|+.... ..++..|.. .-.-.+..|+.|+..+ ....|..|....-..+...|+.|+..+.. ..|..|...
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~  158 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQN  158 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTT
T ss_pred             cCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHh
Confidence            345  35666544 456777863 3344677899999887 56678889877777788889999888754 678999984


Q ss_pred             ccccccC
Q psy16147        218 RYSYCKP  224 (227)
Q Consensus       218 ~h~~~~~  224 (227)
                      + +++.+
T Consensus       159 ~-~~~~~  164 (170)
T 3hcs_A          159 C-PLALE  164 (170)
T ss_dssp             C-CC---
T ss_pred             C-cChhh
Confidence            4 55444

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.60  E-value=0.14  Score=35.59  Aligned_cols=57  Identities=16%  Similarity=0.320  Sum_probs=43.6

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhccCCCCc
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF  196 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  196 (227)
                      .+..|+.|+..+ ....|..|....-..+...|..|+..+.. ..+..|...+.|+.++
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            457899999988 56689999877777788899999988754 5678899988887654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.51  E-value=0.073  Score=31.59  Aligned_cols=38  Identities=24%  Similarity=0.501  Sum_probs=16.0

Q ss_pred             ccCCCCCcccCCchhHHHHHhhccCCCCccccccccccc
Q psy16147        168 YKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFS  206 (227)
Q Consensus       168 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  206 (227)
                      |.|+.|+..+. +..+..|...-.+...|.|..|++.|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            34444443333 223334443333333344555555554

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.30  E-value=0.22  Score=24.59  Aligned_cols=25  Identities=24%  Similarity=0.320  Sum_probs=22.3

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHh
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      ...+.|..|+..|.+..++..|.+-
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            4568899999999999999999875

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.63  E-value=0.5  Score=23.33  Aligned_cols=25  Identities=24%  Similarity=0.316  Sum_probs=18.0

Q ss_pred             CccccCcCccccCChhHHHhHHhhh
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEH  162 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h  162 (227)
                      ....|..|+..|.....+..|.+..
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             CcCeeccccceehhhHHHhhhheec
Confidence            4566888888888887777776543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.78  E-value=0.23  Score=23.62  Aligned_cols=21  Identities=24%  Similarity=0.581  Sum_probs=19.5

Q ss_pred             cCCcchhhhcChhHHHHHHHh
Q psy16147         43 LCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        43 ~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      .|..|.+.++...||..|++-
T Consensus        11 hcrfckkkysdvknlikhire   31 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            499999999999999999985

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=87.04  E-value=1.8  Score=23.48  Aligned_cols=47  Identities=17%  Similarity=0.352  Sum_probs=27.1

Q ss_pred             cCCCCCcccCCchhHHHHHhhccCCCCcccccccc-cccCchhHHHhhhcc
Q psy16147        169 KCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLK-RFSHSGSYSQHMNHR  218 (227)
Q Consensus       169 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-~f~~~~~l~~H~~~~  218 (227)
                      .|++|.........|..|.......   +|++|-. .-.+++.|..|.+..
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfkvC   52 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYSIC   52 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHTTC
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHHHh
Confidence            5666666666666777666654322   4555532 334566677666543

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=87.01  E-value=0.23  Score=26.30  Aligned_cols=12  Identities=17%  Similarity=0.916  Sum_probs=6.6

Q ss_pred             ccccCcCccccC
Q psy16147        139 QFLCDQCDKVFA  150 (227)
Q Consensus       139 ~~~C~~C~~~f~  150 (227)
                      .|+|.+||..+-
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            355666665543

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=85.80  E-value=0.57  Score=21.84  Aligned_cols=22  Identities=23%  Similarity=0.489  Sum_probs=18.3

Q ss_pred             ccccCcCccccCChhHHHhHHh
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKY  160 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~  160 (227)
                      .+.|++|....+....|+.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4789999999999988888854

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.45  E-value=0.29  Score=29.02  Aligned_cols=26  Identities=15%  Similarity=0.250  Sum_probs=16.4

Q ss_pred             ccccccccccc-------CchhHHHhhhccccc
Q psy16147        196 FQCCKCLKRFS-------HSGSYSQHMNHRYSY  221 (227)
Q Consensus       196 ~~C~~C~~~f~-------~~~~l~~H~~~~h~~  221 (227)
                      -.|..|++.+.       --+.|.+|++.+|..
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            34666666555       235788888877754

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=82.74  E-value=0.52  Score=33.81  Aligned_cols=26  Identities=23%  Similarity=0.555  Sum_probs=23.5

Q ss_pred             CCcccCCcchhhhcC-hhHHHHHHHhc
Q psy16147         39 EGQFLCDQCDKVFAK-HSSLARHKYEH   64 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~-~~~L~~H~~~h   64 (227)
                      ..+..|-.|+..|.+ ...|+.|+..|
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            568999999999987 99999999876

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.45  E-value=0.5  Score=28.68  Aligned_cols=27  Identities=30%  Similarity=0.631  Sum_probs=21.5

Q ss_pred             CCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         38 GEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        38 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .+....|-+||+.|+   .|..|+..+++.
T Consensus        18 ~~d~iiClecGK~fK---~LkRHL~~~hgl   44 (87)
T 2jsp_A           18 QDDHIVCLECGGSFK---SLKRHLTTHHSM   44 (87)
T ss_dssp             CSSCEECTBTCCEES---BHHHHHHHTTCS
T ss_pred             CCCceEecccchhhH---HHHHHHHHccCC
Confidence            345578999999998   488999997664

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=81.81  E-value=0.68  Score=29.18  Aligned_cols=12  Identities=33%  Similarity=0.728  Sum_probs=6.8

Q ss_pred             CccccCcCcccc
Q psy16147        138 GQFLCDQCDKVF  149 (227)
Q Consensus       138 ~~~~C~~C~~~f  149 (227)
                      .++.|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            345566666555

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=81.74  E-value=1.2  Score=23.41  Aligned_cols=13  Identities=38%  Similarity=0.996  Sum_probs=6.1

Q ss_pred             ccCCCCCcccCCc
Q psy16147        168 YKCVECPKAFKHK  180 (227)
Q Consensus       168 ~~C~~C~~~f~~~  180 (227)
                      |.|..|+..|+..
T Consensus         4 Y~C~rCg~~fs~~   16 (48)
T 4ayb_P            4 YRCGKCWKTFTDE   16 (48)
T ss_dssp             -CCCCTTTTCCCC
T ss_pred             EEeeccCCCccHH
Confidence            4555555555443

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=81.44  E-value=0.52  Score=33.84  Aligned_cols=11  Identities=18%  Similarity=0.177  Sum_probs=6.0

Q ss_pred             CccCCCCCccc
Q psy16147        167 PYKCVECPKAF  177 (227)
Q Consensus       167 ~~~C~~C~~~f  177 (227)
                      .|.|.+||..+
T Consensus       171 ~~~C~~CG~i~  181 (202)
T 1yuz_A          171 FHLCPICGYIH  181 (202)
T ss_dssp             EEECSSSCCEE
T ss_pred             EEEECCCCCEE
Confidence            45565555544

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=81.16  E-value=0.64  Score=28.22  Aligned_cols=27  Identities=33%  Similarity=0.640  Sum_probs=18.5

Q ss_pred             CCccCCCCCcccCCchhHHHHHhhccCCCC
Q psy16147        166 RPYKCVECPKAFKHKHHLTEHKRLHSGEKP  195 (227)
Q Consensus       166 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  195 (227)
                      ....|-+||+.|.   .|..|+..+.|-.|
T Consensus        20 d~iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             CceEecccchhhH---HHHHHHHHccCCCH
Confidence            4467777777776   45677777667765

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.97  E-value=0.8  Score=24.86  Aligned_cols=22  Identities=23%  Similarity=0.368  Sum_probs=18.0

Q ss_pred             cccccccccccCchhHHHhhhc
Q psy16147        196 FQCCKCLKRFSHSGSYSQHMNH  217 (227)
Q Consensus       196 ~~C~~C~~~f~~~~~l~~H~~~  217 (227)
                      -.|..|+.+|..+..++.|+=+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            5788899888888888888753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	227
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-10
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-07
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-07
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	7e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.004
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-06
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	5e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	3e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	0.004

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (124), Expect = 3e-10
 Identities = 18/32 (56%), Positives = 24/32 (75%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
           HSG++PY CVEC KAF     L +H+R+H+GE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 190 HSGEKPFQCCKCLKRFSHSGSYSQHM 215
           HSGEKP+ C +C K FS S    QH 
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQ 27

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSG 164
           SGE  + C +C K F++ S L +H+  H+G
Sbjct: 3   SGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (122), Expect = 7e-10
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 163 SGQRPYKCVECPKAFKHKHHLTEH-KRLHSGEKPFQC 198
           S  +PY C  C K F    HL  H K++H+ E+P +C
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 2e-05
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 135 SGEGQFLCDQCDKVFAKHSSLARH-KYEHSGQRPYKC 170
           S    ++C  C K F++   L  H K  H+ +RP+KC
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 4e-04
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 191 SGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYR 226
           S  KP+ C  C K FS     + H+   ++  +P++
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (120), Expect = 1e-09
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 156 ARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
            R +++   +R YKC EC K+F H   L++H+R H+GE
Sbjct: 1   GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (91), Expect = 1e-05
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
            +      + ++C +C K FSHS   S+H 
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHR 32

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 46.8 bits (112), Expect = 1e-08
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           R + C  C +AF  + HL  H R H+ EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (111), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           H+G++PY C  C K F+ K  L  H + +    
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 1e-05
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 188 RLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
           R H+GEKP+ C  C K F        H 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHF 28

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 5e-08
 Identities = 23/47 (48%), Positives = 25/47 (53%)

Query: 144 QCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH 190
           QC K F   S   RH   H G RPY C  C K FK KHHL  H ++H
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 3e-07
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
           + Y C +C K+F HK     H  +H G +P+ C  C K+F        HM
Sbjct: 2   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 168 YKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQC 198
           + C E  C K+F  K HL EH +LHS  + + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 10/29 (34%)

Query: 142 CDQCDKVFAKHSSLARHKYEHSGQRPYKC 170
              C K F     L  H   HS  R Y C
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (103), Expect = 2e-07
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGE 193
            SG+RP+ C  C  AF  K +   H ++H+  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 190 HSGEKPFQCCKCLKRFSHSGSYSQHM 215
            SG++PF C  CL  F+   + ++H+
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHL 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (102), Expect = 4e-07
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           + + C ECPK F    HL++H + H  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 6e-07
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 162 HSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEK 194
           HSG++PY+C  C   F     +  H      E 
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 188 RLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
           R HSGEKP++C  C  RF+ SG+   H+
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHI 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 7e-07
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 166 RPYKC--VECPKAFKHKHHLTEHKRLHSGEK 194
           RP+ C    C K F     L  HKR H+GEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (100), Expect = 7e-07
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSG 192
           Q+P++C  C + F    HLT H R H+G
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.004
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 193 EKPFQCCKCLKRFSHSGSYSQHM 215
           +KPFQC  C++ FS S   + H+
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHI 23

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.3 bits (97), Expect = 2e-06
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 158 HKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH 190
                +G +P++C +C ++F    HL  H++ H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHM 215
             R  +G KPFQC  C + FS S   + H 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (95), Expect = 3e-06
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 166 RPYKCVECPKAFKHKHHLTEHKRLHS 191
           +PYKC+EC KAF     L  H+R+H+
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 5e-06
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 166 RPYKCVE--CPKAFKHKHHLTEHKRLHSGE 193
           +P+KC    C K++    +L  H R H+GE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 166 RPYKCVE--CPKAFKHKHHLTEHKRLHSGE 193
           +P++C    C K F    +L  H R+H+G+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 166 RPYKCVE--CPKAFKHKHHLTEHKRLHSG 192
           RPY C    C + F     LT H R+H+G
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (85), Expect = 9e-05
 Identities = 7/44 (15%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 153 SSLARHKYEHSGQRPYKCVECP--KAFKHKHHLTEHKRLHSGEK 194
            S+ ++  +    + ++C+     K FK ++++  H + H  ++
Sbjct: 5   GSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 166 RPYKCVE--CPKAFKHKHHLTEHKRLHSGE 193
           RPY C    C KAF   H L  HK+ H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (72), Expect = 0.004
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKPF 196
           ++   C  C K F+  +HL  HK  HSGEKP+
Sbjct: 3   RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	227
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.65
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.3
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.29
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.26
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.25
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.22
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.22
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.19
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.18
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.17
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.15
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.09
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.04
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.02
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.98
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.96
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.89
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.86
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.84
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.8
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.79
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.78
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.77
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.67
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.6
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.56
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.5
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.49
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.44
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.4
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.38
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.34
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.33
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.32
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.31
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.27
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.25
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.05
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.05
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.96
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.95
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.94
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.89
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.88
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.86
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.84
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.81
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.68
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.62
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.6
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.58
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.52
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.51
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.47
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.46
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.44
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.37
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.33
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.32
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.28
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.21
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.21
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.1
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.0
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.98
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.93
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.92
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.86
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.82
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.79
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.64
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.61
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.56
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.54
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.4
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.34
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.23
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.16
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.09
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.95
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.9
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	95.88
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.71
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.61
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.58
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.21
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	95.09
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.79
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.75
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.74
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.74
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.63
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.29
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.99
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.64
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.51
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.13
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.72
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.44
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.99
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.89
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.34
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.76
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.61
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.4
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	86.4
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	84.04
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	82.45

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3.9e-17  Score=91.57  Aligned_cols=52  Identities=33%  Similarity=0.702  Sum_probs=37.9

Q ss_pred             CCCccCCCCCcccCCchhHHHHHhhccCCCCcccccccccccCchhHHHhhhc
Q psy16147        165 QRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNH  217 (227)
Q Consensus       165 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  217 (227)
                      +++|.|+ |++.|.....|..|+++|.+++||.|.+|+++|.+.+.|..|++.
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            4677773 777777777777777777777777777777777777777777764

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.6e-16  Score=87.54  Aligned_cols=53  Identities=45%  Similarity=0.850  Sum_probs=50.7

Q ss_pred             CCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccCCchhHHHHHhhc
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  190 (227)
                      +++|.| .||+.|.....|..|+++|+++++|.|++|++.|.....|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            478999 59999999999999999999999999999999999999999999886

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.6e-13  Score=65.28  Aligned_cols=32  Identities=34%  Similarity=0.625  Sum_probs=30.6

Q ss_pred             CCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         36 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      |+|++||.|.+||+.|...++|..|+++|.+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            89999999999999999999999999999864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=7.9e-13  Score=67.52  Aligned_cols=36  Identities=25%  Similarity=0.541  Sum_probs=33.8

Q ss_pred             cCCCCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         32 CADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        32 ~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      |...|++++||.|++||+.|...++|..|+++|++|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            577899999999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=1e-12  Score=65.23  Aligned_cols=31  Identities=32%  Similarity=0.602  Sum_probs=29.5

Q ss_pred             CCCCCcccCCcchhhhcChhHHHHHHHhccc
Q psy16147         36 NSGEGQFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      |+|++||.|++|++.|...++|..|+++|..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            7899999999999999999999999999964

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=2.1e-12  Score=65.42  Aligned_cols=35  Identities=29%  Similarity=0.644  Sum_probs=32.6

Q ss_pred             ccCCCCCCCCcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         31 SCADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        31 ~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      +|...|+||+||.|++|++.|...++|..|+++|.
T Consensus         1 gh~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            36788999999999999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.5e-12  Score=65.37  Aligned_cols=35  Identities=40%  Similarity=0.812  Sum_probs=30.5

Q ss_pred             hhccCCCCcccccccccccCchhHHHhhhcccccc
Q psy16147        188 RLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYC  222 (227)
Q Consensus       188 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  222 (227)
                      ++|+|++||+|+.|++.|.+.++|+.|++.+|+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            46899999999999999999999999988777754

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3.1e-12  Score=64.32  Aligned_cols=33  Identities=27%  Similarity=0.507  Sum_probs=30.8

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .|+||+||.|.+||+.|...++|..|+++|+++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            589999999999999999999999999999753

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=7e-12  Score=63.81  Aligned_cols=34  Identities=32%  Similarity=0.747  Sum_probs=17.4

Q ss_pred             CccccCcCccccCChhHHHhHHh-hhcCCCCccCC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKY-EHSGQRPYKCV  171 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  171 (227)
                      +||.|.+||++|....+|..|++ .|++++||.|+
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            44555555555555555555543 35555555554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=4.4e-12  Score=64.57  Aligned_cols=36  Identities=36%  Similarity=0.879  Sum_probs=25.3

Q ss_pred             CCCccCCCCCcccCCchhHHHHHh-hccCCCCccccc
Q psy16147        165 QRPYKCVECPKAFKHKHHLTEHKR-LHSGEKPFQCCK  200 (227)
Q Consensus       165 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  200 (227)
                      ++||.|.+|++.|.....|..|++ +|.+++||+|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            567777777777777777777764 577777777753

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=2.6e-12  Score=65.09  Aligned_cols=33  Identities=36%  Similarity=0.632  Sum_probs=25.0

Q ss_pred             HHhhccCCCCcccccccccccCchhHHHhhhcc
Q psy16147        186 HKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       186 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      |.+.|+|++||+|..|+++|.+.++|..|++.|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            567777778888877888888888888777754

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4.5e-12  Score=63.71  Aligned_cols=33  Identities=33%  Similarity=0.702  Sum_probs=26.7

Q ss_pred             hhccCCCCcccccccccccCchhHHHhhhcccc
Q psy16147        188 RLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       188 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  220 (227)
                      ++|+|++||+|..|+++|.+.+.|..|++.|+.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            468888888888888888888888888886654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=4.2e-12  Score=64.78  Aligned_cols=30  Identities=30%  Similarity=0.592  Sum_probs=13.6

Q ss_pred             HhhccCCCCcccccccccccCchhHHHhhh
Q psy16147        187 KRLHSGEKPFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       187 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      +++|.+++||.|+.||++|.+.++|..|++
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r   33 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRR   33 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHT
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCc
Confidence            344444444444444444444444444444

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=4.2e-12  Score=59.54  Aligned_cols=28  Identities=25%  Similarity=0.543  Sum_probs=26.5

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhccc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      |+||.|++|++.|....+|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999964

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.2e-11  Score=61.97  Aligned_cols=32  Identities=22%  Similarity=0.505  Sum_probs=28.9

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHHhccc
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      .|+||+||.|++|++.|...++|..|++.+++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            58999999999999999999999999876543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.09  E-value=2e-11  Score=57.88  Aligned_cols=28  Identities=32%  Similarity=0.731  Sum_probs=26.6

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +||.|++||+.|....+|..|+++|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            6899999999999999999999999876

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.7e-11  Score=58.65  Aligned_cols=27  Identities=52%  Similarity=0.904  Sum_probs=13.3

Q ss_pred             ccCCCCcccccccccccCchhHHHhhh
Q psy16147        190 HSGEKPFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       190 h~~~~~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      |++++||+|..|+++|.+.+.|..|++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhcc
Confidence            444444444444444444444444444

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.1e-11  Score=56.37  Aligned_cols=28  Identities=29%  Similarity=0.610  Sum_probs=26.5

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +||.|.+||+.|...++|..|+++|.++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            6899999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=6.9e-11  Score=58.49  Aligned_cols=29  Identities=31%  Similarity=0.779  Sum_probs=21.4

Q ss_pred             ccCCCCcccccccccccCchhHHHhhhcc
Q psy16147        190 HSGEKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       190 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      |+|++||+|.+|++.|.+.++|..|++.|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcccc
Confidence            56777777777777777777777777743

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=5.7e-11  Score=54.14  Aligned_cols=26  Identities=31%  Similarity=0.682  Sum_probs=24.6

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      |||+|.+||+.|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999983

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.96  E-value=2.2e-10  Score=54.22  Aligned_cols=27  Identities=33%  Similarity=0.858  Sum_probs=16.6

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      ||.|++|+++|...+.|.+|+++|+|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            556666666666666666666666654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=3.2e-10  Score=52.97  Aligned_cols=27  Identities=30%  Similarity=0.664  Sum_probs=17.8

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      +||.|++|+++|...+.|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            566666666666666666666666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=6.8e-10  Score=52.40  Aligned_cols=22  Identities=32%  Similarity=0.726  Sum_probs=7.9

Q ss_pred             ccCcCccccCChhHHHhHHhhh
Q psy16147        141 LCDQCDKVFAKHSSLARHKYEH  162 (227)
Q Consensus       141 ~C~~C~~~f~~~~~l~~H~~~h  162 (227)
                      .|++||+.|...+.|..|+++|
T Consensus         4 ~C~~C~k~F~~~s~L~~H~r~H   25 (29)
T d1sp1a_           4 ACPECPKRFMRSDHLSKHIKTH   25 (29)
T ss_dssp             CCTTTTCCCSCSHHHHHHHHGG
T ss_pred             ECCcCCCeecchHHhhhhcCcc
Confidence            3333333333333333333333

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.86  E-value=2e-10  Score=61.11  Aligned_cols=35  Identities=20%  Similarity=0.284  Sum_probs=31.8

Q ss_pred             CCCCCCCCcccCCc--chhhhcChhHHHHHHHhcccc
Q psy16147         33 ADDNSGEGQFLCDQ--CDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        33 ~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      ...|++++||.|.+  |++.|...++|+.|+++|.++
T Consensus        10 h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhhccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            33589999999988  999999999999999999875

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=6.2e-10  Score=52.86  Aligned_cols=28  Identities=21%  Similarity=0.406  Sum_probs=26.2

Q ss_pred             CcccCCc--chhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +||.|++  ||+.|...++|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.2e-09  Score=54.40  Aligned_cols=32  Identities=38%  Similarity=0.692  Sum_probs=19.1

Q ss_pred             cccCc--CccccCChhHHHhHHhhhcCCCCccCC
Q psy16147        140 FLCDQ--CDKVFAKHSSLARHKYEHSGQRPYKCV  171 (227)
Q Consensus       140 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  171 (227)
                      |.|+.  |+++|.....|.+|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44544  666666666666666666666666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=6e-10  Score=53.01  Aligned_cols=28  Identities=29%  Similarity=0.400  Sum_probs=26.0

Q ss_pred             CcccCCc--chhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +||.|++  ||+.|....+|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899998  999999999999999999764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=3.6e-10  Score=60.04  Aligned_cols=32  Identities=22%  Similarity=0.598  Sum_probs=15.5

Q ss_pred             hcCCCCccCCC--CCcccCCchhHHHHHhhccCC
Q psy16147        162 HSGQRPYKCVE--CPKAFKHKHHLTEHKRLHSGE  193 (227)
Q Consensus       162 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  193 (227)
                      |.++++|.|..  |++.|.....|..|++.|+|+
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            44444444443  444444444444444444444

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.4e-09  Score=54.17  Aligned_cols=32  Identities=44%  Similarity=0.948  Sum_probs=27.8

Q ss_pred             ccCCC--CCcccCCchhHHHHHhhccCCCCcccc
Q psy16147        168 YKCVE--CPKAFKHKHHLTEHKRLHSGEKPFQCC  199 (227)
Q Consensus       168 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  199 (227)
                      |.|+.  |++.|.....|..|+++|+|++||+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67766  999999999999999999999999886

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=9.7e-10  Score=49.98  Aligned_cols=25  Identities=32%  Similarity=0.707  Sum_probs=19.9

Q ss_pred             CCcccccccccccCchhHHHhhhcc
Q psy16147        194 KPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       194 ~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +||+|..||++|.+.+.|..|++.|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            5788888888888888888888754

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.2e-09  Score=50.45  Aligned_cols=28  Identities=36%  Similarity=0.705  Sum_probs=25.6

Q ss_pred             CcccCC--cchhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCD--QCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +||.|+  .||+.|....+|..|+++|+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            689996  4999999999999999999875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=7.8e-09  Score=49.73  Aligned_cols=28  Identities=39%  Similarity=0.859  Sum_probs=26.1

Q ss_pred             CCcccCCc--chhhhcChhHHHHHHHhccc
Q psy16147         39 EGQFLCDQ--CDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        39 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~   66 (227)
                      |+||.|.+  ||+.|....+|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            68999999  99999999999999999963

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.4e-08  Score=48.02  Aligned_cols=27  Identities=26%  Similarity=0.612  Sum_probs=16.5

Q ss_pred             ccccCc--CccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCDQ--CDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      ||+|+.  |+++|...+.|..|+++|+|+
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            556655  666666666666666666553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.6e-08  Score=47.91  Aligned_cols=28  Identities=32%  Similarity=0.576  Sum_probs=17.7

Q ss_pred             CccccCc--CccccCChhHHHhHHhhhcCC
Q psy16147        138 GQFLCDQ--CDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       138 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      +||.|+.  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3566655  666666666666666666653

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=6.4e-09  Score=48.82  Aligned_cols=27  Identities=30%  Similarity=0.667  Sum_probs=25.1

Q ss_pred             CcccCCc--chhhhcChhHHHHHHHhccc
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~   66 (227)
                      +||.|.+  ||+.|....+|..|+++|.+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899999  99999999999999999964

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.1e-08  Score=47.37  Aligned_cols=26  Identities=31%  Similarity=0.724  Sum_probs=24.4

Q ss_pred             CcccCCc--chhhhcChhHHHHHHHhcc
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~~~h~   65 (227)
                      +||.|+.  ||+.|....+|+.|+++|.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899999  9999999999999999984

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=4.4e-08  Score=46.81  Aligned_cols=27  Identities=41%  Similarity=0.920  Sum_probs=16.5

Q ss_pred             ccccC--cCccccCChhHHHhHHhhhcCC
Q psy16147        139 QFLCD--QCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       139 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      ||.|+  .|+++|...++|.+|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            55663  3666666666666666666654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.44  E-value=6.8e-08  Score=46.34  Aligned_cols=27  Identities=22%  Similarity=0.589  Sum_probs=19.4

Q ss_pred             CCCccccc--ccccccCchhHHHhhhccc
Q psy16147        193 EKPFQCCK--CLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       193 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h  219 (227)
                      |+||.|++  |+++|.+.++|..|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            46777766  7777777777777777553

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=5.8e-08  Score=43.23  Aligned_cols=27  Identities=37%  Similarity=0.678  Sum_probs=25.3

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      |+||.|++||+.|......+.|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999983

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=6.3e-08  Score=41.64  Aligned_cols=26  Identities=27%  Similarity=0.571  Sum_probs=23.6

Q ss_pred             cccCCcchhhhcChhHHHHHHHhccc
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      |..|+.|++-|+.+..|+.|+|.|.+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56899999999999999999998853

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.7e-07  Score=40.30  Aligned_cols=26  Identities=31%  Similarity=0.698  Sum_probs=18.0

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      |++|+.|++-|...+.|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            35677777777777777777776654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=1.1e-07  Score=44.53  Aligned_cols=27  Identities=33%  Similarity=0.789  Sum_probs=17.5

Q ss_pred             CccccCc--CccccCChhHHHhHHhhhcC
Q psy16147        138 GQFLCDQ--CDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       138 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  164 (227)
                      +||.|+.  |+++|...+.|.+|++.|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3566655  66777776666666666654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.1e-07  Score=41.93  Aligned_cols=28  Identities=29%  Similarity=0.421  Sum_probs=26.1

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhccc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      ++||+|+.|.+.-.+.+.|..|+|.|.+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            5899999999999999999999999965

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=7.1e-08  Score=44.63  Aligned_cols=25  Identities=28%  Similarity=0.677  Sum_probs=20.1

Q ss_pred             CCccccc--ccccccCchhHHHhhhcc
Q psy16147        194 KPFQCCK--CLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       194 ~~~~C~~--C~~~f~~~~~l~~H~~~~  218 (227)
                      +||.|+.  |+++|.+.++|+.|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            5788877  888888888888888755

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.4e-07  Score=41.29  Aligned_cols=30  Identities=30%  Similarity=0.449  Sum_probs=26.4

Q ss_pred             CCcccccccccccCchhHHHhhhccccccc
Q psy16147        194 KPFQCCKCLKRFSHSGSYSQHMNHRYSYCK  223 (227)
Q Consensus       194 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  223 (227)
                      +||+|..|.+.....++|+.|+++.|+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            589999999999999999999999988764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.9e-07  Score=42.10  Aligned_cols=28  Identities=21%  Similarity=0.481  Sum_probs=26.2

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhccc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHSV   66 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~   66 (227)
                      |+||.|.+|+..|+.+..+.-|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            6899999999999999999999999865

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=6.2e-07  Score=40.41  Aligned_cols=27  Identities=22%  Similarity=0.576  Sum_probs=21.3

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      +||.|++|+..|..++.|..|.++|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            577888888888888888888887765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.5e-06  Score=38.21  Aligned_cols=27  Identities=30%  Similarity=0.514  Sum_probs=18.8

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      +||+|..|.+.....++|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            566777777777777777777776665

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.7e-06  Score=39.93  Aligned_cols=30  Identities=47%  Similarity=0.966  Sum_probs=19.7

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCCCc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQRPY  168 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  168 (227)
                      ...|..||+.|.....|.+|..+|.+++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345666666666666666666666666665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.8e-06  Score=38.89  Aligned_cols=26  Identities=27%  Similarity=0.567  Sum_probs=23.8

Q ss_pred             CcccCCc--chhhhcChhHHHHHHHhcc
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~~~h~   65 (227)
                      +||.|.+  |++.++..++|+.|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            6899999  9999999999999999764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.6e-06  Score=39.30  Aligned_cols=29  Identities=48%  Similarity=0.850  Sum_probs=14.2

Q ss_pred             ccCCCCCcccCCchhHHHHHhhccCCCCc
Q psy16147        168 YKCVECPKAFKHKHHLTEHKRLHSGEKPF  196 (227)
Q Consensus       168 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  196 (227)
                      ..|+.|++.|.....|.+|.-.|.+++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34444555555444444444445444444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=1.8e-06  Score=38.94  Aligned_cols=27  Identities=30%  Similarity=0.675  Sum_probs=23.5

Q ss_pred             CCccccc--ccccccCchhHHHhhhcccc
Q psy16147        194 KPFQCCK--CLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       194 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  220 (227)
                      +||.|.+  |++++...++|++|++++|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788877  99999999999999998774

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=3.1e-06  Score=36.92  Aligned_cols=26  Identities=38%  Similarity=0.599  Sum_probs=24.6

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      +||.|..|++.....++|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78999999999999999999999984

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.1e-06  Score=36.33  Aligned_cols=26  Identities=38%  Similarity=0.892  Sum_probs=18.2

Q ss_pred             cccCcCccccCChhHHHhHHhhhcCC
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      ++|..||++|...+.|.+|...|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            56777777777777777777766653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=2.9e-06  Score=41.46  Aligned_cols=28  Identities=36%  Similarity=0.807  Sum_probs=22.6

Q ss_pred             cCCCCcccccccccccCchhHHHhhhcc
Q psy16147        191 SGEKPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       191 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +|-+||.|.+|++.|.++.++.+|..+.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            3668889999999999988888887644

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=3.1e-06  Score=37.48  Aligned_cols=23  Identities=22%  Similarity=0.592  Sum_probs=21.7

Q ss_pred             cccCCcchhhhcChhHHHHHHHh
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      ||.|..|+..|++++||..||..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68999999999999999999985

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=9.3e-06  Score=35.90  Aligned_cols=26  Identities=35%  Similarity=0.562  Sum_probs=14.8

Q ss_pred             ccCCCCCcccCCchhHHHHHhhccCC
Q psy16147        168 YKCVECPKAFKHKHHLTEHKRLHSGE  193 (227)
Q Consensus       168 ~~C~~C~~~f~~~~~l~~H~~~h~~~  193 (227)
                      |.|+.|+..+.-.+.|..|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45555555555555555555555554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=1e-05  Score=34.80  Aligned_cols=25  Identities=28%  Similarity=0.445  Sum_probs=23.4

Q ss_pred             cCCcchhhhcChhHHHHHHHhcccc
Q psy16147         43 LCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        43 ~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +|+.|.+.|.++..|+.|.|.|.++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            6999999999999999999999875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.7e-05  Score=35.18  Aligned_cols=26  Identities=23%  Similarity=0.392  Sum_probs=23.7

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      +||+|+.|.+.....+||+.|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            68999999999999999999999743

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=3.2e-05  Score=34.16  Aligned_cols=28  Identities=29%  Similarity=0.621  Sum_probs=25.5

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcCCC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSGQR  166 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  166 (227)
                      .|.|+.||....-.+-|+.|+++|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3789999999999999999999999864

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.5e-05  Score=34.09  Aligned_cols=24  Identities=42%  Similarity=0.845  Sum_probs=12.3

Q ss_pred             cCCCCCcccCCchhHHHHHhhccC
Q psy16147        169 KCVECPKAFKHKHHLTEHKRLHSG  192 (227)
Q Consensus       169 ~C~~C~~~f~~~~~l~~H~~~h~~  192 (227)
                      .|.+|++.|.....|.+|+-.|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455555555555555555555544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.4e-05  Score=34.52  Aligned_cols=25  Identities=28%  Similarity=0.755  Sum_probs=18.1

Q ss_pred             CcccccccccccCchhHHHhhhccc
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      ||.|..|..+|.+..+|..|+++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            5677777777777777777777553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.51  E-value=4.3e-05  Score=32.25  Aligned_cols=22  Identities=41%  Similarity=0.866  Sum_probs=10.9

Q ss_pred             cCCCCCcccCCchhHHHHHhhc
Q psy16147        169 KCVECPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       169 ~C~~C~~~f~~~~~l~~H~~~h  190 (227)
                      +|..|.+.|..++.|.+|++.|
T Consensus         2 kcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGT
T ss_pred             cccchHHHHHHHHHHHHHHHhh
Confidence            4444555555555555554444

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=2.6e-05  Score=38.00  Aligned_cols=27  Identities=30%  Similarity=0.559  Sum_probs=24.3

Q ss_pred             CCCCcccCCcchhhhcChhHHHHHHHh
Q psy16147         37 SGEGQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      +|.+||.|.+|++.|-.+.++..|.-.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            477999999999999999999999753

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.46  E-value=3e-05  Score=35.16  Aligned_cols=27  Identities=22%  Similarity=0.461  Sum_probs=21.4

Q ss_pred             CcccccccccccCchhHHHhhhccccc
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNHRYSY  221 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  221 (227)
                      ||.|.+|++.|.++-.|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            678888888888888888888776664

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.44  E-value=3.7e-05  Score=37.29  Aligned_cols=29  Identities=21%  Similarity=0.418  Sum_probs=25.9

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      .+.|.|.+|++.|.+..+|--||+.|..+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcch
Confidence            46799999999999999999999999543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.37  E-value=5.3e-05  Score=33.33  Aligned_cols=29  Identities=28%  Similarity=0.526  Sum_probs=26.1

Q ss_pred             CCcccCCcchhhhcChhHHHHHHHhcccc
Q psy16147         39 EGQFLCDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +..|.|..|...|..+-.|+.||-.|.++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999998763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=0.00011  Score=32.28  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=17.3

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      ..|.|..|...|.....|+.||-+|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            345666666666666666666666655

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.32  E-value=9.8e-05  Score=35.76  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=17.2

Q ss_pred             CccccCcCccccCChhHHHhHHhhhcC
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      +.|.|.+|++.|.+...|--|++.|..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcc
Confidence            456666666666666666666666643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=5.3e-05  Score=31.98  Aligned_cols=23  Identities=26%  Similarity=0.769  Sum_probs=19.6

Q ss_pred             CcccccccccccCchhHHHhhhc
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNH  217 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~  217 (227)
                      ||+|..|...|.++.+|..|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            78899999999999999888753

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.00013  Score=31.25  Aligned_cols=26  Identities=31%  Similarity=0.646  Sum_probs=18.2

Q ss_pred             ccCcCccccCChhHHHhHHhhhcCCC
Q psy16147        141 LCDQCDKVFAKHSSLARHKYEHSGQR  166 (227)
Q Consensus       141 ~C~~C~~~f~~~~~l~~H~~~h~~~~  166 (227)
                      .|+.|.+.|.+..-|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            47777777777777777777776653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=6.5e-05  Score=33.23  Aligned_cols=25  Identities=24%  Similarity=0.452  Sum_probs=22.9

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEH   64 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h   64 (227)
                      +||+|+.|....+..+||..|++.-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            5899999999999999999999863

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=6.7e-05  Score=33.19  Aligned_cols=27  Identities=26%  Similarity=0.536  Sum_probs=18.2

Q ss_pred             CCcccccccccccCchhHHHhhhcccc
Q psy16147        194 KPFQCCKCLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       194 ~~~~C~~C~~~f~~~~~l~~H~~~~h~  220 (227)
                      +||+|..|.....+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            467777777777777777777765553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.10  E-value=0.00016  Score=30.42  Aligned_cols=23  Identities=22%  Similarity=0.592  Sum_probs=21.3

Q ss_pred             cccccccccccCchhHHHhhhcc
Q psy16147        196 FQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       196 ~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      |+|..|.++|.-++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            68999999999999999999965

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00017  Score=31.27  Aligned_cols=25  Identities=28%  Similarity=0.599  Sum_probs=17.7

Q ss_pred             CCcccccccccccCchhHHHhhhcc
Q psy16147        194 KPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       194 ~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      +||+|..|.+.-...++|.+|++.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            5677777777777777777777643

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00019  Score=34.48  Aligned_cols=28  Identities=36%  Similarity=0.748  Sum_probs=24.9

Q ss_pred             CCCcccCCc--chhhhcChhHHHHHHHhcc
Q psy16147         38 GEGQFLCDQ--CDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        38 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~   65 (227)
                      .++||.|..  |+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            479999966  9999999999999998873

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.93  E-value=0.00015  Score=31.93  Aligned_cols=28  Identities=32%  Similarity=0.635  Sum_probs=24.6

Q ss_pred             CcccCCc--chhhhcChhHHHHHHHhcccc
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      +||.|..  |.+.|.+...|.+|..+|.++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788887  999999999999999988753

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.92  E-value=0.00019  Score=31.50  Aligned_cols=25  Identities=32%  Similarity=0.662  Sum_probs=19.4

Q ss_pred             CCccccc--ccccccCchhHHHhhhcc
Q psy16147        194 KPFQCCK--CLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       194 ~~~~C~~--C~~~f~~~~~l~~H~~~~  218 (227)
                      .||+|+.  |++.|...+.|++|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4678865  888888888888887754

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.86  E-value=0.00025  Score=31.13  Aligned_cols=25  Identities=40%  Similarity=0.687  Sum_probs=22.6

Q ss_pred             CcccCCc--chhhhcChhHHHHHHHhc
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHKYEH   64 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~~~h   64 (227)
                      .||.|..  |++.|...+.|++|-++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4789987  999999999999999876

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00029  Score=30.66  Aligned_cols=25  Identities=20%  Similarity=0.393  Sum_probs=22.6

Q ss_pred             cccCCcchhhhcChhHHHHHHHhcc
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      |-+|..|++..++++.|+.|-|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4579999999999999999999984

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00015  Score=32.79  Aligned_cols=26  Identities=35%  Similarity=0.830  Sum_probs=23.2

Q ss_pred             CcccCCc--chhhhcChhHHHHHH-Hhcc
Q psy16147         40 GQFLCDQ--CDKVFAKHSSLARHK-YEHS   65 (227)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~   65 (227)
                      +||.|+.  |++.|++.+.--.|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            5899999  999999999999997 7774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.64  E-value=0.00038  Score=29.27  Aligned_cols=22  Identities=23%  Similarity=0.659  Sum_probs=20.8

Q ss_pred             cccCCcchhhhcChhHHHHHHH
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKY   62 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~   62 (227)
                      ||.|..|+..|-.+..|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999985

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00034  Score=31.62  Aligned_cols=27  Identities=37%  Similarity=0.721  Sum_probs=18.0

Q ss_pred             CCccccc--ccccccCchhHHHhhhcccc
Q psy16147        194 KPFQCCK--CLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       194 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  220 (227)
                      +||.|..  |.+.|.+.++--+|+..-|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4677766  77777777777777643443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.00044  Score=34.86  Aligned_cols=26  Identities=35%  Similarity=0.751  Sum_probs=23.3

Q ss_pred             CcccCCcchhhhcChhHHHHHHHhcc
Q psy16147         40 GQFLCDQCDKVFAKHSSLARHKYEHS   65 (227)
Q Consensus        40 ~~~~C~~C~~~f~~~~~L~~H~~~h~   65 (227)
                      ..|.|.+||+.|+....|++|-..|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45899999999999999999988773

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.54  E-value=0.00049  Score=31.09  Aligned_cols=25  Identities=32%  Similarity=0.794  Sum_probs=22.1

Q ss_pred             cccCCcchhhhcChhHHHHHHHh-cc
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYE-HS   65 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~-h~   65 (227)
                      ||.|.+|+..|..+.-|..|... |.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            69999999999999999999764 53

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.40  E-value=0.00089  Score=28.85  Aligned_cols=22  Identities=32%  Similarity=0.643  Sum_probs=18.9

Q ss_pred             CcccccccccccCchhHHHhhh
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      ||+|..||+.+-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6889999999999999988864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.34  E-value=0.0013  Score=28.91  Aligned_cols=26  Identities=38%  Similarity=0.860  Sum_probs=16.9

Q ss_pred             ccccCc--CccccCChhHHHhHHhhhcC
Q psy16147        139 QFLCDQ--CDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       139 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  164 (227)
                      ||.|..  |.++|.+...|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455644  66777777777777666665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0019  Score=30.87  Aligned_cols=27  Identities=37%  Similarity=0.755  Sum_probs=19.2

Q ss_pred             CCcccc--CcCccccCChhHHHhHHhhhc
Q psy16147        137 EGQFLC--DQCDKVFAKHSSLARHKYEHS  163 (227)
Q Consensus       137 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~  163 (227)
                      ++||.|  +-|+..|.+.+.|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            567777  447777777777777776663

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0016  Score=32.76  Aligned_cols=26  Identities=35%  Similarity=0.751  Sum_probs=23.2

Q ss_pred             CccccCcCccccCChhHHHhHHhhhc
Q psy16147        138 GQFLCDQCDKVFAKHSSLARHKYEHS  163 (227)
Q Consensus       138 ~~~~C~~C~~~f~~~~~l~~H~~~h~  163 (227)
                      ..+.|..|++.|.....|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45789999999999999999998885

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.09  E-value=0.0012  Score=27.77  Aligned_cols=23  Identities=22%  Similarity=0.470  Sum_probs=21.2

Q ss_pred             cccCCcchhhhcChhHHHHHHHh
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      .|.|+.|=+.|+.+.++..|.++
T Consensus         1 vypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCchhhHHhccccCceEEEEE
Confidence            38899999999999999999875

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.0031  Score=27.31  Aligned_cols=22  Identities=41%  Similarity=0.768  Sum_probs=11.4

Q ss_pred             cCCCCCcccCCchhHHHHHhhc
Q psy16147        169 KCVECPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       169 ~C~~C~~~f~~~~~l~~H~~~h  190 (227)
                      +|+.|....++...|+.|.++|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4555555555555555555544

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.90  E-value=0.0027  Score=26.70  Aligned_cols=22  Identities=23%  Similarity=0.514  Sum_probs=18.3

Q ss_pred             cccCcCccccCChhHHHhHHhh
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYE  161 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~  161 (227)
                      |.|+.|-+.|...+++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788898889988888888764

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.0029  Score=34.17  Aligned_cols=37  Identities=16%  Similarity=0.336  Sum_probs=30.8

Q ss_pred             CCCCCCCCcccCCcchhhhcChhHHHHHHHhcccccc
Q psy16147         33 ADDNSGEGQFLCDQCDKVFAKHSSLARHKYEHSVLQK   69 (227)
Q Consensus        33 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   69 (227)
                      ....++...|+|..|+..|.+...|..|+..|+.+-+
T Consensus        10 ~~~~~~s~~yQC~HCd~K~~s~~el~~hl~~hneefq   46 (75)
T d1x6fa1          10 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ   46 (75)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCceeeechhHHHHhhHHHHHHHHHhccHHHH
Confidence            3344556779999999999999999999999987643

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0023  Score=27.61  Aligned_cols=24  Identities=17%  Similarity=0.479  Sum_probs=16.3

Q ss_pred             cccccccccccCchhHHHhhhccc
Q psy16147        196 FQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       196 ~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      |+|+.|+-.-.++++|+.|++.-|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            567777777777777777776444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.61  E-value=0.0027  Score=27.27  Aligned_cols=23  Identities=26%  Similarity=0.680  Sum_probs=20.7

Q ss_pred             cccCCcchhhhcChhHHHHHHHh
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      ||+|..||+.+-.+.+|..|-..
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999999654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.0049  Score=28.36  Aligned_cols=25  Identities=28%  Similarity=0.643  Sum_probs=16.7

Q ss_pred             CcccccccccccCchhHHHhhhccc
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMNHRY  219 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~~~h  219 (227)
                      .|.|..|+++|.++..+.+|.....
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            3667777777777777777765443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0042  Score=26.76  Aligned_cols=23  Identities=39%  Similarity=0.775  Sum_probs=21.2

Q ss_pred             cccCCcchhhhcChhHHHHHHHh
Q psy16147         41 QFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        41 ~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      -|+|+.|+-....++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            38999999999999999999985

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.002  Score=35.93  Aligned_cols=29  Identities=28%  Similarity=0.508  Sum_probs=25.5

Q ss_pred             CCCCCCcccCCcchhhhcChhHHHHHHHh
Q psy16147         35 DNSGEGQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      +.+|...|-|-.|++.|.+...|..|+++
T Consensus         9 D~pG~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1           9 DLPGGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCCCEEecccccCccCCHHHHHHHHcc
Confidence            44567889999999999999999999875

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.79  E-value=0.017  Score=26.21  Aligned_cols=24  Identities=29%  Similarity=0.663  Sum_probs=20.1

Q ss_pred             CCccccCcCccccCChhHHHhHHh
Q psy16147        137 EGQFLCDQCDKVFAKHSSLARHKY  160 (227)
Q Consensus       137 ~~~~~C~~C~~~f~~~~~l~~H~~  160 (227)
                      +..|.|+-||.+|.+.+.|..|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            346889999999999999998865

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.019  Score=25.05  Aligned_cols=26  Identities=19%  Similarity=0.492  Sum_probs=20.4

Q ss_pred             ccccCcCccccCChhHHHhHHhhhcC
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHSG  164 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~~  164 (227)
                      .|.|..||+...+...+..|+...+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            37788999998888888888765543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.0047  Score=28.80  Aligned_cols=24  Identities=21%  Similarity=0.254  Sum_probs=19.3

Q ss_pred             CCcchhhhcChhHHHHHHHhcccc
Q psy16147         44 CDQCDKVFAKHSSLARHKYEHSVL   67 (227)
Q Consensus        44 C~~C~~~f~~~~~L~~H~~~h~~~   67 (227)
                      |.-=++.|.....|..|+|+|++|
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            334457899999999999999864

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.74  E-value=0.017  Score=28.83  Aligned_cols=28  Identities=25%  Similarity=0.356  Sum_probs=24.9

Q ss_pred             CCCCCcccCCcchhhhcChhHHHHHHHh
Q psy16147         36 NSGEGQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      ...+.|-.|.+|+.......||+.|+..
T Consensus        19 s~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          19 SQSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            3457889999999999999999999986

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.016  Score=26.56  Aligned_cols=25  Identities=32%  Similarity=0.848  Sum_probs=16.7

Q ss_pred             ccccCcCccccCChhHHHhHHhhhc
Q psy16147        139 QFLCDQCDKVFAKHSSLARHKYEHS  163 (227)
Q Consensus       139 ~~~C~~C~~~f~~~~~l~~H~~~h~  163 (227)
                      .|+|..||+.|.....+.+|.-.-.
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            4677777777777777777654433

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.29  E-value=0.013  Score=27.23  Aligned_cols=24  Identities=25%  Similarity=0.454  Sum_probs=18.6

Q ss_pred             cCcCccccCChhHHHhHHhhhcCC
Q psy16147        142 CDQCDKVFAKHSSLARHKYEHSGQ  165 (227)
Q Consensus       142 C~~C~~~f~~~~~l~~H~~~h~~~  165 (227)
                      |+.=++.|.....|..|++.|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            555567788888888888888874

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.0074  Score=33.50  Aligned_cols=25  Identities=20%  Similarity=0.493  Sum_probs=20.6

Q ss_pred             CCcccccccccccCchhHHHhhhcc
Q psy16147        194 KPFQCCKCLKRFSHSGSYSQHMNHR  218 (227)
Q Consensus       194 ~~~~C~~C~~~f~~~~~l~~H~~~~  218 (227)
                      ..|-|..|++.|.+...|..|.++.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CEEecccccCccCCHHHHHHHHccc
Confidence            3478999999999999999888765

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.014  Score=25.28  Aligned_cols=18  Identities=33%  Similarity=0.744  Sum_probs=17.2

Q ss_pred             chhhhcChhHHHHHHHhc
Q psy16147         47 CDKVFAKHSSLARHKYEH   64 (227)
Q Consensus        47 C~~~f~~~~~L~~H~~~h   64 (227)
                      |++.|...+.++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            999999999999999887

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.51  E-value=0.021  Score=25.91  Aligned_cols=22  Identities=27%  Similarity=0.529  Sum_probs=18.6

Q ss_pred             CcccccccccccCchhHHHhhh
Q psy16147        195 PFQCCKCLKRFSHSGSYSQHMN  216 (227)
Q Consensus       195 ~~~C~~C~~~f~~~~~l~~H~~  216 (227)
                      .|.|.-||-.|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4888889999999888888875

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.13  E-value=0.026  Score=25.06  Aligned_cols=18  Identities=28%  Similarity=0.567  Sum_probs=6.6

Q ss_pred             CCcccCCchhHHHHHhhc
Q psy16147        173 CPKAFKHKHHLTEHKRLH  190 (227)
Q Consensus       173 C~~~f~~~~~l~~H~~~h  190 (227)
                      |+..|.....|..|+..|
T Consensus        11 C~A~ynk~wkL~AHLckH   28 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKH   28 (31)
T ss_dssp             GCCEESSHHHHHHHHHHH
T ss_pred             cchhhccchhhhHHhhhh
Confidence            333333333333333333

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.72  E-value=0.12  Score=25.63  Aligned_cols=29  Identities=24%  Similarity=0.338  Sum_probs=21.8

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhc
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHS  163 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  163 (227)
                      ..+.+..|++|+.......+|.+|+..-+
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            34567788888888888888888875443

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.44  E-value=0.04  Score=23.98  Aligned_cols=23  Identities=30%  Similarity=0.754  Sum_probs=19.5

Q ss_pred             cccCCc--chhhhcChhHHHHHHHh
Q psy16147         41 QFLCDQ--CDKVFAKHSSLARHKYE   63 (227)
Q Consensus        41 ~~~C~~--C~~~f~~~~~L~~H~~~   63 (227)
                      .|.|+.  |+-.|.++++++.|...
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhh
Confidence            467765  99999999999999765

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.99  E-value=0.024  Score=26.10  Aligned_cols=29  Identities=21%  Similarity=0.626  Sum_probs=21.0

Q ss_pred             CCCCcccccccccccCchhHHHhhhcccc
Q psy16147        192 GEKPFQCCKCLKRFSHSGSYSQHMNHRYS  220 (227)
Q Consensus       192 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  220 (227)
                      ++..|.|.+|.+.+...+++-+|.-+.|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            44567888888888888888887765543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.89  E-value=0.043  Score=29.76  Aligned_cols=40  Identities=15%  Similarity=0.417  Sum_probs=28.2

Q ss_pred             CCCCccccCcCccccCChhHHHhHHhhhcCCCCccCCCCCccc
Q psy16147        135 SGEGQFLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAF  177 (227)
Q Consensus       135 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  177 (227)
                      .....|+||.|++.|.....++-   .......|.|..|+...
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCBC
T ss_pred             ccCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCEE
Confidence            34467999999999988766543   23344678999988654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.34  E-value=0.029  Score=25.78  Aligned_cols=26  Identities=31%  Similarity=0.736  Sum_probs=22.8

Q ss_pred             CCCcccCCcchhhhcChhHHHHHHHh
Q psy16147         38 GEGQFLCDQCDKVFAKHSSLARHKYE   63 (227)
Q Consensus        38 ~~~~~~C~~C~~~f~~~~~L~~H~~~   63 (227)
                      |+..|.|.+|.+.++..+|+-.|-.+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            45679999999999999999999664

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.76  E-value=0.062  Score=25.79  Aligned_cols=11  Identities=18%  Similarity=0.718  Sum_probs=6.5

Q ss_pred             CccccCcCccc
Q psy16147        138 GQFLCDQCDKV  148 (227)
Q Consensus       138 ~~~~C~~C~~~  148 (227)
                      ..|+|++||..
T Consensus         4 ~~~~C~vCG~i   14 (37)
T d1nnqa2           4 KVYICPICGYT   14 (37)
T ss_dssp             CEEECTTTCCE
T ss_pred             cEEECCCCCCE
Confidence            34666666665

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.61  E-value=0.073  Score=25.33  Aligned_cols=11  Identities=27%  Similarity=0.658  Sum_probs=6.7

Q ss_pred             CccccCcCccc
Q psy16147        138 GQFLCDQCDKV  148 (227)
Q Consensus       138 ~~~~C~~C~~~  148 (227)
                      ..|+|++||..
T Consensus         4 ~~~vC~vCGyi   14 (36)
T d1yuza2           4 KFHLCPICGYI   14 (36)
T ss_dssp             CEEECSSSCCE
T ss_pred             CEEECCCCCCE
Confidence            44666666664

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.40  E-value=0.13  Score=21.77  Aligned_cols=20  Identities=40%  Similarity=0.906  Sum_probs=14.1

Q ss_pred             cCccccCChhHHHhHHhhhc
Q psy16147        144 QCDKVFAKHSSLARHKYEHS  163 (227)
Q Consensus       144 ~C~~~f~~~~~l~~H~~~h~  163 (227)
                      -|+++|....+|..|+-+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            37777777777777766654

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=84.04  E-value=0.19  Score=23.99  Aligned_cols=31  Identities=3%  Similarity=-0.111  Sum_probs=16.4

Q ss_pred             cccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccC
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFK  178 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  178 (227)
                      +.|+.||..|..        ........-.|+.|+..+.
T Consensus         3 ~vc~~cG~~Yh~--------~~~pPk~~g~CD~cg~~L~   33 (37)
T d2ak3a2           3 WIHPGSGRVYNI--------EFNPPKTMGIDDLTGEPLV   33 (37)
T ss_dssp             EEETTTTEEEET--------TTBCCSSTTBCTTTCCBCB
T ss_pred             eeeCCcCChhhh--------ccCCccccCCccCCCCcCE
Confidence            456667666533        2233344456666665443

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.45  E-value=0.41  Score=22.93  Aligned_cols=31  Identities=10%  Similarity=0.044  Sum_probs=15.4

Q ss_pred             cccCcCccccCChhHHHhHHhhhcCCCCccCCCCCcccC
Q psy16147        140 FLCDQCDKVFAKHSSLARHKYEHSGQRPYKCVECPKAFK  178 (227)
Q Consensus       140 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  178 (227)
                      ..|+.||..|...        .......-.|+.|+..+.
T Consensus         3 r~C~~cG~~Yh~~--------~~ppk~~g~CD~cg~~L~   33 (38)
T d1akya2           3 LIHPASGRSYHKI--------FNPPKEDMKDDVTGEALV   33 (38)
T ss_dssp             EECTTTCCEEETT--------TBCCSSTTBCTTTCCBCB
T ss_pred             cCCcCccchhhhh--------ccCcCcCCccCCCCCEee
Confidence            3566666665332        222333446666665443