Psyllid ID: psy16296


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70
MFELGRELYARFSYGYELLIFLVALPMNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL
ccHHHHHHHHHHHHHHHHHHHcccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccHHcccc
ccccccEHHHHHHcccEEEEEEcccccccccccccccEEEccHHHHHHHHHHHccHHHHHccccccEccc
MFELGRELYARFSYGYELLIFLVALpmnqkhlknqHVRVYKGSIDCMLQTIKHEGFMALYkgfiptwfil
MFELGRELYARFSYGYELLIFLVALPMNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL
MFELGRELYARFSYGYELLIFLVALPMNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL
****GRELYARFSYGYELLIFLVALPMNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFI*
*FELGRELYARFSYGYELLIFLVALPMNQKHL*******Y**SIDCMLQTIKHEGFMALYKGFIPTWFIL
MFELGRELYARFSYGYELLIFLVALPMNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL
*FELGRELYARFSYGYELLIFLVALPMNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
oooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MFELGRELYARFSYGYELLIFLVALPMNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query70 2.2.26 [Sep-21-2011]
Q5PQM9291 Kidney mitochondrial carr yes N/A 0.628 0.151 0.568 4e-09
Q5XGI1291 Kidney mitochondrial carr yes N/A 0.628 0.151 0.568 5e-09
Q9CR58291 Kidney mitochondrial carr yes N/A 0.628 0.151 0.568 6e-09
Q6GQ22291 Kidney mitochondrial carr N/A N/A 0.628 0.151 0.545 1e-08
Q5SVS4291 Kidney mitochondrial carr yes N/A 0.628 0.151 0.545 4e-08
Q8HXE3291 Kidney mitochondrial carr N/A N/A 0.628 0.151 0.545 6e-08
O95847323 Mitochondrial uncoupling no N/A 0.6 0.130 0.5 4e-07
O95258325 Brain mitochondrial carri no N/A 0.614 0.132 0.545 1e-06
Q9Z2B2325 Brain mitochondrial carri no N/A 0.614 0.132 0.545 2e-06
Q9SB52313 Mitochondrial uncoupling yes N/A 0.9 0.201 0.380 3e-06
>sp|Q5PQM9|KMCP1_RAT Kidney mitochondrial carrier protein 1 OS=Rattus norvegicus GN=Slc25a30 PE=2 SV=1 Back     alignment and function desciption
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 27  MNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL 70
           MNQ+ L++     YKG++DC+LQT K+EGF ALYKGF P W  L
Sbjct: 229 MNQRDLRDGRCSGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRL 272




Probable transporter.
Rattus norvegicus (taxid: 10116)
>sp|Q5XGI1|KMCP1_XENTR Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1 Back     alignment and function description
>sp|Q9CR58|KMCP1_MOUSE Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1 Back     alignment and function description
>sp|Q6GQ22|KMCP1_XENLA Kidney mitochondrial carrier protein 1 OS=Xenopus laevis GN=slc25a30 PE=2 SV=1 Back     alignment and function description
>sp|Q5SVS4|KMCP1_HUMAN Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1 Back     alignment and function description
>sp|Q8HXE3|KMCP1_MACFA Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1 Back     alignment and function description
>sp|O95847|UCP4_HUMAN Mitochondrial uncoupling protein 4 OS=Homo sapiens GN=SLC25A27 PE=1 SV=1 Back     alignment and function description
>sp|O95258|UCP5_HUMAN Brain mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A14 PE=2 SV=1 Back     alignment and function description
>sp|Q9Z2B2|UCP5_MOUSE Brain mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a14 PE=2 SV=2 Back     alignment and function description
>sp|Q9SB52|PUMP4_ARATH Mitochondrial uncoupling protein 4 OS=Arabidopsis thaliana GN=PUMP4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query70
357621576 300 hypothetical protein KGM_15948 [Danaus p 0.6 0.14 0.565 4e-10
332028458 295 Kidney mitochondrial carrier protein 1 [ 0.6 0.142 0.608 2e-08
66509425 299 PREDICTED: kidney mitochondrial carrier 0.6 0.140 0.543 2e-07
61557225 291 kidney mitochondrial carrier protein 1 [ 0.628 0.151 0.568 2e-07
380025677 298 PREDICTED: kidney mitochondrial carrier 0.6 0.140 0.543 2e-07
38969885 315 slc25a30 protein [Xenopus (Silurana) tro 0.628 0.139 0.568 2e-07
307208996 298 Kidney mitochondrial carrier protein 1 [ 0.428 0.100 0.733 2e-07
288562690 291 kidney mitochondrial carrier protein 1 [ 0.628 0.151 0.568 2e-07
350417339 311 PREDICTED: kidney mitochondrial carrier 0.6 0.135 0.543 2e-07
345323175 300 PREDICTED: mitochondrial uncoupling prot 0.585 0.136 0.609 2e-07
>gi|357621576|gb|EHJ73368.1| hypothetical protein KGM_15948 [Danaus plexippus] Back     alignment and taxonomy information
 Score = 68.6 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 38/46 (82%), Gaps = 4/46 (8%)

Query: 27  MNQKHLKN----QHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWF 68
           MNQ+ +KN      V++YKG++DC++QTI++EGF+ALYKGF+PTW 
Sbjct: 235 MNQRKVKNDSSYSQVKIYKGTVDCLVQTIRNEGFLALYKGFVPTWL 280




Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028458|gb|EGI68501.1| Kidney mitochondrial carrier protein 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|66509425|ref|XP_397152.2| PREDICTED: kidney mitochondrial carrier protein 1-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|61557225|ref|NP_001013205.1| kidney mitochondrial carrier protein 1 [Rattus norvegicus] gi|81889303|sp|Q5PQM9.1|KMCP1_RAT RecName: Full=Kidney mitochondrial carrier protein 1; AltName: Full=Solute carrier family 25 member 30 gi|56269824|gb|AAH87106.1| Solute carrier family 25, member 30 [Rattus norvegicus] Back     alignment and taxonomy information
>gi|380025677|ref|XP_003696595.1| PREDICTED: kidney mitochondrial carrier protein 1-like [Apis florea] Back     alignment and taxonomy information
>gi|38969885|gb|AAH63207.1| slc25a30 protein [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|307208996|gb|EFN86196.1| Kidney mitochondrial carrier protein 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|288562690|ref|NP_001165746.1| kidney mitochondrial carrier protein 1 [Xenopus (Silurana) tropicalis] gi|82197322|sp|Q5XGI1.1|KMCP1_XENTR RecName: Full=Kidney mitochondrial carrier protein 1; AltName: Full=Solute carrier family 25 member 30 gi|54038219|gb|AAH84458.1| Unknown (protein for MGC:89262) [Xenopus (Silurana) tropicalis] gi|89271337|emb|CAJ82748.1| solute carrier family 25, member 30 [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|350417339|ref|XP_003491374.1| PREDICTED: kidney mitochondrial carrier protein 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|345323175|ref|XP_001511667.2| PREDICTED: mitochondrial uncoupling protein 4-like [Ornithorhynchus anatinus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query70
RGD|1359702291 Slc25a30 "solute carrier famil 0.628 0.151 0.568 7.1e-09
UNIPROTKB|Q5PQM9291 Slc25a30 "Kidney mitochondrial 0.628 0.151 0.568 7.1e-09
MGI|MGI:1914804291 Slc25a30 "solute carrier famil 0.628 0.151 0.568 9.1e-09
UNIPROTKB|I3LEG3292 SLC25A30 "Uncharacterized prot 0.628 0.150 0.568 9.2e-09
UNIPROTKB|F1N2U7291 SLC25A30 "Uncharacterized prot 0.628 0.151 0.568 2e-08
UNIPROTKB|F5H8H8240 SLC25A30 "Kidney mitochondrial 0.628 0.183 0.545 3.1e-08
WB|WBGene00006729324 ucp-4 [Caenorhabditis elegans 0.614 0.132 0.511 4.2e-08
UNIPROTKB|F1PLS7291 SLC25A30 "Uncharacterized prot 0.628 0.151 0.545 5.5e-08
UNIPROTKB|Q5SVS4291 SLC25A30 "Kidney mitochondrial 0.628 0.151 0.545 5.5e-08
ZFIN|ZDB-GENE-040426-1290315 slc25a27 "solute carrier famil 0.6 0.133 0.5 6.6e-08
RGD|1359702 Slc25a30 "solute carrier family 25, member 30" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
 Score = 137 (53.3 bits), Expect = 7.1e-09, P = 7.1e-09
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query:    27 MNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL 70
             MNQ+ L++     YKG++DC+LQT K+EGF ALYKGF P W  L
Sbjct:   229 MNQRDLRDGRCSGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRL 272




GO:0005739 "mitochondrion" evidence=ISO
GO:0005743 "mitochondrial inner membrane" evidence=IEA
GO:0006839 "mitochondrial transport" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
UNIPROTKB|Q5PQM9 Slc25a30 "Kidney mitochondrial carrier protein 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1914804 Slc25a30 "solute carrier family 25, member 30" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|I3LEG3 SLC25A30 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1N2U7 SLC25A30 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F5H8H8 SLC25A30 "Kidney mitochondrial carrier protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
WB|WBGene00006729 ucp-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1PLS7 SLC25A30 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5SVS4 SLC25A30 "Kidney mitochondrial carrier protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1290 slc25a27 "solute carrier family 25, member 27" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P32332OAC1_YEASTNo assigned EC number0.51420.50.1080yesN/A
Q5PQM9KMCP1_RATNo assigned EC number0.56810.62850.1512yesN/A
Q9CR58KMCP1_MOUSENo assigned EC number0.56810.62850.1512yesN/A
Q5XGI1KMCP1_XENTRNo assigned EC number0.56810.62850.1512yesN/A
Q5SVS4KMCP1_HUMANNo assigned EC number0.54540.62850.1512yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query70
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-07
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 43.8 bits (104), Expect = 2e-07
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 38 RVYKGSIDCMLQTIKHEGFMALYKGFIPTWF 68
          R YKG +DC  +  K EG   LYKG +P   
Sbjct: 42 RKYKGILDCFKKIYKEEGIRGLYKGLLPNLL 72


Length = 96

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 70
KOG0753|consensus317 99.37
KOG0753|consensus 317 99.25
KOG0752|consensus 320 99.22
KOG0759|consensus286 99.16
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.08
KOG0758|consensus 297 99.07
KOG0754|consensus 294 99.06
KOG0752|consensus320 99.01
KOG0764|consensus 299 98.99
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 98.97
KOG0750|consensus304 98.94
KOG0764|consensus299 98.9
KOG0762|consensus 311 98.9
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 98.89
KOG0754|consensus294 98.89
KOG0768|consensus323 98.89
KOG0758|consensus297 98.88
KOG0757|consensus 319 98.87
KOG0756|consensus299 98.87
KOG0767|consensus 333 98.85
KOG0751|consensus694 98.85
KOG0749|consensus298 98.84
PTZ00168259 mitochondrial carrier protein; Provisional 98.82
KOG0751|consensus 694 98.81
KOG0762|consensus311 98.8
KOG0757|consensus319 98.71
KOG0759|consensus 286 98.68
PTZ00168 259 mitochondrial carrier protein; Provisional 98.65
KOG0755|consensus320 98.63
KOG0760|consensus 302 98.58
KOG0768|consensus 323 98.52
KOG0766|consensus297 98.51
KOG0749|consensus 298 98.5
KOG0769|consensus 308 98.42
KOG0761|consensus361 98.4
KOG0760|consensus302 98.38
KOG0765|consensus 333 98.28
KOG0767|consensus 333 98.27
KOG0765|consensus 333 98.26
KOG0766|consensus 297 98.26
KOG0763|consensus 301 98.26
KOG0750|consensus 304 98.11
KOG0036|consensus 463 98.1
KOG0763|consensus301 98.07
KOG0755|consensus 320 98.04
KOG2745|consensus 321 97.98
KOG2954|consensus427 97.92
KOG0756|consensus 299 97.91
KOG0769|consensus308 97.89
KOG0770|consensus 353 97.83
KOG0761|consensus 361 97.77
KOG0036|consensus 463 97.69
KOG0770|consensus 353 97.59
KOG1519|consensus 297 94.49
KOG2745|consensus 321 93.54
KOG1519|consensus 297 86.3
>KOG0753|consensus Back     alignment and domain information
Probab=99.37  E-value=5.9e-13  Score=80.69  Aligned_cols=65  Identities=37%  Similarity=0.802  Sum_probs=49.5

Q ss_pred             hhHHHHHHHhhhHHHHHHHhHhhcccchhcc-----ccccccCcHHHHHHHHHHHhchhccccccchhhhcC
Q psy16296          4 LGRELYARFSYGYELLIFLVALPMNQKHLKN-----QHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWFIL   70 (70)
Q Consensus         4 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~eG~~gl~rG~~~~~~r~   70 (70)
                      +..|+.+++.+|+.+  .++++|.+..+...     ++...|+++.||+.+++++||+.+||||+.|+++|.
T Consensus       225 ~~~HfvSs~~AGl~a--ai~s~P~DVVKTRmMNqp~g~~~~Ykgs~DC~~k~v~~EG~~AlYKGF~Psw~Rl  294 (317)
T KOG0753|consen  225 IPTHFVSSFCAGLAA--AILSSPVDVVKTRMMNQPPGRGGLYKGSLDCLIKTVKNEGFFALYKGFIPSWLRL  294 (317)
T ss_pred             hHHHHHHHHHHHHHH--HHhcCcHHHHHhhhccCCCCcCccccchHHHHHHHHHhcChHHHHccccccceec
Confidence            456788888888877  55444443333211     334679999999999999999999999999999984



>KOG0753|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query70
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-13
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-05
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-04
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-08
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-07
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score = 60.4 bits (147), Expect = 5e-13
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 34  NQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWF 68
           N  +  Y  +  C L  ++ EG  A YKGF+P++ 
Sbjct: 232 NSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFL 266


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query70
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.15
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.13
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 98.97
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=99.15  E-value=4.9e-11  Score=71.31  Aligned_cols=32  Identities=31%  Similarity=0.554  Sum_probs=30.1

Q ss_pred             cccCcHHHHHHHHHHHhchhccccccchhhhc
Q psy16296         38 RVYKGSIDCMLQTIKHEGFMALYKGFIPTWFI   69 (70)
Q Consensus        38 ~~~~~~~~~~~~i~~~eG~~gl~rG~~~~~~r   69 (70)
                      ..|++.++|+++|+++||++|||||+.|+++|
T Consensus       248 ~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r  279 (297)
T 1okc_A          248 IMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR  279 (297)
T ss_dssp             CSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHcCcCeEecchHHHHHh
Confidence            36899999999999999999999999999987



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 70
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-06
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 39.7 bits (91), Expect = 5e-06
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 27  MNQKHLKNQHVRVYKGSIDCMLQTIKHEGFMALYKGFIPTWF 68
           M  +  +     +Y G++DC  +  K EG  A +KG      
Sbjct: 236 MMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVL 277


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query70
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.07
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 98.94
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.07  E-value=1.2e-10  Score=67.52  Aligned_cols=32  Identities=31%  Similarity=0.554  Sum_probs=29.9

Q ss_pred             cccCcHHHHHHHHHHHhchhccccccchhhhc
Q psy16296         38 RVYKGSIDCMLQTIKHEGFMALYKGFIPTWFI   69 (70)
Q Consensus        38 ~~~~~~~~~~~~i~~~eG~~gl~rG~~~~~~r   69 (70)
                      ..|+++++|+++++++||+++||||+.|+++|
T Consensus       247 ~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r  278 (292)
T d1okca_         247 IMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR  278 (292)
T ss_dssp             CSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhcCcCcccccHHHHHHH
Confidence            46889999999999999999999999999887



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure