Psyllid ID: psy16400

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-----
Protein Sequence
MKIPALNSLSGFAFFFPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLSTNQTPVAAAER
Secondary Structure (PSIPRED)
ccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHcHHHHHHEccccccEcEHHccccEEEcccccccccccccccccccccccccEEEEcHHHHHHEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHcccccccccccccHHHccc
Coil and Loop (DISEMBL)
mkipalnslsgfafffpRGVFTAALSTLARFhwlnwdpnpkyvrttqenqyscqhcgkryrwkstlkrhevfecggkepvhqcphcdyrakqsgnlrvHIRKYHTsielqspspaprkpivnpmqtqqqasnlstnqtpvaaaer
Flexible Loop (DISEMBL)
mkipalnslsgFAFFFPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFEcggkepvhqcPHCDYRAKQSGNLRVHIRKYHTsielqspspaprKPIVNPMQTQqqasnlstnqtpvaaaer
Low Complexity Region (SEG)
MKIPALNSLSGFAFFFPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLSTNQTPVAAAER
Disordered region (IsUnstruct)
******NSLSGFAFFFPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT****************************************
Disordered Region (DISOPRED)
*K************FFPRGVFTAALSTLARF***************QENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPR*****************TNQTPVA****
Disordered Region (DISEMBL)
MKIPALNSLSGFAFFFPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVN***********************
Disordered Region (DISPRO)
*KIPALNSLSGFAFFFPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT****************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKIPALNSLSGFAFFFPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLSTNQTPVAAAER
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	145	2.2.26 [Sep-21-2011]
P42283	891	Longitudinals lacking pro	yes	N/A	0.565	0.092	0.566	2e-22
Q867Z4	970	Longitudinals lacking pro	no	N/A	0.393	0.058	0.701	1e-21
Q7KQZ4	787	Longitudinals lacking pro	no	N/A	0.365	0.067	0.462	9e-09
Q7TSH3	1157	Zinc finger protein 516 O	yes	N/A	0.641	0.080	0.305	1e-07
Q92618	1163	Zinc finger protein 516 O	yes	N/A	0.524	0.065	0.333	3e-07
Q8K083	1302	Zinc finger protein 536 O	no	N/A	0.358	0.039	0.444	3e-07
O15090	1300	Zinc finger protein 536 O	no	N/A	0.358	0.04	0.444	3e-07
Q9JKY3	522	Zinc finger protein 238 O	no	N/A	0.579	0.160	0.340	4e-07
Q801P1	520	Zinc finger protein 238 O	N/A	N/A	0.4	0.111	0.4	4e-07
Q99592	522	Zinc finger protein 238 O	no	N/A	0.579	0.160	0.340	4e-07

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score =  104 bits (259), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 40  PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVH 99
           P  +    E  Y C+HCGK+YRWKSTL+RHE  ECGGKEP HQCP+C Y++KQ GNL VH
Sbjct: 780 PNGIGLDGEPVYECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVH 839

Query: 100 IRKYHTSIELQSPSPAPRKPIVN 122
           +RK+HT +  Q PS    K  +N
Sbjct: 840 VRKHHTDLP-QLPSKRRSKYSMN 861

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.
Drosophila melanogaster (taxid: 7227)

>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score =  102 bits (253), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/57 (70%), Positives = 49/57 (85%)

Query: 48  ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH 104
           E++Y C+HCGK+YRWKSTL+RHE  ECGGKEP H CP+C Y+AKQ GNL VH+RK+H
Sbjct: 900 ESRYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVRKHH 956

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 51  YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH 104
           + C  CG+ Y+ KS+L+ H+ +ECG KEP  QCP C YRAKQ  ++  H+ + H
Sbjct: 685 HPCPVCGRVYKLKSSLRNHQKWECG-KEPQFQCPFCVYRAKQKMHIGRHMERMH 737

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q7TSH3|ZN516_MOUSE Zinc finger protein 516 OS=Mus musculus GN=Znf516 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 51  YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQ 110
           +SC  CGK + ++S+L +H     G  E  ++CP+CD+RA Q GNL++HIR + T   +Q
Sbjct: 34  HSCCICGKSFPFQSSLSQHMRKHTG--EKPYKCPYCDHRASQKGNLKIHIRSHRTGTLIQ 91

Query: 111 SPSPAPRKPIVNPMQTQQQASNLSTNQTPVAAAER 145
              P   +  +  M+  +     ++     +A  R
Sbjct: 92  GHEPEAGEAQLGEMRVSEGLDGCASPTKSTSACNR 126

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q92618|ZN516_HUMAN Zinc finger protein 516 OS=Homo sapiens GN=ZNF516 PE=2 SV=1

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 51  YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQ 110
           ++C  CGK + ++S+L +H     G  E  ++CP+CD+RA Q GNL++HIR + T   +Q
Sbjct: 34  HTCCICGKSFPFQSSLSQHMRKHTG--EKPYKCPYCDHRASQKGNLKIHIRSHRTGTLIQ 91

Query: 111 SPSPAPRKPIVNPMQTQQ 128
              P   +  +  M+  +
Sbjct: 92  GHEPEAGEAPLGEMRASE 109

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8K083|ZN536_MOUSE Zinc finger protein 536 OS=Mus musculus GN=Znf536 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 50  QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY 103
           +Y C  CGKR+R+ S L  H     G  E   +CP+CD+RA Q GNL++H+R +
Sbjct: 129 KYPCPLCGKRFRFNSILSLHMRTHTG--EKPFKCPYCDHRAAQKGNLKIHLRTH 180

May be involved in transcriptional regulation. Recognizes and binds 2 copies of the core DNA sequence 5'-CCCCCA-3'.

Mus musculus (taxid: 10090)

>sp|O15090|ZN536_HUMAN Zinc finger protein 536 OS=Homo sapiens GN=ZNF536 PE=1 SV=3

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 50  QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY 103
           +Y C  CGKR+R+ S L  H     G  E   +CP+CD+RA Q GNL++H+R +
Sbjct: 129 KYPCPLCGKRFRFNSILSLHMRTHTG--EKPFKCPYCDHRAAQKGNLKIHLRTH 180

May be involved in transcriptional regulation. Recognizes and binds 2 copies of the core DNA sequence 5'-CCCCCA-3'.

Homo sapiens (taxid: 9606)

>sp|Q9JKY3|ZN238_RAT Zinc finger protein 238 OS=Rattus norvegicus GN=Znf238 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 48  ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI 107
           E  Y+C  CGK +++   L RH V     +E  H C  C+ R  QSG+L  HIRK+H  +
Sbjct: 435 EKPYTCTQCGKSFQYSHNLSRHAVVHT--REKPHACKWCERRFTQSGDLYRHIRKFHCEL 492

Query: 108 --ELQSPSPAPRKPIVNPMQTQQQASNL 133
              L   S A   P V     +  +  L
Sbjct: 493 VNSLSVKSEALSLPTVRDWTLEDSSQEL 520

Transcriptional repressor that plays a role in various developmental processes such as myogenesis and brain development. Specifically binds the consensus DNA sequence 5'-[AC]ACATCTG[GT][AC]-3' which contains the E box core, and acts by recruiting chromatin remodeling multiprotein complexes. Plays a key role in myogenesis by directly repressing the expression of ID2 and ID3, 2 inhibitors of skeletal myogenesis. Also involved in controlling cell division of progenitor cells and regulating the survival of postmitotic cortical neurons. May also play a role in the organization of chromosomes in the nucleus.

Rattus norvegicus (taxid: 10116)

>sp|Q801P1|Z2381_XENLA Zinc finger protein 238 OS=Xenopus laevis GN=znf238 PE=2 SV=2

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 48  ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI 107
           E  Y+C  CGK +++   L RH V     +E  H C  C+ R  QSG+L  HIRK+H  +
Sbjct: 433 EKPYTCTQCGKSFQYSHNLSRHAVVHT--REKPHACKWCERRFTQSGDLYRHIRKFHCEL 490

Transcriptional repressor that plays a role in various developmental processes. Specifically binds the consensus DNA sequence 5'-[AC]ACATCTG[GT][AC]-3' which contains the E box core, and acts by recruiting chromatin remodeling multiprotein complexes.

Xenopus laevis (taxid: 8355)

>sp|Q99592|ZN238_HUMAN Zinc finger protein 238 OS=Homo sapiens GN=ZNF238 PE=1 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 48  ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI 107
           E  Y+C  CGK +++   L RH V     +E  H C  C+ R  QSG+L  HIRK+H  +
Sbjct: 435 EKPYTCTQCGKSFQYSHNLSRHAVVHT--REKPHACKWCERRFTQSGDLYRHIRKFHCEL 492

Query: 108 --ELQSPSPAPRKPIVNPMQTQQQASNL 133
              L   S A   P V     +  +  L
Sbjct: 493 VNSLSVKSEALSLPTVRDWTLEDSSQEL 520

Transcriptional repressor that plays a role in various developmental processes such as myogenesis and brain development. Plays a key role in myogenesis by directly repressing the expression of ID2 and ID3, 2 inhibitors of skeletal myogenesis. Also involved in controlling cell division of progenitor cells and regulating the survival of postmitotic cortical neurons (By similarity). Specifically binds the consensus DNA sequence 5'-[AC]ACATCTG[GT][AC]-3' which contains the E box core, and acts by recruiting chromatin remodeling multiprotein complexes. May also play a role in the organization of chromosomes in the nucleus.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	145
328713780	430	PREDICTED: zinc finger protein 238-like	0.524	0.176	0.842	2e-34
170059857	792	lola [Culex quinquefasciatus] gi|1678784	0.393	0.071	0.724	4e-21
312374697	846	hypothetical protein AND_15642 [Anophele	0.427	0.073	0.698	5e-21
195120836	466	GI20190 [Drosophila mojavensis] gi|19390	0.468	0.145	0.617	6e-21
158292857	911	AGAP005245-PA [Anopheles gambiae str. PE	0.4	0.063	0.724	8e-21
194757970	441	GF11104 [Drosophila ananassae] gi|190622	0.468	0.154	0.617	1e-20
195153467	433	GL17198 [Drosophila persimilis] gi|19411	0.475	0.159	0.608	1e-20
195425427	411	GK19013 [Drosophila willistoni] gi|19415	0.468	0.165	0.617	1e-20
198460549	433	GA25037 [Drosophila pseudoobscura pseudo	0.475	0.159	0.608	1e-20
467231	894	Lola protein long isoform [Drosophila me	0.565	0.091	0.566	1e-20

>gi|328713780|ref|XP_001942945.2| PREDICTED: zinc finger protein 238-like [Acyrthosiphon pisum]

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 64/76 (84%), Positives = 71/76 (93%)

Query: 33  WLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQ 92
           W N++ N KYVRTTQ N +SCQHCGKRYRWKSTLKRHEVFECGGKEPVH+CPHC+YRAKQ
Sbjct: 355 WKNFEQNSKYVRTTQANPFSCQHCGKRYRWKSTLKRHEVFECGGKEPVHRCPHCEYRAKQ 414

Query: 93  SGNLRVHIRKYHTSIE 108
           SGNLRVHIRKYHT++E
Sbjct: 415 SGNLRVHIRKYHTALE 430

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170059857|ref|XP_001865544.1| lola [Culex quinquefasciatus] gi|167878489|gb|EDS41872.1| lola [Culex quinquefasciatus]

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 50  QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI 107
           QY C+HCGKRYRWKSTL+RHE  ECGGKE +HQCP+C Y+AKQ GNL VHIRK+H+ +
Sbjct: 706 QYICRHCGKRYRWKSTLRRHENVECGGKEAMHQCPYCTYKAKQRGNLGVHIRKHHSEM 763

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374697|gb|EFR22195.1| hypothetical protein AND_15642 [Anopheles darlingi]

 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%)

Query: 50  QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI-E 108
           QY C+HCGKRYRWKSTL+RHE  ECGGKE  HQCP+C Y+AKQ GNL VHIRK+H  + +
Sbjct: 752 QYICRHCGKRYRWKSTLRRHENVECGGKEASHQCPYCTYKAKQRGNLGVHIRKHHAEMPQ 811

Query: 109 LQS 111
           L+S
Sbjct: 812 LES 814

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195120836|ref|XP_002004927.1| GI20190 [Drosophila mojavensis] gi|193909995|gb|EDW08862.1| GI20190 [Drosophila mojavensis]

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 52/68 (76%)

Query: 40  PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVH 99
           P  +    E  Y C+HCGK+YRWKSTL+RHE  ECGGKEP HQCP+C Y++KQ GNL VH
Sbjct: 350 PNGIGLDGEPVYECRHCGKKYRWKSTLRRHENVECGGKEPAHQCPYCPYKSKQRGNLGVH 409

Query: 100 IRKYHTSI 107
           +RK+HT +
Sbjct: 410 VRKHHTDL 417

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158292857|ref|XP_001688538.1| AGAP005245-PA [Anopheles gambiae str. PEST] gi|157017190|gb|EDO64121.1| AGAP005245-PA [Anopheles gambiae str. PEST]

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/58 (72%), Positives = 49/58 (84%)

Query: 50  QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI 107
           QY C+HCGKRYRWKSTL+RHE  ECGGKE  HQCP+C Y+AKQ GNL VHIRK+H+ +
Sbjct: 838 QYVCRHCGKRYRWKSTLRRHENVECGGKEASHQCPYCSYKAKQRGNLGVHIRKHHSEM 895

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194757970|ref|XP_001961235.1| GF11104 [Drosophila ananassae] gi|190622533|gb|EDV38057.1| GF11104 [Drosophila ananassae]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 52/68 (76%)

Query: 40  PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVH 99
           P  +    E  Y C+HCGK+YRWKSTL+RHE  ECGGKEP HQCP+C Y++KQ GNL VH
Sbjct: 336 PNGIGLDGEPVYECRHCGKKYRWKSTLRRHENVECGGKEPAHQCPYCPYKSKQRGNLGVH 395

Query: 100 IRKYHTSI 107
           +RK+HT +
Sbjct: 396 VRKHHTDL 403

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195153467|ref|XP_002017647.1| GL17198 [Drosophila persimilis] gi|194113443|gb|EDW35486.1| GL17198 [Drosophila persimilis]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 39  NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRV 98
           +P  +    E  Y C+HCGK+YRWKSTL+RHE  ECGGKEP HQCP+C Y++KQ GNL V
Sbjct: 329 SPNAIGLDGEPVYECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGV 388

Query: 99  HIRKYHTSI 107
           H+RK+HT +
Sbjct: 389 HVRKHHTDL 397

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195425427|ref|XP_002061009.1| GK19013 [Drosophila willistoni] gi|194157094|gb|EDW71995.1| GK19013 [Drosophila willistoni]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 52/68 (76%)

Query: 40  PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVH 99
           P  +    E  Y C+HCGK+YRWKSTL+RHE  ECGGKEP HQCP+C Y++KQ GNL VH
Sbjct: 294 PNGIGLDGEPVYECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVH 353

Query: 100 IRKYHTSI 107
           +RK+HT +
Sbjct: 354 VRKHHTDL 361

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198460549|ref|XP_002138855.1| GA25037 [Drosophila pseudoobscura pseudoobscura] gi|198137054|gb|EDY69413.1| GA25037 [Drosophila pseudoobscura pseudoobscura]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 39  NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRV 98
           +P  +    E  Y C+HCGK+YRWKSTL+RHE  ECGGKEP HQCP+C Y++KQ GNL V
Sbjct: 329 SPNAIGLDGEPVYECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGV 388

Query: 99  HIRKYHTSI 107
           H+RK+HT +
Sbjct: 389 HVRKHHTDL 397

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|467231|gb|AAA19593.1| Lola protein long isoform [Drosophila melanogaster] gi|29539427|dbj|BAC67596.1| Lola protein isoform T [Drosophila melanogaster] gi|29539467|dbj|BAC67616.1| Lola protein isoform T [Drosophila melanogaster] gi|29539507|dbj|BAC67636.1| Lola protein isoform T [Drosophila melanogaster] gi|29539547|dbj|BAC67656.1| Lola protein isoform T [Drosophila melanogaster]

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 40  PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVH 99
           P  +    E  Y C+HCGK+YRWKSTL+RHE  ECGGKEP HQCP+C Y++KQ GNL VH
Sbjct: 783 PNGIGLDGEPVYECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVH 842

Query: 100 IRKYHTSIELQSPSPAPRKPIVN 122
           +RK+HT +  Q PS    K  +N
Sbjct: 843 VRKHHTDLP-QLPSKRRSKYSMN 864

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	145
FB|FBgn0005630	970	lola "longitudinals lacking" [	0.393	0.058	0.701	1e-20
UNIPROTKB|H9KVD4	321	MECOM "MDS1 and EVI1 complex l	0.393	0.177	0.372	5.1e-10
UNIPROTKB|F1SNN5	1118	ZNF516 "Uncharacterized protei	0.427	0.055	0.406	1.4e-09
ZFIN|ZDB-GENE-070112-222	274	zgc:158517 "zgc:158517" [Danio	0.393	0.208	0.466	1.6e-09
ZFIN|ZDB-GENE-081031-35	242	si:ch73-92e7.6 "si:ch73-92e7.6	0.393	0.235	0.45	2.2e-09
MGI|MGI:2443957	1157	Zfp516 "zinc finger protein 51	0.641	0.080	0.305	3.4e-09
ZFIN|ZDB-GENE-080613-2	1200	prdm16 "PR domain containing 1	0.393	0.047	0.389	4.7e-09
ZFIN|ZDB-GENE-050208-626	256	si:dkey-15h8.15 "si:dkey-15h8.	0.668	0.378	0.323	4.7e-09
UNIPROTKB|E1BCA0	1108	ZNF516 "Uncharacterized protei	0.427	0.055	0.390	6.1e-09
ZFIN|ZDB-GENE-050913-148	315	zgc:113377 "zgc:113377" [Danio	0.475	0.219	0.388	6.7e-09

FB|FBgn0005630 lola "longitudinals lacking" [Drosophila melanogaster (taxid:7227)]

 Score = 256 (95.2 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 40/57 (70%), Positives = 49/57 (85%)

Query:    48 ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH 104
             E++Y C+HCGK+YRWKSTL+RHE  ECGGKEP H CP+C Y+AKQ GNL VH+RK+H
Sbjct:   900 ESRYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVRKHH 956

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0007411 "axon guidance" evidence=IGI;NAS;IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0007409 "axonogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0016199 "axon midline choice point recognition" evidence=IGI;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007464 "R3/R4 cell fate commitment" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|H9KVD4 MECOM "MDS1 and EVI1 complex locus protein MDS1" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
 Identities = 22/59 (37%), Positives = 31/59 (52%)

Query:    46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH 104
             T+E +Y C  C K + WKS L RH++    GK   ++C +C        NL+ HIR  H
Sbjct:    73 TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKH--YECENCAKVFTDPSNLQRHIRSQH 129

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1SNN5 ZNF516 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 145 (56.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 26/64 (40%), Positives = 44/64 (68%)

Query:    51 YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQ 110
             +SC  CGK + ++S+L +H + +  G++P ++CP+CD+RA Q GNL++HIR + T   +Q
Sbjct:    34 HSCCICGKSFPFQSSLSQH-MRKHTGEKP-YKCPYCDHRASQKGNLKIHIRSHRTGTLIQ 91

Query:   111 SPSP 114
                P
Sbjct:    92 GHEP 95

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-070112-222 zgc:158517 "zgc:158517" [Danio rerio (taxid:7955)]

 Score = 142 (55.0 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query:    46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
             T E  Y C HC KR+   S LK+HE+   G K P + C HCD R ++SG+L+ H  K HT
Sbjct:   188 TGEKPYKCSHCDKRFSQSSHLKKHEMIHTGEK-P-YTCSHCDKRFRRSGHLKTH-EKIHT 244

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-081031-35 si:ch73-92e7.6 "si:ch73-92e7.6" [Danio rerio (taxid:7955)]

 Score = 139 (54.0 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 27/60 (45%), Positives = 34/60 (56%)

Query:    46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
             T E  Y C HC KR+R+   LK+HE    G K P ++C HCD R   SG L+ H +  HT
Sbjct:    83 TGEKPYKCSHCDKRFRYSGQLKKHERIHTGEK-P-YKCSHCDKRFNDSGRLKTH-KMLHT 139

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:2443957 Zfp516 "zinc finger protein 516" [Mus musculus (taxid:10090)]

 Score = 149 (57.5 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 29/95 (30%), Positives = 54/95 (56%)

Query:    51 YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQ 110
             +SC  CGK + ++S+L +H + +  G++P ++CP+CD+RA Q GNL++HIR + T   +Q
Sbjct:    34 HSCCICGKSFPFQSSLSQH-MRKHTGEKP-YKCPYCDHRASQKGNLKIHIRSHRTGTLIQ 91

Query:   111 SPSPAPRKPIVNPMQTQQQASNLSTNQTPVAAAER 145
                P   +  +  M+  +     ++     +A  R
Sbjct:    92 GHEPEAGEAQLGEMRVSEGLDGCASPTKSTSACNR 126

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-080613-2 prdm16 "PR domain containing 16" [Danio rerio (taxid:7955)]

 Score = 124 (48.7 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:    46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH 104
             T+E +Y C  C K + WKS L RH++    GK    +C +CD       NL+ HIR  H
Sbjct:   304 TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKR--FECENCDKVFTDPSNLQRHIRSQH 360

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-050208-626 si:dkey-15h8.15 "si:dkey-15h8.15" [Danio rerio (taxid:7955)]

 Score = 137 (53.3 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 33/102 (32%), Positives = 48/102 (47%)

Query:    43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK 102
             ++ T    Y+C  CGK Y  K TLKRH +   G + P ++C HCD R    GNL+ H + 
Sbjct:    54 MKKTAVKCYTCTQCGKSYNLKETLKRHLIIHTG-ERP-YKCSHCDMRFNNRGNLKTH-KL 110

Query:   103 YHTSIELQSPSPAPRKPIVNPMQTQQQASNLSTNQTPVAAAE 144
              HT  E         K  + P + ++    L  N  P + +E
Sbjct:   111 IHTG-ERTHKCDQCGKTFLRPYELKKHL-RLHINGRPYSCSE 150

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E1BCA0 ZNF516 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 134 (52.2 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
 Identities = 25/64 (39%), Positives = 42/64 (65%)

Query:    51 YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQ 110
             +SC  CGK + ++S+L +H + +  G++P ++CP+CD+RA Q GNL++HIR +      Q
Sbjct:    34 HSCCICGKTFPFQSSLSQH-MRKHTGEKP-YKCPYCDHRAAQKGNLKIHIRGHRAGTLTQ 91

Query:   111 SPSP 114
                P
Sbjct:    92 GREP 95

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-050913-148 zgc:113377 "zgc:113377" [Danio rerio (taxid:7955)]

 Score = 138 (53.6 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 28/72 (38%), Positives = 40/72 (55%)

Query:    46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
             T E  Y+C HC KR+    +LK HE+   G K P ++C HC+ R  QSG+++ H R  HT
Sbjct:   225 TGEKPYTCSHCNKRFNQSGSLKTHEMIHTGEK-P-YKCSHCNKRFSQSGSMKAHER-IHT 281

Query:   106 SIELQSPSPAPR 117
               +  S    P+
Sbjct:   282 GEKPYSCDQCPK 293

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P42283	LOLA1_DROME	No assigned EC number	0.5662	0.5655	0.0920	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	145
KOG2462|consensus	279		99.82
KOG2462|consensus	279		99.73
KOG3623|consensus	1007		99.48
KOG3576|consensus	267		99.42
KOG3576|consensus	267		99.41
KOG3623|consensus	1007		99.28
KOG1074|consensus	958		99.26
KOG3608|consensus	467		99.03
PHA02768	55	hypothetical protein; Provisional	98.8
KOG1074|consensus	958		98.77
PHA00733	128	hypothetical protein	98.62
PHA00733	128	hypothetical protein	98.62
PHA02768	55	hypothetical protein; Provisional	98.58
PLN03086	567	PRLI-interacting factor K; Provisional	98.56
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.45
PHA00616	44	hypothetical protein	98.44
KOG3608|consensus	467		98.42
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.36
PLN03086	567	PRLI-interacting factor K; Provisional	98.27
KOG3993|consensus	500		97.97
PHA00732	79	hypothetical protein	97.95
PHA00616	44	hypothetical protein	97.86
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.82
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.64
PHA00732	79	hypothetical protein	97.6
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.45
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.19
KOG3993|consensus	500		97.14
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.04
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.96
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.94
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.9
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.87
smart00355	26	ZnF_C2H2 zinc finger.	96.43
PRK04860	160	hypothetical protein; Provisional	96.39
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.98
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.93
smart00355	26	ZnF_C2H2 zinc finger.	95.75
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.53
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.47
PRK04860	160	hypothetical protein; Provisional	95.46
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.37
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.03
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.14
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	94.09
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.87
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.53
COG5048	467	FOG: Zn-finger [General function prediction only]	91.33
KOG2893|consensus	341		90.63
KOG2186|consensus	276		88.87
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.81
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	87.7
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	87.05
KOG1146|consensus	1406		86.37
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	83.12

>KOG2462|consensus

Probab=99.82  E-value=1.6e-21  Score=138.20  Aligned_cols=111  Identities=18%  Similarity=0.218  Sum_probs=101.8

Q ss_pred             cccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHH
Q psy16400         21 FTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHI  100 (145)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~  100 (145)
                      ....|..|.........+.-|.++|+  -++.|.+|||.|...|.|..|+++|+|  +|||.|+.|++.|...++|..|+
T Consensus       160 ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTG--EKPF~C~hC~kAFADRSNLRAHm  235 (279)
T KOG2462|consen  160 KAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTG--EKPFSCPHCGKAFADRSNLRAHM  235 (279)
T ss_pred             ccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccC--CCCccCCcccchhcchHHHHHHH
Confidence            34567778999999999999999887  468999999999999999999999999  88999999999999999999999


Q ss_pred             HHhcCCCcccCCCCCCCCCCCCCchhhhhhcccCC
Q psy16400        101 RKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLST  135 (145)
Q Consensus       101 ~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~~~  135 (145)
                      ++|.+.|.|+|..|++.|.+...|..|.|......
T Consensus       236 QTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C~~~  270 (279)
T KOG2462|consen  236 QTHSDVKKHQCPRCGKSFALKSYLNKHSESACLKY  270 (279)
T ss_pred             HhhcCCccccCcchhhHHHHHHHHHHhhhhccccc
Confidence            99999999999999999999999999998876543

>KOG2462|consensus

Probab=99.73  E-value=2.6e-18  Score=121.98  Aligned_cols=107  Identities=16%  Similarity=0.153  Sum_probs=96.5

Q ss_pred             ccccchhhhccccCCCCCCCceeccC---CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHH
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVRTTQ---ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRV   98 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~   98 (145)
                      ...|..|.......+.|.+|...|-.   .+.+.|..|++.|++-..|+.|+++|+-    +.+|.+||+.|++..-|+-
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l----~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL----PCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCC----CcccccccccccchHHhhc
Confidence            35677788888888889999888854   6789999999999999999999999964    7899999999999999999


Q ss_pred             HHHHhcCCCcccCCCCCCCCCCCCCchhhhhhcc
Q psy16400         99 HIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASN  132 (145)
Q Consensus        99 H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~  132 (145)
                      |+|+|||||||.|..|++.|--...|.+|.|.+-
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS  239 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHS  239 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhc
Confidence            9999999999999999999999999998888654

>KOG3623|consensus

Probab=99.48  E-value=1.1e-14  Score=114.84  Aligned_cols=75  Identities=25%  Similarity=0.389  Sum_probs=70.2

Q ss_pred             cCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCC
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVN  122 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~  122 (145)
                      +...+|.|+.|.+.|.-...|.+|.--|+|  .+||.|.+|.+.|..+.+|..|.|.|.|||||+|+.|+++|...-
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsG--qRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSG  964 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSG--QRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSG  964 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcC--CCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhccccc
Confidence            446689999999999999999999999999  889999999999999999999999999999999999999998544

>KOG3576|consensus

Probab=99.42  E-value=2e-14  Score=98.37  Aligned_cols=104  Identities=17%  Similarity=0.181  Sum_probs=75.9

Q ss_pred             ccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHH
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      ...|..|...|.+...+++|+.-|..-+.|.|..||+.|.....|++|+++|+|  .+||+|..|++.|.+..+|..|.+
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtg--vrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTG--VRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccC--ccccchhhhhHHHHhhccHHHHHH
Confidence            345566777777777788888888777778888888888877888888888888  778888888888888888888777


Q ss_pred             HhcC-----------CCcccCCCCCCCCCCCCCchhh
Q psy16400        102 KYHT-----------SIELQSPSPAPRKPIVNPMQTQ  127 (145)
Q Consensus       102 ~h~~-----------~kp~~c~~c~~~~~~~~~~~~~  127 (145)
                      .-+|           +|-|.|..|+-........-.|
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h  231 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLH  231 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHH
Confidence            5444           4567787777666555444333

>KOG3576|consensus

Probab=99.41  E-value=5.2e-14  Score=96.32  Aligned_cols=86  Identities=15%  Similarity=0.303  Sum_probs=77.9

Q ss_pred             cCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCch
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQ  125 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~  125 (145)
                      .+...|+|.+|++.|...-.|.+|++.|..  .+.+.|..||+.|.....|++|.|+|+|.+||+|..|++.|...-.|.
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~--vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSD--VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccH--HHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHH
Confidence            346789999999999999999999999988  789999999999999999999999999999999999999999998887


Q ss_pred             hhhhhccc
Q psy16400        126 TQQQASNL  133 (145)
Q Consensus       126 ~~~~~~~~  133 (145)
                      .|..-.+.
T Consensus       191 shl~kvhg  198 (267)
T KOG3576|consen  191 SHLKKVHG  198 (267)
T ss_pred             HHHHHHcC
Confidence            77655444

>KOG3623|consensus

Probab=99.28  E-value=5.1e-13  Score=105.63  Aligned_cols=78  Identities=22%  Similarity=0.362  Sum_probs=74.6

Q ss_pred             ccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHH
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      ..+|+.|+..|...+.+.+|.=-|+|++||.|.+|.+.|..+..|..|++.|.|  +|||.|+.|++.|+..++...|+.
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSG--EKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSG--EKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccC--CCcchhhhhhhhcccccchHhhhc
Confidence            468999999999999999999999999999999999999999999999999999  889999999999999999988875

>KOG1074|consensus

Probab=99.26  E-value=2.2e-12  Score=103.28  Aligned_cols=62  Identities=19%  Similarity=0.171  Sum_probs=54.8

Q ss_pred             eeccCCCCcccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhc
Q psy16400         13 AFFFPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      ....+..+++..|--|.+.|+..+.+.-|+++|+|++||.|++||..|.++.+|+.|...|+
T Consensus       344 ~~~~~~~~~khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~  405 (958)
T KOG1074|consen  344 EGPSEKPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHR  405 (958)
T ss_pred             ccCCccccccchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeecc
Confidence            44556677777888899999999999999999999999999999999999999998877664

>KOG3608|consensus

Probab=99.03  E-value=3.6e-11  Score=88.53  Aligned_cols=110  Identities=20%  Similarity=0.281  Sum_probs=86.8

Q ss_pred             CCcccccchhhhccccCCCCCCCceeccC--CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhH
Q psy16400         19 GVFTAALSTLARFHWLNWDPNPKYVRTTQ--ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNL   96 (145)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l   96 (145)
                      +.-..+|..|.++|.....+.+|.+..+.  .++|.|..|.+.|.+...|..|++.|..    -|+|+.|+......++|
T Consensus       204 ~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn----~ykCplCdmtc~~~ssL  279 (467)
T KOG3608|consen  204 NEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN----CYKCPLCDMTCSSASSL  279 (467)
T ss_pred             CCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh----cccccccccCCCChHHH
Confidence            34445666777777777777777766653  5677788888888888888888887755    68999999999999999


Q ss_pred             HHHHHH-hcCCCcccCCCCCCCCCCCCCchhhhhhcc
Q psy16400         97 RVHIRK-YHTSIELQSPSPAPRKPIVNPMQTQQQASN  132 (145)
Q Consensus        97 ~~H~~~-h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~  132 (145)
                      ..|++. |..+|||+|+.|...+.....|+.|-+.+.
T Consensus       280 ~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  280 TTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            999995 788999999999999888777777666443

>PHA02768 hypothetical protein; Provisional

Probab=98.80  E-value=4.3e-09  Score=57.85  Aligned_cols=41  Identities=17%  Similarity=0.240  Sum_probs=30.1

Q ss_pred             cccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCC
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNP  123 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~  123 (145)
                      |.|+.||+.|....+|..|+++|+  ++|+|..|++.|.....
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~   46 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGE   46 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccce
Confidence            677777777777777777777777  67777777776665443

>KOG1074|consensus

Probab=98.77  E-value=2e-09  Score=86.72  Aligned_cols=105  Identities=20%  Similarity=0.198  Sum_probs=80.4

Q ss_pred             cCCCCcccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCC--CCCCcccC---CCcccc
Q psy16400         16 FPRGVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGG--KEPVHQCP---HCDYRA   90 (145)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~--~~k~~~C~---~C~~~f   90 (145)
                      ..+.....-|+.|.+.-.=.+.+.-|+++|+|++||.|.+||+.|.++.+|+.|+..|...  -+.++.|+   +|-+.|
T Consensus       599 ~~~~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kf  678 (958)
T KOG1074|consen  599 ENKRTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKF  678 (958)
T ss_pred             ccccCCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccc
Confidence            3344445667778888888888999999999999999999999999999999999988651  02356788   888999


Q ss_pred             CCchhHHHHHHHhcC-CC------------cccCCCCCCCCCC
Q psy16400         91 KQSGNLRVHIRKYHT-SI------------ELQSPSPAPRKPI  120 (145)
Q Consensus        91 ~~~~~l~~H~~~h~~-~k------------p~~c~~c~~~~~~  120 (145)
                      .+.-.|..|++.|.+ ..            ..+|..|.+.|.-
T Consensus       679 tn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~  721 (958)
T KOG1074|consen  679 TNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSD  721 (958)
T ss_pred             cccccccceEEeecCCCCCCCcccccccchhcccchhhhcccc
Confidence            999999999999883 22            2456666666643

>PHA00733 hypothetical protein

Probab=98.62  E-value=7.7e-09  Score=67.42  Aligned_cols=81  Identities=12%  Similarity=0.020  Sum_probs=58.6

Q ss_pred             cCCCceecccccccccChhhHHHH--hh---hhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCC
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRH--EV---FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPI  120 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h--~~---~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~  120 (145)
                      ..++.+.|.+|...|.....|..+  ..   .+.+  .++|.|..|++.|.....|..|++.+  +.+|.|..|++.|..
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~--~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~  111 (128)
T PHA00733         36 PEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKA--VSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRN  111 (128)
T ss_pred             hhhhhHHHHHHhhhccChhhhcchHHHHhhcccCC--CCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCC
Confidence            446778888888777766665554  11   2234  56888999999999888888888876  457899999988888


Q ss_pred             CCCchhhhhh
Q psy16400        121 VNPMQTQQQA  130 (145)
Q Consensus       121 ~~~~~~~~~~  130 (145)
                      ...|..|...
T Consensus       112 ~~sL~~H~~~  121 (128)
T PHA00733        112 TDSTLDHVCK  121 (128)
T ss_pred             HHHHHHHHHH
Confidence            7777655443

>PHA00733 hypothetical protein

Probab=98.62  E-value=5.2e-08  Score=63.50  Aligned_cols=75  Identities=16%  Similarity=0.298  Sum_probs=58.2

Q ss_pred             hhhhccccCCCCCCC-----ceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHH
Q psy16400         27 TLARFHWLNWDPNPK-----YVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        27 ~~~~~~~~~~~~~~~-----~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      .|...+.....+..+     ...+.+.++|.|..|++.|.....|..|++.+.    .+|.|..|++.|.....|..|+.
T Consensus        45 ~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~----~~~~C~~CgK~F~~~~sL~~H~~  120 (128)
T PHA00733         45 VVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE----HSKVCPVCGKEFRNTDSTLDHVC  120 (128)
T ss_pred             HHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC----cCccCCCCCCccCCHHHHHHHHH
Confidence            355455554444443     233455889999999999999999999998763    36999999999999999999988


Q ss_pred             HhcC
Q psy16400        102 KYHT  105 (145)
Q Consensus       102 ~h~~  105 (145)
                      ..++
T Consensus       121 ~~h~  124 (128)
T PHA00733        121 KKHN  124 (128)
T ss_pred             HhcC
Confidence            7664

>PHA02768 hypothetical protein; Provisional

Probab=98.58  E-value=3.3e-08  Score=54.33  Aligned_cols=43  Identities=19%  Similarity=0.386  Sum_probs=38.3

Q ss_pred             eecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHH
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLR   97 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~   97 (145)
                      |.|+.||+.|.....|..|++.|.    +++.|..|++.|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~----k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN----TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC----CcccCCcccceecccceeE
Confidence            799999999999999999999986    3789999999999876653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.56  E-value=3.2e-08  Score=78.23  Aligned_cols=87  Identities=16%  Similarity=0.197  Sum_probs=42.0

Q ss_pred             CCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCC----------chhHHHHHHHhcCC
Q psy16400         37 DPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQ----------SGNLRVHIRKYHTS  106 (145)
Q Consensus        37 ~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~----------~~~l~~H~~~h~~~  106 (145)
                      .+..|...++  +++.|. |+..+ .+..|..|+..|.+  .+++.|..|++.+..          ...|..|...+ |.
T Consensus       467 ~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp--~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~  539 (567)
T PLN03086        467 EMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCP--LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GS  539 (567)
T ss_pred             HHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCC--CCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CC
Confidence            3444544442  455555 55433 34455555555555  445555555555421          12455554443 55


Q ss_pred             CcccCCCCCCCCCCCCCchhhhhhc
Q psy16400        107 IELQSPSPAPRKPIVNPMQTQQQAS  131 (145)
Q Consensus       107 kp~~c~~c~~~~~~~~~~~~~~~~~  131 (145)
                      +++.|..|++.+... .|..|..+.
T Consensus       540 rt~~C~~Cgk~Vrlr-dm~~H~~~~  563 (567)
T PLN03086        540 RTAPCDSCGRSVMLK-EMDIHQIAV  563 (567)
T ss_pred             cceEccccCCeeeeh-hHHHHHHHh
Confidence            555555555444333 444444433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.45  E-value=5.3e-08  Score=45.78  Aligned_cols=24  Identities=25%  Similarity=0.257  Sum_probs=16.7

Q ss_pred             hHHHHHHHhcCCCcccCCCCCCCC
Q psy16400         95 NLRVHIRKYHTSIELQSPSPAPRK  118 (145)
Q Consensus        95 ~l~~H~~~h~~~kp~~c~~c~~~~  118 (145)
                      +|.+|+++|+|++||.|..|++.|
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEE
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCee
Confidence            366777777777777777777654

...

>PHA00616 hypothetical protein

Probab=98.44  E-value=9.4e-08  Score=50.10  Aligned_cols=33  Identities=18%  Similarity=0.285  Sum_probs=25.1

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      ||.|+.||+.|.+...|..|++.|+|++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            467777888888777888888777777777664

>KOG3608|consensus

Probab=98.42  E-value=3.8e-08  Score=72.89  Aligned_cols=118  Identities=16%  Similarity=0.199  Sum_probs=94.8

Q ss_pred             CCcccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHH
Q psy16400         19 GVFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRV   98 (145)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~   98 (145)
                      .++.+.=..|...+...+.++.|.+.|+++|...|..||.-|..+..|..|.+.-+.....+|.|..|.+.|.....|..
T Consensus       176 pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~  255 (467)
T KOG3608|consen  176 PVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKS  255 (467)
T ss_pred             ceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHH
Confidence            34445566788889999999999999999999999999999999999999988666433679999999999999999999


Q ss_pred             HHHHhcCCCcccCCCCCCCCCCCCCchhhhhhcccCCCCCCC
Q psy16400         99 HIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLSTNQTPV  140 (145)
Q Consensus        99 H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (145)
                      |+..|-  .-|+|+.|.-.-+....|..|.--.+..  ..|+
T Consensus       256 Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~--dkpf  293 (467)
T KOG3608|consen  256 HVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSK--DKPF  293 (467)
T ss_pred             HHHHhh--hcccccccccCCCChHHHHHHHHhhhcc--CCCc
Confidence            999997  5589988887666666665554444433  4444

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.36  E-value=3.4e-07  Score=43.00  Aligned_cols=26  Identities=31%  Similarity=0.557  Sum_probs=21.4

Q ss_pred             hHHHHhhhhcCCCCCCcccCCCccccCC
Q psy16400         65 TLKRHEVFECGGKEPVHQCPHCDYRAKQ   92 (145)
Q Consensus        65 ~l~~h~~~h~~~~~k~~~C~~C~~~f~~   92 (145)
                      +|..|++.|++  +++|.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~--~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTG--EKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSS--SSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCC--CCCCCCCCCcCeeCc
Confidence            47788889988  779999999888863

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.27  E-value=1.4e-06  Score=69.03  Aligned_cols=79  Identities=14%  Similarity=0.259  Sum_probs=62.5

Q ss_pred             CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCC------
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIV------  121 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~------  121 (145)
                      ++.+.|..|++.|. ...|..|+..++    +++.|+ |++.+ ....|..|+.+|..++++.|..|+..+...      
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H----kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~  523 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH----EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDV  523 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC----CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccch
Confidence            44578999999996 677999999874    379999 99765 568999999999999999999999988532      


Q ss_pred             ----CCchhhhhhccc
Q psy16400        122 ----NPMQTQQQASNL  133 (145)
Q Consensus       122 ----~~~~~~~~~~~~  133 (145)
                          ..|..|...+..
T Consensus       524 ~d~~s~Lt~HE~~CG~  539 (567)
T PLN03086        524 RDRLRGMSEHESICGS  539 (567)
T ss_pred             hhhhhhHHHHHHhcCC
Confidence                246666666543

>KOG3993|consensus

Probab=97.97  E-value=5.8e-07  Score=68.01  Aligned_cols=86  Identities=20%  Similarity=0.235  Sum_probs=68.5

Q ss_pred             eecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhc--------CCC---------------
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH--------TSI---------------  107 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~--------~~k---------------  107 (145)
                      |.|+.|...|.....|.+|.-.---  ..-|.|+.|+++|+-..+|..|.|.|.        +..               
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV--~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIV--HVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeE--EeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            7899999999999899988654332  224899999999999999999999883        222               


Q ss_pred             ----------cccCCCCCCCCCCCCCchhhhhhcccCCCCC
Q psy16400        108 ----------ELQSPSPAPRKPIVNPMQTQQQASNLSTNQT  138 (145)
Q Consensus       108 ----------p~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~  138 (145)
                                -|.|..|++.|..+..|..|+-.++...+..
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence                      2889999999999999988877777665554

>PHA00732 hypothetical protein

Probab=97.95  E-value=6.3e-06  Score=49.16  Aligned_cols=46  Identities=24%  Similarity=0.422  Sum_probs=34.8

Q ss_pred             ceecccccccccChhhHHHHhhh-hcCCCCCCcccCCCccccCCchhHHHHHHHh
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVF-ECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~-h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      +|.|..|++.|.....|..|++. |.+     +.|..|++.|.   .+..|.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~-----~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL-----TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC-----CccCCCCCEeC---Chhhhhccc
Confidence            47788999999988889988874 433     47888988887   466676544

>PHA00616 hypothetical protein

Probab=97.86  E-value=7.7e-06  Score=42.91  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=30.9

Q ss_pred             ceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|.|..||+.|..+..|..|++.|+|  .+++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg--~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK--QNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC--CCccceeE
Confidence            58999999999999999999999999  77888754

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.82  E-value=5.2e-05  Score=41.89  Aligned_cols=53  Identities=30%  Similarity=0.481  Sum_probs=39.3

Q ss_pred             ceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      .|.|..|++ ..+...|..|....+....+.+.|++|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            488999999 55577899997754443345799999987544  488889887653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.64  E-value=3.9e-05  Score=34.58  Aligned_cols=22  Identities=32%  Similarity=0.733  Sum_probs=12.3

Q ss_pred             cccCCCccccCCchhHHHHHHH
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.60  E-value=4.9e-05  Score=45.35  Aligned_cols=37  Identities=19%  Similarity=0.374  Sum_probs=32.6

Q ss_pred             CcccCCCccccCCchhHHHHHHH-hcCCCcccCCCCCCCCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRK-YHTSIELQSPSPAPRKP  119 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~kp~~c~~c~~~~~  119 (145)
                      ||.|..|++.|.....|..|++. |.+   +.|..|++.|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC
Confidence            58899999999999999999985 553   58999999887

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.45  E-value=0.00011  Score=33.05  Aligned_cols=23  Identities=48%  Similarity=0.821  Sum_probs=21.1

Q ss_pred             eecccccccccChhhHHHHhhhh
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFE   73 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (145)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.19  E-value=0.00035  Score=31.34  Aligned_cols=23  Identities=35%  Similarity=0.712  Sum_probs=12.1

Q ss_pred             cccCCCccccCCchhHHHHHHHh
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      |.|+.|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555666666666666665554

...

>KOG3993|consensus

Probab=97.14  E-value=0.00012  Score=55.89  Aligned_cols=78  Identities=14%  Similarity=0.242  Sum_probs=58.3

Q ss_pred             hhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCC------C-----------------------
Q psy16400         28 LARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGK------E-----------------------   78 (145)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~------~-----------------------   78 (145)
                      |.-.+.....+.+|.=.-.-..-|.|.+|+|.|.-..+|..|.+.|....      .                       
T Consensus       273 CK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~ds  352 (500)
T KOG3993|consen  273 CKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDS  352 (500)
T ss_pred             HHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcc
Confidence            44444455555555444444556999999999999999999999885310      0                       


Q ss_pred             --CCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         79 --PVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        79 --k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                        --|.|..|++.|.....|..|+-+|+.
T Consensus       353 s~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  353 SSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence              137899999999999999999988874

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.04  E-value=0.00045  Score=32.28  Aligned_cols=24  Identities=33%  Similarity=0.873  Sum_probs=14.6

Q ss_pred             eecccccccccChhhHHHHhhhhc
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      |.|..|++.|.+...|..|++.|.
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            556666666666666666665543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.96  E-value=0.00066  Score=50.18  Aligned_cols=53  Identities=30%  Similarity=0.607  Sum_probs=31.9

Q ss_pred             CCCceeccc--ccccccChhhHHHHhhhhc-C----------------CCCCCcccCCCccccCCchhHHHH
Q psy16400         47 QENQYSCQH--CGKRYRWKSTLKRHEVFEC-G----------------GKEPVHQCPHCDYRAKQSGNLRVH   99 (145)
Q Consensus        47 ~~k~~~C~~--c~~~f~~~~~l~~h~~~h~-~----------------~~~k~~~C~~C~~~f~~~~~l~~H   99 (145)
                      ++|+|.|.+  |.|.|...-.|+-|+.--+ .                .+.|||.|.+|++.|.+..-|+.|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYH  417 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH  417 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceec
Confidence            358888876  8888888777777765221 0                012455555555555555555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.94  E-value=0.00087  Score=36.09  Aligned_cols=31  Identities=35%  Similarity=0.517  Sum_probs=20.4

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCc
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIE  108 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  108 (145)
                      ..|-.|++|+..+.+..+|.+|+.++++.||
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            5577888888888888888888888877765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.90  E-value=0.00041  Score=32.43  Aligned_cols=26  Identities=23%  Similarity=0.383  Sum_probs=23.1

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58899999999999999999987753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.87  E-value=0.00098  Score=29.79  Aligned_cols=23  Identities=39%  Similarity=0.807  Sum_probs=19.3

Q ss_pred             eecccccccccChhhHHHHhhhh
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFE   73 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (145)
                      |.|..|++.|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>smart00355 ZnF_C2H2 zinc finger

Probab=96.43  E-value=0.0035  Score=28.29  Aligned_cols=22  Identities=32%  Similarity=0.693  Sum_probs=13.1

Q ss_pred             ccCCCccccCCchhHHHHHHHh
Q psy16400         82 QCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        82 ~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      .|..|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4555666666666666666544

>PRK04860 hypothetical protein; Provisional

Probab=96.39  E-value=0.0026  Score=43.04  Aligned_cols=38  Identities=13%  Similarity=0.132  Sum_probs=31.6

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIV  121 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~  121 (145)
                      +|.|. |+.   ....+.+|.++|+++++|.|..|...+...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            68887 876   677788999999999999999999876544

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.98  E-value=0.0044  Score=45.96  Aligned_cols=50  Identities=18%  Similarity=0.305  Sum_probs=39.4

Q ss_pred             CCCcccCC--CccccCCchhHHHHHHHhc-------------------CCCcccCCCCCCCCCCCCCchhh
Q psy16400         78 EPVHQCPH--CDYRAKQSGNLRVHIRKYH-------------------TSIELQSPSPAPRKPIVNPMQTQ  127 (145)
Q Consensus        78 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~-------------------~~kp~~c~~c~~~~~~~~~~~~~  127 (145)
                      +|||+|++  |.+.|.+..-|+.|+.-.+                   .+|||.|..|+++--..+-|.-|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYH  417 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH  417 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceec
Confidence            47999975  9999999999999976533                   14899999999987666665443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.93  E-value=0.0072  Score=36.95  Aligned_cols=25  Identities=28%  Similarity=0.651  Sum_probs=21.3

Q ss_pred             CcccCCCccccCCchhHHHHHHHhc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      .+.|..|++.|.....|..|++.+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCcc
Confidence            5899999999999999999999753

>smart00355 ZnF_C2H2 zinc finger

Probab=95.75  E-value=0.0089  Score=26.86  Aligned_cols=24  Identities=42%  Similarity=0.787  Sum_probs=21.2

Q ss_pred             eecccccccccChhhHHHHhhhhc
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      |.|..|++.|.....|..|+..|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.53  E-value=0.011  Score=26.83  Aligned_cols=21  Identities=24%  Similarity=0.681  Sum_probs=12.1

Q ss_pred             eecccccccccChhhHHHHhh
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEV   71 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (145)
                      |.|..|++.|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345566666666665555554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.47  E-value=0.019  Score=30.95  Aligned_cols=33  Identities=24%  Similarity=0.370  Sum_probs=23.5

Q ss_pred             cCCCceecccccccccChhhHHHHhhhhcCCCCCC
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPV   80 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~   80 (145)
                      ..+.+..|.+|+..+....+|.+|+...++  .||
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~--~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHF--KKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTT--TS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhc--ccC
Confidence            456789999999999999999999988877  554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.46  E-value=0.0097  Score=40.28  Aligned_cols=38  Identities=29%  Similarity=0.623  Sum_probs=32.4

Q ss_pred             ceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCc
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQS   93 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~   93 (145)
                      +|.|. |+.   ....+.+|.+++.+  .++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g--~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRG--EAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcC--CccEECCCCCceeEEe
Confidence            69998 987   46678999999999  7899999999887654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.37  E-value=0.015  Score=26.13  Aligned_cols=23  Identities=39%  Similarity=1.038  Sum_probs=12.3

Q ss_pred             cccCCCccccCCchhHHHHHHHhc
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      |.|..|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666665555 556666666543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.03  E-value=0.012  Score=26.66  Aligned_cols=23  Identities=26%  Similarity=0.528  Sum_probs=20.4

Q ss_pred             cccCCCccccCCchhHHHHHHHh
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      |.|..|+..|.....+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999998754

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.14  E-value=0.026  Score=26.23  Aligned_cols=22  Identities=27%  Similarity=0.602  Sum_probs=16.9

Q ss_pred             eecccccccccChhhHHHHhhh
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVF   72 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~   72 (145)
                      |.|..|++.|.+...+..|+..
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5688888888888887777654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=94.09  E-value=0.084  Score=28.88  Aligned_cols=37  Identities=24%  Similarity=0.395  Sum_probs=28.6

Q ss_pred             CcccCCCccccCCchhHHHHHHHhc-C-CCcccCCCCCCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYH-T-SIELQSPSPAPR  117 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~kp~~c~~c~~~  117 (145)
                      .|.|+.|++. .....|..|....+ . .+.+.|+.|...
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~   40 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSR   40 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhh
Confidence            4899999995 44578999988744 3 357999999864

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.87  E-value=0.058  Score=24.15  Aligned_cols=23  Identities=43%  Similarity=0.694  Sum_probs=17.7

Q ss_pred             eecccccccccChhhHHHHhhhhc
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      |.|..|+.... ...|..|+..++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            67999998887 889999988765

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.53  E-value=0.12  Score=23.58  Aligned_cols=21  Identities=24%  Similarity=0.525  Sum_probs=13.3

Q ss_pred             cccCCCccccCCchhHHHHHHH
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      ..|+.|++.| ....|..|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4577777777 55566666553

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.33  E-value=0.068  Score=40.74  Aligned_cols=66  Identities=20%  Similarity=0.279  Sum_probs=53.2

Q ss_pred             CceecccccccccChhhHHHHhh--hhcCCCC--CCcccC--CCccccCCchhHHHHHHHhcCCCcccCCCCCC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEV--FECGGKE--PVHQCP--HCDYRAKQSGNLRVHIRKYHTSIELQSPSPAP  116 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~--~h~~~~~--k~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~  116 (145)
                      .++.|..|...|.....+..|..  .|.+  .  +++.|+  .|++.|.+...+..|...|++.+++.+..-..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSG--ESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNS  359 (467)
T ss_pred             cCCCCccccCCcccccccccccccccccc--ccCCceeeeccCCCccccccccccCCcccccCCCccccccccC
Confidence            36778888888888888888888  6887  6  788888  68888999888888988888887777754433

>KOG2893|consensus

Probab=90.63  E-value=0.079  Score=37.99  Aligned_cols=42  Identities=19%  Similarity=0.440  Sum_probs=30.5

Q ss_pred             ecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHH
Q psy16400         52 SCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVH   99 (145)
Q Consensus        52 ~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H   99 (145)
                      .|..|++.|.....|..|++      .|-|+|-+|.+..-...-|..|
T Consensus        12 wcwycnrefddekiliqhqk------akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK------AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhh------hccceeeeehhhhccCCCceee
Confidence            58899999999999999877      4468888886653333333333

>KOG2186|consensus

Probab=88.87  E-value=0.28  Score=35.45  Aligned_cols=50  Identities=16%  Similarity=0.414  Sum_probs=37.0

Q ss_pred             ceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhc
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      -|+|+.||.... +..+..|+...++  . .|.|.-|++.|..- ....|..=-+
T Consensus         3 ~FtCnvCgEsvK-Kp~vekH~srCrn--~-~fSCIDC~k~F~~~-sYknH~kCIT   52 (276)
T KOG2186|consen    3 FFTCNVCGESVK-KPQVEKHMSRCRN--A-YFSCIDCGKTFERV-SYKNHTKCIT   52 (276)
T ss_pred             EEehhhhhhhcc-ccchHHHHHhccC--C-eeEEeecccccccc-hhhhhhhhcc
Confidence            378999997765 5677889888876  3 68999999999884 4556755333

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.81  E-value=0.35  Score=23.51  Aligned_cols=22  Identities=14%  Similarity=0.422  Sum_probs=15.3

Q ss_pred             ceecccccccccChhhHHHHhh
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEV   71 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~   71 (145)
                      .|.|+.|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777766666655

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=87.70  E-value=0.46  Score=23.16  Aligned_cols=10  Identities=50%  Similarity=1.248  Sum_probs=5.9

Q ss_pred             eecccccccc
Q psy16400         51 YSCQHCGKRY   60 (145)
Q Consensus        51 ~~C~~c~~~f   60 (145)
                      |.|..||..+
T Consensus         2 ~~C~~CGy~y   11 (33)
T cd00350           2 YVCPVCGYIY   11 (33)
T ss_pred             EECCCCCCEE
Confidence            5566666544

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=87.05  E-value=0.59  Score=28.23  Aligned_cols=25  Identities=24%  Similarity=0.588  Sum_probs=21.8

Q ss_pred             ceecccccccccChhhHHHHhhhhc
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      .+.|..|++.|.+...|..|+..+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCcc
Confidence            6899999999999999999999753

>KOG1146|consensus

Probab=86.37  E-value=1  Score=39.83  Aligned_cols=61  Identities=23%  Similarity=0.441  Sum_probs=48.2

Q ss_pred             ceeccCCCceecccccccccChhhHHHHhhhhcCC-----------------------CCCCcccCCCccccCCchhHHH
Q psy16400         42 YVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGG-----------------------KEPVHQCPHCDYRAKQSGNLRV   98 (145)
Q Consensus        42 ~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~-----------------------~~k~~~C~~C~~~f~~~~~l~~   98 (145)
                      ...+.-.+.+.|..|+..|.....|..|++..+..                       ..++|.|..|...+.-+.+|.+
T Consensus       457 ~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsi  536 (1406)
T KOG1146|consen  457 VVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSI  536 (1406)
T ss_pred             eeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHH
Confidence            34445568899999999999999999999972110                       1358889999999999999999


Q ss_pred             HHHH
Q psy16400         99 HIRK  102 (145)
Q Consensus        99 H~~~  102 (145)
                      |++.
T Consensus       537 hlqS  540 (1406)
T KOG1146|consen  537 HLQS  540 (1406)
T ss_pred             HHHH
Confidence            9775

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=83.12  E-value=0.94  Score=28.64  Aligned_cols=15  Identities=20%  Similarity=0.461  Sum_probs=8.9

Q ss_pred             CCcccCCCccccCCc
Q psy16400         79 PVHQCPHCDYRAKQS   93 (145)
Q Consensus        79 k~~~C~~C~~~f~~~   93 (145)
                      .|..|+.||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            356666666665544

The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	145
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-05

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 26  STLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH 85
           STL+    ++ D  P          Y CQ+CGKR+  KS +K+H     G  E  H+C  
Sbjct: 15  STLSTHLLIHSDTRP----------YPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQV 62
Query: 86  CDYRAKQSGNLRVHIRKY 103
           C     QS NL  H RK+
Sbjct: 63  CGKAFSQSSNLITHSRKH 80

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	145
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	5e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	2e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-04

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 63.3 bits (155), Expect = 1e-14
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 44  RT-TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK 102
           RT + E  Y C  C  R+    T+K H + +         CPHCD    +  +L VH+RK
Sbjct: 8   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67

Query: 103 YHT 105
            H+
Sbjct: 68  QHS 70

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 55.6 bits (135), Expect = 1e-11
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 44  RT-TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK 102
            T   E+ Y C+ C + Y   S   RH V        V+ CP C     +  N+  H++ 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 103 YH 104
            H
Sbjct: 63  IH 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 55.2 bits (134), Expect = 2e-11
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
           +  +   C  C      K+ L+ HE   C  + P  +C +C +  KQ  NL  H++K   
Sbjct: 5   SSGHPEKCSECSYSCSSKAALRIHERIHCTDR-P-FKCNYCSFDTKQPSNLSKHMKK-FH 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.4 bits (126), Expect = 3e-10
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 45  TTQENQYSCQHCGKRYRWKSTLKRHEVF--ECGGKEPVHQCPHCDYRAKQSGNLRVHIRK 102
           ++  +   C+ CG   R K++L  H+    E         C  C  R ++  ++  H  K
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSK 60

Query: 103 YHTSIELQSPSPA 115
            H ++ L     +
Sbjct: 61  SHPALLLAPQESS 73

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.8 bits (113), Expect = 1e-08
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 50  QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY 103
           +Y C+ CG R +  S LK+H           + C +C++  K  GNL  H++  
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTD--VRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.8 bits (102), Expect = 2e-06
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
                + C+ CGK +  K  LK H     G K P ++C  CDY A  S +L  H+R  H+
Sbjct: 4   GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVK-P-YKCKTCDYAAADSSSLNKHLRI-HS 60

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 39.3 bits (93), Expect = 4e-05
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
           T    Y C+ C       S+L +H       + P  +C  C Y ++ S  L VH+R  HT
Sbjct: 32  TGVKPYKCKTCDYAAADSSSLNKHLRIHSDER-P-FKCQICPYASRNSSQLTVHLRS-HT 88

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 14/67 (20%), Positives = 19/67 (28%), Gaps = 8/67 (11%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGK-------EPVHQCPHCDYRAKQSGNLRV 98
             +     + C + +     L  H   E  G            +CP      K    L  
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 99  HIRKYHT 105
           HIR  HT
Sbjct: 81  HIRV-HT 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
           + E  YSC  CG R++ K  +  H     G     + C  C     +  +L  HI++ H+
Sbjct: 31  SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 7e-05
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
           +  +  +C+ CGK +R    L RH++   G K P + CP C  R K+   +  H+R  H 
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEK-P-YSCPVCGLRFKRKDRMSYHVRS-HD 59

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.5 bits (98), Expect = 4e-06
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 46  TQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY 103
           TQ+  Y C H  C KR+   S LKRHE    G   P  +   C +  K       H+ + 
Sbjct: 27  TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAEC 84

Query: 104 H 104
           H
Sbjct: 85  H 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 35.3 bits (82), Expect = 8e-04
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 51  YSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCPH--CDYRAKQSGNLRVHIRKYHT 105
           Y C    CGK ++  + LK H+       +  ++CPH  CD R      L+ H +  H 
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQ--QLPYECPHEGCDKRFSLPSRLKRHEKV-HA 57

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 43.0 bits (102), Expect = 5e-06
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 9/65 (13%)

Query: 48  ENQYSCQHCGKRYRWKSTLKRHEVFEC--GGKEPVHQCPHCDYRA-----KQSGNLRVHI 100
           E       C + +  +  L  H   E   G ++    C            K    L VH+
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKE-FVCHWGGCSRELRPFKAQYMLVVHM 59

Query: 101 RKYHT 105
           R+ HT
Sbjct: 60  RR-HT 63

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 42.2 bits (98), Expect = 6e-06
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 41  KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHI 100
           + + +   +Q+ C  C   +    +LK+H  +    K     CP C      + +   H+
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV----CPVCKKEFTSTDSALDHV 120

Query: 101 RKYHT 105
            K H 
Sbjct: 121 CKKHN 125

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.0 bits (97), Expect = 8e-06
 Identities = 16/66 (24%), Positives = 20/66 (30%), Gaps = 6/66 (9%)

Query: 44  RT-TQENQYSCQHCGKRYRWKSTLKRHEVF---ECGGKEPVHQCPHCDYRAKQSGNLRVH 99
           RT T E  Y+C HC K +R K  L  H                C  C     +   +  H
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA-FVCSKCGKTFTRRNTMARH 66

Query: 100 IRKYHT 105
                 
Sbjct: 67  ADN-CA 71

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
             E  ++C  C + +R +  L+ H V   G   P ++C  C  +  Q  +L+ H+ K H+
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEM-P-YKCSSCSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY-- 103
           +  +   C  C K++  K  LK H     G K P  +CP C     +  NL  H  +   
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEK-P-FECPKCGKCYFRKENLLEHEARNCM 60

Query: 104 HT 105
           + 
Sbjct: 61  NR 62

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECG--GKEPVHQCPHCDYRAKQSGNLRVHIRKY 103
           T E  + C  CGK Y  K  L  HE   C    ++    C  C    ++   LR+H+   
Sbjct: 31  TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-FTCSVCQETFRRRMELRLHMVS- 88

Query: 104 HT 105
           HT
Sbjct: 89  HT 90

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
           +    Y CQ+CGKR+  KS +K+H     G K P H+C  C     QS NL  H RK HT
Sbjct: 25  SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEK-P-HKCQVCGKAFSQSSNLITHSRK-HT 81

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.6 bits (91), Expect = 3e-05
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 51  YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
           + C+ C + +  +  LKRH       K P + C  C+    +   L  H +K H+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEK-P-YPCGLCNRAFTRRDLLIRHAQKIHS 55

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 39.0 bits (90), Expect = 5e-05
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 44  RTTQENQYSCQHCGKRYRWKSTLKRHEVFECGG--KEPVHQCPHCDYRAKQSGNLRVHIR 101
               E  Y C++C  +    +    H   E         + C  C++  K+   L  H  
Sbjct: 12  NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNL 71

Query: 102 KYHTS 106
           KYH  
Sbjct: 72  KYHPG 76

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.4 bits (88), Expect = 1e-04
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 46  TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
             +  Y C  C   +R+K  L  H+    G K P ++C  C  +  +  NL+ H R  H+
Sbjct: 13  HSDKPYKCDRCQASFRYKGNLASHKTVHTGEK-P-YRCNICGAQFNRPANLKTHTRI-HS 69

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 44  RT-TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK 102
           R  T +  + C+ C + +     L  H     G K P   C  C  +  +S   + H + 
Sbjct: 27  RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK-P-FACDICGRKFARSDERKRHTKI 84

Query: 103 YHT 105
            H 
Sbjct: 85  -HL 86

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 6/26 (23%)

Query: 91  KQSGNLRVHIRKYHTSIELQSPSPAP 116
           KQ+      ++K   S++L +   AP
Sbjct: 19  KQA------LKKLQASLKLYADDSAP 38

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 3/55 (5%)

Query: 51  YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
           + C+ C + +     L  H     G K P   C  C  +  +S   + H      
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEK-P-FACDICGRKFARSDERKRHRDI-QH 55

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 35.5 bits (83), Expect = 8e-04
 Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 16/70 (22%)

Query: 44  RT-TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVH-----QCPHCDYRAKQSGNLR 97
           RT T E  ++C  CG+++      KRH          +           +    ++ +L 
Sbjct: 24  RTHTGEKPFACDICGRKFARSDERKRHRD--------IQHILPILEDKVEELLSKNYHLE 75

Query: 98  VHIRKY--HT 105
             + +     
Sbjct: 76  NEVARLKKLV 85

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 15/62 (24%)

Query: 51  YSCQHCGKRYRWKSTLKRHEV-------FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY 103
           + C  CGK +   S LKRH++       F+C  +        C  R     NLR H+R  
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG-------CGKRFSLDFNLRTHVRI- 86

Query: 104 HT 105
           HT
Sbjct: 87  HT 88

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 46  TQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCPH--CDYRAKQSGNLRVHIR 101
           +  +   C    CG+ +  +  L  H+ ++   ++    CP   C        +L+ H++
Sbjct: 3   SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEHMK 61

Query: 102 KYHT 105
             H+
Sbjct: 62  L-HS 64

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 46 TQENQYSCQHCGKRYRWKSTLKRH 69
            E  Y C+ CG R+R   TLK H
Sbjct: 7  GGEKPYPCEICGTRFRHLQTLKSH 30

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 33/92 (35%)

Query: 45  TTQENQYSCQH--CGKRYRWKSTLKRH------------EVFECG--------------- 75
            +++  + C +  C KRY   S L+ H            +  +C                
Sbjct: 1   ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

Query: 76  --GKEPVHQCPHCDYRAKQSGNLRVHIRKYHT 105
             G +P  QC  C  +  +S +L+ H R  HT
Sbjct: 61  HTGVKP-FQCKTCQRKFSRSDHLKTHTRT-HT 90

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	145
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.8
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.75
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.74
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.73
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.72
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.72
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.71
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.69
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.69
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.68
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.68
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.67
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.67
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.64
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.63
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.62
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.62
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.61
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.59
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.59
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.58
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.58
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.58
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.58
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.57
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.56
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.55
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.55
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.54
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.52
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.52
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.51
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.51
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.5
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.5
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.49
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.48
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.48
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.47
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.47
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.45
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.45
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.44
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.43
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.42
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.41
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.34
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.33
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.33
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.31
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.31
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.28
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.27
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.27
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.26
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.25
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.25
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.22
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.2
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.2
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.19
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.19
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.17
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.16
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.16
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.15
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.14
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.14
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.14
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.12
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.11
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.1
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.08
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.06
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.03
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.02
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.02
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.02
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.01
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.01
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.0
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.0
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.0
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.99
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.99
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.99
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.98
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.91
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.88
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.87
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.87
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.87
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.83
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.81
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.79
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.79
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.77
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.73
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.69
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.67
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.66
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.66
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.62
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.6
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.58
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.55
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.53
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.39
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.38
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.38
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.34
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.34
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.34
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.34
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.33
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.33
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.31
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.31
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.31
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.31
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.28
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.25
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.25
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.23
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.22
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.5
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.1
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.09
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.09
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.08
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.06
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.03
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.02
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.99
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.98
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.96
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.95
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.95
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.92
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.13
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.9
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.9
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.86
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.86
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.82
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.77
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.76
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.96
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.94
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.7
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.85
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.6
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.18
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.26
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.34
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.82
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.57
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.73
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	90.94
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.72
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.7
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.29
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	86.62
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	83.08

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.80  E-value=1.2e-20  Score=123.21  Aligned_cols=94  Identities=14%  Similarity=0.096  Sum_probs=68.3

Q ss_pred             CCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCC
Q psy16400         38 PNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPR  117 (145)
Q Consensus        38 ~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~  117 (145)
                      ...+..+|.|+++|.|.+|++.|.....|..|++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|++.
T Consensus        10 ~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~   87 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW--EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKS   87 (133)
T ss_dssp             SSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC--CSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             HhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC--CCCeeCCccCeecccccchhhhccccCCCccccCCCCCCC
Confidence            34455667777777777777777777777777777777  6677777777777777777777777777777777777777


Q ss_pred             CCCCCCchhhhhhccc
Q psy16400        118 KPIVNPMQTQQQASNL  133 (145)
Q Consensus       118 ~~~~~~~~~~~~~~~~  133 (145)
                      |.....|..|....+.
T Consensus        88 F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           88 FINYQFMSSHIKSVHS  103 (133)
T ss_dssp             ESSHHHHHHHHHHHTC
T ss_pred             cCCHHHHHHHhHHhcC
Confidence            7777777666655543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.75  E-value=1.7e-19  Score=117.73  Aligned_cols=98  Identities=16%  Similarity=0.163  Sum_probs=89.4

Q ss_pred             cccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHH
Q psy16400         21 FTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHI  100 (145)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~  100 (145)
                      -...|..|...|.....+..|+++|+++++|.|.+|++.|.....|..|+++|.+  +++|.|..|++.|.....|..|+
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~   98 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTG--ERRYQCLACGKSFINYQFMSSHI   98 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHT--CCCEEESSSCCEESSHHHHHHHH
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCC--CccccCCCCCCCcCCHHHHHHHh
Confidence            3456778999999999999999999999999999999999999999999999999  88999999999999999999999


Q ss_pred             HHhcCCC------cccCCCCCCCCCC
Q psy16400        101 RKYHTSI------ELQSPSPAPRKPI  120 (145)
Q Consensus       101 ~~h~~~k------p~~c~~c~~~~~~  120 (145)
                      ++|++++      +|.|..|+..|..
T Consensus        99 ~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           99 KSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             HHhcCCCCCCCCCCeecCCCCchhhh
Confidence            9998765      5888899876653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=4.1e-19  Score=113.56  Aligned_cols=110  Identities=19%  Similarity=0.265  Sum_probs=99.7

Q ss_pred             ccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhh---hcCCCCCCcccCCCccccCCchhHHH
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVF---ECGGKEPVHQCPHCDYRAKQSGNLRV   98 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~---h~~~~~k~~~C~~C~~~f~~~~~l~~   98 (145)
                      ...|..|...|.....+..|+..|.++++|.|..|++.|.....|..|+..   +.+  .++|.|..|++.|.....|..
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~--~~~~~C~~C~~~f~~~~~l~~   84 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS--EQVFTCSVCQETFRRRMELRL   84 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSC--CCCEECSSSCCEESSHHHHHH
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCC--CCCeECCCCCCccCCHHHHHH
Confidence            456778999999999999999999999999999999999999999999986   456  779999999999999999999


Q ss_pred             HHHHhcCCCcccCCCCCCCCCCCCCchhhhhhccc
Q psy16400         99 HIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNL  133 (145)
Q Consensus        99 H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~  133 (145)
                      |++.|+++++|.|..|+..|.....|..|....+.
T Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           85 HMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            99999999999999999999998888888765443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.73  E-value=3.4e-19  Score=113.28  Aligned_cols=102  Identities=20%  Similarity=0.332  Sum_probs=94.1

Q ss_pred             chhhhccccCCCCCCCceeccCCCceecc--cccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHh
Q psy16400         26 STLARFHWLNWDPNPKYVRTTQENQYSCQ--HCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~k~~~C~--~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      ..|...|.....+..|+..|.++++|.|.  .|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|
T Consensus        12 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h   89 (119)
T 2jp9_A           12 PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG--VKPFQCKTCQRKFSRSDHLKTHTRTH   89 (119)
T ss_dssp             TTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC--CCCccCCccCchhCCHHHHHHHHHHh
Confidence            35888999999999999999999999999  799999999999999999999  78999999999999999999999999


Q ss_pred             cCCCcccC--CCCCCCCCCCCCchhhhh
Q psy16400        104 HTSIELQS--PSPAPRKPIVNPMQTQQQ  129 (145)
Q Consensus       104 ~~~kp~~c--~~c~~~~~~~~~~~~~~~  129 (145)
                      +++++|.|  ..|++.|.....|..|..
T Consensus        90 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           90 TGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             cCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            99999999  899999988777766643

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.72  E-value=3.9e-18  Score=109.19  Aligned_cols=104  Identities=21%  Similarity=0.282  Sum_probs=95.3

Q ss_pred             hhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC--CccccCCchhHHHHHHHhc
Q psy16400         27 TLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH--CDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~  104 (145)
                      .|...|.....+..|+..| ++++|.|..|++.|.....|..|+..|.+  .++|.|..  |++.|.....|..|++.|+
T Consensus        12 ~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   88 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG--EKPFQCTFEGCGKRFSLDFNLRTHVRIHT   88 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSC--CCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCC--CCCeeCCCCCCcCccCCHHHHHHHHHHhC
Confidence            6888888888999999998 88999999999999999999999999999  78999975  9999999999999999999


Q ss_pred             CCCcccCC--CCCCCCCCCCCchhhhhhccc
Q psy16400        105 TSIELQSP--SPAPRKPIVNPMQTQQQASNL  133 (145)
Q Consensus       105 ~~kp~~c~--~c~~~~~~~~~~~~~~~~~~~  133 (145)
                      ++++|.|.  .|++.|.....|..|......
T Consensus        89 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           89 GDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             CCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            99999995  699999999999888766543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.72  E-value=4.5e-18  Score=96.17  Aligned_cols=58  Identities=28%  Similarity=0.550  Sum_probs=55.5

Q ss_pred             CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      |+||.|.+|++.|.....|..|+++|+|  +++|.|..|++.|.....|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~--ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLG--YRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCC--CcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7899999999999999999999999999  889999999999999999999999999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=3e-17  Score=98.55  Aligned_cols=82  Identities=18%  Similarity=0.322  Sum_probs=74.5

Q ss_pred             CCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCC--CCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         37 DPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGK--EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        37 ~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~--~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      .+.+|+++|+++++|.|.+|++.|.....|..|++.+.+..  .++|.|..|++.|.....|..|+++|++++++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            46789999999999999999999999999999998877621  1689999999999999999999999999999999999


Q ss_pred             CCCC
Q psy16400        115 APRK  118 (145)
Q Consensus       115 ~~~~  118 (145)
                      +.++
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.70  E-value=8.1e-19  Score=120.27  Aligned_cols=103  Identities=19%  Similarity=0.328  Sum_probs=57.8

Q ss_pred             cchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhc
Q psy16400         25 LSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      |..|...|.....+..|+..|.++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+++|+
T Consensus        80 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~  157 (190)
T 2i13_A           80 CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHT  157 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            344555555555555555555555555555555555555555555555555  445556556666655556666665565


Q ss_pred             CCCcccCCCCCCCCCCCCCchhhhh
Q psy16400        105 TSIELQSPSPAPRKPIVNPMQTQQQ  129 (145)
Q Consensus       105 ~~kp~~c~~c~~~~~~~~~~~~~~~  129 (145)
                      ++++|.|..|++.|.....|..|..
T Consensus       158 ~~~~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          158 GEKPYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHH
Confidence            5566666666655555555554443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=2.9e-18  Score=108.63  Aligned_cols=98  Identities=11%  Similarity=0.008  Sum_probs=87.1

Q ss_pred             CCCCCCCceeccCCCceecccccccccChhhHHHHhhh--hcCCCCCCc-ccCCCcccc--CCchhHHHHHHHhcCCCcc
Q psy16400         35 NWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVF--ECGGKEPVH-QCPHCDYRA--KQSGNLRVHIRKYHTSIEL  109 (145)
Q Consensus        35 ~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~--h~~~~~k~~-~C~~C~~~f--~~~~~l~~H~~~h~~~kp~  109 (145)
                      ...+..|+++|+++++|.|..|++.|.....|..|++.  |.+  .+++ .|..|++.|  .....|..|+++|+++++|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~--~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR--DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCB--CSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccc--cCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            45688999999999999999999999999999999998  665  4454 599999998  8999999999999999999


Q ss_pred             cCCCCCCCCCCCCCchhhhhhcccC
Q psy16400        110 QSPSPAPRKPIVNPMQTQQQASNLS  134 (145)
Q Consensus       110 ~c~~c~~~~~~~~~~~~~~~~~~~~  134 (145)
                      .|..|++.|.....|..|....+..
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCc
Confidence            9999999999998888887765543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.69  E-value=5.1e-17  Score=101.32  Aligned_cols=86  Identities=14%  Similarity=0.225  Sum_probs=71.6

Q ss_pred             cCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCch
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQ  125 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~  125 (145)
                      .++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|+++++|.|..|+..|.....|.
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            556788888888888888888888888888  778888888888888888888888888888888888888888887777


Q ss_pred             hhhhhccc
Q psy16400        126 TQQQASNL  133 (145)
Q Consensus       126 ~~~~~~~~  133 (145)
                      .|...+..
T Consensus        91 ~H~~~H~~   98 (106)
T 2ee8_A           91 VHKTLHMQ   98 (106)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHhCC
Confidence            77655543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.69  E-value=1.9e-17  Score=103.32  Aligned_cols=90  Identities=20%  Similarity=0.253  Sum_probs=83.6

Q ss_pred             CcccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHH
Q psy16400         20 VFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVH   99 (145)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H   99 (145)
                      .....|..|...|.....+..|+..|.++++|.|.+|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK--EKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCC--CCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCC--CCCeECCCcCCcccCHHHHHHH
Confidence            34456778999999999999999999999999999999999999999999999999  7899999999999999999999


Q ss_pred             HHHhcCCCcccC
Q psy16400        100 IRKYHTSIELQS  111 (145)
Q Consensus       100 ~~~h~~~kp~~c  111 (145)
                      +++|+++++|.+
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            999999999864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=2.9e-17  Score=100.64  Aligned_cols=87  Identities=21%  Similarity=0.336  Sum_probs=76.2

Q ss_pred             ccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCc
Q psy16400         45 TTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPM  124 (145)
Q Consensus        45 ~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~  124 (145)
                      +.++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|+++++|.|..|+..|.....|
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQL   80 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC--CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCC--CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHH
Confidence            4677889999999999999999999999988  77999999999999999999999999999999999999999888888


Q ss_pred             hhhhhhccc
Q psy16400        125 QTQQQASNL  133 (145)
Q Consensus       125 ~~~~~~~~~  133 (145)
                      ..|......
T Consensus        81 ~~H~~~h~~   89 (96)
T 2dmd_A           81 TVHLRSHTG   89 (96)
T ss_dssp             HHHHTTCCS
T ss_pred             HHHHHHhcC
Confidence            777665543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=5.7e-17  Score=95.72  Aligned_cols=71  Identities=24%  Similarity=0.380  Sum_probs=65.5

Q ss_pred             CCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         39 NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        39 ~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      .+....+.++++|.|.+|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+++|++++||.|
T Consensus         7 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG--EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC--SCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCC--CcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444566788999999999999999999999999999  7899999999999999999999999999999987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.7e-17  Score=104.18  Aligned_cols=85  Identities=20%  Similarity=0.301  Sum_probs=77.7

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVN  122 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~  122 (145)
                      ..|+++++|.| .|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|+++++|.|..|++.|....
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRD   79 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCC--CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHH
Confidence            45789999999 899999999999999999998  789999999999999999999999999999999999999999887


Q ss_pred             Cchhhhhh
Q psy16400        123 PMQTQQQA  130 (145)
Q Consensus       123 ~~~~~~~~  130 (145)
                      .|..|...
T Consensus        80 ~l~~H~~~   87 (110)
T 2csh_A           80 SFHRHVTS   87 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77666543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.6e-16  Score=93.96  Aligned_cols=72  Identities=15%  Similarity=0.372  Sum_probs=67.5

Q ss_pred             cCCCceeccc--ccccccChhhHHHHhh-hhcCCCCCCcccCC--CccccCCchhHHHHHHHhcCCCcccCCCCCCCCC
Q psy16400         46 TQENQYSCQH--CGKRYRWKSTLKRHEV-FECGGKEPVHQCPH--CDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKP  119 (145)
Q Consensus        46 ~~~k~~~C~~--c~~~f~~~~~l~~h~~-~h~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~  119 (145)
                      +++++|.|..  |++.|.....|..|++ .|.+  .++|.|..  |++.|.....|..|+++|+++++|.|..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~--~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH--QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS--CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC--CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            5778999997  9999999999999999 7988  78999998  9999999999999999999999999999999873

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=8.8e-17  Score=98.27  Aligned_cols=85  Identities=22%  Similarity=0.373  Sum_probs=77.7

Q ss_pred             cCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCC--CcccCCCCCCCCCCCCC
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTS--IELQSPSPAPRKPIVNP  123 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~--kp~~c~~c~~~~~~~~~  123 (145)
                      +++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|+++  ++|.|..|+..|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSG--EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDH   80 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCS--SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHH
Confidence            578899999999999999999999999998  78999999999999999999999999987  99999999999998888


Q ss_pred             chhhhhhcc
Q psy16400        124 MQTQQQASN  132 (145)
Q Consensus       124 ~~~~~~~~~  132 (145)
                      |..|....+
T Consensus        81 L~~H~~~~H   89 (95)
T 2yt9_A           81 LNGHIKQVH   89 (95)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHhc
Confidence            888865433

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.65  E-value=1.6e-17  Score=113.72  Aligned_cols=105  Identities=24%  Similarity=0.337  Sum_probs=60.8

Q ss_pred             cccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHH
Q psy16400         23 AALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      ..|..|...|.....+..|+..|.++++|.|..|++.|.....|..|+..|.+  .++|.|..|++.|.....|..|++.
T Consensus        22 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG--EKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             ---------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCC--CCCccCcccCCccCCHHHHHHHHHh
Confidence            44556666666666666777777777777777777777777777777766666  5566666666666666666666666


Q ss_pred             hcCCCcccCCCCCCCCCCCCCchhhhh
Q psy16400        103 YHTSIELQSPSPAPRKPIVNPMQTQQQ  129 (145)
Q Consensus       103 h~~~kp~~c~~c~~~~~~~~~~~~~~~  129 (145)
                      |+++++|.|..|+..|.....|..|..
T Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~  126 (190)
T 2i13_A          100 HTGEKPYACPECGKSFSQLAHLRAHQR  126 (190)
T ss_dssp             HHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence            666666666666666655555544443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=8.8e-17  Score=97.26  Aligned_cols=84  Identities=20%  Similarity=0.352  Sum_probs=72.5

Q ss_pred             CCCceecc--cccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCc
Q psy16400         47 QENQYSCQ--HCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPM  124 (145)
Q Consensus        47 ~~k~~~C~--~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~  124 (145)
                      |+++|.|.  .|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|+++++|.|..|+..|.....|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   78 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDER   78 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHH
Confidence            46789997  599999999999999999988  77999999999999999999999999999999999999999888888


Q ss_pred             hhhhhhcc
Q psy16400        125 QTQQQASN  132 (145)
Q Consensus       125 ~~~~~~~~  132 (145)
                      ..|.....
T Consensus        79 ~~H~~~H~   86 (90)
T 1a1h_A           79 KRHTKIHL   86 (90)
T ss_dssp             HHHHGGGG
T ss_pred             HHHHHHhc
Confidence            77765543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.64  E-value=2.8e-17  Score=109.12  Aligned_cols=113  Identities=16%  Similarity=0.183  Sum_probs=99.3

Q ss_pred             CCCcccccchhhhccccCCCCCCCcee-ccCCCc--------eecccccccccChhhHHHHhhhhcCCCCCCcccCC--C
Q psy16400         18 RGVFTAALSTLARFHWLNWDPNPKYVR-TTQENQ--------YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH--C   86 (145)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~k~--------~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~--C   86 (145)
                      +......|..|...|.....+..|+.. |.++.+        |.|..|++.|.....|..|++.|.+  .++|.|..  |
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C   98 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG--EKPFPCPFPGC   98 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC--CCSEECSCTTT
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC--CCcccCCcCCC
Confidence            334456677899999999999999987 776654        7899999999999999999999999  78999998  9


Q ss_pred             ccccCCchhHHHHHHHhcCCCcccCCC--CCCCCCCCCCchhhhhhcc
Q psy16400         87 DYRAKQSGNLRVHIRKYHTSIELQSPS--PAPRKPIVNPMQTQQQASN  132 (145)
Q Consensus        87 ~~~f~~~~~l~~H~~~h~~~kp~~c~~--c~~~~~~~~~~~~~~~~~~  132 (145)
                      ++.|.....|..|+++|+++++|.|..  |++.|.....|..|...+.
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~  146 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT  146 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTT
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhc
Confidence            999999999999999999999999997  9999998888887765443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.7e-17  Score=109.93  Aligned_cols=102  Identities=20%  Similarity=0.201  Sum_probs=70.6

Q ss_pred             chhhhccccCCCCCCCceeccCCCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccCC--CccccCCchhHHHHH-
Q psy16400         26 STLARFHWLNWDPNPKYVRTTQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCPH--CDYRAKQSGNLRVHI-  100 (145)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~--C~~~f~~~~~l~~H~-  100 (145)
                      ..|...|.....+..|+..|+++++|.|..  |++.|.....|..|++.|.+  .++|.|..  |++.|.....|..|+ 
T Consensus        43 ~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~L~~H~~  120 (155)
T 2gli_A           43 SRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG--EKPYMCEHEGCSKAFSNASDRAKHQN  120 (155)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTT--CCCEECCSTTCCCEESSSSTTHHHHH
T ss_pred             cchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCC--CCCeeCCCCCCCCccCCHHHHHHHHH
Confidence            344466666666777777777777777764  77777777777777777776  66777776  777777777777776 


Q ss_pred             HHhcCCCcccCCC--CCCCCCCCCCchhhhh
Q psy16400        101 RKYHTSIELQSPS--PAPRKPIVNPMQTQQQ  129 (145)
Q Consensus       101 ~~h~~~kp~~c~~--c~~~~~~~~~~~~~~~  129 (145)
                      +.|+++++|.|..  |++.|.....|..|..
T Consensus       121 ~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~  151 (155)
T 2gli_A          121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK  151 (155)
T ss_dssp             HTTCSCCCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             HhcCCCCCeeCCCCCCccccCCHHHHHHHHH
Confidence            5677777777766  7777766666655544

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.62  E-value=1.6e-16  Score=94.37  Aligned_cols=78  Identities=18%  Similarity=0.318  Sum_probs=68.3

Q ss_pred             ceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhh
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQ  129 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~  129 (145)
                      +|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|+++++|.|..|+..|.....|..|..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD--TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT--CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC--CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            47899999999999999999999988  7789999999999999999999999999999999999998887777766654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=7.2e-16  Score=90.24  Aligned_cols=65  Identities=25%  Similarity=0.520  Sum_probs=60.7

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcc
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIEL  109 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  109 (145)
                      ..+.++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+++|++++||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG--EKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC--CCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCC--CCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            345778999999999999999999999999999  88999999999999999999999999999986

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.6e-16  Score=97.77  Aligned_cols=86  Identities=14%  Similarity=0.118  Sum_probs=72.9

Q ss_pred             CCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCC
Q psy16400         39 NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRK  118 (145)
Q Consensus        39 ~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~  118 (145)
                      ..++++|+++++|.|.+|++.|.....|..|++.|.    ++|.|..|++.|.....|..|++ |+++++|.|..|++.|
T Consensus         5 ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~----~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f   79 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR----NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTF   79 (107)
T ss_dssp             CCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH----HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEEC
T ss_pred             cccCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC----CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchh
Confidence            345667788889999999999999999999988874    37899999999999999999985 8899999999999988


Q ss_pred             CCCCCchhhhh
Q psy16400        119 PIVNPMQTQQQ  129 (145)
Q Consensus       119 ~~~~~~~~~~~  129 (145)
                      .....|..|..
T Consensus        80 ~~~~~L~~H~~   90 (107)
T 1wjp_A           80 KSSFSIWRHQV   90 (107)
T ss_dssp             SSHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            88888877765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=3.4e-16  Score=95.79  Aligned_cols=86  Identities=19%  Similarity=0.270  Sum_probs=80.2

Q ss_pred             ccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHH
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      +..|..|...|.....+..|+..|.++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~   85 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD--ERPFKCQICPYASRNSSQLTVHLR   85 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCC--CCCEECSSSSCEESSHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCCccCCHHHHHHHHH
Confidence            356777999999999999999999999999999999999999999999999999  789999999999999999999999


Q ss_pred             HhcCCCcc
Q psy16400        102 KYHTSIEL  109 (145)
Q Consensus       102 ~h~~~kp~  109 (145)
                      +|+++++.
T Consensus        86 ~h~~~~~p   93 (96)
T 2dmd_A           86 SHTGDSGP   93 (96)
T ss_dssp             TCCSCCCC
T ss_pred             HhcCCCCC
Confidence            99998754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=8.5e-16  Score=94.87  Aligned_cols=79  Identities=16%  Similarity=0.159  Sum_probs=70.1

Q ss_pred             ccCCCCCCCceeccCCCceeccccccccc-ChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         33 WLNWDPNPKYVRTTQENQYSCQHCGKRYR-WKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        33 ~~~~~~~~~~~~~~~~k~~~C~~c~~~f~-~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      .....+..|+++|+++++|.|..|++.|. ....|..|++.|.+. .++|.|.+|++.|.....|..|+++|++++|+..
T Consensus         7 ~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~-~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A            7 GPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKL-QDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHH-HHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCC-CCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            34456788999999999999999999999 999999999998861 3489999999999999999999999999998654


Q ss_pred             C
Q psy16400        112 P  112 (145)
Q Consensus       112 ~  112 (145)
                      .
T Consensus        86 ~   86 (98)
T 2gqj_A           86 E   86 (98)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=5.7e-16  Score=96.48  Aligned_cols=71  Identities=14%  Similarity=0.192  Sum_probs=64.1

Q ss_pred             eccCCCceecccccccccChhhHHHHhh-hh---cCCCCCCcccCCCccccCCchhHHHH-HHHhcCCCcccCCCCCC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEV-FE---CGGKEPVHQCPHCDYRAKQSGNLRVH-IRKYHTSIELQSPSPAP  116 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~-~h---~~~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~kp~~c~~c~~  116 (145)
                      ..+|+++|.|..|++.|.....|..|++ .|   .+  +++|.|..|++.|.....|..| +++|++++||.|..+..
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~--ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVL--NSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCC--SCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCC--CCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            3478999999999999999999999997 48   45  7799999999999999999999 89999999999987554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.59  E-value=2.5e-16  Score=107.83  Aligned_cols=105  Identities=17%  Similarity=0.279  Sum_probs=84.8

Q ss_pred             chhhhccccCCCCCCCceeccCCCceecc--cccccccChhhHHHHh-hhh-cCCCCCCccc--CCCccccCCchhHHHH
Q psy16400         26 STLARFHWLNWDPNPKYVRTTQENQYSCQ--HCGKRYRWKSTLKRHE-VFE-CGGKEPVHQC--PHCDYRAKQSGNLRVH   99 (145)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~k~~~C~--~c~~~f~~~~~l~~h~-~~h-~~~~~k~~~C--~~C~~~f~~~~~l~~H   99 (145)
                      ..|...|.....+..|+.+|.++++|.|.  .|++.|.....|..|+ ..| .+  .++|.|  ..|++.|.....|..|
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~--~~~~~C~~~~C~k~f~~~~~L~~H  125 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK--ICVYVCHFENCGKAFKKHNQLKVH  125 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTT--TSCCEECSSSSCEECSSHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCC--cceeeCCCCCCccccCCHHHHHHH
Confidence            56778888888888888888888888888  7888888888888888 455 24  568888  7888888888888889


Q ss_pred             HHHhcCCCcccCCC--CCCCCCCCCCchhhhhhcc
Q psy16400        100 IRKYHTSIELQSPS--PAPRKPIVNPMQTQQQASN  132 (145)
Q Consensus       100 ~~~h~~~kp~~c~~--c~~~~~~~~~~~~~~~~~~  132 (145)
                      +++|+++++|.|..  |++.|.....|..|.....
T Consensus       126 ~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~  160 (190)
T 1tf6_A          126 QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA  160 (190)
T ss_dssp             HGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSC
T ss_pred             HHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhC
Confidence            88888888899977  8888888777777765443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=6.1e-16  Score=102.42  Aligned_cols=106  Identities=12%  Similarity=0.113  Sum_probs=95.7

Q ss_pred             ccccchhhhccccCCCCCCCce---eccCCCceecccc-----cccccChhhHHHHhhhhcCCCCCCcccCC--CccccC
Q psy16400         22 TAALSTLARFHWLNWDPNPKYV---RTTQENQYSCQHC-----GKRYRWKSTLKRHEVFECGGKEPVHQCPH--CDYRAK   91 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~k~~~C~~c-----~~~f~~~~~l~~h~~~h~~~~~k~~~C~~--C~~~f~   91 (145)
                      ...+..|...|.....+..|+.   .|.++++|.|.+|     ++.|.....|..|++.|.+  .++|.|..  |++.|.
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG--EKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC--CCCCCCCSTTCCCCCS
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC--CCCccCCCCCCCCccc
Confidence            4567778899999999999988   7889999998753     4999999999999999999  78999985  999999


Q ss_pred             CchhHHHHHHHhcCCCcccCCC--CCCCCCCCCCchhhhh
Q psy16400         92 QSGNLRVHIRKYHTSIELQSPS--PAPRKPIVNPMQTQQQ  129 (145)
Q Consensus        92 ~~~~l~~H~~~h~~~kp~~c~~--c~~~~~~~~~~~~~~~  129 (145)
                      ....|..|++.|+++++|.|..  |++.|.....|..|..
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  120 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN  120 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHH
Confidence            9999999999999999999998  9999999999988873

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=3e-15  Score=86.60  Aligned_cols=65  Identities=25%  Similarity=0.550  Sum_probs=61.0

Q ss_pred             eccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCccc
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQ  110 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  110 (145)
                      .|+++++|.|.+|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+++|++++|..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT--DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC--SCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            46889999999999999999999999999999  789999999999999999999999999998754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.58  E-value=1.9e-16  Score=95.75  Aligned_cols=79  Identities=15%  Similarity=0.223  Sum_probs=73.9

Q ss_pred             hhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         27 TLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      .|...|.....+..|+..|.++++|.|..|++.|.....|..|+..|.+  .++|.|..|++.|.....|..|+++|+++
T Consensus        11 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG--EKPFACDICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             SCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC--CCCEECTTTCCEESSHHHHHHHHGGGGC-
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCC--CCCccCCCCCchhCCHHHHHHHHHHhccc
Confidence            5888888889999999999999999999999999999999999999999  78999999999999999999999999987


Q ss_pred             C
Q psy16400        107 I  107 (145)
Q Consensus       107 k  107 (145)
                      +
T Consensus        89 k   89 (90)
T 1a1h_A           89 K   89 (90)
T ss_dssp             -
T ss_pred             C
Confidence            6

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.58  E-value=1.5e-16  Score=105.55  Aligned_cols=88  Identities=20%  Similarity=0.318  Sum_probs=83.0

Q ss_pred             cccchhhhccccCCCCCCCceeccCCCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccCC--CccccCCchhHHH
Q psy16400         23 AALSTLARFHWLNWDPNPKYVRTTQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCPH--CDYRAKQSGNLRV   98 (145)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~--C~~~f~~~~~l~~   98 (145)
                      ..|..|...|.....+..|+.+|+++++|.|..  |++.|.....|..|++.|.+  .++|.|..  |++.|.....|..
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~--~~~~~C~~~~C~k~f~~~~~L~~  140 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG--EKPFKCEFEGCDRRFANSSDRKK  140 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCS--SCSBCCSSTTCCCCBSSHHHHHH
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCC--CCCccCCCCCCCCccCCHHHHHH
Confidence            467788999999999999999999999999998  99999999999999999999  88999997  9999999999999


Q ss_pred             HHHHhcCCCcccCC
Q psy16400         99 HIRKYHTSIELQSP  112 (145)
Q Consensus        99 H~~~h~~~kp~~c~  112 (145)
                      |+++|++++||.|.
T Consensus       141 H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          141 HMHVHTSDKSGPSS  154 (155)
T ss_dssp             SSTTTTSCCCSCSC
T ss_pred             HHHHhcCCCCCCCC
Confidence            99999999999986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=5.4e-15  Score=86.06  Aligned_cols=66  Identities=26%  Similarity=0.404  Sum_probs=61.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      .+.++|+++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+++|+++.
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG--EKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGC--SCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCC--CCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            346678999999999999999999999999999999  889999999999999999999999999874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.56  E-value=4.5e-16  Score=92.44  Aligned_cols=80  Identities=29%  Similarity=0.459  Sum_probs=73.9

Q ss_pred             ccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHh
Q psy16400         24 ALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      .|..|...+.....+..|+..|.++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+++|
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHT--CCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             cCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcC--CCCCcCCCcchhhCChHHHHHHHHhh
Confidence            3566888888888899999999999999999999999999999999999999  78999999999999999999999999


Q ss_pred             cC
Q psy16400        104 HT  105 (145)
Q Consensus       104 ~~  105 (145)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.55  E-value=3e-15  Score=94.83  Aligned_cols=85  Identities=24%  Similarity=0.393  Sum_probs=78.1

Q ss_pred             cCCCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccC--CCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCC
Q psy16400         46 TQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCP--HCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIV  121 (145)
Q Consensus        46 ~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~  121 (145)
                      +++++|.|.+  |++.|.....|..|++.|.+  .++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG--EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC--CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCH
Confidence            5788999997  99999999999999999999  7899999  7999999999999999999999999999999999988


Q ss_pred             CCchhhhhhcc
Q psy16400        122 NPMQTQQQASN  132 (145)
Q Consensus       122 ~~~~~~~~~~~  132 (145)
                      ..|..|.....
T Consensus        80 ~~l~~H~~~h~   90 (119)
T 2jp9_A           80 DHLKTHTRTHT   90 (119)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            88887766543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.55  E-value=2.6e-15  Score=90.49  Aligned_cols=80  Identities=24%  Similarity=0.353  Sum_probs=71.8

Q ss_pred             CCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccC--CCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCC
Q psy16400         48 ENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCP--HCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNP  123 (145)
Q Consensus        48 ~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~  123 (145)
                      .+.|.|..  |++.|.....|..|+..|.+  .++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTG--EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDH   80 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCS--SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCC--CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHH
Confidence            46799999  99999999999999999998  7799997  699999999999999999999999999999999988777


Q ss_pred             chhhhh
Q psy16400        124 MQTQQQ  129 (145)
Q Consensus       124 ~~~~~~  129 (145)
                      |..|..
T Consensus        81 l~~H~~   86 (89)
T 2wbs_A           81 LALHMK   86 (89)
T ss_dssp             HHHHGG
T ss_pred             HHHHHH
Confidence            766654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.54  E-value=1e-14  Score=89.70  Aligned_cols=82  Identities=24%  Similarity=0.323  Sum_probs=73.1

Q ss_pred             cCCCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccC--CCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCC
Q psy16400         46 TQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCP--HCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIV  121 (145)
Q Consensus        46 ~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~  121 (145)
                      ..+++|.|..  |++.|.....|..|++.|.+  .++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|...
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   88 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG--EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRS   88 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSC--CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCC--CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCH
Confidence            4567899996  99999999999999999998  7799996  6999999999999999999999999999999999887


Q ss_pred             CCchhhhh
Q psy16400        122 NPMQTQQQ  129 (145)
Q Consensus       122 ~~~~~~~~  129 (145)
                      ..|..|..
T Consensus        89 ~~l~~H~~   96 (100)
T 2ebt_A           89 DHLALHMK   96 (100)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77776654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.4e-14  Score=85.29  Aligned_cols=69  Identities=28%  Similarity=0.513  Sum_probs=61.4

Q ss_pred             CCCCCceeccCCCceecccccccccChhhHHHHhh-hhcCCCCCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         37 DPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEV-FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        37 ~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~-~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      .+.+|+++|+++++|.|.+|++.|.....|..|+. .|.+. .++|.|..|++.|.....|..|++.+++.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN-VAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS-CSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC-CCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999999997 56551 37999999999999999999999987653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.3e-15  Score=94.09  Aligned_cols=89  Identities=15%  Similarity=0.109  Sum_probs=80.1

Q ss_pred             ccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHH
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      +..|..|...|.....+..|+..|  .++|.|.+|++.|.....|..|+. |.+  +++|.|..|++.|.....|..|++
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~--~~~~~C~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCE--YKKLTCLECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCS--TGGGEEGGGTEECSSHHHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCC--CCCccCccccchhCCHHHHHHHHH
Confidence            456777999999999999999988  468999999999999999999996 988  889999999999999999999997


Q ss_pred             -HhcCCCcccCCCCC
Q psy16400        102 -KYHTSIELQSPSPA  115 (145)
Q Consensus       102 -~h~~~kp~~c~~c~  115 (145)
                       .|.++++|.|..+.
T Consensus        91 ~~H~~~~~~~~~~p~  105 (107)
T 1wjp_A           91 EVHNQNNMAPTSGPS  105 (107)
T ss_dssp             HTSCCCCCCCCCCSC
T ss_pred             HHcCCCCCCCCCCCC
Confidence             89999999987543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=5.7e-15  Score=91.00  Aligned_cols=70  Identities=16%  Similarity=0.293  Sum_probs=61.5

Q ss_pred             CCCCceeccCCCceecccccccc-cChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHH-HHHhcCCCccc
Q psy16400         38 PNPKYVRTTQENQYSCQHCGKRY-RWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVH-IRKYHTSIELQ  110 (145)
Q Consensus        38 ~~~~~~~~~~~k~~~C~~c~~~f-~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~kp~~  110 (145)
                      +..|...+.++++|.|..|++.| .....|..|++.| +  +++|.|.+|++.|.....|..| +++|+++..|.
T Consensus        22 ~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~--~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           22 EEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K--QEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             HHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C--CCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             HHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C--CCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            44567778889999999999999 9999999999999 8  7899999999999999999999 88887654443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=5e-15  Score=91.10  Aligned_cols=84  Identities=19%  Similarity=0.335  Sum_probs=75.7

Q ss_pred             CcccccchhhhccccCCCCCCCceeccCCCceecc--cccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHH
Q psy16400         20 VFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQ--HCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLR   97 (145)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~--~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~   97 (145)
                      .+.+....|...|.....+..|+..|.++++|.|.  .|++.|.....|..|++.|.+  .++|.|..|++.|.....|.
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG--AKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS--CCSCBCSSSCCBCSSHHHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCcCccCCHHHHH
Confidence            34444445899999999999999999999999996  699999999999999999999  88999999999999999999


Q ss_pred             HHHHHhcC
Q psy16400         98 VHIRKYHT  105 (145)
Q Consensus        98 ~H~~~h~~  105 (145)
                      .|+++|++
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99999974

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.51  E-value=1.2e-15  Score=104.44  Aligned_cols=108  Identities=19%  Similarity=0.320  Sum_probs=96.4

Q ss_pred             cccchhhhccccCCCCCCCceeccCCCceec--ccccccccChhhHHHHhhhhcCCCCCCcccC--CCccccCCchhHHH
Q psy16400         23 AALSTLARFHWLNWDPNPKYVRTTQENQYSC--QHCGKRYRWKSTLKRHEVFECGGKEPVHQCP--HCDYRAKQSGNLRV   98 (145)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C--~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~--~C~~~f~~~~~l~~   98 (145)
                      ..+..|...|.....+..|+..|.++++|.|  ..|++.|.....|..|++.|.+  .++|.|.  .|++.|.....|..
T Consensus        15 C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~   92 (190)
T 1tf6_A           15 CSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG--EKNFTCDSDGCDLRFTTKANMKK   92 (190)
T ss_dssp             CSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT--CCCEECCSSSCCCEESCHHHHHH
T ss_pred             CCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC--CCceeCCCCCCCCccCCHHHHHH
Confidence            3336799999999999999999999999999  8899999999999999999999  7899999  89999999999999


Q ss_pred             HH-HHh-cCCCcccC--CCCCCCCCCCCCchhhhhhcc
Q psy16400         99 HI-RKY-HTSIELQS--PSPAPRKPIVNPMQTQQQASN  132 (145)
Q Consensus        99 H~-~~h-~~~kp~~c--~~c~~~~~~~~~~~~~~~~~~  132 (145)
                      |+ +.| .++++|.|  ..|++.|.....|..|.....
T Consensus        93 H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~  130 (190)
T 1tf6_A           93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT  130 (190)
T ss_dssp             HHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS
T ss_pred             HHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC
Confidence            99 456 47899999  899999999888888876543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=6e-15  Score=89.99  Aligned_cols=85  Identities=20%  Similarity=0.310  Sum_probs=76.1

Q ss_pred             ccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHH
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      ...|..|...|.....+..|+..|.++++|.|..|++.|.....|..|++.|.+...++|.|..|++.|.....|..|++
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~   86 (95)
T 2yt9_A            7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIK   86 (95)
T ss_dssp             CEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHH
T ss_pred             CeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHH
Confidence            35567789999999999999999999999999999999999999999999999832289999999999999999999997


Q ss_pred             -HhcCC
Q psy16400        102 -KYHTS  106 (145)
Q Consensus       102 -~h~~~  106 (145)
                       .|.++
T Consensus        87 ~~H~~~   92 (95)
T 2yt9_A           87 QVHSGP   92 (95)
T ss_dssp             HTSCCC
T ss_pred             HhcCCC
Confidence             57654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.50  E-value=2.7e-14  Score=86.01  Aligned_cols=65  Identities=20%  Similarity=0.251  Sum_probs=57.8

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHH-HhcCCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR-KYHTSI  107 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~k  107 (145)
                      ....+.+.++|.|.+|++.|.....|..|+++|++  +++|.|..|++.|.....|..|++ .|.+|.
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRLLHA--AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSC--SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccC--CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34455678899999999999999999999999999  889999999999999999999976 577664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.50  E-value=4.7e-15  Score=94.69  Aligned_cols=87  Identities=23%  Similarity=0.374  Sum_probs=75.5

Q ss_pred             ccccchhhhccccCCCCCCCceeccCCCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccC--CCccccCCchhHH
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVRTTQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCP--HCDYRAKQSGNLR   97 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~--~C~~~f~~~~~l~   97 (145)
                      ...|..|...|.....+..|+..|+++++|.|..  |++.|.....|..|++.|.+  .++|.|.  .|++.|.....|.
T Consensus        34 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~L~  111 (124)
T 1ubd_C           34 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG--DRPYVCPFDGCNKKFAQSTNLK  111 (124)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHC--CCCCCCCSTTCCCCCSSTTTTH
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCceECCCCCCCCccCCHHHHH
Confidence            3567789999999999999999999999999986  99999999999999999999  7899995  5999999999999


Q ss_pred             HHHHHhcCCCccc
Q psy16400         98 VHIRKYHTSIELQ  110 (145)
Q Consensus        98 ~H~~~h~~~kp~~  110 (145)
                      .|+++|+++++++
T Consensus       112 ~H~~~H~~~k~~q  124 (124)
T 1ubd_C          112 SHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHC------
T ss_pred             HHHHHHcccccCC
Confidence            9999999998763

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.9e-14  Score=91.66  Aligned_cols=85  Identities=18%  Similarity=0.235  Sum_probs=77.6

Q ss_pred             cCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHH---hcCCCcccCCCCCCCCCCCC
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK---YHTSIELQSPSPAPRKPIVN  122 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~---h~~~kp~~c~~c~~~~~~~~  122 (145)
                      +++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.   +.++++|.|..|++.|....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTG--EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRM   80 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSS--CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCC--CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHH
Confidence            578899999999999999999999999999  7899999999999999999999996   57899999999999999888


Q ss_pred             Cchhhhhhcc
Q psy16400        123 PMQTQQQASN  132 (145)
Q Consensus       123 ~~~~~~~~~~  132 (145)
                      .|..|.....
T Consensus        81 ~l~~H~~~h~   90 (124)
T 2dlq_A           81 ELRLHMVSHT   90 (124)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHcC
Confidence            8888876543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.2e-14  Score=81.20  Aligned_cols=62  Identities=26%  Similarity=0.487  Sum_probs=56.8

Q ss_pred             ceeccCCCceecccccccccChhhHHHHhhh-h-cCCCCCCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         42 YVRTTQENQYSCQHCGKRYRWKSTLKRHEVF-E-CGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        42 ~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~-h-~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      .++|+++++|.|..|++.|.....|..|++. | .+  .++|.|..|++.|.....|..|++.+++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~--~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN--VKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSS--CCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCC--CcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3578999999999999999999999999998 6 46  7899999999999999999999999886

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.48  E-value=4.7e-14  Score=78.12  Aligned_cols=57  Identities=32%  Similarity=0.576  Sum_probs=50.3

Q ss_pred             CCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         47 QENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        47 ~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      |+++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTG--EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHC--CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCC--CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46789999999999999999999999999  8899999999999999999999999874

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.48  E-value=9.4e-15  Score=82.39  Aligned_cols=56  Identities=13%  Similarity=0.081  Sum_probs=51.8

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhhccc
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNL  133 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~  133 (145)
                      +|||.|.+|++.|.....|..|+++|+|++||.|..|++.|.....|..|.-.+..
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            67999999999999999999999999999999999999999999999888765543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.1e-13  Score=81.55  Aligned_cols=70  Identities=17%  Similarity=0.293  Sum_probs=59.6

Q ss_pred             eccCCCceecccccccccChhhHHHHhhhhcCC-CCCCcccCCCccccCCchhHHHHHH-HhcCCCcccCCC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEVFECGG-KEPVHQCPHCDYRAKQSGNLRVHIR-KYHTSIELQSPS  113 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~-~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~kp~~c~~  113 (145)
                      .|+++++|.|.+|++.|.....|..|++.|.+. ..++|.|..|++.|.....|..|++ .|.++++.....
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            378999999999999999999999999999841 1569999999999999999999995 466777665443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=8.1e-16  Score=89.34  Aligned_cols=71  Identities=17%  Similarity=0.229  Sum_probs=64.3

Q ss_pred             CCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         35 NWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        35 ~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      ...+..|+++|.++++|.|..|++.|.....|..         .++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4568899999999999999999999998877664         3489999999999999999999999999999999877

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.6e-14  Score=90.53  Aligned_cols=80  Identities=16%  Similarity=0.262  Sum_probs=74.9

Q ss_pred             cccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHH
Q psy16400         23 AALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      ..| .|...|.....+..|++.|.++++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.
T Consensus        11 ~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A           11 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG--IKPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             EEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCC--CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             Eec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCC--CCCeeCCCCcchhcCHHHHHHHHHH
Confidence            344 5999999999999999999999999999999999999999999999999  7899999999999999999999999


Q ss_pred             hcC
Q psy16400        103 YHT  105 (145)
Q Consensus       103 h~~  105 (145)
                      |+.
T Consensus        88 ~~~   90 (110)
T 2csh_A           88 CTK   90 (110)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.45  E-value=7.6e-16  Score=93.07  Aligned_cols=80  Identities=14%  Similarity=0.255  Sum_probs=68.2

Q ss_pred             CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhh
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQ  127 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~  127 (145)
                      +++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|++.|++ .+|.|..|+..|.....|..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG--EKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC--CCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC--CCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHH
Confidence            4689999999999999999999999998  7799999999999999999999999885 889999888877666666555


Q ss_pred             hhh
Q psy16400        128 QQA  130 (145)
Q Consensus       128 ~~~  130 (145)
                      ...
T Consensus        78 ~~~   80 (88)
T 1llm_C           78 VAR   80 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.44  E-value=1.7e-14  Score=86.86  Aligned_cols=82  Identities=22%  Similarity=0.380  Sum_probs=73.8

Q ss_pred             cccccchhhhccccCCCCCCCceeccCCCceecc--cccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHH
Q psy16400         21 FTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQ--HCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRV   98 (145)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~--~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~   98 (145)
                      +.+....|...|.....+..|+..|.++++|.|.  .|++.|.....|..|++.|.+  .++|.|..|++.|.....|..
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG--HRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC--CCCEECSSSSCEESSHHHHHH
T ss_pred             eeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC--CCCccCCCCCcccCCHHHHHH
Confidence            3344444888899999999999999999999997  599999999999999999999  789999999999999999999


Q ss_pred             HHHHhc
Q psy16400         99 HIRKYH  104 (145)
Q Consensus        99 H~~~h~  104 (145)
                      |+++|.
T Consensus        84 H~~~H~   89 (89)
T 2wbs_A           84 HMKRHF   89 (89)
T ss_dssp             HGGGGC
T ss_pred             HHHhhC
Confidence            999874

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.43  E-value=1.6e-13  Score=75.91  Aligned_cols=56  Identities=30%  Similarity=0.567  Sum_probs=53.2

Q ss_pred             ceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD--VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS--CCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC--CCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58899999999999999999999999  889999999999999999999999999876

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=3.3e-13  Score=82.17  Aligned_cols=62  Identities=21%  Similarity=0.257  Sum_probs=57.2

Q ss_pred             CceecccccccccChhhHHHHhhh-hcCCCCCC--------cccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVF-ECGGKEPV--------HQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~-h~~~~~k~--------~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      ..+.|..|++.|.....|..|++. |.+  .++        |.|..|++.|.....|..|+++|++++||.|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~--~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVG--GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTC--CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccC--CCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            346799999999999999999998 887  556        89999999999999999999999999999986

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.41  E-value=8.5e-14  Score=82.88  Aligned_cols=75  Identities=21%  Similarity=0.364  Sum_probs=66.9

Q ss_pred             ceec--ccccccccChhhHHHHhhhhcCCCCCCcccCC--CccccCCchhHHHHHHHhcCCCcccCCC---CCCCCCCCC
Q psy16400         50 QYSC--QHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH--CDYRAKQSGNLRVHIRKYHTSIELQSPS---PAPRKPIVN  122 (145)
Q Consensus        50 ~~~C--~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~kp~~c~~---c~~~~~~~~  122 (145)
                      +|.|  ..|++.|.....|..|++.|.+  .++|.|..  |++.|.....|..|+++|++   |.|..   |+..|....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ--QLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC--CCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHH
Confidence            5889  8899999999999999999999  78999988  99999999999999999998   99999   999888776


Q ss_pred             Cchhhhh
Q psy16400        123 PMQTQQQ  129 (145)
Q Consensus       123 ~~~~~~~  129 (145)
                      .|..|..
T Consensus        76 ~l~~H~~   82 (85)
T 2j7j_A           76 LYLKHVA   82 (85)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6666543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=6.2e-14  Score=88.42  Aligned_cols=90  Identities=16%  Similarity=0.094  Sum_probs=78.1

Q ss_pred             cccccchhhhccccCCCCCCCcee--ccCCCcee-cccccccc--cChhhHHHHhhhhcCCCCCCcccCCCccccCCchh
Q psy16400         21 FTAALSTLARFHWLNWDPNPKYVR--TTQENQYS-CQHCGKRY--RWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGN   95 (145)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~k~~~-C~~c~~~f--~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~   95 (145)
                      .+..|..|...|.....+..|++.  |.+.+++. |..|++.|  .....|..|++.|.+  +++|.|..|++.|.....
T Consensus        18 ~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~--~~~~~C~~C~k~f~~~~~   95 (115)
T 2dmi_A           18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA--QKVLKCMYCGHSFESLQD   95 (115)
T ss_dssp             CSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCC--CSSCBCSSSCCBCSSHHH
T ss_pred             CCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCC--CcceECCCCCCccCCHHH
Confidence            345677899999999999999998  77777665 99999999  889999999999999  889999999999999999


Q ss_pred             HHHHHHHhcCCCcccCC
Q psy16400         96 LRVHIRKYHTSIELQSP  112 (145)
Q Consensus        96 l~~H~~~h~~~kp~~c~  112 (145)
                      |..|++.|+......++
T Consensus        96 L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           96 LSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             HHHHHHHTTTTTCSCCC
T ss_pred             HHHHHHHhCCcccCCCC
Confidence            99999998876655443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.2e-12  Score=75.90  Aligned_cols=62  Identities=26%  Similarity=0.483  Sum_probs=56.1

Q ss_pred             CceeccCCCceecc--cccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhc
Q psy16400         41 KYVRTTQENQYSCQ--HCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        41 ~~~~~~~~k~~~C~--~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      ...++.++++|.|.  .|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+++|+
T Consensus        10 ~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             hhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC--CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34556889999997  599999999999999999999  789999999999999999999998874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.1e-12  Score=73.32  Aligned_cols=56  Identities=20%  Similarity=0.361  Sum_probs=51.3

Q ss_pred             CceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHH-HHhcCC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHI-RKYHTS  106 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~-~~h~~~  106 (145)
                      ++|.|..|++.|.....|..|++.|.+  .++|.|..|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN--EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS--SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCC--CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            479999999999999999999999999  78999999999999999999997 567765

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=3.1e-13  Score=79.60  Aligned_cols=74  Identities=16%  Similarity=0.249  Sum_probs=65.7

Q ss_pred             cCCCCcccccchhhhccccCCCCCCCce-eccCCCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccCCCccccC
Q psy16400         16 FPRGVFTAALSTLARFHWLNWDPNPKYV-RTTQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAK   91 (145)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~   91 (145)
                      ++...+...+..|...|.....+..|+. .|+++++|.|.+  |++.|.....|..|++.|.+  +++|.|..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD--TRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHT--SCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCC--CCCeeCCCCCCCCC
Confidence            4445566666669999999999999999 799999999999  99999999999999999999  88999999999873

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3.1e-13  Score=83.23  Aligned_cols=73  Identities=10%  Similarity=0.060  Sum_probs=63.7

Q ss_pred             ccChhhHHHHhhhhcCCCCCCcccCCCccccC-CchhHHHHHHHhcC-CCcccCCCCCCCCCCCCCchhhhhhcccC
Q psy16400         60 YRWKSTLKRHEVFECGGKEPVHQCPHCDYRAK-QSGNLRVHIRKYHT-SIELQSPSPAPRKPIVNPMQTQQQASNLS  134 (145)
Q Consensus        60 f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~-~~~~l~~H~~~h~~-~kp~~c~~c~~~~~~~~~~~~~~~~~~~~  134 (145)
                      +.....+..|++.|.+  .++|.|..|++.|. ....|..|+++|++ +++|.|..|++.|.....|..|.......
T Consensus         6 ~~~~~~~~~h~~~h~~--~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHE--RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CCCCCSCSHHHHTTTT--TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             CCCCCcHHHHHHHhcc--CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            4445556789999999  88999999999999 99999999999999 99999999999999998888887665543

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.30  E-value=1.5e-12  Score=69.00  Aligned_cols=44  Identities=20%  Similarity=0.176  Sum_probs=28.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTG--EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSS--SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCC--CCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555666  5566666666666666666666666666666666654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.28  E-value=2.7e-12  Score=67.94  Aligned_cols=44  Identities=18%  Similarity=0.194  Sum_probs=29.9

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |+++|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTG--EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCC--CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCC--CCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555666  5567777777777777777777777777777777655

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.7e-12  Score=73.24  Aligned_cols=60  Identities=18%  Similarity=0.429  Sum_probs=54.4

Q ss_pred             ccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC-CCccccCCchhHHHHHHHhcCCCc
Q psy16400         45 TTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP-HCDYRAKQSGNLRVHIRKYHTSIE  108 (145)
Q Consensus        45 ~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~-~C~~~f~~~~~l~~H~~~h~~~kp  108 (145)
                      .-++++|.|..|++.|. ...|..|++. .+  +++|.|. .|++.|.....|..|+++|...++
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~--~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CP--RLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CS--SSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cC--CcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            35788999999999999 9999999998 88  8899999 999999999999999999887654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.8e-12  Score=68.51  Aligned_cols=44  Identities=25%  Similarity=0.233  Sum_probs=27.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTG--ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSC--CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCC--CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455555  5566666666666666666666666666666666554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.8e-12  Score=68.63  Aligned_cols=44  Identities=14%  Similarity=0.038  Sum_probs=27.2

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTG--VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSC--CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCC--CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455555  5566666666666666666666666666666666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.6e-12  Score=68.81  Aligned_cols=44  Identities=18%  Similarity=0.119  Sum_probs=25.9

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |+++|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTG--ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSC--CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCC--CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4445555  4566666666666666666666666666666666544

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.7e-12  Score=78.90  Aligned_cols=70  Identities=13%  Similarity=0.125  Sum_probs=62.6

Q ss_pred             cccChhhHHHHhhhhcCCCCCCcccCCCcccc-CCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhh-hhhc
Q psy16400         59 RYRWKSTLKRHEVFECGGKEPVHQCPHCDYRA-KQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQ-QQAS  131 (145)
Q Consensus        59 ~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f-~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~-~~~~  131 (145)
                      .|.....|..|+..+.+  .++|.|..|++.| .....|..|+++| ++++|.|..|++.|.....|..| ...+
T Consensus        15 ~~~~~~~~~~~~~~~~~--~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVD--KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             SSCTTCHHHHHHHHHHH--TSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCchHHHHHHHHhcC--CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            45667788899999988  7899999999999 9999999999999 99999999999999999888888 4443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=68.57  Aligned_cols=44  Identities=18%  Similarity=0.152  Sum_probs=27.1

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTG--EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSC--CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCC--CCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4455555  5566666666666666666666666666666666554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.2e-12  Score=68.29  Aligned_cols=44  Identities=16%  Similarity=0.097  Sum_probs=27.6

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |+++|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTG--EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSS--SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCC--CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455555  5566666666666666666666666666666666554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=68.61  Aligned_cols=44  Identities=18%  Similarity=0.138  Sum_probs=25.1

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTG--ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCS--SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCC--CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4445555  4456665566666666666666656666666655544

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.5e-12  Score=67.95  Aligned_cols=44  Identities=18%  Similarity=0.208  Sum_probs=26.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTG--EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSS--CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCC--CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4455555  5566666666666666666666666666666666554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.3e-12  Score=68.19  Aligned_cols=44  Identities=18%  Similarity=0.129  Sum_probs=27.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |+++|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTG--EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSS--CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCC--CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555555  5566666666666666666666666666666666544

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2e-12  Score=68.38  Aligned_cols=44  Identities=20%  Similarity=0.182  Sum_probs=26.7

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSG--EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSS--SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCC--CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4455555  5566666666666666666666666666666666554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.4e-12  Score=67.46  Aligned_cols=43  Identities=19%  Similarity=0.187  Sum_probs=27.8

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         2 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSG--EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSS--CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCC--CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555  5566666666666666666666666666666666654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.9e-12  Score=68.57  Aligned_cols=44  Identities=16%  Similarity=0.207  Sum_probs=24.9

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSG--ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSC--CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCC--CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4445555  4455555555555555555566555555555555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=68.93  Aligned_cols=44  Identities=16%  Similarity=0.110  Sum_probs=22.1

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTG--KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSC--CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCC--CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3344444  4455555555555555555555555555555555443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.4e-12  Score=68.12  Aligned_cols=44  Identities=18%  Similarity=0.161  Sum_probs=25.8

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSG--EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCC--CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCC--CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4445555  4556666666666666666666666666666666544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.26  E-value=1.6e-12  Score=68.76  Aligned_cols=44  Identities=16%  Similarity=0.153  Sum_probs=22.9

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTG--EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTT--SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCC--CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444  4455555555555555555555555555555555443

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=68.73  Aligned_cols=43  Identities=21%  Similarity=0.196  Sum_probs=20.6

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTG--EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCSS--CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCcCC--CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            344444  4444554455555555555555544555555544443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=68.49  Aligned_cols=44  Identities=20%  Similarity=0.176  Sum_probs=26.6

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTG--EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCC--CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCC--CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4455555  5566666666666666666666666666666666554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.5e-12  Score=68.00  Aligned_cols=44  Identities=18%  Similarity=0.163  Sum_probs=28.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTG--EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCC--CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCC--CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455555  5566666666666666666666666666666666654

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.2e-12  Score=68.27  Aligned_cols=44  Identities=18%  Similarity=0.188  Sum_probs=25.8

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTG--EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSC--CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCC--CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4445555  5566666666666666666666666666666666544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=68.54  Aligned_cols=44  Identities=20%  Similarity=0.165  Sum_probs=22.8

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTG--EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCC--CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCC--CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444  4455555555555555555555555555555555443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=68.51  Aligned_cols=44  Identities=23%  Similarity=0.231  Sum_probs=24.8

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTG--EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCC--CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCC--CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444555  4455555555555555555555555555555555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.25  E-value=1.8e-12  Score=68.58  Aligned_cols=44  Identities=23%  Similarity=0.269  Sum_probs=22.3

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMG--EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCC--CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCC--CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3444444  4455555555555555555555555555555555443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=67.98  Aligned_cols=44  Identities=18%  Similarity=0.126  Sum_probs=25.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |+++|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTG--EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCC--CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCC--CCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4445555  4556666666666666666666666666666665544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.9e-12  Score=67.73  Aligned_cols=44  Identities=20%  Similarity=0.106  Sum_probs=25.4

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSG--EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCC--CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCC--CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4445555  4556666666666666666666666666666665544

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.25  E-value=1.6e-12  Score=68.74  Aligned_cols=44  Identities=23%  Similarity=0.294  Sum_probs=22.3

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG--VKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSS--CCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            44445555555555555555555555555555554  445555443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.9e-12  Score=67.37  Aligned_cols=44  Identities=16%  Similarity=0.113  Sum_probs=27.6

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTG--EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSS--CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCC--CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445555  5566666666666666666666666666666666654

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2e-12  Score=68.43  Aligned_cols=42  Identities=14%  Similarity=0.193  Sum_probs=20.6

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPS  113 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~  113 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         4 ~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            4 GSSGTG--GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSS--SCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccCC--CCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344444  444555555555555555555555555555555443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2e-12  Score=68.37  Aligned_cols=44  Identities=16%  Similarity=0.132  Sum_probs=22.6

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTG--EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTC--CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCC--CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3344444  4455555555555555555555555555555555443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.2e-12  Score=67.67  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=24.9

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAG--EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSC--CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCC--CCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3444555  4455565566666655566666555555566655544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2e-12  Score=68.43  Aligned_cols=44  Identities=18%  Similarity=0.163  Sum_probs=22.2

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSS--TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCC--SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCC--CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444  4455555555555555555555555555555555443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.6e-12  Score=67.96  Aligned_cols=44  Identities=18%  Similarity=0.167  Sum_probs=23.6

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTG--EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCC--SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCC--CCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3444555  4455555555555555555555555555555555544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=68.16  Aligned_cols=44  Identities=20%  Similarity=0.187  Sum_probs=22.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |+++|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTG--EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSS--CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCC--CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444  4455555555555555555555555555555555443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=67.81  Aligned_cols=44  Identities=20%  Similarity=0.174  Sum_probs=23.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |+++|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSG--EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCS--SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCC--CcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            3444454  4455555555555555555555555555555555543

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.1e-12  Score=68.31  Aligned_cols=43  Identities=23%  Similarity=0.230  Sum_probs=20.9

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSG--EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCC--CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCC--CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344444  4445555555555555555555555555555554443

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=4.5e-12  Score=67.00  Aligned_cols=44  Identities=20%  Similarity=0.055  Sum_probs=25.8

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSR--EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSC--CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCC--CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445555  4556666666666666666666666666666666544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=4.1e-12  Score=67.16  Aligned_cols=44  Identities=16%  Similarity=0.140  Sum_probs=26.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSG--EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCC--CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCC--CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3445555  5566666666666666666666666666666666554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.5e-12  Score=67.52  Aligned_cols=43  Identities=19%  Similarity=0.120  Sum_probs=20.8

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            4 GSSGSV--EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSCCCC--CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCC--CCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            334444  4445555555555555555555555555555554443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=8.5e-12  Score=65.96  Aligned_cols=46  Identities=22%  Similarity=0.301  Sum_probs=43.0

Q ss_pred             CCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         39 NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        39 ~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      ++|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR--EKSSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHS--TTSSCCSCC
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcC--CCCCCCCCC
Confidence            3688999999999999999999999999999999999  889999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.23  E-value=3.4e-12  Score=67.56  Aligned_cols=43  Identities=19%  Similarity=0.157  Sum_probs=22.8

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAG--VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCC--CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444  4455555555555555555555555555555555443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.23  E-value=2.6e-12  Score=67.90  Aligned_cols=44  Identities=32%  Similarity=0.611  Sum_probs=22.3

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG--EKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTS--CCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            44445555555555555555555555555555554  445555443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=3.1e-12  Score=67.64  Aligned_cols=44  Identities=25%  Similarity=0.432  Sum_probs=21.4

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      |+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTT--CCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            44444455555555555555555555555555444  444444443

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-11  Score=65.46  Aligned_cols=45  Identities=22%  Similarity=0.412  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG--KKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSS--CCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=67.86  Aligned_cols=43  Identities=19%  Similarity=0.189  Sum_probs=22.6

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPS  113 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~  113 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTG--EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSC--CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCC--CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444  445555555555555555555555555555555543

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.23  E-value=1.1e-11  Score=65.54  Aligned_cols=46  Identities=24%  Similarity=0.412  Sum_probs=42.9

Q ss_pred             CCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         39 NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        39 ~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .+|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emk_A            1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS--CCCSSCCCC
T ss_pred             CCCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            3688899999999999999999999999999999999  889999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5e-12  Score=66.87  Aligned_cols=44  Identities=20%  Similarity=0.163  Sum_probs=26.3

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         3 h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSG--EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCS--CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCC--CCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3445555  5566666666666666666666666666666666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1e-11  Score=65.64  Aligned_cols=45  Identities=27%  Similarity=0.400  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHC--SSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3e-12  Score=67.68  Aligned_cols=44  Identities=23%  Similarity=0.265  Sum_probs=21.6

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSG--EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCC--CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCC--CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444  4455555555555555555555555555555555443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=65.38  Aligned_cols=45  Identities=29%  Similarity=0.424  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT--SCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999876

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.22  E-value=1.2e-12  Score=77.82  Aligned_cols=74  Identities=27%  Similarity=0.458  Sum_probs=68.7

Q ss_pred             chhhhccccCCCCCCCceeccCCCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccCC---CccccCCchhHHHHH
Q psy16400         26 STLARFHWLNWDPNPKYVRTTQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCPH---CDYRAKQSGNLRVHI  100 (145)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~---C~~~f~~~~~l~~H~  100 (145)
                      ..|...+.....+..|+++|.++++|.|..  |++.|.....|..|++.|.+     |.|..   |++.|.....|..|+
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~   81 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHV   81 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHH
Confidence            668888888889999999999999999988  99999999999999999986     89999   999999999999999


Q ss_pred             HHhc
Q psy16400        101 RKYH  104 (145)
Q Consensus       101 ~~h~  104 (145)
                      ++|+
T Consensus        82 ~~hh   85 (85)
T 2j7j_A           82 AECH   85 (85)
T ss_dssp             HHCC
T ss_pred             HhcC
Confidence            9874

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.22  E-value=1.1e-11  Score=65.46  Aligned_cols=45  Identities=18%  Similarity=0.129  Sum_probs=41.9

Q ss_pred             HHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         68 RHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        68 ~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      .|++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTG--VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC--CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCC--CCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46788888  8899999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.4e-11  Score=65.00  Aligned_cols=45  Identities=31%  Similarity=0.563  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG--ERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC--CSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999877

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.22  E-value=2.1e-12  Score=77.64  Aligned_cols=60  Identities=13%  Similarity=0.196  Sum_probs=53.4

Q ss_pred             hhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhhccc
Q psy16400         72 FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNL  133 (145)
Q Consensus        72 ~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~  133 (145)
                      .+.+  .++|.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|....+.
T Consensus        22 ~~~~--~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           22 LSAS--AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SCCC--CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCC--CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            3455  67899999999999999999999999999999999999999999999888665554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=65.31  Aligned_cols=46  Identities=22%  Similarity=0.369  Sum_probs=42.7

Q ss_pred             CCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         39 NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        39 ~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .+|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ytj_A            1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK--QKPSGPSSG   46 (46)
T ss_dssp             CCSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC--CCCSSCSCC
T ss_pred             CCcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            3688899999999999999999999999999999999  889999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=65.36  Aligned_cols=45  Identities=27%  Similarity=0.413  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHC--CSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.21  E-value=1.3e-11  Score=65.19  Aligned_cols=45  Identities=27%  Similarity=0.460  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC--CCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.5e-11  Score=64.99  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC--CCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.21  E-value=1.4e-11  Score=65.06  Aligned_cols=45  Identities=24%  Similarity=0.414  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC--CSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            588899999999999999999999999999999999  889999877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.4e-11  Score=65.08  Aligned_cols=45  Identities=24%  Similarity=0.393  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC--CCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            588899999999999999999999999999999999  889999876

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7.5e-12  Score=66.19  Aligned_cols=43  Identities=21%  Similarity=0.252  Sum_probs=27.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPS  113 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~  113 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSG--EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCC--CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCC--CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4455555  556666666666666666666666666666666654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.5e-11  Score=64.95  Aligned_cols=45  Identities=20%  Similarity=0.380  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG--YRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTC--CCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.4e-11  Score=65.07  Aligned_cols=45  Identities=24%  Similarity=0.374  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS--SSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.1e-12  Score=68.32  Aligned_cols=45  Identities=24%  Similarity=0.423  Sum_probs=26.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSS--CCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            455556666666666666666666666666666665  556665554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.4e-11  Score=64.99  Aligned_cols=45  Identities=24%  Similarity=0.381  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG--VKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSC--CCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.5e-11  Score=64.89  Aligned_cols=45  Identities=22%  Similarity=0.324  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC--CCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            588899999999999999999999999999999999  889999887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.4e-11  Score=65.10  Aligned_cols=46  Identities=28%  Similarity=0.415  Sum_probs=42.7

Q ss_pred             CCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         39 NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        39 ~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +.|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ep2_A            1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSS--CCSCCSCCC
T ss_pred             CCCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            3578899999999999999999999999999999999  889999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=65.37  Aligned_cols=45  Identities=20%  Similarity=0.174  Sum_probs=41.8

Q ss_pred             HHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         68 RHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        68 ~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      +|++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTG--EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46778888  8899999999999999999999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.3e-11  Score=65.22  Aligned_cols=45  Identities=20%  Similarity=0.383  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSC--SCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.5e-11  Score=64.85  Aligned_cols=45  Identities=27%  Similarity=0.452  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS--SSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCC--CCCCCCCCC
Confidence            588899999999999999999999999999999999  889999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=1.7e-11  Score=64.72  Aligned_cols=45  Identities=18%  Similarity=0.132  Sum_probs=41.9

Q ss_pred             HHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         68 RHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        68 ~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      .|++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTG--EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCC--CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCC--CcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46788888  8899999999999999999999999999999999876

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=2.9e-12  Score=74.28  Aligned_cols=63  Identities=14%  Similarity=0.083  Sum_probs=55.9

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhhcccC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLS  134 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~~  134 (145)
                      .+.|.+  +++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|.......
T Consensus         6 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSG--EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTT--CCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCC--CCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            456788  789999999999999999999999999999999999999999988888887665443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.6e-11  Score=64.87  Aligned_cols=45  Identities=27%  Similarity=0.419  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSS--CCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=65.01  Aligned_cols=45  Identities=29%  Similarity=0.462  Sum_probs=42.5

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT--CSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  789999877

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.20  E-value=1e-11  Score=79.75  Aligned_cols=82  Identities=15%  Similarity=0.053  Sum_probs=61.2

Q ss_pred             cCCCceeccccccccc------ChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCC
Q psy16400         46 TQENQYSCQHCGKRYR------WKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKP  119 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~------~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~  119 (145)
                      ..++.+.|++|.+.|.      ....|..|+ .|.+  .++|.|..|++.|.....|..|+++|  ++||.|..|++.|.
T Consensus        37 ~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~--~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~  111 (129)
T 2wbt_A           37 PEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKA--ISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFT  111 (129)
T ss_dssp             HHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHH--HCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCS
T ss_pred             hhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCC--CCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccC
Confidence            3456677877776555      445556665 5777  67888888888888888888888888  78888888888888


Q ss_pred             CCCCchhhhhhcc
Q psy16400        120 IVNPMQTQQQASN  132 (145)
Q Consensus       120 ~~~~~~~~~~~~~  132 (145)
                      ....|..|....+
T Consensus       112 ~~~~l~~H~~~h~  124 (129)
T 2wbt_A          112 STDSALDHVCKKH  124 (129)
T ss_dssp             SHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHC
Confidence            8777777665543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.7e-12  Score=67.36  Aligned_cols=44  Identities=30%  Similarity=0.436  Sum_probs=23.2

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG--ERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCS--CCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCC--CCCCCCCCC
Confidence            44455555555555555555555555555555555  445555443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.6e-11  Score=64.81  Aligned_cols=45  Identities=22%  Similarity=0.400  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG--EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCC--SCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  889999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.6e-11  Score=64.82  Aligned_cols=45  Identities=24%  Similarity=0.392  Sum_probs=42.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD--DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCS--CCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.7e-11  Score=64.79  Aligned_cols=45  Identities=27%  Similarity=0.423  Sum_probs=42.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSC--SSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=64.92  Aligned_cols=45  Identities=31%  Similarity=0.496  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCC--CCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  789999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.19  E-value=1.9e-11  Score=64.52  Aligned_cols=45  Identities=18%  Similarity=0.300  Sum_probs=42.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS--SSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCC--CCCcCCCCC
Confidence            578899999999999999999999999999999999  889999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.9e-12  Score=66.48  Aligned_cols=44  Identities=18%  Similarity=0.114  Sum_probs=24.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHH-HhcCCCcccCCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR-KYHTSIELQSPSP  114 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~kp~~c~~c  114 (145)
                      |++.|.+  +++|.|..|++.|.....|..|++ +|++++||.|..|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTG--KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCC--CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCC--CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3444555  445555555555555555555555 5555555555544

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.6e-11  Score=64.79  Aligned_cols=45  Identities=24%  Similarity=0.385  Sum_probs=42.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG--ENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT--SCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  789999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.9e-11  Score=64.48  Aligned_cols=45  Identities=24%  Similarity=0.419  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCC--CSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            588899999999999999999999999999999999  889999877

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.19  E-value=2e-11  Score=70.58  Aligned_cols=61  Identities=31%  Similarity=0.520  Sum_probs=53.5

Q ss_pred             CceeccCCCceeccc--ccccccChhhHHHHhhhhcCCCCCCcccCC--CccccCCchhHHHHHHHh
Q psy16400         41 KYVRTTQENQYSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCPH--CDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h  103 (145)
                      ........++|.|..  |++.|.....|..|++.|.+  .++|.|.+  |++.|.....|..|+++|
T Consensus         8 ~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG--EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS--SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCCccccCceeCCCCCCccccCCHHHHHHHHHhcCC--CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            344457788999998  99999999999999999999  88999965  999999999999998764

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=64.94  Aligned_cols=45  Identities=27%  Similarity=0.406  Sum_probs=42.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG--GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHS--CCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.2e-11  Score=64.35  Aligned_cols=45  Identities=24%  Similarity=0.441  Sum_probs=42.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG--EKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS--CCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            578889999999999999999999999999999999  889999877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.7e-11  Score=64.13  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=41.1

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE--EKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTS--SCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            56789999999999999999999999999999999  889999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.7e-11  Score=64.73  Aligned_cols=45  Identities=31%  Similarity=0.530  Sum_probs=42.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCC--CCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.9e-11  Score=64.50  Aligned_cols=45  Identities=16%  Similarity=0.075  Sum_probs=41.7

Q ss_pred             HHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         68 RHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        68 ~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      .|++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTG--EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSC--CCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCC--CcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            36778888  8899999999999999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=2.1e-11  Score=64.38  Aligned_cols=45  Identities=18%  Similarity=0.313  Sum_probs=42.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMG--QKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSC--CSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2e-11  Score=64.43  Aligned_cols=45  Identities=24%  Similarity=0.451  Sum_probs=42.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSC--CCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  789999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.18  E-value=2.2e-11  Score=64.34  Aligned_cols=45  Identities=20%  Similarity=0.246  Sum_probs=42.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR--EKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCC--SSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            578889999999999999999999999999999999  889999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.1e-11  Score=64.38  Aligned_cols=45  Identities=27%  Similarity=0.339  Sum_probs=42.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC--SCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.9e-11  Score=64.53  Aligned_cols=45  Identities=22%  Similarity=0.349  Sum_probs=42.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT--CCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.3e-11  Score=64.17  Aligned_cols=45  Identities=20%  Similarity=0.313  Sum_probs=42.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCC--SSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2e-11  Score=64.43  Aligned_cols=45  Identities=27%  Similarity=0.402  Sum_probs=42.0

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT--SCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            688899999999999999999999999999999999  789999764

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2e-11  Score=64.47  Aligned_cols=45  Identities=18%  Similarity=0.156  Sum_probs=41.7

Q ss_pred             HHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         68 RHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        68 ~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      .|++.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTG--EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCC--CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            36778888  8899999999999999999999999999999999876

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.17  E-value=1.1e-11  Score=65.45  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=27.8

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTG--EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCC--CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCC--CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555666  55666666666666666666676666666666665

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.17  E-value=1.4e-13  Score=82.99  Aligned_cols=80  Identities=13%  Similarity=0.126  Sum_probs=72.8

Q ss_pred             cccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHH
Q psy16400         23 AALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      ..|..|...|.....+..|+.+|+++++|.|..|++.|.....|..|+..+++   .+|.|..|++.|.....|..|++.
T Consensus         4 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHH
Confidence            35677889999999999999999999999999999999999999999999875   479999999999999999999998


Q ss_pred             hcC
Q psy16400        103 YHT  105 (145)
Q Consensus       103 h~~  105 (145)
                      +++
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.4e-11  Score=65.12  Aligned_cols=42  Identities=17%  Similarity=0.170  Sum_probs=26.9

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTG--QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCC--SSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCC--CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4555555  55666666666666666666666666666666664

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.7e-11  Score=64.03  Aligned_cols=45  Identities=22%  Similarity=0.372  Sum_probs=42.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG--QRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS--CCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            578889999999999999999999999999999999  889999877

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=63.43  Aligned_cols=41  Identities=17%  Similarity=0.175  Sum_probs=29.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |+++|.+  +++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         1 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSG--EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCS--CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCC--CCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3455666  6677777777777777777777777777777776

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.3e-11  Score=65.18  Aligned_cols=42  Identities=14%  Similarity=0.193  Sum_probs=27.3

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTG--EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCC--CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCC--CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4555666  55666666666666666666666666666666665

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.3e-11  Score=65.12  Aligned_cols=42  Identities=17%  Similarity=0.178  Sum_probs=26.3

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTG--EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSS--CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCC--CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455555  55666666666666666666666666666666664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=65.50  Aligned_cols=42  Identities=19%  Similarity=0.177  Sum_probs=26.4

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTG--EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSS--CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCC--CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455555  55666666666666666666666666666666664

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.16  E-value=1.2e-11  Score=64.05  Aligned_cols=40  Identities=20%  Similarity=0.223  Sum_probs=25.4

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         2 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGSSG--ENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CSSSSS--CCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCC--CCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            445555  5566666666666666666666666666666665

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.6e-11  Score=64.87  Aligned_cols=43  Identities=23%  Similarity=0.295  Sum_probs=28.8

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPS  113 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~  113 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         3 h~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAG--KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCS--SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCC--CCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4555666  556777777777777777777777777777776653

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.16  E-value=9.5e-12  Score=68.14  Aligned_cols=52  Identities=25%  Similarity=0.277  Sum_probs=41.7

Q ss_pred             cccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCccc
Q psy16400         57 GKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQ  110 (145)
Q Consensus        57 ~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  110 (145)
                      ++.|.....|..|++.|.+  +++|.|..|++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQS--EQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTS--SCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCC--CCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3556666777788888888  778888888888888888888888888888773

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.5e-12  Score=75.48  Aligned_cols=66  Identities=18%  Similarity=0.244  Sum_probs=57.5

Q ss_pred             HHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHH-HhcCC-CcccCCCCCCCCCCCCCchhhhhhccc
Q psy16400         66 LKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR-KYHTS-IELQSPSPAPRKPIVNPMQTQQQASNL  133 (145)
Q Consensus        66 l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~-kp~~c~~c~~~~~~~~~~~~~~~~~~~  133 (145)
                      |.+|+++|.+  +++|.|..|++.|.....|..|++ .|.++ ++|.|..|++.|.....|..|....+.
T Consensus         3 ~~~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSG--EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSC--CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCC--CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3468889999  889999999999999999999998 57764 899999999999998888888776554

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.5e-11  Score=63.54  Aligned_cols=45  Identities=24%  Similarity=0.440  Sum_probs=42.1

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG--EKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHC--CCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcC--CCCCCCCCC
Confidence            477889999999999999999999999999999999  889999877

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.3e-11  Score=65.18  Aligned_cols=42  Identities=14%  Similarity=0.225  Sum_probs=26.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTG--EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCS--CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCC--CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4455555  55666666666666666666666666666666654

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.8e-11  Score=64.70  Aligned_cols=42  Identities=19%  Similarity=0.206  Sum_probs=29.1

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSG--KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCC--SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCC--CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556666  56777777777777777777777777777777765

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=65.23  Aligned_cols=42  Identities=19%  Similarity=0.214  Sum_probs=25.2

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTG--EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSS--CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCC--CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455555  55666666666666666666666666666666654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=65.36  Aligned_cols=42  Identities=17%  Similarity=0.119  Sum_probs=24.4

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTG--EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCC--CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCC--CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4445555  45566666666666666666666666666666554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=64.81  Aligned_cols=42  Identities=17%  Similarity=0.168  Sum_probs=27.3

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTG--EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSC--CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCC--CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            4555666  55666666666666666666666666666666664

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=65.36  Aligned_cols=42  Identities=19%  Similarity=0.169  Sum_probs=23.2

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTG--GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSS--SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3444555  44555555555555555555555555555555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=4.5e-11  Score=65.40  Aligned_cols=46  Identities=24%  Similarity=0.430  Sum_probs=24.8

Q ss_pred             ccCCCceecccccccccChhhHHHHhh-hhcCCCCCCcccCCCccccCC
Q psy16400         45 TTQENQYSCQHCGKRYRWKSTLKRHEV-FECGGKEPVHQCPHCDYRAKQ   92 (145)
Q Consensus        45 ~~~~k~~~C~~c~~~f~~~~~l~~h~~-~h~~~~~k~~~C~~C~~~f~~   92 (145)
                      +.++++|.|.+|++.|.....|..|++ .|.+  +++|.|..|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~--~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS--ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCC--CCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCC--CCCccCCCCCCCCCC
Confidence            345555555555555555555555554 4555  445555555555543

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.9e-11  Score=63.51  Aligned_cols=45  Identities=24%  Similarity=0.394  Sum_probs=42.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhh-hhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEV-FECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~-~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++ .|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~--~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG--EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT--SCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCC--CCCCCCCCC
Confidence            57889999999999999999999999999999 9999  789999876

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.7e-11  Score=64.06  Aligned_cols=41  Identities=24%  Similarity=0.254  Sum_probs=27.4

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAG--ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSC--CCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCC--CCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            4555666  5567776677777777777777766766666666

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.6e-11  Score=64.85  Aligned_cols=42  Identities=17%  Similarity=0.175  Sum_probs=25.1

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTG--ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCS--CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCC--CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4445555  55666666666666666666666666666666654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.6e-11  Score=64.10  Aligned_cols=41  Identities=24%  Similarity=0.273  Sum_probs=25.4

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTG--EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSC--CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCC--CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4455555  5566666666666666666666666666666665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=64.98  Aligned_cols=42  Identities=21%  Similarity=0.269  Sum_probs=26.3

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTG--EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCC--CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCC--CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455555  55666666666666666666666666666666664

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.14  E-value=3.9e-12  Score=81.67  Aligned_cols=66  Identities=20%  Similarity=0.306  Sum_probs=58.5

Q ss_pred             CCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         36 WDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        36 ~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      ..+..|. .|+++++|.|..|++.|.....|..|++.|    .++|.|..|++.|.....|..|+++|+++
T Consensus        61 ~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H----~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           61 SYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT----EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT----CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC----CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            3344454 688999999999999999999999999998    34899999999999999999999999986

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=65.12  Aligned_cols=42  Identities=21%  Similarity=0.237  Sum_probs=26.7

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMG--EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCC--CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4455555  55666666666666666666666666666666664

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.3e-11  Score=65.16  Aligned_cols=42  Identities=17%  Similarity=0.130  Sum_probs=25.2

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTG--EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSC--CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCC--CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4445555  55666666666666666666666666666666654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.7e-11  Score=64.81  Aligned_cols=43  Identities=19%  Similarity=0.230  Sum_probs=30.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPS  113 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~  113 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|..
T Consensus         3 h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSG--ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSC--CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCCC--CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4556666  667777777777777777777777777777777653

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.3e-11  Score=65.27  Aligned_cols=42  Identities=17%  Similarity=0.187  Sum_probs=22.2

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTG--ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCC--CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCC--CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444444  44555555555555555555555555555555553

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2e-11  Score=64.47  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=23.4

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTG--ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSS--CCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCC--CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            3444555  44555555555555555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.6e-11  Score=64.89  Aligned_cols=42  Identities=24%  Similarity=0.286  Sum_probs=23.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSG--EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCC--SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCC--CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3444555  44555555555555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.4e-11  Score=64.37  Aligned_cols=41  Identities=17%  Similarity=0.173  Sum_probs=23.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTG--MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSS--SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCC--CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            4444555  4455665566666666666666555555555555

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=1.1e-11  Score=71.36  Aligned_cols=62  Identities=13%  Similarity=0.189  Sum_probs=54.8

Q ss_pred             hcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhhcccCCC
Q psy16400         73 ECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLSTN  136 (145)
Q Consensus        73 h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~~~~  136 (145)
                      +.+  +++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|........+
T Consensus         4 ~~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSS--GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCC--CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            456  77999999999999999999999999999999999999999998888888776665433

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.8e-11  Score=64.67  Aligned_cols=41  Identities=22%  Similarity=0.229  Sum_probs=23.0

Q ss_pred             hhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         72 FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        72 ~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      .|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         6 ~h~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTG--EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTT--CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCC--CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4444  4455555555555555555555555555555555544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.5e-11  Score=64.96  Aligned_cols=42  Identities=17%  Similarity=0.165  Sum_probs=24.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTG--EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCC--SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCC--CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4444555  44556655666666656666665555555665554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6.2e-11  Score=62.54  Aligned_cols=45  Identities=22%  Similarity=0.381  Sum_probs=41.7

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCC--CCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            578899999999999999999999999999999999  889999764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.1e-11  Score=64.44  Aligned_cols=42  Identities=21%  Similarity=0.121  Sum_probs=27.7

Q ss_pred             hhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         71 VFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        71 ~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      +.|.+  +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         5 ~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEG--EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSC--CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCC--CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555  5566676677777766677777666666667766654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.4e-11  Score=64.97  Aligned_cols=41  Identities=20%  Similarity=0.151  Sum_probs=19.7

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      ++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            4 GSSGTG--EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCS--CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCC--CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            334444  44455544555555555555554445555555443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.5e-11  Score=64.86  Aligned_cols=42  Identities=21%  Similarity=0.203  Sum_probs=22.6

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTG--EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCC--CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCC--CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3444444  44555555555555555555555555555555554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.5e-11  Score=72.20  Aligned_cols=59  Identities=19%  Similarity=0.302  Sum_probs=52.4

Q ss_pred             hcCCCCCCcccCCCccccCCchhHHHHHHHhcC---CCcccCCCCCCCCCCCCCchhhhhhccc
Q psy16400         73 ECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT---SIELQSPSPAPRKPIVNPMQTQQQASNL  133 (145)
Q Consensus        73 h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~---~kp~~c~~c~~~~~~~~~~~~~~~~~~~  133 (145)
                      |.+  +++|.|..|++.|.....|..|++.|++   +++|.|..|++.|.....|..|....+.
T Consensus         2 h~~--~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSG--SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCS--CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCC--CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            567  7899999999999999999999999996   8999999999999998888888754444

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=5.2e-11  Score=62.53  Aligned_cols=41  Identities=29%  Similarity=0.558  Sum_probs=26.9

Q ss_pred             hcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCC
Q psy16400         73 ECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPA  115 (145)
Q Consensus        73 h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~  115 (145)
                      |.+  +++|.|..|++.|.....|..|+++|+++++|.|..|+
T Consensus         5 h~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSG--EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSS--CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCC--CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            445  55666666666666666666666666666666666654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=64.65  Aligned_cols=41  Identities=17%  Similarity=0.132  Sum_probs=21.6

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTG--EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSS--CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCC--CcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            344444  44555555555555555555555555555555554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.11  E-value=1.2e-11  Score=68.12  Aligned_cols=53  Identities=9%  Similarity=0.133  Sum_probs=45.9

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhh
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQA  130 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~  130 (145)
                      .++|.|..|++.|.....|..|+++|+++++|.|..|+..|.....|..|...
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999888777766544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.11  E-value=3.1e-11  Score=62.35  Aligned_cols=41  Identities=27%  Similarity=0.292  Sum_probs=26.4

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~--~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGG--ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCS--SCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCC--CCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3445555  5566666666666666666666666666666665

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=64.23  Aligned_cols=42  Identities=21%  Similarity=0.233  Sum_probs=30.2

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTG--EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCC--CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCC--CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5556666  66777777777777777777777777777777765

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=1.5e-11  Score=73.25  Aligned_cols=69  Identities=19%  Similarity=0.265  Sum_probs=60.0

Q ss_pred             HHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCC----CcccCCCCCCCCCCCCCchhhhhhcccCCC
Q psy16400         66 LKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTS----IELQSPSPAPRKPIVNPMQTQQQASNLSTN  136 (145)
Q Consensus        66 l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~----kp~~c~~c~~~~~~~~~~~~~~~~~~~~~~  136 (145)
                      +..|+++|.+  .++|.|..|++.|.....|..|++.++++    ++|.|..|++.|.....|..|.........
T Consensus         3 ~~~H~~~H~~--~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   75 (86)
T 1x6h_A            3 SGSSGRTHTG--EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG   75 (86)
T ss_dssp             TTCCSTTCCC--CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS
T ss_pred             cccccceecC--CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC
Confidence            4578899999  88999999999999999999999988765    799999999999999888888777665433

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.2e-11  Score=62.62  Aligned_cols=42  Identities=14%  Similarity=0.092  Sum_probs=29.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAA--KTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSS--SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCC--CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4455666  56777777777777777777777777777777763

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.2e-11  Score=62.95  Aligned_cols=41  Identities=24%  Similarity=0.238  Sum_probs=23.9

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGG--EKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCS--SCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCC--CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3444555  4566666666666666666666666666666654

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=63.90  Aligned_cols=41  Identities=17%  Similarity=0.165  Sum_probs=24.0

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      ++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTG--EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCC--SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCC--CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555  45566666666666666666666666666666654

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.1e-11  Score=64.03  Aligned_cols=41  Identities=24%  Similarity=0.408  Sum_probs=21.0

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG--SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC--CSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCC--CCCCCC
Confidence            44445555555555555555555555555555555  444443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2e-11  Score=63.79  Aligned_cols=41  Identities=29%  Similarity=0.467  Sum_probs=20.2

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      |+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG--QSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS--SCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC--CCCCCC
Confidence            44444555555555555555555555555554444  444444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.2e-11  Score=63.67  Aligned_cols=41  Identities=12%  Similarity=0.324  Sum_probs=20.7

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA--KSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC--CCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCC
Confidence            44445555555555555555555555555555554  444444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=9.5e-11  Score=61.80  Aligned_cols=44  Identities=27%  Similarity=0.397  Sum_probs=41.0

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG--EKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS--SSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC--CCCCCCCC
Confidence            588899999999999999999999999999999999  88999863

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=8.1e-11  Score=64.37  Aligned_cols=46  Identities=11%  Similarity=0.065  Sum_probs=42.0

Q ss_pred             hcCCCCCCcccCCCccccCCchhHHHHHH-HhcCCCcccCCCCCCCCCC
Q psy16400         73 ECGGKEPVHQCPHCDYRAKQSGNLRVHIR-KYHTSIELQSPSPAPRKPI  120 (145)
Q Consensus        73 h~~~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~kp~~c~~c~~~~~~  120 (145)
                      +.+  .++|.|..|++.|.....|..|++ +|+++++|.|..|++.|..
T Consensus         7 ~~~--~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSV--GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCS--SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCC--CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            455  779999999999999999999997 8999999999999998864

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.1e-11  Score=64.30  Aligned_cols=42  Identities=14%  Similarity=0.130  Sum_probs=24.0

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |++.|.+  .++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTG--EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCC--CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCC--CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4445555  44556655666666666666665556566665554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.8e-11  Score=61.92  Aligned_cols=44  Identities=32%  Similarity=0.477  Sum_probs=41.0

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC--CCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            688899999999999999999999999999999999  88999863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.1e-10  Score=61.47  Aligned_cols=44  Identities=25%  Similarity=0.396  Sum_probs=41.0

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC--CCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            688899999999999999999999999999999999  78999864

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=2.5e-11  Score=62.82  Aligned_cols=40  Identities=23%  Similarity=0.244  Sum_probs=23.3

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++++||.|
T Consensus         3 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGG--EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSS--SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCC--CCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            444555  4556666666666666666666666666666554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-10  Score=61.54  Aligned_cols=44  Identities=27%  Similarity=0.449  Sum_probs=40.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC--CCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            688899999999999999999999999999999999  78999863

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=4.7e-11  Score=63.68  Aligned_cols=38  Identities=13%  Similarity=0.093  Sum_probs=19.9

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPA  115 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~  115 (145)
                      .++|.|..|++.|.....|..|+++|++++||.|..|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            34555555555555555555555555555555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.08  E-value=3e-11  Score=68.11  Aligned_cols=53  Identities=11%  Similarity=0.330  Sum_probs=35.3

Q ss_pred             CCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchh
Q psy16400         38 PNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGN   95 (145)
Q Consensus        38 ~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~   95 (145)
                      +..|+++|+++++|.|..|++.|.....|.   +.|.+  +++|.|..|++.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~--~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPM--TGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETT--TTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCC--CCCEECCCCCCccccCcc
Confidence            456667777777777777777776665554   55666  567777777777665544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-10  Score=61.20  Aligned_cols=44  Identities=30%  Similarity=0.491  Sum_probs=40.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC--CSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-10  Score=61.21  Aligned_cols=44  Identities=32%  Similarity=0.459  Sum_probs=40.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS--CCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC--CCCCCCCC
Confidence            588899999999999999999999999999999999  78999863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-10  Score=61.21  Aligned_cols=44  Identities=25%  Similarity=0.474  Sum_probs=40.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT--CCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC--CCCCCCCC
Confidence            688899999999999999999999999999999999  78999863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=61.36  Aligned_cols=44  Identities=30%  Similarity=0.450  Sum_probs=40.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT--SSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.07  E-value=1.3e-10  Score=61.21  Aligned_cols=44  Identities=25%  Similarity=0.434  Sum_probs=40.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT--SCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1e-10  Score=61.59  Aligned_cols=44  Identities=27%  Similarity=0.439  Sum_probs=40.8

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      ++++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSS--SCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            46788999999999999999999999999999999  889999876

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=61.25  Aligned_cols=44  Identities=18%  Similarity=0.333  Sum_probs=40.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS--SCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.4e-10  Score=61.06  Aligned_cols=44  Identities=30%  Similarity=0.443  Sum_probs=40.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG--ENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS--SCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            588899999999999999999999999999999999  78999864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.2e-10  Score=61.33  Aligned_cols=44  Identities=27%  Similarity=0.483  Sum_probs=40.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS--CCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.4e-10  Score=61.01  Aligned_cols=44  Identities=32%  Similarity=0.480  Sum_probs=40.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSS--CCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCC--CCCcCCCC
Confidence            578899999999999999999999999999999999  78999864

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.9e-11  Score=63.22  Aligned_cols=41  Identities=12%  Similarity=0.050  Sum_probs=21.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTD--SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCC--CCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCC--CCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444444  4455555555555555555555555555555554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.4e-10  Score=61.13  Aligned_cols=44  Identities=27%  Similarity=0.431  Sum_probs=40.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG--ERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC--CCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.1e-10  Score=60.90  Aligned_cols=43  Identities=16%  Similarity=0.139  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         68 RHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        68 ~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      .|+++|.+  +++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTG--ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSS--CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCC--CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            36788888  88999999999999999999999999999999984

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=1.3e-10  Score=60.93  Aligned_cols=43  Identities=26%  Similarity=0.463  Sum_probs=40.2

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCc
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCD   87 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~   87 (145)
                      ..|+++++|.|.+|++.|.....|..|++.|.+  +++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~--~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG--SVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSC--CCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccC--CCCCCCcCCC
Confidence            467899999999999999999999999999999  8899999986

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.4e-10  Score=61.07  Aligned_cols=44  Identities=30%  Similarity=0.437  Sum_probs=40.9

Q ss_pred             CCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         39 NPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        39 ~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .+|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2yto_A            1 GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG--ERHSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC--CCBTTTB
T ss_pred             CCcccccCCCCCEECcccCCccCCHhHHHHHHHHcCC--CCCCCCC
Confidence            3688899999999999999999999999999999999  7899986

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1e-10  Score=61.75  Aligned_cols=41  Identities=22%  Similarity=0.205  Sum_probs=29.6

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHG--ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCC--CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCC--CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            345666  66777777777777777777777777777777775

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.3e-10  Score=61.20  Aligned_cols=44  Identities=32%  Similarity=0.533  Sum_probs=40.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC--SCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            588899999999999999999999999999999999  78999863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.6e-10  Score=60.90  Aligned_cols=44  Identities=25%  Similarity=0.395  Sum_probs=40.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ--ETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS--CCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            688899999999999999999999999999999999  78999863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.4e-10  Score=61.04  Aligned_cols=44  Identities=25%  Similarity=0.344  Sum_probs=40.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCS--SSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999864

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.5e-10  Score=60.92  Aligned_cols=44  Identities=27%  Similarity=0.468  Sum_probs=40.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS--CCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999863

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=5.1e-11  Score=62.88  Aligned_cols=42  Identities=19%  Similarity=0.114  Sum_probs=31.9

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcC-CCcccCC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT-SIELQSP  112 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~-~kp~~c~  112 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQK--EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCC--SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCC--CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566777  6678888888888888888888877877 7888775

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.7e-10  Score=60.12  Aligned_cols=43  Identities=12%  Similarity=0.072  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         68 RHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        68 ~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      .|++.|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHT--RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCC--CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCC--CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            46788888  88999999999999999999999999999999984

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.6e-10  Score=60.17  Aligned_cols=43  Identities=28%  Similarity=0.391  Sum_probs=40.0

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .|+++|+++++|.|..|++.|.....|..|+++|.+  +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG--ESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT--SSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC--CCCCCCC
Confidence            578899999999999999999999999999999999  7899874

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=1.7e-11  Score=69.64  Aligned_cols=59  Identities=14%  Similarity=0.086  Sum_probs=51.3

Q ss_pred             hhhcCCCCCCcccCCCccccCCchhHHHHHHH-h-cCCCcccCCCCCCCCCCCCCchhhhhhc
Q psy16400         71 VFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK-Y-HTSIELQSPSPAPRKPIVNPMQTQQQAS  131 (145)
Q Consensus        71 ~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~-h-~~~kp~~c~~c~~~~~~~~~~~~~~~~~  131 (145)
                      ++|.+  +++|.|..|++.|.....|..|++. | .++++|.|..|++.|.....|..|....
T Consensus         3 ~~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~   63 (66)
T 2drp_A            3 FTKEG--EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII   63 (66)
T ss_dssp             CEEEE--TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             cccCC--CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHH
Confidence            45778  7899999999999999999999998 6 5899999999999998887777765543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.4e-10  Score=61.10  Aligned_cols=44  Identities=30%  Similarity=0.460  Sum_probs=40.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC--SCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCC--CCCCCCCC
Confidence            578899999999999999999999999999999999  78999863

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.2e-11  Score=62.27  Aligned_cols=41  Identities=22%  Similarity=0.145  Sum_probs=21.2

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSG--EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCC--CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCC--CcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3444444  4455555555555555555555555555555543

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.05  E-value=1.7e-10  Score=59.52  Aligned_cols=42  Identities=29%  Similarity=0.505  Sum_probs=38.7

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAG--ESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCC--CCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCC--CCCCCCC
Confidence            56788999999999999999999999999999999  7899874

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=61.46  Aligned_cols=44  Identities=20%  Similarity=0.298  Sum_probs=40.7

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|.+|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR--EKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHH--CCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            45678999999999999999999999999999999  889999877

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.5e-10  Score=59.70  Aligned_cols=41  Identities=29%  Similarity=0.313  Sum_probs=38.5

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      |++.|.+  +++|.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGG--EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCS--CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCC--CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            6778888  8899999999999999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.04  E-value=7.8e-11  Score=68.42  Aligned_cols=59  Identities=12%  Similarity=0.155  Sum_probs=52.4

Q ss_pred             hhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhhcc
Q psy16400         72 FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASN  132 (145)
Q Consensus        72 ~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~  132 (145)
                      .+.+  .++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|...+.
T Consensus        11 ~~~~--~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   69 (74)
T 2lce_A           11 MTHS--DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS   69 (74)
T ss_dssp             CCCC--CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHC
T ss_pred             ccCC--CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcC
Confidence            3455  7799999999999999999999999999999999999999999888888765543

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.8e-10  Score=60.00  Aligned_cols=43  Identities=30%  Similarity=0.392  Sum_probs=40.0

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG--ESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC--SSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCC--CCCCCCC
Confidence            578899999999999999999999999999999999  7899874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.7e-10  Score=60.87  Aligned_cols=44  Identities=32%  Similarity=0.479  Sum_probs=40.6

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG--ERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS--CCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCC--CCCCCCCC
Confidence            477889999999999999999999999999999999  78999863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.1e-10  Score=59.09  Aligned_cols=42  Identities=17%  Similarity=0.314  Sum_probs=38.5

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV--KSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC--CSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCC--CCCCCCC
Confidence            56788999999999999999999999999999999  7899873

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=8.5e-11  Score=71.02  Aligned_cols=70  Identities=14%  Similarity=0.221  Sum_probs=49.0

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhhcccCCCCCCCc
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLSTNQTPVA  141 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (145)
                      ...|.+  +++|.|..|++.|.....|..|+++|++++||.|..|............+..+.....+..|+.
T Consensus        17 ~~~H~~--~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (88)
T 1x6f_A           17 NGPRLQ--NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQESGPS   86 (88)
T ss_dssp             CCSCCC--CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCCCCCCCCCCCCCSSSCCCCCCCCC
T ss_pred             ccccCC--CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHHHHHhhhcccccccccccccCCCC
Confidence            345666  6678888888888888888888888887888888777776666666666665555555555544

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.1e-10  Score=60.44  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=40.7

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS--SCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            578889999999999999999999999999999999  78999863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.2e-10  Score=60.34  Aligned_cols=43  Identities=19%  Similarity=0.353  Sum_probs=40.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG--ERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS--CCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            578899999999999999999999999999999999  7899986

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.02  E-value=1.1e-11  Score=69.90  Aligned_cols=55  Identities=7%  Similarity=-0.016  Sum_probs=47.1

Q ss_pred             HHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchh
Q psy16400         67 KRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQT  126 (145)
Q Consensus        67 ~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~  126 (145)
                      ..|++.|.+  +++|.|..|++.|.....|.   +.|++++||.|..|++.|.....+..
T Consensus         3 ~~h~~~H~~--~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            3 ETDERDSTN--RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCCSSSCCS--SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hhHHHHcCC--CCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccc
Confidence            457888999  88999999999999988876   78999999999999999887665543

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.02  E-value=2.6e-10  Score=59.25  Aligned_cols=39  Identities=23%  Similarity=0.365  Sum_probs=27.8

Q ss_pred             hhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         72 FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        72 ~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      .|.+  +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSG--NGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSS--SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCC--CCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            3555  56777777777777777777777777777777764

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.7e-10  Score=59.38  Aligned_cols=43  Identities=16%  Similarity=0.309  Sum_probs=39.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      +|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR--KSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC--CCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC--CCCCCCC
Confidence            578899999999999999999999999999999999  7799873

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.9e-10  Score=60.57  Aligned_cols=43  Identities=21%  Similarity=0.366  Sum_probs=40.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR--EKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH--TTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC--CCCCCCC
Confidence            578899999999999999999999999999999999  7899986

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2.4e-10  Score=60.80  Aligned_cols=44  Identities=25%  Similarity=0.365  Sum_probs=40.3

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCcc
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDY   88 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~   88 (145)
                      ..+.++++|.|.+|++.|.....|..|++.|.+  +++|.|.+|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSG--EKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCS--CCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCC--CCCccCCCCCC
Confidence            346788999999999999999999999999999  88999999985

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=9e-11  Score=65.28  Aligned_cols=52  Identities=12%  Similarity=0.079  Sum_probs=47.6

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhh
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQA  130 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~  130 (145)
                      ++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|...
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   52 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK   52 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999988888877543

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.3e-10  Score=59.02  Aligned_cols=41  Identities=22%  Similarity=0.451  Sum_probs=38.4

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      |+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG--SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHS--CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCC--CCCCCC
Confidence            67889999999999999999999999999999999  779986

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.2e-10  Score=59.70  Aligned_cols=42  Identities=21%  Similarity=0.407  Sum_probs=39.6

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR--KSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC--CCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCC--CCCCCC
Confidence            678899999999999999999999999999999999  779987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.6e-10  Score=59.52  Aligned_cols=43  Identities=23%  Similarity=0.424  Sum_probs=39.9

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG--EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC--SCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            467889999999999999999999999999999999  7899985

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.1e-11  Score=61.57  Aligned_cols=34  Identities=26%  Similarity=0.388  Sum_probs=16.9

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      +++|.|..|++.|.....|..|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A           10 QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            3445555555555555555555545555555544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=8.6e-11  Score=68.77  Aligned_cols=62  Identities=19%  Similarity=0.214  Sum_probs=56.7

Q ss_pred             CcccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         20 VFTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      .-+..|..|...|.....+..|++.|+++++|.|.+|++.|.....|..|++.|.+  +++|.|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~--~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG--SGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC--CCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC--CCCCCC
Confidence            34566778999999999999999999999999999999999999999999999999  789987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=61.74  Aligned_cols=37  Identities=24%  Similarity=0.320  Sum_probs=19.0

Q ss_pred             CCCcccC--CCccccCCchhHHHHHHHhcCCCcccCCCC
Q psy16400         78 EPVHQCP--HCDYRAKQSGNLRVHIRKYHTSIELQSPSP  114 (145)
Q Consensus        78 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c  114 (145)
                      +++|.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus        10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554  455555555555555555555555555443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.00  E-value=3.3e-10  Score=58.36  Aligned_cols=41  Identities=20%  Similarity=0.316  Sum_probs=38.3

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      |+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~--~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ--SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTC--CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCC--CCCCCC
Confidence            67789999999999999999999999999999999  779986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.7e-10  Score=58.75  Aligned_cols=41  Identities=29%  Similarity=0.493  Sum_probs=38.2

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      |+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG--SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC--CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCC--CCCCCC
Confidence            67788999999999999999999999999999999  779886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.4e-10  Score=59.49  Aligned_cols=43  Identities=26%  Similarity=0.503  Sum_probs=40.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG--KKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC--CCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            578899999999999999999999999999999999  7899985

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.6e-10  Score=58.54  Aligned_cols=42  Identities=31%  Similarity=0.544  Sum_probs=39.3

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG--VSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS--CSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC--CCCCCC
Confidence            688899999999999999999999999999999999  778875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.99  E-value=1.1e-10  Score=64.21  Aligned_cols=52  Identities=15%  Similarity=0.184  Sum_probs=47.2

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhhc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQAS  131 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~  131 (145)
                      ||.|..|++.|.....|..|+++|+++++|.|..|+..|.....|..|....
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   52 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK   52 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHh
Confidence            5899999999999999999999999999999999999999888887776544

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.7e-10  Score=59.92  Aligned_cols=43  Identities=19%  Similarity=0.374  Sum_probs=40.2

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER--TDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH--SCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            578899999999999999999999999999999999  7899885

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.1e-10  Score=67.21  Aligned_cols=67  Identities=21%  Similarity=0.286  Sum_probs=58.8

Q ss_pred             CCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         36 WDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        36 ~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      .++..|...+.+++++.|..|++.|. ...|..|+ .+.+  .+++.|..|++.|.. ..|..|+++|.+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~--~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCG--ARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHH--HCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcC--CCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            56888999999999999999999995 88899999 7888  789999999998774 78899999988764

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.9e-10  Score=59.07  Aligned_cols=34  Identities=26%  Similarity=0.384  Sum_probs=20.0

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      +++|.|..|++.|.....|..|+++|++++||.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4456666666666666666666555666655554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.6e-10  Score=58.79  Aligned_cols=43  Identities=28%  Similarity=0.517  Sum_probs=39.2

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      +.++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG--EKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSS--CCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCC--CCCCCCCC
Confidence            56778999999999999999999999999999999  88999863

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.7e-10  Score=59.11  Aligned_cols=45  Identities=22%  Similarity=0.345  Sum_probs=41.1

Q ss_pred             CCceeccCCCceecc--cccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         40 PKYVRTTQENQYSCQ--HCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~--~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .+.++|+++++|.|.  .|++.|.....|..|++.|.+  +++|.|..|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG--VKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC--CCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            356788999999998  899999999999999999999  889999876

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=5.5e-10  Score=58.22  Aligned_cols=43  Identities=26%  Similarity=0.435  Sum_probs=39.4

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .|.++|+++++|.|.+|++.|.....|..|++.|.+  +++|.|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAG--ESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT--SCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCC--CCCCCCC
Confidence            367888999999999999999999999999999999  7899874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=7.4e-10  Score=58.30  Aligned_cols=43  Identities=21%  Similarity=0.281  Sum_probs=39.2

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      .+++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS--CCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCC--CCCCCCCC
Confidence            46778999999999999999999999999999999  88999863

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.91  E-value=1.1e-09  Score=56.76  Aligned_cols=41  Identities=17%  Similarity=0.396  Sum_probs=37.6

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPH   85 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~   85 (145)
                      ++|+++++|.|..|++.|.....|..|++.|.+  +++|.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHS--DKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC--TTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCC--CCCccCCC
Confidence            467899999999999999999999999999999  88999863

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.88  E-value=1.6e-09  Score=59.04  Aligned_cols=49  Identities=16%  Similarity=0.086  Sum_probs=44.2

Q ss_pred             ccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCc
Q psy16400         31 FHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVH   81 (145)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~   81 (145)
                      .+.....+..|.+.|+++++|.|..|++.|.....|..|++.|++  +++|
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF--AKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT--TSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc--CCCC
Confidence            345667789999999999999999999999999999999999999  7676

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=9.8e-10  Score=62.36  Aligned_cols=54  Identities=9%  Similarity=0.137  Sum_probs=49.0

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCcccCC-CCCCCCCCCCCchhhhhhccc
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSP-SPAPRKPIVNPMQTQQQASNL  133 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~-~c~~~~~~~~~~~~~~~~~~~  133 (145)
                      .++|.|..|++.|. ...|..|+++ ++++||.|. .|++.|.....|..|......
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            67999999999999 9999999999 999999999 999999999999888765443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.5e-09  Score=55.57  Aligned_cols=39  Identities=31%  Similarity=0.584  Sum_probs=36.2

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      ++|+++++|.|..|++.|.....|..|++.|.+  +++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTG--SGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCC--CSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCC--CCCcCC
Confidence            467899999999999999999999999999999  779986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=4.6e-10  Score=64.81  Aligned_cols=56  Identities=21%  Similarity=0.207  Sum_probs=49.1

Q ss_pred             hhcCCCCCCcccC--CCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhh
Q psy16400         72 FECGGKEPVHQCP--HCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQ  129 (145)
Q Consensus        72 ~h~~~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~  129 (145)
                      .+.+  .++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....|..|..
T Consensus        13 ~~~~--~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           13 VVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCCC--CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             cCCC--CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            4556  7799997  599999999999999999999999999999999988777766643

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.6e-09  Score=56.93  Aligned_cols=44  Identities=18%  Similarity=0.355  Sum_probs=38.8

Q ss_pred             CCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         40 PKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        40 ~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      .|+++|+++++|.|..|++.|.....|..|++.|.+. +++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~-~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRG-VKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSC-CTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCC-CCCCCCC
Confidence            5788999999999999999999999999999999871 2488885

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=1.9e-10  Score=69.43  Aligned_cols=58  Identities=16%  Similarity=0.238  Sum_probs=48.7

Q ss_pred             ceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         42 YVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        42 ~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      ..+|+++++|.|.+|++.|.....|..|++.|.+  +++|.|..|.    ....|..|.+.|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~--ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNE--EFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHH--HHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCC--CCCcccchhh----hHHHHHhhhccccc
Confidence            4568999999999999999999999999999999  7899997653    44555667777776

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.81  E-value=2.8e-09  Score=53.95  Aligned_cols=34  Identities=12%  Similarity=0.171  Sum_probs=24.5

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCcccC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQS  111 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c  111 (145)
                      +++|.|..|++.|.....|..|+++|++++||.+
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5577777777777777777777777777777654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=4.5e-09  Score=60.14  Aligned_cols=39  Identities=18%  Similarity=0.143  Sum_probs=31.6

Q ss_pred             hcCCCCCCcccCC--CccccCCchhHHHHH-HHhcCCCcccCCC
Q psy16400         73 ECGGKEPVHQCPH--CDYRAKQSGNLRVHI-RKYHTSIELQSPS  113 (145)
Q Consensus        73 h~~~~~k~~~C~~--C~~~f~~~~~l~~H~-~~h~~~kp~~c~~  113 (145)
                      ..+  +|||.|..  |++.|.+..+|..|+ ++|+++|||.|..
T Consensus        22 ~sG--EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSP--YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCS--SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccC--CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            456  77899864  999999999999997 5788999988864

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.79  E-value=3.4e-10  Score=70.18  Aligned_cols=65  Identities=11%  Similarity=-0.051  Sum_probs=56.8

Q ss_pred             cccccchhhhccccCCCCCCCce-ec---cCCCceecccccccccChhhHHHH-hhhhcCCCCCCcccCCCc
Q psy16400         21 FTAALSTLARFHWLNWDPNPKYV-RT---TQENQYSCQHCGKRYRWKSTLKRH-EVFECGGKEPVHQCPHCD   87 (145)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~k~~~C~~c~~~f~~~~~l~~h-~~~h~~~~~k~~~C~~C~   87 (145)
                      -+..|..|...|.....+..|++ .|   +++++|.|.+|++.|.....|..| ++.|.+  +++|.|.++.
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htg--ekpy~C~~~~   86 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG--EENFKLTMVK   86 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTT--CCCEEEEECC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCC--CCCeeCCccc
Confidence            34567789999999999999997 58   568999999999999999999999 899999  8899997643

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.77  E-value=6.9e-09  Score=50.61  Aligned_cols=32  Identities=28%  Similarity=0.329  Sum_probs=27.4

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCCCccc
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQ  110 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~  110 (145)
                      ++|.|..|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47888889999988889999988898888875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.2e-09  Score=52.52  Aligned_cols=30  Identities=20%  Similarity=0.507  Sum_probs=17.9

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +++|.|..|++.|.....|..|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            455666666666666666666666665554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.73  E-value=1.4e-09  Score=65.76  Aligned_cols=61  Identities=15%  Similarity=0.120  Sum_probs=55.1

Q ss_pred             ccccchhhhccccCCCCCCCcee-ccCCCc--------eecccccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         22 TAALSTLARFHWLNWDPNPKYVR-TTQENQ--------YSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~k~--------~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      ...+..|...|.....+..|++. |.++++        |.|..|++.|.....|..|+++|++  +++|.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG--EKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT--CCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC--CCCCCCC
Confidence            34577899999999999999998 998887        9999999999999999999999999  8899985

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.69  E-value=4.9e-09  Score=60.26  Aligned_cols=51  Identities=18%  Similarity=0.253  Sum_probs=45.3

Q ss_pred             CCCcccCC--CccccCCchhHHHHHHHhcCCCcccCCC--CCCCCCCCCCchhhh
Q psy16400         78 EPVHQCPH--CDYRAKQSGNLRVHIRKYHTSIELQSPS--PAPRKPIVNPMQTQQ  128 (145)
Q Consensus        78 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~kp~~c~~--c~~~~~~~~~~~~~~  128 (145)
                      .++|.|..  |++.|.....|..|+++|+++++|.|..  |++.|.....|..|.
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence            67899988  9999999999999999999999999965  999988777666654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.67  E-value=1.4e-08  Score=49.72  Aligned_cols=31  Identities=29%  Similarity=0.380  Sum_probs=20.2

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCc
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIE  108 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  108 (145)
                      +++|.|..|++.|.....|..|++.|++++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5566666666666666666666666666553

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.7e-09  Score=63.22  Aligned_cols=70  Identities=20%  Similarity=0.246  Sum_probs=58.3

Q ss_pred             hhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhhhcccCCCCC
Q psy16400         64 STLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQASNLSTNQT  138 (145)
Q Consensus        64 ~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~  138 (145)
                      ..|..|+..+.+  .+++.|..|++.|. ...|..|+ .+.+++|+.|..|++.+. ...|..|...+.....+.
T Consensus         3 ~~L~~H~~~~c~--~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~~~~   72 (75)
T 2d9k_A            3 SGSSGHEETECP--LRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREGSGP   72 (75)
T ss_dssp             CCCSCCCCCCCC--CCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBSSSC
T ss_pred             hHHHhhCcccCC--CcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCcCCC
Confidence            346678888899  88999999999995 88999999 899999999999999765 578888887776654443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.66  E-value=8.4e-09  Score=51.35  Aligned_cols=34  Identities=26%  Similarity=0.417  Sum_probs=16.2

Q ss_pred             hhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         70 EVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        70 ~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      ++.|.+  +++|.|..|++.|.....|..|+++|++
T Consensus         3 ~~~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            3 TRGSTG--IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSTTCC--SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCcCCC--CCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            334444  4445555555555555555555444443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.66  E-value=1.7e-08  Score=50.94  Aligned_cols=37  Identities=16%  Similarity=0.305  Sum_probs=33.3

Q ss_pred             ccCCCceecccccccccChhhHHHHhhhhcCCCCCCccc
Q psy16400         45 TTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQC   83 (145)
Q Consensus        45 ~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C   83 (145)
                      |+++++|.|..|++.|.....|..|++.|.+  +++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR--DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC--SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC--Ccccee
Confidence            5788999999999999999999999999999  778865

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=2.6e-08  Score=49.52  Aligned_cols=33  Identities=21%  Similarity=0.354  Sum_probs=31.2

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|+++++|.|..|++.|.....|..|++.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            467899999999999999999999999999998

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.62  E-value=1.8e-08  Score=49.43  Aligned_cols=30  Identities=13%  Similarity=0.224  Sum_probs=16.0

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +++|.|..|++.|.....|..|+++|++++
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            445555555555555555555555555544

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.60  E-value=3.7e-08  Score=48.93  Aligned_cols=35  Identities=14%  Similarity=0.276  Sum_probs=32.8

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      |.++|+++++|.|..|++.|.....|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            67889999999999999999999999999999876

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=3.7e-08  Score=49.26  Aligned_cols=32  Identities=22%  Similarity=0.449  Sum_probs=23.5

Q ss_pred             CCCcccC--CCccccCCchhHHHHHHHhcCCCcc
Q psy16400         78 EPVHQCP--HCDYRAKQSGNLRVHIRKYHTSIEL  109 (145)
Q Consensus        78 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~kp~  109 (145)
                      +++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5577777  4777777777777777777777765

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.55  E-value=6.5e-08  Score=47.36  Aligned_cols=32  Identities=16%  Similarity=0.360  Sum_probs=30.1

Q ss_pred             eccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +|+++++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            46889999999999999999999999999988

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=5.9e-08  Score=49.12  Aligned_cols=29  Identities=24%  Similarity=0.573  Sum_probs=18.8

Q ss_pred             CCCcccCC--CccccCCchhHHHHHHHhcCC
Q psy16400         78 EPVHQCPH--CDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      ++||.|..  |++.|.....|..|+++|+++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            55666654  666666666666666666654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.53  E-value=7.1e-08  Score=47.12  Aligned_cols=32  Identities=22%  Similarity=0.371  Sum_probs=29.9

Q ss_pred             eccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +|+++++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            36789999999999999999999999999988

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=6.5e-08  Score=55.33  Aligned_cols=40  Identities=18%  Similarity=0.276  Sum_probs=35.5

Q ss_pred             eccCCCceeccc--ccccccChhhHHHHh-hhhcCCCCCCcccCC
Q psy16400         44 RTTQENQYSCQH--CGKRYRWKSTLKRHE-VFECGGKEPVHQCPH   85 (145)
Q Consensus        44 ~~~~~k~~~C~~--c~~~f~~~~~l~~h~-~~h~~~~~k~~~C~~   85 (145)
                      ..+|++||.|.+  |++.|....+|..|+ ++|++  +|||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg--EKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS--DLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS--CCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC--CCCccccc
Confidence            448999999976  999999999999997 68999  88999864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=6.2e-08  Score=48.11  Aligned_cols=29  Identities=24%  Similarity=0.505  Sum_probs=18.0

Q ss_pred             CCCcccCCCccccCCc-hhHHHHHHHhcCC
Q psy16400         78 EPVHQCPHCDYRAKQS-GNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~-~~l~~H~~~h~~~  106 (145)
                      +++|.|..|++.|... ..|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            4566666666666666 6666666666554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=7.9e-08  Score=47.31  Aligned_cols=29  Identities=34%  Similarity=0.687  Sum_probs=16.7

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      +++|.|..|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44555555555555555555555555554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=1.1e-07  Score=46.78  Aligned_cols=29  Identities=24%  Similarity=0.425  Sum_probs=18.1

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      .++|.|..|++.|.....|..|+++|+++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            45666666666666666666666666654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=7.4e-08  Score=47.51  Aligned_cols=29  Identities=24%  Similarity=0.644  Sum_probs=16.2

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      .++|.|..|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            44555555555555555555555555544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.5e-07  Score=46.30  Aligned_cols=29  Identities=21%  Similarity=0.382  Sum_probs=18.5

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      .++|.|..|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45666666666666666666666666654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=7e-08  Score=47.61  Aligned_cols=31  Identities=16%  Similarity=0.440  Sum_probs=15.0

Q ss_pred             ccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         45 TTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        45 ~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      |+++++|.|..|++.|.....|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            3444445555555555555555555444443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.8e-07  Score=46.50  Aligned_cols=32  Identities=25%  Similarity=0.344  Sum_probs=17.8

Q ss_pred             eccCCCceecccccccccChhhHHHH-hhhhcC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRH-EVFECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h-~~~h~~   75 (145)
                      +|+++++|.|..|++.|.....|..| ++.|.+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            34555555555555555555555555 555543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=2.6e-07  Score=45.36  Aligned_cols=33  Identities=21%  Similarity=0.370  Sum_probs=30.5

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .+|+++++|.|..|++.|.....|..|++.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            357889999999999999999999999999987

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=9.8e-08  Score=47.51  Aligned_cols=34  Identities=21%  Similarity=0.373  Sum_probs=30.3

Q ss_pred             hhhcCCCCCCcccCCCccccCCchhHHHH-HHHhcCC
Q psy16400         71 VFECGGKEPVHQCPHCDYRAKQSGNLRVH-IRKYHTS  106 (145)
Q Consensus        71 ~~h~~~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~~  106 (145)
                      +.|.+  +++|.|..|++.|.....|..| ++.|+++
T Consensus         2 ~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSS--GHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSS--SCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCC--CcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            45777  7899999999999999999999 8889875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.39  E-value=2.4e-07  Score=46.14  Aligned_cols=35  Identities=17%  Similarity=0.367  Sum_probs=31.7

Q ss_pred             ccCCCceecc--cccccccChhhHHHHhhhhcCCCCCCc
Q psy16400         45 TTQENQYSCQ--HCGKRYRWKSTLKRHEVFECGGKEPVH   81 (145)
Q Consensus        45 ~~~~k~~~C~--~c~~~f~~~~~l~~h~~~h~~~~~k~~   81 (145)
                      |+++++|.|.  .|++.|.....|..|++.|.+  +++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~--~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM--TLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT--TTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC--CCCC
Confidence            5788999999  599999999999999999999  6676

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=2.1e-07  Score=46.06  Aligned_cols=33  Identities=21%  Similarity=0.302  Sum_probs=30.6

Q ss_pred             eeccCCCceecccccccccCh-hhHHHHhhhhcC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWK-STLKRHEVFECG   75 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~-~~l~~h~~~h~~   75 (145)
                      ++|+++++|.|..|++.|... ..|..|++.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            457899999999999999999 999999999987

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.38  E-value=7.7e-09  Score=50.05  Aligned_cols=30  Identities=30%  Similarity=0.549  Sum_probs=19.7

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCCcc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSIEL  109 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  109 (145)
                      +|.|..|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            566666666666666666666666666655

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=5.9e-08  Score=55.44  Aligned_cols=57  Identities=14%  Similarity=0.099  Sum_probs=49.5

Q ss_pred             cccccchhhhccccCCCCCCCceeccCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCC
Q psy16400         21 FTAALSTLARFHWLNWDPNPKYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHC   86 (145)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C   86 (145)
                      .+..+..|...|.....+..       +++|.|..|++.|.....|..|++.|.+  +++|.|..|
T Consensus        17 ~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~--~~~~~C~~C   73 (73)
T 2ctu_A           17 RSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESG--KKTSGPSSG   73 (73)
T ss_dssp             SEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCC--CCCSSCCCC
T ss_pred             CCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcC--CCCCCCCCC
Confidence            44567778888888777765       7899999999999999999999999999  789999887

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.5e-07  Score=45.50  Aligned_cols=33  Identities=24%  Similarity=0.327  Sum_probs=30.4

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ..|+++++|.|..|++.|.....|..|++.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            357899999999999999999999999999987

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.6e-07  Score=46.71  Aligned_cols=32  Identities=16%  Similarity=0.168  Sum_probs=29.6

Q ss_pred             eccCCCceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         44 RTTQENQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .++++++|.|.+  |++.|..+..|..|+++|++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            468899999986  99999999999999999987

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.5e-07  Score=45.49  Aligned_cols=34  Identities=12%  Similarity=0.120  Sum_probs=30.4

Q ss_pred             hhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         72 FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        72 ~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      .|.+  .++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~--~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSS--GLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCC--CCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCC--CCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3566  779999999999999999999999998874

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.8e-07  Score=44.73  Aligned_cols=32  Identities=28%  Similarity=0.627  Sum_probs=30.0

Q ss_pred             eccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +|+++++|.|.+|++.|.....|..|++.|.+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            56889999999999999999999999999987

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=9.4e-08  Score=50.33  Aligned_cols=33  Identities=24%  Similarity=0.354  Sum_probs=17.9

Q ss_pred             hhcCCCCCCcccC--CCccccCCchhHHHHHHHhcCC
Q psy16400         72 FECGGKEPVHQCP--HCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        72 ~h~~~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      .|.+  +++|.|.  .|++.|.....|..|+++|+++
T Consensus        12 ~H~~--~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           12 KEMP--DKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EEET--TTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCC--CCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3455  4455553  4555555555555555555554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.34  E-value=4.4e-07  Score=42.07  Aligned_cols=28  Identities=18%  Similarity=0.308  Sum_probs=20.8

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            6777777777777777777777777653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.34  E-value=4.8e-07  Score=42.17  Aligned_cols=30  Identities=33%  Similarity=0.717  Sum_probs=23.3

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCCCc
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTSIE  108 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp  108 (145)
                      ++|.|..|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            367888888888888888888888877653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.34  E-value=3.7e-07  Score=44.18  Aligned_cols=32  Identities=19%  Similarity=0.403  Sum_probs=29.1

Q ss_pred             CceecccccccccChhhHHHHhhhhcCCCCCCcc
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQ   82 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~   82 (145)
                      ++|.|.+|++.|.....|..|+++|.+  +++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHEL--LGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTT--TCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCC--CCCCC
Confidence            479999999999999999999999999  77774

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=4.1e-07  Score=42.08  Aligned_cols=29  Identities=38%  Similarity=0.757  Sum_probs=22.7

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            36788888888888888888888887764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.33  E-value=2e-07  Score=49.33  Aligned_cols=29  Identities=21%  Similarity=0.291  Sum_probs=15.4

Q ss_pred             CCCcccCCCccccCCchhHHHHHH-HhcCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIR-KYHTS  106 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~  106 (145)
                      +++|.|..|++.|.....|..|++ +|+++
T Consensus         5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            5 DKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             TSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            445555555555555555555555 55544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.33  E-value=3e-07  Score=42.71  Aligned_cols=28  Identities=29%  Similarity=0.479  Sum_probs=19.6

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            5677777777777777777777776653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=3e-07  Score=48.31  Aligned_cols=39  Identities=18%  Similarity=0.466  Sum_probs=34.3

Q ss_pred             CCCCCceeccCCCceecc--cccccccChhhHHHHhhhhcC
Q psy16400         37 DPNPKYVRTTQENQYSCQ--HCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        37 ~~~~~~~~~~~~k~~~C~--~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ....+...|+++++|.|.  .|++.|.....|..|++.|.+
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            344566779999999996  699999999999999999987

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.31  E-value=4.1e-07  Score=45.17  Aligned_cols=29  Identities=24%  Similarity=0.420  Sum_probs=16.1

Q ss_pred             CCCcccC--CCccccCCchhHHHHHHHhcCC
Q psy16400         78 EPVHQCP--HCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      .++|.|.  .|++.|.....|..|+++|+++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4455555  2555555555555555555554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=3.7e-07  Score=42.61  Aligned_cols=28  Identities=18%  Similarity=0.239  Sum_probs=18.7

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3666666777777666677776666654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.31  E-value=2.8e-07  Score=45.98  Aligned_cols=23  Identities=17%  Similarity=0.335  Sum_probs=16.1

Q ss_pred             CCCcccCCCccccCCchhHHHHH
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHI  100 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~  100 (145)
                      ++||.|..|++.|.+.++|..|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            55777777777777777777665

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=4.6e-07  Score=41.96  Aligned_cols=28  Identities=29%  Similarity=0.488  Sum_probs=20.4

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            5777777777777777777777777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.28  E-value=3.8e-07  Score=48.21  Aligned_cols=32  Identities=28%  Similarity=0.625  Sum_probs=29.7

Q ss_pred             eccCCCceecccccccccChhhHHHHhh-hhcC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEV-FECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~-~h~~   75 (145)
                      +|+++++|.|.+|++.|.....|..|++ .|.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            4789999999999999999999999999 8987

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=6.9e-07  Score=43.83  Aligned_cols=32  Identities=19%  Similarity=0.548  Sum_probs=29.6

Q ss_pred             eccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .|.++++|.|..|++.|.....|..|++.|.+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            45788999999999999999999999999987

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=2.3e-06  Score=48.56  Aligned_cols=30  Identities=17%  Similarity=0.256  Sum_probs=20.7

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +++|.|..|++.|.+...|..|+++|+++.
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            557777777777777777777777776653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=8.1e-07  Score=42.31  Aligned_cols=29  Identities=17%  Similarity=0.253  Sum_probs=20.4

Q ss_pred             CCcccC--CCccccCCchhHHHHHHHhcCCC
Q psy16400         79 PVHQCP--HCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        79 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      ++|.|.  .|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            467776  67777777777777777776653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.23  E-value=6e-07  Score=42.51  Aligned_cols=28  Identities=25%  Similarity=0.357  Sum_probs=19.4

Q ss_pred             CcccC--CCccccCCchhHHHHHHHhcCCC
Q psy16400         80 VHQCP--HCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        80 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      ||.|.  .|++.|.....|..|+++|++++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            56675  67777777777777777776653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.22  E-value=9.2e-07  Score=43.82  Aligned_cols=32  Identities=31%  Similarity=0.557  Sum_probs=29.5

Q ss_pred             eccCCCceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         44 RTTQENQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .|+++++|.|.+  |++.|.....|..|++.|.+
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            468899999994  99999999999999999987

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.9e-07  Score=43.52  Aligned_cols=28  Identities=25%  Similarity=0.374  Sum_probs=19.6

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            5677777777777777777777776653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.44  E-value=2.8e-07  Score=43.12  Aligned_cols=28  Identities=25%  Similarity=0.449  Sum_probs=19.6

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            3667777777777777777777777655

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.10  E-value=1.7e-06  Score=39.47  Aligned_cols=25  Identities=20%  Similarity=0.478  Sum_probs=16.1

Q ss_pred             CCcccCCCccccCCchhHHHHHHHh
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3566666666666666666666655

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.09  E-value=1.2e-06  Score=40.82  Aligned_cols=27  Identities=15%  Similarity=0.186  Sum_probs=17.7

Q ss_pred             CcccCCCccccCCchhHHHH-HHHhcCC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVH-IRKYHTS  106 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  106 (145)
                      +|.|..|++.|.....|..| ++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666677777666666666 4566654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.2e-06  Score=40.25  Aligned_cols=25  Identities=20%  Similarity=0.333  Sum_probs=14.4

Q ss_pred             CcccCCCccccCCchhHHHHHHHhc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      +|.|..|++.|.....|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcC
Confidence            5555556666655555555555544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.08  E-value=4e-06  Score=47.54  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=30.8

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcCC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECGG   76 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~   76 (145)
                      ..+.++++|.|.+|++.|.....|..|+++|+++
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            3467899999999999999999999999999983

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.06  E-value=1.5e-06  Score=39.52  Aligned_cols=25  Identities=20%  Similarity=0.337  Sum_probs=13.7

Q ss_pred             cccCCCccccCCchhHHHHHHHhcC
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      |.|..|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            4555555555555555555555543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.2e-06  Score=40.13  Aligned_cols=24  Identities=21%  Similarity=0.506  Sum_probs=13.4

Q ss_pred             CcccCCCccccCCchhHHHHHHHh
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      +|.|..|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            555555555555555555555544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.03  E-value=3e-07  Score=44.15  Aligned_cols=31  Identities=19%  Similarity=0.338  Sum_probs=27.9

Q ss_pred             CceecccccccccChhhHHHHhhhhcCCCCCCc
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVH   81 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~   81 (145)
                      ++|.|.+|++.|.....|..|+++|.+  +++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~--~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFI--VVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSS--SSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHcc--CCCC
Confidence            478999999999999999999999998  6675

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=3.7e-06  Score=38.94  Aligned_cols=28  Identities=21%  Similarity=0.428  Sum_probs=26.0

Q ss_pred             CCceecccccccccChhhHHHHhhhhcC
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            4689999999999999999999999987

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.99  E-value=3.5e-06  Score=41.90  Aligned_cols=26  Identities=27%  Similarity=0.584  Sum_probs=24.6

Q ss_pred             ccCCCceecccccccccChhhHHHHh
Q psy16400         45 TTQENQYSCQHCGKRYRWKSTLKRHE   70 (145)
Q Consensus        45 ~~~~k~~~C~~c~~~f~~~~~l~~h~   70 (145)
                      +.++++|.|.+|++.|.....|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            47899999999999999999999998

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.98  E-value=3.6e-06  Score=38.57  Aligned_cols=28  Identities=36%  Similarity=0.746  Sum_probs=25.1

Q ss_pred             CCceecccccccccChhhHHHHhhhhcC
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +++|.|..|++.|.....|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.96  E-value=5.3e-06  Score=38.20  Aligned_cols=27  Identities=22%  Similarity=0.552  Sum_probs=25.3

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            479999999999999999999999987

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.95  E-value=6.7e-06  Score=37.80  Aligned_cols=27  Identities=22%  Similarity=0.535  Sum_probs=25.2

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            478999999999999999999999987

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.95  E-value=5e-06  Score=37.79  Aligned_cols=27  Identities=30%  Similarity=0.464  Sum_probs=24.3

Q ss_pred             CCceecccccccccChhhHHHHhhhhc
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      +++|.|..|++.|.....|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999998763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.92  E-value=4.5e-06  Score=38.11  Aligned_cols=27  Identities=15%  Similarity=0.278  Sum_probs=24.2

Q ss_pred             CCceecccccccccChhhHHHHhhhhc
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      +++|.|..|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999998763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.13  E-value=1.5e-06  Score=39.28  Aligned_cols=24  Identities=38%  Similarity=0.509  Sum_probs=15.4

Q ss_pred             CcccCCCccccCCchhHHHHHHHh
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      +|.|..|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            566666666666666666666655

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.90  E-value=9.2e-06  Score=38.43  Aligned_cols=28  Identities=29%  Similarity=0.555  Sum_probs=25.9

Q ss_pred             CCceecc--cccccccChhhHHHHhhhhcC
Q psy16400         48 ENQYSCQ--HCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        48 ~k~~~C~--~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +++|.|.  .|++.|.....|..|+++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            4689999  899999999999999999987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.90  E-value=7.7e-06  Score=37.51  Aligned_cols=27  Identities=33%  Similarity=0.742  Sum_probs=25.2

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            479999999999999999999999987

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.86  E-value=9.8e-06  Score=37.40  Aligned_cols=27  Identities=33%  Similarity=0.429  Sum_probs=25.1

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|..|++.|.....|..|++.|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            468999999999999999999999987

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=9e-06  Score=37.21  Aligned_cols=27  Identities=26%  Similarity=0.569  Sum_probs=25.2

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            478999999999999999999999987

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.82  E-value=1.3e-05  Score=37.65  Aligned_cols=27  Identities=33%  Similarity=0.773  Sum_probs=25.0

Q ss_pred             Cceecc--cccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQ--HCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~--~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|.  .|++.|.....|..|+++|.+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            478998  899999999999999999987

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.77  E-value=1e-05  Score=37.15  Aligned_cols=25  Identities=20%  Similarity=0.324  Sum_probs=14.3

Q ss_pred             CcccC--CCccccCCchhHHHHHHHhc
Q psy16400         80 VHQCP--HCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        80 ~~~C~--~C~~~f~~~~~l~~H~~~h~  104 (145)
                      +|.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  55555555555555555554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.76  E-value=1.6e-05  Score=35.82  Aligned_cols=26  Identities=31%  Similarity=0.604  Sum_probs=23.5

Q ss_pred             ceecccccccccChhhHHHHhhhhcC
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            48899999999999999999999876

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.96  E-value=3.5e-06  Score=38.94  Aligned_cols=27  Identities=30%  Similarity=0.525  Sum_probs=24.9

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            478999999999999999999999887

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.94  E-value=3.9e-06  Score=38.96  Aligned_cols=28  Identities=29%  Similarity=0.658  Sum_probs=25.5

Q ss_pred             CCceecccccccccChhhHHHHhhhhcC
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            3689999999999999999999999887

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.70  E-value=1.9e-05  Score=36.52  Aligned_cols=27  Identities=26%  Similarity=0.716  Sum_probs=24.5

Q ss_pred             CceecccccccccChhhHHHH-hhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRH-EVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h-~~~h~~   75 (145)
                      ++|.|..|++.|.....|..| ++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            478999999999999999999 788877

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.85  E-value=5.9e-06  Score=37.19  Aligned_cols=26  Identities=35%  Similarity=0.669  Sum_probs=23.2

Q ss_pred             CceecccccccccChhhHHHHhhhhc
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      ++|.|..|++.|.....|..|++.|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47999999999999999999988763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.60  E-value=4e-05  Score=34.99  Aligned_cols=27  Identities=30%  Similarity=0.777  Sum_probs=24.3

Q ss_pred             Cceecc--cccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQ--HCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~--~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|.  .|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468999  999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.18  E-value=0.00079  Score=37.62  Aligned_cols=52  Identities=19%  Similarity=0.379  Sum_probs=41.1

Q ss_pred             eccc--ccccccChhhHHHHhh-hhcCCC----CCCcccC--CCccccCCchhHHHHHHHh
Q psy16400         52 SCQH--CGKRYRWKSTLKRHEV-FECGGK----EPVHQCP--HCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        52 ~C~~--c~~~f~~~~~l~~h~~-~h~~~~----~k~~~C~--~C~~~f~~~~~l~~H~~~h  103 (145)
                      .|.+  |++.|.+...|..|+. .|.+.+    ...|.|.  .|++.+.....|..|++..
T Consensus         3 ~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            3 KCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4544  9999999999999984 677632    1279996  6998888888999999875

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.26  E-value=0.0013  Score=41.63  Aligned_cols=29  Identities=17%  Similarity=0.232  Sum_probs=17.6

Q ss_pred             eeccCCCceecccccccccChhhHHHHhh
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEV   71 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~   71 (145)
                      ..|+|+++|.|..|++.|.+...|..|++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            33456666666666666666666666654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.34  E-value=0.0028  Score=40.06  Aligned_cols=30  Identities=30%  Similarity=0.414  Sum_probs=26.4

Q ss_pred             hhhcCCCCCCcccCCCccccCCchhHHHHHHH
Q psy16400         71 VFECGGKEPVHQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        71 ~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      ..++|  .++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tG--ekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPG--GGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGG--GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCC--CcceEcccCcchhCCHHHHHHHHhh
Confidence            44677  7799999999999999999999775

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.82  E-value=0.085  Score=33.32  Aligned_cols=22  Identities=18%  Similarity=0.256  Sum_probs=19.1

Q ss_pred             CceecccccccccChhhHHHHh
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHE   70 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~   70 (145)
                      +++.|..|+..|.+...+..|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHH
Confidence            4588999999999998888877

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.57  E-value=0.082  Score=27.33  Aligned_cols=26  Identities=23%  Similarity=0.671  Sum_probs=13.7

Q ss_pred             ceecccccccccChhhHHHHhhhhcC
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .|.|..|+..|.....|+.||....+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             ceeCCcccccccchHHHHhhhhhcCc
Confidence            34555555555555555555554333

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.73  E-value=0.1  Score=26.94  Aligned_cols=28  Identities=21%  Similarity=0.420  Sum_probs=23.9

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      ..|.|+.|+..|.....|..|++..-++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            3699999999999999999999855444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=90.94  E-value=0.31  Score=26.73  Aligned_cols=37  Identities=16%  Similarity=0.143  Sum_probs=27.8

Q ss_pred             cccC--CCccccCCchhHHHHHH-HhcCCC------cccCCCCCCC
Q psy16400         81 HQCP--HCDYRAKQSGNLRVHIR-KYHTSI------ELQSPSPAPR  117 (145)
Q Consensus        81 ~~C~--~C~~~f~~~~~l~~H~~-~h~~~k------p~~c~~c~~~  117 (145)
                      +.|.  .|++.|.....|..|+. .|.+.+      +|.|.+-++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~   47 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCD   47 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCc
Confidence            3453  48999999999999985 687765      7999744443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.72  E-value=0.18  Score=33.16  Aligned_cols=79  Identities=19%  Similarity=0.346  Sum_probs=53.1

Q ss_pred             Cceec--ccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchh
Q psy16400         49 NQYSC--QHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQT  126 (145)
Q Consensus        49 k~~~C--~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~  126 (145)
                      -...|  ..|+..+. ...+..|.. .-.  ..+..|+.|+..+ ....|..|....-..+.-.|..|+..+... .+..
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~-~C~--~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~-~l~~  154 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA-HCE--FALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE-DKEI  154 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT-TCT--TSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG-GHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh-cCC--ceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH-HHHh
Confidence            34456  34665544 456777764 233  4577898898876 555778898877788888999888765544 5666


Q ss_pred             hhhhccc
Q psy16400        127 QQQASNL  133 (145)
Q Consensus       127 ~~~~~~~  133 (145)
                      |.+...+
T Consensus       155 H~~~~~~  161 (170)
T 3hcs_A          155 HDQNCPL  161 (170)
T ss_dssp             HHTTCCC
T ss_pred             HHHhCcC
Confidence            6666554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.70  E-value=0.24  Score=28.52  Aligned_cols=44  Identities=16%  Similarity=0.314  Sum_probs=33.1

Q ss_pred             CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCch
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSG   94 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~   94 (145)
                      -..|.|+.|+..+. +..|..|.....+  ...|.|.-|++.|....
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~--~~~~SCIDC~~~F~~~~   51 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHVSNCRN--CECLSCIDCGKDFWGDD   51 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHHHHCTT--CCEEEETTTTEEEEGGG
T ss_pred             eeEEEcCCCCCeee-cccchhHHhhCCC--CCcEEecccCCeeCCCC
Confidence            34589999997765 6678889766555  45689999999988643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.29  E-value=0.52  Score=22.56  Aligned_cols=25  Identities=24%  Similarity=0.408  Sum_probs=17.9

Q ss_pred             CcccCCCccccCCchhHHHHHHHhc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      .|.|+.|.+.+.....|..|....+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            3777778777777777777766533

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=86.62  E-value=0.33  Score=28.52  Aligned_cols=24  Identities=25%  Similarity=0.443  Sum_probs=12.9

Q ss_pred             cccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      ..|..||+.|.   .|.+|+..++|..
T Consensus        22 iiClecGK~fK---~LkRHL~~~hglt   45 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMT   45 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSC
T ss_pred             eEecccchhhH---HHHHHHHHccCCC
Confidence            45556666555   3445666655543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=83.08  E-value=1.1  Score=29.28  Aligned_cols=57  Identities=16%  Similarity=0.379  Sum_probs=31.4

Q ss_pred             CceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCCCcc
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTSIEL  109 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  109 (145)
                      ++..|..|+..+ .+..|..|......  .+...|..|+..+.. ..+..|...+.|+.++
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~--~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCP--RRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCT--TCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCC--CCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            345566666655 35556666655555  445667777665543 3556676666666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	145
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-04
d2ct1a1	28	g.37.1.1 (A:44-71) Transcriptional repressor CTCF	6e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	7e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.004

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 1e-07
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 3/54 (5%)

Query: 48  ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIR 101
           +  Y CQ CGK +  KS   RH           + C  C  + K   +L  H++
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHL--GLRPYGCGVCGKKFKMKHHLVGHMK 51

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 5e-05
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 46 TQENQYSCQHCGKRYRWKSTLKRHE 70
          + E  Y C  CGK +   S L +H+
Sbjct: 3  SGEKPYGCVECGKAFSRSSILVQHQ 27

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 2e-04
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 46 TQENQYSCQHCGKRYRWKSTLKRHE 70
          + E  Y C  C  R+    T+K H 
Sbjct: 4  SGEKPYECYICHARFTQSGTMKMHI 28

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 3e-04
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 81  HQCPHCDYRAKQSGNLRVHIRKYHT 105
           ++C  C  R  QSG +++HI + HT
Sbjct: 9   YECYICHARFTQSGTMKMHILQKHT 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 2e-04
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 46 TQENQYSCQHCGKRYRWKSTLKRHE 70
          T E  Y+C HC K +R K  L  H 
Sbjct: 4  TGEKPYACSHCDKTFRQKQLLDMHF 28

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 2e-04
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 81  HQCPHCDYRAKQSGNLRVHIRKYHT 105
           + C  C     +  +L  HI++ HT
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHT 30

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 4e-04
 Identities = 8/20 (40%), Positives = 9/20 (45%)

Query: 51 YSCQHCGKRYRWKSTLKRHE 70
          Y CQ CGK +     L  H 
Sbjct: 6  YICQSCGKGFSRPDHLNGHI 25

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.7 bits (78), Expect = 4e-04
 Identities = 4/23 (17%), Positives = 9/23 (39%)

Query: 48 ENQYSCQHCGKRYRWKSTLKRHE 70
          +  + C+ C + +     L  H 
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHI 23

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 6e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 81  HQCPHCDYRAKQSGNLRVHIRKYHT 105
             CPHCD    +  +L VH+RK H+
Sbjct: 3   FHCPHCDTVIARKSDLGVHLRKQHS 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 7e-04
 Identities = 6/20 (30%), Positives = 10/20 (50%)

Query: 51 YSCQHCGKRYRWKSTLKRHE 70
          ++C  C KR+     L +H 
Sbjct: 3  FACPECPKRFMRSDHLSKHI 22

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.0 bits (76), Expect = 7e-04
 Identities = 6/20 (30%), Positives = 11/20 (55%)

Query: 51 YSCQHCGKRYRWKSTLKRHE 70
          + C+ C + +  +  LKRH 
Sbjct: 3  FVCEVCTRAFARQEHLKRHY 22

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.2 bits (71), Expect = 0.004
 Identities = 5/25 (20%), Positives = 8/25 (32%)

Query: 46 TQENQYSCQHCGKRYRWKSTLKRHE 70
          T    + C  C + +     L  H 
Sbjct: 7  TGIKPFQCPDCDRSFSRSDHLALHR 31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	145
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.59
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.28
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.21
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.16
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.1
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.09
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.04
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.04
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.02
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.02
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.01
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.01
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.93
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.92
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.92
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.86
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.83
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.82
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.81
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.78
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.74
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.74
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.71
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.71
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.65
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.62
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.5
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.41
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.41
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.4
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.39
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.29
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.24
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.19
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.14
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.13
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.09
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.05
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.95
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.94
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.9
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.86
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.78
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.7
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.69
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.61
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.48
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.35
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.33
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.27
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.18
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.17
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.08
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.05
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.04
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.02
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.91
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.9
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.88
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.83
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.82
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.78
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.77
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.76
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.7
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.59
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.42
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.36
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.22
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.09
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.07
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.95
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.88
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.3
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.29
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.1
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.03
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.01
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.93
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.82
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.57
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.25
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.04
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.7
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.36
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.2
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.11
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.89
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.96
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.92
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.4
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.26
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.26
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.11
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.7
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.23
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	87.07
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.21
d1y0jb1	36	U-shaped transcription factor, different fingers {	85.74
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	84.94
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	81.19
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	80.6

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.8e-16  Score=83.96  Aligned_cols=53  Identities=30%  Similarity=0.534  Sum_probs=49.9

Q ss_pred             CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHh
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      |++|.|+ ||+.|.....|..|+++|+|  ++||.|..|++.|.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~--ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcccc--ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899995 99999999999999999999  88999999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1e-13  Score=74.85  Aligned_cols=51  Identities=6%  Similarity=0.073  Sum_probs=46.7

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCCcccCCCCCCCCCCCCCchhhhh
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSIELQSPSPAPRKPIVNPMQTQQQ  129 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~~c~~c~~~~~~~~~~~~~~~  129 (145)
                      +|+|.| .||+.|.....|..|+++|+|++||.|..|++.|.....|..|..
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            469999 599999999999999999999999999999999999888877753

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=8.8e-13  Score=65.95  Aligned_cols=35  Identities=14%  Similarity=0.203  Sum_probs=30.8

Q ss_pred             CCCcccCCCccccCCchhHHHHHH-HhcCCCcccCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIR-KYHTSIELQSP  112 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~kp~~c~  112 (145)
                      +|||.|..|++.|....+|..|++ +|+|+|||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            578999999999999999999976 69999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1.2e-12  Score=65.43  Aligned_cols=35  Identities=26%  Similarity=0.607  Sum_probs=17.4

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      |+++|++++||.|.+|++.|....+|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            44444555555555555555555555555544444

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=9e-12  Score=62.12  Aligned_cols=37  Identities=22%  Similarity=0.270  Sum_probs=34.9

Q ss_pred             HHhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         68 RHEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        68 ~h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      +|+++|++  ++||.|..|++.|.+.++|..|+++|+||
T Consensus         2 rH~~~Ht~--ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRE--RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCC--SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCC--CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            57889999  88999999999999999999999999987

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.2e-11  Score=58.46  Aligned_cols=32  Identities=25%  Similarity=0.287  Sum_probs=17.8

Q ss_pred             hcCCCCCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         73 ECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        73 h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      |+|  ++||.|..|++.|.+.+.|..|+++|+||
T Consensus         2 HTg--ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSG--EKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTT--CCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCC--CCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            445  44555555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3.2e-11  Score=56.20  Aligned_cols=29  Identities=28%  Similarity=0.506  Sum_probs=25.5

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      |||.|..|++.|.+.++|..|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58899999999999999999999999885

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.09  E-value=2.6e-11  Score=56.62  Aligned_cols=29  Identities=17%  Similarity=0.288  Sum_probs=24.4

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +||.|.+|++.|.+.+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            47888888888888888888888888875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3.7e-11  Score=57.69  Aligned_cols=32  Identities=31%  Similarity=0.650  Sum_probs=30.9

Q ss_pred             eccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         44 RTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        44 ~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +|+|++||.|.+|++.|.....|..|+++|+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            58999999999999999999999999999998

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=5.6e-11  Score=58.78  Aligned_cols=34  Identities=26%  Similarity=0.427  Sum_probs=17.4

Q ss_pred             HhhhhcCCCCCCcccCCCccccCCchhHHHHHHHhc
Q psy16400         69 HEVFECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        69 h~~~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      |.+.|+|  +|||.|..|++.|.+.++|..|+++|.
T Consensus         2 h~R~HTg--eKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTG--IKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCC--SSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCC--ccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3444555  445555555555555555555555544

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=7.1e-11  Score=57.86  Aligned_cols=32  Identities=16%  Similarity=0.376  Sum_probs=27.4

Q ss_pred             cccCC--CccccCCchhHHHHHHHhcCCCcccCC
Q psy16400         81 HQCPH--CDYRAKQSGNLRVHIRKYHTSIELQSP  112 (145)
Q Consensus        81 ~~C~~--C~~~f~~~~~l~~H~~~h~~~kp~~c~  112 (145)
                      |.|..  |++.|....+|.+|+++|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56754  899999999999999999999999886

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=4.8e-11  Score=59.03  Aligned_cols=35  Identities=14%  Similarity=0.276  Sum_probs=32.8

Q ss_pred             CceeccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         41 KYVRTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        41 ~~~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      |.++|+|++||.|.+|++.|..+.+|..|++.|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=7.4e-11  Score=54.42  Aligned_cols=28  Identities=29%  Similarity=0.419  Sum_probs=21.8

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      +|||.|..|++.|.+.++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3578888888888888888888888775

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=9.3e-11  Score=57.58  Aligned_cols=32  Identities=34%  Similarity=0.683  Sum_probs=16.9

Q ss_pred             hhcCCCCCCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         72 FECGGKEPVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        72 ~h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      +|+|  ++||.|.+|++.|.+.++|..|+++|++
T Consensus         2 ~HTg--ekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTG--EKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCC--CCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCC--CCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            3445  4455555555555555555555555544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.2e-10  Score=57.93  Aligned_cols=37  Identities=30%  Similarity=0.586  Sum_probs=33.4

Q ss_pred             CCCceecccccccccChhhHHHHhh-hhcCCCCCCcccCC
Q psy16400         47 QENQYSCQHCGKRYRWKSTLKRHEV-FECGGKEPVHQCPH   85 (145)
Q Consensus        47 ~~k~~~C~~c~~~f~~~~~l~~h~~-~h~~~~~k~~~C~~   85 (145)
                      -++||.|.+|++.|....+|..|++ .|++  ++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~--ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTS--ERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCC--CCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCC--CcCcCCcC
Confidence            4689999999999999999999976 6999  88999863

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.5e-10  Score=56.83  Aligned_cols=33  Identities=33%  Similarity=0.503  Sum_probs=31.3

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|+|++||.|.+|++.|.....|..|++.|.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            478999999999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=2.1e-10  Score=55.71  Aligned_cols=28  Identities=14%  Similarity=0.189  Sum_probs=14.1

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      ++||.|.+|++.|.+..+|..|+++|++
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CccccCCCCCCcccChHHHHHHccccCC
Confidence            4455555555555555555555555443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.92  E-value=8.9e-11  Score=61.02  Aligned_cols=39  Identities=21%  Similarity=0.320  Sum_probs=24.7

Q ss_pred             HHHHhhhhcCCCCCCcccCC--CccccCCchhHHHHHHHhcCCC
Q psy16400         66 LKRHEVFECGGKEPVHQCPH--CDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        66 l~~h~~~h~~~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      |..|+. |.+  ++||.|.+  |++.|...++|..|+++|+|||
T Consensus         7 l~~h~~-h~g--ekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EMP--DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE-EET--TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh-ccC--CCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            344443 666  56677754  7777777777777777776664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=3.6e-10  Score=54.84  Aligned_cols=31  Identities=16%  Similarity=0.382  Sum_probs=29.7

Q ss_pred             ccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         45 TTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        45 ~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      |+|++||.|.+|++.|....+|..|++.|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            6899999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5.9e-10  Score=54.56  Aligned_cols=28  Identities=36%  Similarity=0.650  Sum_probs=14.3

Q ss_pred             hcCCCCCCcccCCCccccCCchhHHHHHHH
Q psy16400         73 ECGGKEPVHQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        73 h~~~~~k~~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      |+|  ++||.|..|++.|.+..+|..|++.
T Consensus         3 HTg--ekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           3 HSG--EKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CSC--CCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             cCC--CCCEeCCCCcccccchHHHHHHccc
Confidence            444  4455555555555555555555443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=7.7e-10  Score=54.14  Aligned_cols=33  Identities=24%  Similarity=0.435  Sum_probs=29.9

Q ss_pred             eeccCCCceecccccccccChhhHHHHhhhhcC
Q psy16400         43 VRTTQENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        43 ~~~~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|+|++||.|..|++.|....+|..|+..+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            478999999999999999999999999876654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=8.3e-10  Score=50.79  Aligned_cols=28  Identities=18%  Similarity=0.507  Sum_probs=26.7

Q ss_pred             CCceecccccccccChhhHHHHhhhhcC
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      |+||.|.+|++.|....+|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=9.2e-10  Score=49.49  Aligned_cols=26  Identities=23%  Similarity=0.273  Sum_probs=19.2

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhc
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      |||.|..||+.|.+.++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            47777777777777777777777764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.4e-09  Score=50.78  Aligned_cols=28  Identities=25%  Similarity=0.509  Sum_probs=23.1

Q ss_pred             CCcccCC--CccccCCchhHHHHHHHhcCC
Q psy16400         79 PVHQCPH--CDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        79 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      |||.|.+  |++.|.+.++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4788876  888888888888888888876

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.8e-09  Score=50.52  Aligned_cols=28  Identities=32%  Similarity=0.459  Sum_probs=22.2

Q ss_pred             CCcccCC--CccccCCchhHHHHHHHhcCC
Q psy16400         79 PVHQCPH--CDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        79 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      |||.|.+  |++.|....+|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4788865  888888888888888888875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.74  E-value=2.5e-09  Score=49.66  Aligned_cols=27  Identities=22%  Similarity=0.535  Sum_probs=26.1

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|.+|++.|.....|.+|+++|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            589999999999999999999999999

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.74  E-value=2e-09  Score=55.75  Aligned_cols=38  Identities=11%  Similarity=0.357  Sum_probs=33.7

Q ss_pred             CCCCCceeccCCCceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         37 DPNPKYVRTTQENQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        37 ~~~~~~~~~~~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .+.+|. .|+|+++|.|.+  |++.|....+|..|+++|+|
T Consensus         6 ~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            344555 599999999987  99999999999999999998

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3e-09  Score=50.12  Aligned_cols=29  Identities=24%  Similarity=0.335  Sum_probs=22.8

Q ss_pred             CCcccC--CCccccCCchhHHHHHHHhcCCC
Q psy16400         79 PVHQCP--HCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        79 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +||.|+  .|++.|....+|..|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            478884  58888888888888888888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4.2e-09  Score=48.82  Aligned_cols=27  Identities=22%  Similarity=0.553  Sum_probs=26.1

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++|.|.+|++.|.....|..|+++|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            589999999999999999999999998

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=6.3e-09  Score=46.69  Aligned_cols=26  Identities=31%  Similarity=0.672  Sum_probs=24.5

Q ss_pred             CceecccccccccChhhHHHHhhhhc
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      |||.|.+||+.|.....|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999885

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.1e-08  Score=49.75  Aligned_cols=32  Identities=31%  Similarity=0.704  Sum_probs=29.8

Q ss_pred             eeccc--ccccccChhhHHHHhhhhcCCCCCCcccC
Q psy16400         51 YSCQH--CGKRYRWKSTLKRHEVFECGGKEPVHQCP   84 (145)
Q Consensus        51 ~~C~~--c~~~f~~~~~l~~h~~~h~~~~~k~~~C~   84 (145)
                      |.|.+  |++.|..+..|.+|+++|+|  ++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg--ekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD--TRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT--SCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC--CCCEeCC
Confidence            77876  99999999999999999999  8899986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.50  E-value=2.3e-08  Score=46.15  Aligned_cols=27  Identities=37%  Similarity=0.570  Sum_probs=20.0

Q ss_pred             CCcccCC--CccccCCchhHHHHHHHhcC
Q psy16400         79 PVHQCPH--CDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        79 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  105 (145)
                      |||.|.+  |++.|...++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4677755  77777777777777777765

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=7.4e-08  Score=44.81  Aligned_cols=27  Identities=30%  Similarity=0.763  Sum_probs=25.6

Q ss_pred             Cceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|.+  |++.|....+|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            6899987  99999999999999999998

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=8.2e-08  Score=44.61  Aligned_cols=27  Identities=30%  Similarity=0.493  Sum_probs=25.7

Q ss_pred             Cceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|.+  |++.|....+|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            5899998  99999999999999999998

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.40  E-value=1.1e-07  Score=44.85  Aligned_cols=27  Identities=22%  Similarity=0.372  Sum_probs=19.6

Q ss_pred             CCcccCC--CccccCCchhHHHHHHHhcC
Q psy16400         79 PVHQCPH--CDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        79 k~~~C~~--C~~~f~~~~~l~~H~~~h~~  105 (145)
                      +||.|..  |++.|...++|.+|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            4777755  77777777777777777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=7.7e-08  Score=43.87  Aligned_cols=26  Identities=35%  Similarity=0.544  Sum_probs=20.7

Q ss_pred             CCcccCC--CccccCCchhHHHHHHHhc
Q psy16400         79 PVHQCPH--CDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        79 k~~~C~~--C~~~f~~~~~l~~H~~~h~  104 (145)
                      +||.|..  |++.|....+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4788865  8888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.2e-07  Score=43.48  Aligned_cols=27  Identities=33%  Similarity=0.773  Sum_probs=25.1

Q ss_pred             Cceecc--cccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQ--HCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~--~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|.  .|++.|....+|..|+++|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            589996  499999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=2.6e-07  Score=42.46  Aligned_cols=27  Identities=30%  Similarity=0.733  Sum_probs=25.2

Q ss_pred             Cceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|.+  |++.|....+|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=2.9e-07  Score=42.23  Aligned_cols=30  Identities=13%  Similarity=0.090  Sum_probs=16.9

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcCCCcc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHTSIEL  109 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~~kp~  109 (145)
                      ...|..||+.|.....|++|...|++||||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345555555555555555555555555555

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.14  E-value=7.4e-07  Score=41.87  Aligned_cols=28  Identities=32%  Similarity=0.643  Sum_probs=26.1

Q ss_pred             CCceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         48 ENQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        48 ~k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++||.|.+  |++.|....+|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            58999998  99999999999999999975

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=4e-07  Score=38.96  Aligned_cols=25  Identities=24%  Similarity=0.502  Sum_probs=15.1

Q ss_pred             cccCCCccccCCchhHHHHHHHhcC
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      .+|..|++-|+.+..|+.|+|.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            3556666666666666666666554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.09  E-value=8.7e-07  Score=39.09  Aligned_cols=27  Identities=19%  Similarity=0.303  Sum_probs=20.5

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhc
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      ++||.|.+||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            357888888888888888888777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=7.6e-07  Score=40.46  Aligned_cols=26  Identities=27%  Similarity=0.649  Sum_probs=24.1

Q ss_pred             Cceeccc--ccccccChhhHHHHhhhhc
Q psy16400         49 NQYSCQH--CGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        49 k~~~C~~--c~~~f~~~~~l~~h~~~h~   74 (145)
                      +||.|.+  |++.|....+|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899988  9999999999999999885

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.5e-06  Score=38.19  Aligned_cols=29  Identities=31%  Similarity=0.577  Sum_probs=23.6

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      +|||.|++|...|..+..+..|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            35888888888888888888888888763

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=4e-06  Score=36.84  Aligned_cols=27  Identities=33%  Similarity=0.525  Sum_probs=22.8

Q ss_pred             cccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      |.|..|+.....++-|+.|+|.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            778888888888888888888888874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=3.4e-06  Score=38.61  Aligned_cols=31  Identities=35%  Similarity=0.602  Sum_probs=28.4

Q ss_pred             CceecccccccccChhhHHHHhhhhcCCCCCCc
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVH   81 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~   81 (145)
                      +...|+.||+.|..-..|.+|..+|.+  +|||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~--ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSG--EKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCS--CCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCC--CCCC
Confidence            457899999999999999999999999  8787

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=3.7e-06  Score=35.88  Aligned_cols=26  Identities=35%  Similarity=0.639  Sum_probs=23.8

Q ss_pred             ceecccccccccChhhHHHHhhhhcC
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      |+.|..|++.|..+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46799999999999999999999875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.86  E-value=6.7e-06  Score=35.25  Aligned_cols=26  Identities=31%  Similarity=0.503  Sum_probs=19.6

Q ss_pred             ccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         82 QCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        82 ~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      .|+.|.+.|.++..|+.|-|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            47777777777777777777777764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=8.4e-06  Score=35.86  Aligned_cols=27  Identities=26%  Similarity=0.708  Sum_probs=24.4

Q ss_pred             CCceecccccccccChhhHHHHhhhhc
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      ++||.|+.||+.|.......+|.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999988873

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=8.4e-06  Score=35.61  Aligned_cols=28  Identities=29%  Similarity=0.611  Sum_probs=18.3

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      +||+|..|...-.+.+.|..|+|.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4666666666666666667777666653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.5e-05  Score=34.59  Aligned_cols=25  Identities=40%  Similarity=0.779  Sum_probs=15.5

Q ss_pred             eecccccccccChhhHHHHhhhhcC
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +.|.+||+.|.-...|++|+..|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4566666666666666666666655

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.2e-05  Score=34.93  Aligned_cols=26  Identities=23%  Similarity=0.363  Sum_probs=24.1

Q ss_pred             cccCCCccccCCchhHHHHHHHhcCC
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      ..|..||+.|...+.|++|...|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57999999999999999999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=5.7e-05  Score=33.62  Aligned_cols=29  Identities=34%  Similarity=0.673  Sum_probs=26.8

Q ss_pred             CCceecccccccccChhhHHHHhhhhcCC
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECGG   76 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~~   76 (145)
                      ++||.|.+|+..|..+..+.-|.++|.|+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57999999999999999999999999883

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=6.1e-05  Score=32.80  Aligned_cols=28  Identities=32%  Similarity=0.437  Sum_probs=25.5

Q ss_pred             CCceecccccccccChhhHHHHhhhhcC
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++||.|+.|...-...+.|..|.+.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            5799999999988888999999999987

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=7.1e-05  Score=33.27  Aligned_cols=26  Identities=27%  Similarity=0.524  Sum_probs=15.6

Q ss_pred             CcccCC--CccccCCchhHHHHHHHhcC
Q psy16400         80 VHQCPH--CDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        80 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  105 (145)
                      ||.|..  |++.+...++|..|++.++|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            566643  66666666666666665543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.0001  Score=31.82  Aligned_cols=26  Identities=35%  Similarity=0.627  Sum_probs=22.0

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhc
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      |||+|..|+..-...++|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            58888888888888888999988875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.18  E-value=0.00017  Score=31.47  Aligned_cols=28  Identities=29%  Similarity=0.662  Sum_probs=20.3

Q ss_pred             CCceecccccccccChhhHHHHhhhhcC
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +..|.|..|...|.....|..|+.+|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            3457777777777777777777777766

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00014  Score=32.28  Aligned_cols=27  Identities=37%  Similarity=0.683  Sum_probs=23.9

Q ss_pred             Cceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|..  |++.|...+.|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5899987  99999999999999997654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.08  E-value=0.00026  Score=30.99  Aligned_cols=27  Identities=15%  Similarity=0.183  Sum_probs=16.6

Q ss_pred             CcccC--CCccccCCchhHHHHHHHhcCC
Q psy16400         80 VHQCP--HCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        80 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      ||.|.  .|.+.|.....|.+|..+|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            55553  3666666666666666666654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.05  E-value=0.00025  Score=30.20  Aligned_cols=24  Identities=33%  Similarity=0.549  Sum_probs=22.7

Q ss_pred             ecccccccccChhhHHHHhhhhcC
Q psy16400         52 SCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        52 ~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .|..|.+.|.++..|+.|-+.|+|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            588999999999999999999998

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00024  Score=34.11  Aligned_cols=24  Identities=17%  Similarity=0.286  Sum_probs=16.8

Q ss_pred             CCCcccCCCccccCCchhHHHHHH
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      .|||.|..|++.|-+..++.+|.-
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhh
Confidence            567777777777777777776644

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00043  Score=30.35  Aligned_cols=26  Identities=38%  Similarity=0.825  Sum_probs=18.0

Q ss_pred             CCcccCCCccccCCchhHHHHHHHhc
Q psy16400         79 PVHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        79 k~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      |||.|..|.......++|+.|+.+-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            46777777777677777777777643

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.91  E-value=0.00034  Score=30.45  Aligned_cols=24  Identities=29%  Similarity=0.533  Sum_probs=18.2

Q ss_pred             CcccC--CCccccCCchhHHHHHHHh
Q psy16400         80 VHQCP--HCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        80 ~~~C~--~C~~~f~~~~~l~~H~~~h  103 (145)
                      ||.|+  .|++.|+..+.|++|...|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            67775  3888888888888887766

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.90  E-value=0.00036  Score=33.15  Aligned_cols=27  Identities=22%  Similarity=0.529  Sum_probs=18.6

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +.|.|..|++.|.+-..|-.|+..|..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcc
Confidence            356777777777777777777776654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00036  Score=33.48  Aligned_cols=27  Identities=33%  Similarity=0.842  Sum_probs=23.9

Q ss_pred             cCCCceecccccccccChhhHHHHhhh
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRHEVF   72 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h~~~   72 (145)
                      +|-+||.|..|++.|-+...+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467899999999999999999998664

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.83  E-value=0.00025  Score=29.73  Aligned_cols=23  Identities=22%  Similarity=0.351  Sum_probs=13.9

Q ss_pred             cccCCCccccCCchhHHHHHHHh
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45556666666666666666555

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00053  Score=29.87  Aligned_cols=25  Identities=36%  Similarity=0.631  Sum_probs=23.6

Q ss_pred             eecccccccccChhhHHHHhhhhcC
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      |.|..|+....-.+.|..|+++|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            7899999999999999999999998

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.78  E-value=0.00054  Score=28.65  Aligned_cols=24  Identities=33%  Similarity=0.649  Sum_probs=21.8

Q ss_pred             eecccccccccChhhHHHHhhhhc
Q psy16400         51 YSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      |.|..|.++|.-++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            679999999999999999999874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.77  E-value=0.00045  Score=32.80  Aligned_cols=30  Identities=13%  Similarity=0.238  Sum_probs=26.5

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      .+.|.|..|++.|.....|--|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            347999999999999999999999997654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00032  Score=31.37  Aligned_cols=27  Identities=19%  Similarity=0.315  Sum_probs=18.8

Q ss_pred             CCcccCC--CccccCCchhHHHHH-HHhcC
Q psy16400         79 PVHQCPH--CDYRAKQSGNLRVHI-RKYHT  105 (145)
Q Consensus        79 k~~~C~~--C~~~f~~~~~l~~H~-~~h~~  105 (145)
                      +||.|..  |.+.|++.+....|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4677744  788888877777776 66654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.70  E-value=0.00061  Score=29.74  Aligned_cols=27  Identities=26%  Similarity=0.648  Sum_probs=24.1

Q ss_pred             Cceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|..  |.+.|.+...|.+|..+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            4788865  99999999999999999987

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00056  Score=29.82  Aligned_cols=23  Identities=26%  Similarity=0.577  Sum_probs=14.8

Q ss_pred             ceecccccccccChhhHHHHhhh
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVF   72 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~   72 (145)
                      ||.|..|+-.|..+.+|..||.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            46666666666666666666654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.42  E-value=0.0017  Score=28.15  Aligned_cols=29  Identities=24%  Similarity=0.448  Sum_probs=26.3

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      +..|.|..|...|.....|..|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34789999999999999999999999986

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.36  E-value=0.0014  Score=28.38  Aligned_cols=25  Identities=48%  Similarity=0.899  Sum_probs=22.1

Q ss_pred             Cceeccc--ccccccChhhHHHHhhhh
Q psy16400         49 NQYSCQH--CGKRYRWKSTLKRHEVFE   73 (145)
Q Consensus        49 k~~~C~~--c~~~f~~~~~l~~h~~~h   73 (145)
                      .||.|..  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788876  999999999999999876

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0018  Score=30.50  Aligned_cols=27  Identities=30%  Similarity=0.539  Sum_probs=22.9

Q ss_pred             CCCccc--CCCccccCCchhHHHHHHHhc
Q psy16400         78 EPVHQC--PHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        78 ~k~~~C--~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      .|||.|  +.|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            678988  669999999999999988875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.0029  Score=27.53  Aligned_cols=26  Identities=35%  Similarity=0.800  Sum_probs=18.1

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      ||+|..|.....+.++|..|++.-++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            67777777666677777777766544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.0019  Score=28.07  Aligned_cols=25  Identities=28%  Similarity=0.628  Sum_probs=22.4

Q ss_pred             CcccCCCccccCCchhHHHHHHHhc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      ||.|..|...|..+.+|..|+..-.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6899999999999999999998643

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.95  E-value=0.0016  Score=29.06  Aligned_cols=23  Identities=22%  Similarity=0.303  Sum_probs=16.2

Q ss_pred             CcccCCCccccCCchhHHHHHHH
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      ||.|..|++.|....-|.+|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            56777777777777777777664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.0031  Score=27.51  Aligned_cols=27  Identities=33%  Similarity=0.429  Sum_probs=23.8

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|+.|...-...++|+.|+.+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            589999999888889999999998665

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.30  E-value=0.0055  Score=27.22  Aligned_cols=26  Identities=23%  Similarity=0.514  Sum_probs=22.0

Q ss_pred             ceecccccccccChhhHHHHhhhhcC
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      ||.|.+|++.|..+..|.+|+..-++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            68999999999999999999765443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.29  E-value=0.0057  Score=25.41  Aligned_cols=23  Identities=26%  Similarity=0.508  Sum_probs=18.9

Q ss_pred             CcccCCCccccCCchhHHHHHHH
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      ||+|..|...|-++..|+.|+-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            78888888888888888888653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.0092  Score=25.46  Aligned_cols=26  Identities=23%  Similarity=0.464  Sum_probs=23.4

Q ss_pred             CceecccccccccChhhHHHHhhhhc
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      +||.|..|...-...+.|..|++.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.0083  Score=25.69  Aligned_cols=25  Identities=28%  Similarity=0.631  Sum_probs=15.6

Q ss_pred             CcccCCCccccCCchhHHHHHHHhc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      |.+|+.|..+.+++..|..|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3456666666666666666666653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.01  E-value=0.011  Score=25.06  Aligned_cols=22  Identities=27%  Similarity=0.433  Sum_probs=13.5

Q ss_pred             CcccCCCccccCCchhHHHHHH
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      ||.|..||+-+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4566666666666666666543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.011  Score=27.66  Aligned_cols=29  Identities=21%  Similarity=0.487  Sum_probs=25.1

Q ss_pred             CCCceeccc--ccccccChhhHHHHhhhhcC
Q psy16400         47 QENQYSCQH--CGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        47 ~~k~~~C~~--c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .++||.|..  |+..|.....|..|...|.-
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~m   33 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhee
Confidence            478999965  99999999999999888764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.0059  Score=27.12  Aligned_cols=26  Identities=27%  Similarity=0.615  Sum_probs=22.0

Q ss_pred             Cceeccc--ccccccChhhHHHHh-hhhc
Q psy16400         49 NQYSCQH--CGKRYRWKSTLKRHE-VFEC   74 (145)
Q Consensus        49 k~~~C~~--c~~~f~~~~~l~~h~-~~h~   74 (145)
                      +||.|+.  |.+.|...+.-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            5899988  999999999888887 6664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.014  Score=25.29  Aligned_cols=27  Identities=22%  Similarity=0.384  Sum_probs=23.1

Q ss_pred             CceecccccccccChhhHHHHhhhhcC
Q psy16400         49 NQYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        49 k~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      +||.|..|.-.....++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999999888899999999886554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.25  E-value=0.017  Score=24.55  Aligned_cols=24  Identities=38%  Similarity=0.732  Sum_probs=20.8

Q ss_pred             ceecccccccccChhhHHHHhhhh
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFE   73 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h   73 (145)
                      ||.|..||+.|-.+.+|..|....
T Consensus         1 pf~c~kcgkcyfrkenllehearn   24 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEARN   24 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHC
T ss_pred             CCccccchhhhhhHhHHHHHHHHh
Confidence            588999999999999999987643

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.017  Score=26.40  Aligned_cols=19  Identities=16%  Similarity=0.111  Sum_probs=15.2

Q ss_pred             cccccChhhHHHHhhhhcC
Q psy16400         57 GKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        57 ~~~f~~~~~l~~h~~~h~~   75 (145)
                      ++.|.....|..|++.|+|
T Consensus        14 ~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHC
T ss_pred             CCcchhHHHHHHHHhhcCC
Confidence            3568888888888888887

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.70  E-value=0.025  Score=24.83  Aligned_cols=27  Identities=19%  Similarity=0.331  Sum_probs=16.4

Q ss_pred             Cccc--CCCccccCCchhHHHHHHHhcCC
Q psy16400         80 VHQC--PHCDYRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        80 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~  106 (145)
                      .|.|  +.|+..|.....|..|+-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4555  34666666666666666666654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.36  E-value=0.033  Score=23.10  Aligned_cols=22  Identities=23%  Similarity=0.570  Sum_probs=15.9

Q ss_pred             cccCCCccccCCchhHHHHHHH
Q psy16400         81 HQCPHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        81 ~~C~~C~~~f~~~~~l~~H~~~  102 (145)
                      |.|+.|-+-|..+.++..|..+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677777777777777777664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.20  E-value=0.03  Score=25.34  Aligned_cols=26  Identities=12%  Similarity=0.307  Sum_probs=18.4

Q ss_pred             CcccCCCccccCCchhHHHHHHHhcC
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYHT  105 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~~  105 (145)
                      .|.|..|++.|.....+.+|....+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46777777777777777777666655

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.11  E-value=0.033  Score=25.21  Aligned_cols=26  Identities=31%  Similarity=0.742  Sum_probs=22.8

Q ss_pred             ceecccccccccChhhHHHHhhhhcC
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFECG   75 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~~   75 (145)
                      .|.|..|++.|.....+.+|-....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999877666

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.89  E-value=0.049  Score=23.10  Aligned_cols=24  Identities=42%  Similarity=0.850  Sum_probs=17.9

Q ss_pred             CcccCCCccccCCchhHHHHHHHh
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKY  103 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h  103 (145)
                      .|.|+.|+.....++.|..|++..
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            367888887777888888777753

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.96  E-value=0.066  Score=22.76  Aligned_cols=25  Identities=28%  Similarity=0.595  Sum_probs=21.8

Q ss_pred             ceecccccccccChhhHHHHhhhhc
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      +-.|.+|..+..++..|..|.+.|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3479999999999999999999885

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.92  E-value=0.049  Score=24.79  Aligned_cols=19  Identities=26%  Similarity=0.176  Sum_probs=16.8

Q ss_pred             cccCCchhHHHHHHHhcCC
Q psy16400         88 YRAKQSGNLRVHIRKYHTS  106 (145)
Q Consensus        88 ~~f~~~~~l~~H~~~h~~~  106 (145)
                      +.|.....|..|+|.|+||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4688889999999999986

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.40  E-value=0.061  Score=26.38  Aligned_cols=24  Identities=29%  Similarity=0.585  Sum_probs=19.2

Q ss_pred             ceecccccccccChhhHHHHhhhh
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFE   73 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h   73 (145)
                      .|.|..|++.|.....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            477888888888888888887766

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.26  E-value=0.13  Score=22.05  Aligned_cols=24  Identities=33%  Similarity=0.762  Sum_probs=14.9

Q ss_pred             ceecccccccccChhhHHHHhhhh
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFE   73 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h   73 (145)
                      .|+|..|++...+...++-|....
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEeec
Confidence            356777777766666666665443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.26  E-value=0.11  Score=25.46  Aligned_cols=25  Identities=20%  Similarity=0.332  Sum_probs=22.2

Q ss_pred             CcccCCCccccCCchhHHHHHHHhc
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~~h~  104 (145)
                      .|.|-.|++.|.....|..|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5899999999999999999987774

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.11  E-value=0.22  Score=24.22  Aligned_cols=30  Identities=37%  Similarity=0.519  Sum_probs=20.0

Q ss_pred             CCCcccCCCccccCCchhHHHHHHHhcCCC
Q psy16400         78 EPVHQCPHCDYRAKQSGNLRVHIRKYHTSI  107 (145)
Q Consensus        78 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k  107 (145)
                      +.|-.|+.|+....+..+|.+|...-+-.|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            446677777777777777777776544333

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.70  E-value=0.18  Score=21.14  Aligned_cols=20  Identities=25%  Similarity=0.368  Sum_probs=12.1

Q ss_pred             CCccccCCchhHHHHHHHhc
Q psy16400         85 HCDYRAKQSGNLRVHIRKYH  104 (145)
Q Consensus        85 ~C~~~f~~~~~l~~H~~~h~  104 (145)
                      .|++.|.....|+.|+-+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            36666666666666665554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.23  E-value=0.23  Score=22.37  Aligned_cols=22  Identities=18%  Similarity=0.289  Sum_probs=10.8

Q ss_pred             CcccCCCccccCCchhHHHHHH
Q psy16400         80 VHQCPHCDYRAKQSGNLRVHIR  101 (145)
Q Consensus        80 ~~~C~~C~~~f~~~~~l~~H~~  101 (145)
                      .|.|..|.+.+...+++.+|.-
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHH
Confidence            3445555555555555555443

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=87.07  E-value=0.2  Score=23.21  Aligned_cols=27  Identities=30%  Similarity=0.613  Sum_probs=18.4

Q ss_pred             CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccc
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYR   89 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~   89 (145)
                      ++.|.|.+||..             +.|  ..|-.|++|+..
T Consensus         3 ~~~~vC~vCGyi-------------~~g--~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKG--EDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCCE-------------EES--SCCSBCTTTCCB
T ss_pred             CCEEECCCCCCE-------------eeC--CCCCcCCCCCCc
Confidence            456888888864             235  456788888753

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.21  E-value=0.21  Score=23.29  Aligned_cols=27  Identities=30%  Similarity=0.688  Sum_probs=18.0

Q ss_pred             CCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCccc
Q psy16400         48 ENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDYR   89 (145)
Q Consensus        48 ~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~~   89 (145)
                      ++.|.|.+||..+             .|  ..|-.|++|+..
T Consensus         3 ~~~~~C~vCG~i~-------------~g--~~P~~CPvCg~~   29 (37)
T d1nnqa2           3 KKVYICPICGYTA-------------VD--EAPEYCPVCGAP   29 (37)
T ss_dssp             SCEEECTTTCCEE-------------ES--CCCSBCTTTCCB
T ss_pred             CcEEECCCCCCEe-------------cC--CCCCcCCCCCCc
Confidence            3568888888643             34  457788888753

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.74  E-value=0.23  Score=22.06  Aligned_cols=25  Identities=32%  Similarity=0.818  Sum_probs=20.4

Q ss_pred             ceecccccccccChhhHHHHhhhhc
Q psy16400         50 QYSCQHCGKRYRWKSTLKRHEVFEC   74 (145)
Q Consensus        50 ~~~C~~c~~~f~~~~~l~~h~~~h~   74 (145)
                      .|.|.-||..|.+.+.|..|+.-..
T Consensus         8 rf~c~pcgirfss~stleahqtyyc   32 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAYYC   32 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTTTT
T ss_pred             ceeccccceeecChhHHHhhhheee
Confidence            5789999999999999988876443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.94  E-value=0.15  Score=27.15  Aligned_cols=25  Identities=20%  Similarity=0.312  Sum_probs=19.0

Q ss_pred             CCCceecccccccccChhhHHHHhh
Q psy16400         47 QENQYSCQHCGKRYRWKSTLKRHEV   71 (145)
Q Consensus        47 ~~k~~~C~~c~~~f~~~~~l~~h~~   71 (145)
                      |...|.|..|++.|.+...|..|.+
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCEEecccccCccCCHHHHHHHHc
Confidence            3445788888888888888887765

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.19  E-value=0.87  Score=23.62  Aligned_cols=38  Identities=16%  Similarity=0.464  Sum_probs=20.5

Q ss_pred             cCCCceecccccccccChhhHHHHhhhhcCCCCCCcccCCCcc
Q psy16400         46 TQENQYSCQHCGKRYRWKSTLKRHEVFECGGKEPVHQCPHCDY   88 (145)
Q Consensus        46 ~~~k~~~C~~c~~~f~~~~~l~~h~~~h~~~~~k~~~C~~C~~   88 (145)
                      +....|.|..|++.|.....+.   ....-  .-.|.|..|+.
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~---L~d~~--~~~F~C~~C~~   47 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQ---LFDPM--TGTFRCTFCHT   47 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHH---HEETT--TTEEBCSSSCC
T ss_pred             ccCCceECCCCCCCcchhhHHH---hcCcC--CCeEEecCCCC
Confidence            4455677777777776543322   12211  22477777754

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.60  E-value=0.67  Score=19.65  Aligned_cols=19  Identities=21%  Similarity=0.287  Sum_probs=13.9

Q ss_pred             CCCccccCCchhHHHHHHH
Q psy16400         84 PHCDYRAKQSGNLRVHIRK  102 (145)
Q Consensus        84 ~~C~~~f~~~~~l~~H~~~  102 (145)
                      +.|++.|++...|+.|..-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4588888888888777654