Psyllid ID: psy16443

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
Protein Sequence
LTEFDRGNCNCQGLIIPIVKREGRQDRKKPPVLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFSYATILMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDLALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKTSGEPIGDEFSQILGELIKG
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEEEccccccccccccEEEEEEEEccccccccEEcEEEEEEEEccEEEEHHcccccccccccccHHccccccccccEEEEEEHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccEEEEEEEcccccccccccccccEEEEccccHHHHHHHHHHHcccccccccccccccEEEEccccccccHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEEEEcccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcHHcHHEEEEccccccccEEEEEEcHHHHHHccccccccccHHHccccccccccccHcHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccHccccccccEEcccccccHHHHcccHHHccccHHHccccccccccccccccccccccccEEEEEEEEccHccccEEEEcccccccccccccccccccHccccHHHHHHHHHHHHHHcccHHHcccccccccHHHHHHHHHHHHHHHccccccccccEEEEEEEEccccccccccccccEEEcccccHHHHHHHHHHHcccccccccccccccEEEEEcccHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
ltefdrgncncqgliipivkregrqdrkkppvlRINLICLGSANLALTRLLSISLIYITRLAIILLdfndleltscFSYATILMDSQVQSQGRLLDivdnewkedklpsddisvpqnelpdpdsdngdshltlreqesKWTDLALSQLILFLNSQQHFVIFIMElpqlgkqcgeptckqldflpfqcdlckniyckehmnpvqhncteykdnvllekptttsivsykcsesgcsTLDQVEMLCEQckhhfcvghrfhachQVETSRRKMLREQWKIPKEQFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKskavgdhriptadrvyfnihapkiepspgqekckpiyvsrdwslgkVIDFAATKLKVVnenrnpgvsAKLRLFktsgepigdEFSQILGELIKG
Flexible Loop (DISEMBL)
ltefdrgncncqgliipivkregrqdrkkppVLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFSYATILMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDLALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFKQAKLIADKQIEEKlskaeiqtenrplaLKLRLMKLKskavgdhriptaDRVYFNIHapkiepspgqekCKPIYVSRDWSLGKVIDFAATKlkvvnenrnpgvsaklrlfktsgepigdefSQILGELIKG
Low Complexity Region (SEG)
LTEFDRGNCNCQGLIIPIVKREGRQDRKKPPVLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFSYATILMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDLALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKTSGEPIGDEFSQILGELIKG
Disordered region (IsUnstruct)
******GNCNCQGLIIPIVKRE*******PPVLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFSYATILMDSQVQSQGRLLDIVDNEW************************************KWTDLALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIP***F****LI********************LALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI*******KCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLF*********************
Disordered Region (DISOPRED)
*TEFD**NCNCQGLIIPIVK***********VLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFSYATILMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQN***********************TDLALSQL***************ELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS***************QVEMLCEQCKHHFC****************************************************************************PTADRVYFNIHAPKIEP***QEKCKPIYVSRDWSLGKVIDFAATKLKVVN*****GVSAKLRLFKTSGEPIGDEFSQILGELIK*
Disordered Region (DISEMBL)
LTEFDRGNCNCQGLIIPIVKREGRQDRKKPPVLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFSYATILMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDLALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKTSGEPIGDEFSQILGELIKG
Disordered Region (DISPRO)
*TEFDRGNCNCQGLIIPIVKREGRQDRKKPPVLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFSYATILMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPD*******SHLTLREQESKWTDLALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKD*VLLE*PTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVE*****************FKQAKLIADKQIE************RPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKTSGEPIGDEFSQILGELI**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LTEFDRGNCNCQGLIIPIVKREGRQDRKKPPVLRINLICLGSANLALTRLLSISLIYITRLAIILLDFNDLELTSCFSYATILMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDLALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKTSGEPIGDEFSQILGELIKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	412	2.2.26 [Sep-21-2011]
Q8BFR6	268	AN1-type zinc finger prot	yes	N/A	0.524	0.805	0.365	2e-33
Q8TCF1	268	AN1-type zinc finger prot	yes	N/A	0.524	0.805	0.370	1e-31
Q5RBV4	74	Anaphase-promoting comple	no	N/A	0.157	0.878	0.584	1e-17
Q9BS18	74	Anaphase-promoting comple	no	N/A	0.157	0.878	0.569	5e-17
Q2NKV2	74	Anaphase-promoting comple	no	N/A	0.157	0.878	0.569	5e-17
Q8R034	74	Anaphase-promoting comple	no	N/A	0.157	0.878	0.553	2e-16
Q28IW8	74	Anaphase-promoting comple	no	N/A	0.157	0.878	0.538	7e-16
Q9JII7	171	AN1-type zinc finger prot	no	N/A	0.225	0.543	0.338	1e-13
Q5R966	194	AN1-type zinc finger prot	no	N/A	0.264	0.561	0.314	5e-13
Q91X58	257	AN1-type zinc finger prot	no	N/A	0.225	0.361	0.299	7e-13

>sp|Q8BFR6|ZFAN1_MOUSE AN1-type zinc finger protein 1 OS=Mus musculus GN=Zfand1 PE=1 SV=1

 Score =  143 bits (361), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 125/235 (53%), Gaps = 19/235 (8%)

Query: 168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
           +G+ C    C+Q DFLPF CD C  I+C EH +   H C+E   NV+ E+P T    SY 
Sbjct: 6   IGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEV--NVVKERPKTDEHKSYS 63

Query: 228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
           CS  GC+ ++ V ++C  C+ +FC+ HR    H C ++E ++ +M   Q        K  
Sbjct: 64  CSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLEVAKPRMAATQ--------KLV 115

Query: 285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
           + I D +     SK     ++   A K+ LMKLK  A GD  +P  +R YF ++ PK   
Sbjct: 116 RDIVDAKTGGAASKGRKGAKSSGTAAKVALMKLKMHADGDKSLPQTERTYFQVYLPK--- 172

Query: 345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKT-SGEPI 398
              +EK K ++    WS+GKV+DFAA+   + NEN N   + KLRL    SGE +
Sbjct: 173 -GSKEKSKAMFFCLRWSIGKVVDFAASLANLRNEN-NKLTAKKLRLCHVPSGEAL 225

Mus musculus (taxid: 10090)

>sp|Q8TCF1|ZFAN1_HUMAN AN1-type zinc finger protein 1 OS=Homo sapiens GN=ZFAND1 PE=1 SV=1

 Score =  137 bits (346), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 122/235 (51%), Gaps = 19/235 (8%)

Query: 168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
           +G+ C    C+Q DFLPF CD C  I+C EH +   H C E    V+ E+  T    SY 
Sbjct: 6   IGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCPEV--TVINERLKTDQHTSYP 63

Query: 228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
           CS   C+  + V ++C  C+ +FC+ HR    H C ++E  + +M   Q        K  
Sbjct: 64  CSFKDCAERELVAVICPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQ--------KLV 115

Query: 285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
           K I D +  E  SK     +N   A K+ LMKLK  A GD  +P  +R+YF +  PK   
Sbjct: 116 KDIIDSKTGETASKRWKGAKNSETAAKVALMKLKMHADGDKSLPQTERIYFQVFLPK--- 172

Query: 345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPI 398
              +EK KP++    WS+GK IDFAA+  ++ N+N N   + KLRL   TSGE +
Sbjct: 173 -GSKEKSKPMFFCHRWSIGKAIDFAASLARLKNDN-NKFTAKKLRLCHITSGEAL 225

Homo sapiens (taxid: 9606)

>sp|Q5RBV4|APC13_PONAB Anaphase-promoting complex subunit 13 OS=Pongo abelii GN=ANAPC13 PE=3 SV=1

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/65 (58%), Positives = 53/65 (81%)

Query: 84  MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
           MDS+VQ  GR+LD++D+ W+EDKLP +D+++P NELPDP+ DNG +  +++EQE KWTDL
Sbjct: 1   MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPDPEQDNGGTTESVKEQEMKWTDL 60

Query: 144 ALSQL 148
           AL  L
Sbjct: 61  ALQYL 65

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.

Pongo abelii (taxid: 9601)

>sp|Q9BS18|APC13_HUMAN Anaphase-promoting complex subunit 13 OS=Homo sapiens GN=ANAPC13 PE=1 SV=1

 Score = 89.4 bits (220), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 53/65 (81%)

Query: 84  MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
           MDS+VQ  GR+LD++D+ W+EDKLP +D+++P NELP+P+ DNG +  +++EQE KWTDL
Sbjct: 1   MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL 60

Query: 144 ALSQL 148
           AL  L
Sbjct: 61  ALQYL 65

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.

Homo sapiens (taxid: 9606)

>sp|Q2NKV2|APC13_BOVIN Anaphase-promoting complex subunit 13 OS=Bos taurus GN=ANAPC13 PE=3 SV=1

 Score = 89.4 bits (220), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 53/65 (81%)

Query: 84  MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
           MDS+VQ  GR+LD++D+ W+EDKLP +D+++P NELP+P+ DNG +  +++EQE KWTDL
Sbjct: 1   MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL 60

Query: 144 ALSQL 148
           AL  L
Sbjct: 61  ALQYL 65

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.

Bos taurus (taxid: 9913)

>sp|Q8R034|APC13_MOUSE Anaphase-promoting complex subunit 13 OS=Mus musculus GN=Anapc13 PE=2 SV=1

 Score = 87.4 bits (215), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 53/65 (81%)

Query: 84  MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
           MDS+VQ  GR+LD++D+ W+EDKLP +D+++P +ELP+P+ DNG +  +++EQE KWTDL
Sbjct: 1   MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLSELPEPEQDNGGTTESVKEQEMKWTDL 60

Query: 144 ALSQL 148
           AL  L
Sbjct: 61  ALQGL 65

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.

Mus musculus (taxid: 10090)

>sp|Q28IW8|APC13_XENTR Anaphase-promoting complex subunit 13 OS=Xenopus tropicalis GN=anapc13 PE=3 SV=1

 Score = 85.5 bits (210), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/65 (53%), Positives = 51/65 (78%)

Query: 84  MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
           MDS+V   GR+LD++D+ W+EDKLP +D+++P NELP+P+ DNG +  +++EQE KW DL
Sbjct: 1   MDSEVLRDGRILDLIDDAWREDKLPYEDVTIPLNELPEPEQDNGGATESVKEQEMKWADL 60

Query: 144 ALSQL 148
           AL  L
Sbjct: 61  ALQYL 65

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.

Xenopus tropicalis (taxid: 8364)

>sp|Q9JII7|ZFN2A_MOUSE AN1-type zinc finger protein 2A OS=Mus musculus GN=Zfand2a PE=2 SV=1

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 34/127 (26%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYKDNV------LL 215
           ME P LGK C EPTCKQLDFLP  CD CK  +CK+H + V H C   +K +V      L 
Sbjct: 1   MEFPDLGKHCSEPTCKQLDFLPITCDACKQDFCKDHFSYVGHKCPFAFKKDVQVPVCPLC 60

Query: 216 EKP---------------------------TTTSIVSYKCSESGCSTLDQVEMLCEQCKH 248
             P                               + +++CS+ GC   + +++ C QC  
Sbjct: 61  NAPIPVKRGEIPDVVVGEHMDRDCTFHPGRNRNKVFTHRCSKEGCRKKEMLQLACAQCHG 120

Query: 249 HFCVGHR 255
           +FC+ HR
Sbjct: 121 NFCIQHR 127

Mus musculus (taxid: 10090)

>sp|Q5R966|ZFN2A_PONAB AN1-type zinc finger protein 2A OS=Pongo abelii GN=ZFAND2A PE=3 SV=1

 Score = 75.9 bits (185), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 61/143 (42%), Gaps = 34/143 (23%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYKDNV------LL 215
           ME P LGK C E TCKQLDFLP +CD CK  +CK+H     H C   ++ +V      L 
Sbjct: 1   MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFTYAAHKCPFAFQKDVHVPVCPLC 60

Query: 216 EKPTTT---------------------------SIVSYKCSESGCSTLDQVEMLCEQCKH 248
             P                               I +Y+CS+ GC   + ++M C QC  
Sbjct: 61  NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMSCAQCHG 120

Query: 249 HFCVGHRFHACHQVETSRRKMLR 271
           +FC+ HR    H      R  ++
Sbjct: 121 NFCIQHRHPLDHSCRHGSRPTIK 143

Pongo abelii (taxid: 9601)

>sp|Q91X58|ZFN2B_MOUSE AN1-type zinc finger protein 2B OS=Mus musculus GN=Zfand2b PE=1 SV=1

 Score = 75.5 bits (184), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 34/127 (26%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNC-TEYKDNV------LL 215
           ME P LG  C EP+C++LDFLP +CD C  I+C +H+   QH+C + Y+ ++      L 
Sbjct: 1   MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60

Query: 216 EKPTTTS---------------------------IVSYKCSESGCSTLDQVEMLCEQCKH 248
             P   +                           I + KC  SGC   + +++ C++C  
Sbjct: 61  NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERSGCRQREMMKLTCDRCGR 120

Query: 249 HFCVGHR 255
           +FC+ HR
Sbjct: 121 NFCIKHR 127

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	412
242018789	342	AN1-type zinc finger protein, putative [	0.686	0.827	0.450	7e-67
270006861	311	hypothetical protein TcasGA2_TC013251 [T	0.706	0.935	0.405	3e-55
328697431	284	PREDICTED: AN1-type zinc finger protein	0.584	0.848	0.426	4e-45
380024594	268	PREDICTED: AN1-type zinc finger protein	0.587	0.902	0.386	1e-44
110763445	268	PREDICTED: AN1-type zinc finger protein	0.587	0.902	0.378	4e-44
156539615	268	PREDICTED: AN1-type zinc finger protein	0.584	0.899	0.4	4e-44
383866406	268	PREDICTED: AN1-type zinc finger protein	0.565	0.869	0.385	1e-43
340725822	268	PREDICTED: AN1-type zinc finger protein	0.587	0.902	0.374	2e-42
350397073	268	PREDICTED: AN1-type zinc finger protein	0.587	0.902	0.374	8e-42
322799148	270	hypothetical protein SINV_00942 [Solenop	0.582	0.888	0.388	2e-40

>gi|242018789|ref|XP_002429856.1| AN1-type zinc finger protein, putative [Pediculus humanus corporis] gi|212514874|gb|EEB17118.1| AN1-type zinc finger protein, putative [Pediculus humanus corporis]

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 141/313 (45%), Positives = 183/313 (58%), Gaps = 30/313 (9%)

Query: 83  LMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTD 142
           + DSQV+  GRL+DI DN W+E+KLP D I VP +ELPDP++DNGDSH T++EQE KW D
Sbjct: 1   MEDSQVRIDGRLIDIADNAWREEKLPKDLIEVPPSELPDPEADNGDSHTTVKEQEQKWAD 60

Query: 143 LALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPV 202
           LAL  L                     K C  P CK LDFLP  C  C   +CKEH N  
Sbjct: 61  LALGTL---------------------KNCSWPLCKALDFLPVICSSCNKKFCKEHFNYN 99

Query: 203 QHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQV 262
            H+C     N          + S+KCS   C T D VEM C +CK HFC+ H+FH C  V
Sbjct: 100 SHDCNAVNKNF---DNNQKPVKSFKCSNEKCETYDPVEMNCVKCKQHFCLQHKFHNCFDV 156

Query: 263 ETSRRKMLREQWKIPKEQFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAV 322
             +  +  +E W  PKEQF ++ ++A K + EK+ KA    + +  A+K++LMKLK+KA+
Sbjct: 157 VLNVEEKKKE-WNQPKEQFSKSLVVAQKTVNEKIQKAMDNPKRQATAMKIQLMKLKAKAI 215

Query: 323 GDHRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNP 382
           G   IP   R+YF I  PK    P     KP++VS++WS+GKVID A+T   VVN+N N 
Sbjct: 216 GMATIPAVKRIYFLIILPKSLNKPS----KPVFVSKNWSVGKVIDSASTICNVVNKN-NE 270

Query: 383 GVSAKLRLFKTSG 395
               KLRLFKT+G
Sbjct: 271 FNEPKLRLFKTNG 283

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270006861|gb|EFA03309.1| hypothetical protein TcasGA2_TC013251 [Tribolium castaneum]

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 181/328 (55%), Gaps = 37/328 (11%)

Query: 84  MDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQNELPDPDSDNGDSHLTLREQESKWTDL 143
           MDS V   G  +D++D++W+ +KLP DDI+VP +EL DP++D+GD HLTL+EQE KWTD+
Sbjct: 1   MDSSVTIDGYFVDLIDDKWRSEKLPHDDINVPTHELADPEADSGDIHLTLQEQEQKWTDI 60

Query: 144 ALSQLILFLNSQQHFVIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQ 203
           ALSQ                       QC    C+QLDFLP QC  C   +C EH N   
Sbjct: 61  ALSQ-----------------------QCAHSNCQQLDFLPLQCK-CGKQFCSEHFNKHV 96

Query: 204 HNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHR-FHACHQV 262
             C E   NV +E     ++  +KCS   C     V +LC  C+ HFC+ HR    C + 
Sbjct: 97  QVC-ETSTNVEVEPQKIQNV--FKCSFENCHESSLVPLLCSTCRKHFCIKHRHITQCSEP 153

Query: 263 ETSRRKMLREQWKIPKEQFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAV 322
           +       RE+   P  QF +AK   DKQIE+ L  A+ + +N  LA K++LMK+K+KA 
Sbjct: 154 DEETLAQKREKLAAPVRQFNEAKSAVDKQIEQNLIAAKKKGKN--LANKVQLMKIKNKAK 211

Query: 323 GDHRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNP 382
           G + IPT+DRVYFN+      P  G     P++VS+ WSLG+ ID  A++ K+ N+N   
Sbjct: 212 GLNSIPTSDRVYFNV----THPETGH--VTPVFVSKIWSLGRAIDAIASECKLRNDNNKS 265

Query: 383 GVSAKLRLFKTSGEPIGDEFSQILGELI 410
           G   KLRLFK     I    +  L +LI
Sbjct: 266 G-EKKLRLFKQDSGEISKNLADGLEKLI 292

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328697431|ref|XP_001945587.2| PREDICTED: AN1-type zinc finger protein 1-like [Acyrthosiphon pisum]

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/253 (42%), Positives = 148/253 (58%), Gaps = 12/253 (4%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYK-DNVLLEKPTTT 221
           ME P  GKQC    CKQLDFLP +CD C  ++CK+H     H C   +  N L  K  TT
Sbjct: 1   MEFPDFGKQCANKDCKQLDFLPVKCDKCHALFCKDHSTFDSHLCVPIECTNDLGPKLETT 60

Query: 222 SIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSR--RKMLREQWKIPKE 279
               +KC+   C + +  EMLC +C  H+C+ HR H C      +  RK+LRE  K  KE
Sbjct: 61  W---FKCTFDSCISKNPCEMLCPKCDKHYCLAHRHHGCLDELPGKEARKVLREAAKKSKE 117

Query: 280 QFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHA 339
            F  AK  ADK+IE  L +AE+Q E R +A ++RLMKLK KA+GD++IP  DRVYF IH 
Sbjct: 118 LFTIAKEEADKKIEASLRQAELQPEKRRMAQQIRLMKLKGKALGDNKIPVIDRVYFTIHP 177

Query: 340 PKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSA-KLRLFK-TSGEP 397
           P  +         P++ S+ W++G+ ID  A +LK+  ENRN   +  KLRLFK   GE 
Sbjct: 178 PIKDNKVTSA--VPLFTSKTWTVGRSIDLFAVRLKI--ENRNDKTNTPKLRLFKLEDGEH 233

Query: 398 IGDEFSQILGELI 410
           + D+  +++G ++
Sbjct: 234 LSDQMDRVIGRMV 246

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024594|ref|XP_003696079.1| PREDICTED: AN1-type zinc finger protein 1-like [Apis florea]

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/251 (38%), Positives = 144/251 (57%), Gaps = 9/251 (3%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS 222
           ME P +G +C    CKQL+FLPF+C+ C +++CKEH +   H C  +KD +   K   ++
Sbjct: 1   MEFPNIGARCSIKDCKQLNFLPFECNHCHDLFCKEHFHISSHKCLSFKDKITYTKIKASN 60

Query: 223 IVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFK 282
              YKCSE  C     +EM C +CK HFCV HR+H C +     +    ++W+IPK+QF 
Sbjct: 61  ---YKCSEEFCKETSPIEMQCIKCKKHFCVQHRYHGCLEYTNEEKTTKLKKWQIPKKQFA 117

Query: 283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI 342
           +AK I D++I   L K+    +N  +A K+RLM+LK  AVG   IP  +R YF ++ P  
Sbjct: 118 EAKAIVDEEISNTLKKS----KNTAMANKVRLMRLKGSAVGVKNIPMNERCYFLVYLPTT 173

Query: 343 EPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPIGDE 401
             +      K IYV+ +W++GK ID  A  LK+ N N N   + KL+LF   +G  I +E
Sbjct: 174 ISNKHIGPSKSIYVNINWTIGKAIDSIADILKISN-NNNLTRTCKLQLFHYATGALICNE 232

Query: 402 FSQILGELIKG 412
            + +L +L + 
Sbjct: 233 MNMLLTKLFEN 243

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110763445|ref|XP_001121310.1| PREDICTED: AN1-type zinc finger protein 1-like [Apis mellifera]

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 144/251 (57%), Gaps = 9/251 (3%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS 222
           ME P +G +C    CKQL+FLPF+C+ C +++CKEH +   H C  +KD +   K   ++
Sbjct: 1   MEFPNIGARCSIKDCKQLNFLPFECNHCHDLFCKEHFHVSSHKCLSFKDKITYTKIKASN 60

Query: 223 IVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFK 282
              Y CSE  C  +  +EM C +CK HFC+ HR+H C +     +    ++W+IPK+QF 
Sbjct: 61  ---YICSEEFCKEISPIEMQCIKCKKHFCLQHRYHGCLEYTNEEKTTKLKKWQIPKKQFA 117

Query: 283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI 342
           +AK I D++I   L K    ++N  +A K+RLM+LK  AVG   IP  +R YF ++ P  
Sbjct: 118 EAKAIVDEEISNTLKK----SKNTAMANKVRLMRLKGSAVGVKNIPMNERCYFLVYLPTT 173

Query: 343 EPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPIGDE 401
             +      K IYV+ +W++GK ID  A  LK+ N N N   + KL+LF   +G  I +E
Sbjct: 174 ISNKHIGPSKSIYVNINWTIGKAIDSIADILKISN-NNNLAKACKLQLFHYATGALICNE 232

Query: 402 FSQILGELIKG 412
            + +L +L + 
Sbjct: 233 MNMLLTKLFEN 243

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156539615|ref|XP_001599018.1| PREDICTED: AN1-type zinc finger protein 1-like [Nasonia vitripennis]

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/250 (40%), Positives = 138/250 (55%), Gaps = 9/250 (3%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS 222
           ME P  G QC    C QLDFLP  C  CKNI+CK H N   H+C +  +NV      T  
Sbjct: 1   MEFPNTGVQCFIKECNQLDFLPLDCKYCKNIFCKNHFNTTSHSCPQLAENV---AENTGK 57

Query: 223 IVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFK 282
              + CS+  C+T   VEM C +CK +FC+ HRFH C +     R+   E+W  PKE F 
Sbjct: 58  ANLFHCSQMQCTTKSAVEMTCVKCKKNFCLIHRFHDCFEENQDTRQSELERWSKPKEVFL 117

Query: 283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI 342
           + K I D ++  KL K++    N  LA+K++LMKLK+K+VG   +P  DR YF++H P  
Sbjct: 118 ETKKIVDTELTNKLKKSK----NSALAIKVQLMKLKNKSVGPSIVPVGDRCYFSVHPPIN 173

Query: 343 EPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKT-SGEPIGDE 401
             S   +  +  YVS +WS+GKVID  +  L + N N    V  KLR+F   +G  + ++
Sbjct: 174 NGSKIFDGSRGAYVSVNWSIGKVIDSISDSLNIPNSNNLANVQ-KLRMFHYLNGNIVTNQ 232

Query: 402 FSQILGELIK 411
              IL EL +
Sbjct: 233 MDIILSELFR 242

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866406|ref|XP_003708661.1| PREDICTED: AN1-type zinc finger protein 1-like [Megachile rotundata]

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/254 (38%), Positives = 145/254 (57%), Gaps = 21/254 (8%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS 222
           ME P +G++C    CKQL+FLP +CD C NI+C EH +   H C  + DN++  K   ++
Sbjct: 1   MEFPDVGERCSMKNCKQLNFLPLKCDYCLNIFCTEHFHIDAHKCLNFHDNIVHSKVKRSN 60

Query: 223 IVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFK 282
              Y CS+  C     +EMLC +CK HFC+ HR+H C +     +    ++W+IPK+QF 
Sbjct: 61  ---YVCSDKCCKETSPIEMLCIKCKKHFCLQHRYHGCLEYTNEEKTTKLKKWQIPKKQFA 117

Query: 283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAP-- 340
           +AK I D+QI + L K    ++N  +A K+RLM++K  AVG   IP  +R Y +++ P  
Sbjct: 118 EAKAIVDQQISDNLKK----SKNVAMANKVRLMRVKGSAVGPKNIPVNERFYLHVYPPTS 173

Query: 341 ----KIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLF-KTSG 395
                I+PS G      +YV+ +W  GKVID  A  LK+ N N   G + KL+LF  T+G
Sbjct: 174 ISNKHIKPSKG------VYVNVNWVYGKVIDSIADTLKISNNNSIAG-ACKLQLFHHTNG 226

Query: 396 EPIGDEFSQILGEL 409
             I +E    + +L
Sbjct: 227 ALICNEMDMPITKL 240

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725822|ref|XP_003401264.1| PREDICTED: AN1-type zinc finger protein 1-like isoform 1 [Bombus terrestris] gi|340725824|ref|XP_003401265.1| PREDICTED: AN1-type zinc finger protein 1-like isoform 2 [Bombus terrestris]

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 142/251 (56%), Gaps = 9/251 (3%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS 222
           ME P +G++C    CKQL+FLPF+C+ C +++CKEH +   H C   KD +     T   
Sbjct: 1   MEFPNVGERCSIKDCKQLNFLPFECNHCHDLFCKEHFHIGSHKCLGLKDKITY---TKIR 57

Query: 223 IVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFK 282
             +Y CS+  C     +EM C +CK HFC+ HR+H C +     +    ++W+IPK+QF 
Sbjct: 58  APNYTCSDESCKETSPIEMQCIKCKKHFCLQHRYHGCLEYTNEEKTTKLKKWQIPKKQFA 117

Query: 283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI 342
           +AK I D++I + L K+    +N  +A K+RLM++K  AVG   +P  +R YF ++ P  
Sbjct: 118 EAKAIVDQEISDTLKKS----KNTTMANKVRLMRVKGSAVGSKNVPVNERCYFLVYPPTT 173

Query: 343 EPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLF-KTSGEPIGDE 401
             +      K IYV+ +W++GK ID  A  LKV N N   G S KL+LF   +G  I +E
Sbjct: 174 ISNKHIGPSKGIYVNMNWTIGKAIDSIADILKVSNNNNVAGAS-KLQLFHHITGTQICNE 232

Query: 402 FSQILGELIKG 412
               L +L++ 
Sbjct: 233 MDTPLIKLLEN 243

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350397073|ref|XP_003484761.1| PREDICTED: AN1-type zinc finger protein 1-like [Bombus impatiens]

 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 142/251 (56%), Gaps = 9/251 (3%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS 222
           ME P +G++C    CKQL+FLPF+C+ C +++CKEH +   H C   KD +     T   
Sbjct: 1   MEFPNVGERCSIKDCKQLNFLPFECNHCHDLFCKEHFHIGSHKCLGLKDKITY---TKIR 57

Query: 223 IVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFK 282
             +Y CS+  C     +EM C +CK HFC+ HR+H C +     +    ++W+IPK+QF 
Sbjct: 58  APNYTCSDELCKETSPIEMQCIKCKKHFCLQHRYHGCLEYTNEEKTTKLKKWQIPKKQFA 117

Query: 283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI 342
           +AK I D++I + L K++    N  +A K+RLM++K  AVG   +P  +R YF ++ P  
Sbjct: 118 EAKAIVDQEISDTLKKSK----NTTMANKVRLMRVKGSAVGSKNVPVNERCYFLVYLPTT 173

Query: 343 EPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLF-KTSGEPIGDE 401
             +      K IYV+ +W++GK ID  A  LKV N N   G S KL+LF   +G  I +E
Sbjct: 174 ISNKHIGPSKGIYVNMNWTIGKAIDSIADILKVSNNNNVAGAS-KLQLFHHITGALICNE 232

Query: 402 FSQILGELIKG 412
               L +L++ 
Sbjct: 233 MDTPLIKLLEN 243

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799148|gb|EFZ20587.1| hypothetical protein SINV_00942 [Solenopsis invicta]

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/250 (38%), Positives = 144/250 (57%), Gaps = 10/250 (4%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS 222
           ME P+ GK+C    CK LDFLPF+C+ C+  +CKEH N   H C + +++    K T   
Sbjct: 1   MEFPETGKRCSMKDCKLLDFLPFECEHCQATFCKEHFNIESHECLKTENS----KSTAEQ 56

Query: 223 IVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFK 282
            VS+ CS+  C     VEMLC +CK HFCV HR H C ++  + R    ++W+IPK+QF 
Sbjct: 57  SVSFLCSKESCKASSPVEMLCVKCKKHFCVTHRHHGCLELGETERTQKLKKWQIPKKQFA 116

Query: 283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI 342
           +AK I D+QI + L K+    +N  LA K++LM++K  A+G   +PT++R YF +H P  
Sbjct: 117 EAKAIVDQQIADSLKKS----KNTTLANKVQLMRVKCSAIGPKNVPTSERSYFLVHLPLT 172

Query: 343 EPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPIGDE 401
             +      K  +V+  W+ GK ID  A  LKV N N     + KL+LF+ ++G+ I  +
Sbjct: 173 VKNKHIGTSKGTFVNMHWTFGKCIDSIADTLKVPNNNNT-TTTNKLKLFRHSTGDLICSK 231

Query: 402 FSQILGELIK 411
               L +L +
Sbjct: 232 MDTPLTKLFE 241

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	412
MGI|MGI:1913611	268	Zfand1 "zinc finger, AN1-type	0.524	0.805	0.365	8.3e-35
UNIPROTKB|Q8TCF1	268	ZFAND1 "AN1-type zinc finger p	0.524	0.805	0.370	2.2e-34
UNIPROTKB|I3LA10	268	ZFAND1 "Uncharacterized protei	0.524	0.805	0.370	2.8e-34
UNIPROTKB|E2R7D3	269	ZFAND1 "Uncharacterized protei	0.524	0.802	0.368	9.5e-34
RGD|1309519	268	Zfand1 "zinc finger, AN1-type	0.524	0.805	0.361	1.1e-32
UNIPROTKB|E5RJ99	227	ZFAND1 "AN1-type zinc finger p	0.480	0.872	0.362	2.9e-32
UNIPROTKB|F1MUK9	268	ZFAND1 "Uncharacterized protei	0.521	0.802	0.355	3.7e-32
UNIPROTKB|E1C263	263	ZFAND1 "Uncharacterized protei	0.502	0.787	0.350	1.4e-30
ZFIN|ZDB-GENE-040801-269	270	zfand1 "zinc finger, AN1-type	0.5	0.762	0.333	1.3e-29
UNIPROTKB|E1C808	260	ZFAND1 "Uncharacterized protei	0.504	0.8	0.327	1.6e-24

MGI|MGI:1913611 Zfand1 "zinc finger, AN1-type domain 1" [Mus musculus (taxid:10090)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 86/235 (36%), Positives = 127/235 (54%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
             +G+ C    C+Q DFLPF CD C  I+C EH +   H C+E   NV+ E+P T    SY 
Sbjct:     6 IGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEV--NVVKERPKTDEHKSYS 63

Query:   228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
             CS  GC+ ++ V ++C  C+ +FC+ HR    H C ++E ++ +M   Q K+ ++     
Sbjct:    64 CSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLEVAKPRMAATQ-KLVRD----- 117

Query:   285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
               I D +     SK     ++   A K+ LMKLK  A GD  +P  +R YF ++ PK   
Sbjct:   118 --IVDAKTGGAASKGRKGAKSSGTAAKVALMKLKMHADGDKSLPQTERTYFQVYLPK--- 172

Query:   345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKT-SGEPI 398
                +EK K ++    WS+GKV+DFAA+   + NEN N   + KLRL    SGE +
Sbjct:   173 -GSKEKSKAMFFCLRWSIGKVVDFAASLANLRNEN-NKLTAKKLRLCHVPSGEAL 225

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q8TCF1 ZFAND1 "AN1-type zinc finger protein 1" [Homo sapiens (taxid:9606)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 87/235 (37%), Positives = 124/235 (52%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
             +G+ C    C+Q DFLPF CD C  I+C EH +   H C E    V+ E+  T    SY 
Sbjct:     6 IGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCPEV--TVINERLKTDQHTSYP 63

Query:   228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
             CS   C+  + V ++C  C+ +FC+ HR    H C ++E  + +M   Q K+ K+     
Sbjct:    64 CSFKDCAERELVAVICPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQ-KLVKD----- 117

Query:   285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
               I D +  E  SK     +N   A K+ LMKLK  A GD  +P  +R+YF +  PK   
Sbjct:   118 --IIDSKTGETASKRWKGAKNSETAAKVALMKLKMHADGDKSLPQTERIYFQVFLPK--- 172

Query:   345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPI 398
                +EK KP++    WS+GK IDFAA+  ++ N+N N   + KLRL   TSGE +
Sbjct:   173 -GSKEKSKPMFFCHRWSIGKAIDFAASLARLKNDN-NKFTAKKLRLCHITSGEAL 225

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3LA10 ZFAND1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 87/235 (37%), Positives = 126/235 (53%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
             +G+ C    C+Q DFLPF CD C  I+C EH +   H+C E    V  E+  + +  SY 
Sbjct:     6 IGQHCQVEHCRQRDFLPFVCDGCSGIFCLEHRSRESHSCPEV--TVTSERLKSDTHTSYP 63

Query:   228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
             CS   C+  + V ++C  C+ +FC+ HR    H C ++E  + +M   Q K+ K+     
Sbjct:    64 CSFKECAERELVPVVCPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQ-KLVKD----- 117

Query:   285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
               I D +  E  SK     +N   A K+ LMKLK  A GD  +P  +R+YF +  PK   
Sbjct:   118 --IIDSKTGETASKRRKGAKNSETAAKVALMKLKMHADGDKSLPQTERIYFQVFLPK--- 172

Query:   345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPI 398
                +EK KP++  + WS+GKVIDFAA+   + N+N N   + KLRL   TSGE +
Sbjct:   173 -GSKEKSKPMFFCQRWSIGKVIDFAASLASLKNDN-NKLTAKKLRLCHITSGEAL 225

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2R7D3 ZFAND1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 87/236 (36%), Positives = 126/236 (53%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
             +G+ C    C++ DFLPF CD C  ++C EH +   H+C E    V+ E+  +    SY 
Sbjct:     6 VGRHCQVERCRRRDFLPFVCDGCSGVFCLEHRSRESHSCPEV--TVIHERLKSDKPTSYP 63

Query:   228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
             CS   C+  + V + C  C+ +FC+ HR    H C ++E  R +M+  Q K+ K+     
Sbjct:    64 CSFKDCAEKELVPVTCPYCEKNFCLRHRHQSDHECEKLEIPRPRMVATQ-KLVKD----- 117

Query:   285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPT-ADRVYFNIHAPKIE 343
               I D +  E  SK     +N   A K+ LMKLK +A GD  +P   +RVYF +  PK  
Sbjct:   118 --IIDSKTGETASKRRKGAKNSETAAKVALMKLKMRADGDKSLPQQTERVYFQVFLPK-- 173

Query:   344 PSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPI 398
                 +EK KP++    WS+GKVIDFAA+   + N+N N   + KLRL   TSGE +
Sbjct:   174 --GSKEKSKPMFFCHRWSIGKVIDFAASLTSLKNDN-NKLTAKKLRLCHITSGEAL 226

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1309519 Zfand1 "zinc finger, AN1-type domain 1" [Rattus norvegicus (taxid:10116)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 85/235 (36%), Positives = 123/235 (52%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
             +G+ C    C+Q DFLPF CD C  I+C EH +   H C E   NV+ E+  T    SY 
Sbjct:     6 IGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCPEA--NVIKERLKTDEHKSYP 63

Query:   228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
             CS  GC+ ++ V ++C  C+ +FC+ HR    H C ++E  + +M   Q K+ ++     
Sbjct:    64 CSFKGCAEVELVAVICPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQ-KLVRD----- 117

Query:   285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
               I D +     SK     ++   A K+ LMKLK  A GD  +P  +R YF ++ PK   
Sbjct:   118 --IVDAKAGGAASKGRKGAKSSRTAAKVALMKLKMHADGDKSLPQTERTYFQVYLPK--- 172

Query:   345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRLFKT-SGEPI 398
                QEK K ++    WS+GKV+D AA+   + NEN N   + KLRL    SGE +
Sbjct:   173 -GSQEKSKAMFFCLRWSIGKVVDVAASLAGLRNEN-NKLTAKKLRLCHVPSGEAL 225

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E5RJ99 ZFAND1 "AN1-type zinc finger protein 1" [Homo sapiens (taxid:9606)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 78/215 (36%), Positives = 113/215 (52%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
             +G+ C    C+Q DFLPF CD C  I+C EH +   H C E    V+ E+  T    SY 
Sbjct:     6 IGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCPEV--TVINERLKTDQHTSYP 63

Query:   228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
             CS   C+  + V ++C  C+ +FC+ HR    H C ++E  + +M   Q K+ K+     
Sbjct:    64 CSFKDCAERELVAVICPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQ-KLVKD----- 117

Query:   285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
               I D +  E  SK     +N   A K+ LMKLK  A GD  +P  +R+YF +  PK   
Sbjct:   118 --IIDSKTGETASKRWKGAKNSETAAKVALMKLKMHADGDKSLPQTERIYFQVFLPK--- 172

Query:   345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNEN 379
                +EK KP++    WS+GK IDFAA+  ++ N+N
Sbjct:   173 -GSKEKSKPMFFCHRWSIGKAIDFAASLARLKNDN 206

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MUK9 ZFAND1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 84/236 (35%), Positives = 123/236 (52%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKD-NVLLEKPTTTSIVSY 226
             +G+ C    C++LDFLPF CD C  ++C EH +   H+C E    N  L+  T TS   +
Sbjct:     6 VGRHCQVERCRRLDFLPFVCDGCSGVFCLEHRSRESHSCPEVTVINKRLKSDTGTS---H 62

Query:   227 KCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQ 283
              CS   C+  + V ++C  C+ +FC+ HR    H C ++E  + +M   Q K+ K+    
Sbjct:    63 PCSFRDCAERELVPIMCPSCEKNFCLRHRHQSDHECEKLEIPKPRMAATQ-KLVKD---- 117

Query:   284 AKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIE 343
                I D +  E  SK     +N   A K+ LMKLK  A GD  +P  +R+YF +  PK  
Sbjct:   118 ---IIDSKTGETTSKRRKGAKNSETAAKVALMKLKMHAAGDKSLPQTERIYFQVFLPK-- 172

Query:   344 PSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRL-FKTSGEPI 398
                 +EK K ++  R WS+GK  DFAA+   + N+N N   + KLRL    SGE +
Sbjct:   173 --GSKEKRKAMFFCRGWSVGKATDFAASLASLKNDN-NRLTAKKLRLCHSVSGEAL 225

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1C263 ZFAND1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 83/237 (35%), Positives = 122/237 (51%)

Query:   168 LGKQCGEPTCKQL--DFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVS 225
             LG+ CG P C+QL  DFLPF CD C  ++C          C E++         +    S
Sbjct:     6 LGQHCGVPDCRQLVSDFLPFVCDGCSGVFC----------CFEHRSRDA--HGCSEQHRS 53

Query:   226 YKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFK 282
             Y CS   C   + + +LC  C+ HFC+ HR    H C +++T + +M   Q ++ K+   
Sbjct:    54 YLCSYKDCQAKELLPVLCPYCEKHFCLRHRHQSDHECEKLDTPKPRMAATQ-QLVKD--- 109

Query:   283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI 342
                +I  K+ E+  SK      N   A K+ LMKLK  A GD  +P A+R+YF +  PK 
Sbjct:   110 ---IIDSKKNEDIKSKKRKGARNSETAAKVALMKLKMHACGDKSLPQAERIYFQVLLPK- 165

Query:   343 EPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRL-FKTSGEPI 398
                  +EK KP++    WS+GKV+D+AA+   + N+N N   + KLRL    SGE +
Sbjct:   166 ---GNKEKSKPMFFCSKWSIGKVVDYAASLASLKNDN-NKSTAQKLRLCHSASGEAL 218

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-040801-269 zfand1 "zinc finger, AN1-type domain 1" [Danio rerio (taxid:7955)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 76/228 (33%), Positives = 114/228 (50%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVS-- 225
             +GK C   +CKQ DFLPF C  C  ++C EH +   H+C E    V +++  + S  S  
Sbjct:     6 IGKHCEIKSCKQKDFLPFVCSSCSGVFCVEHRSRDSHSCPE----VPVKRDVSVSGASTL 61

Query:   226 YKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFK 282
             Y CS   C     + ++C  C+ HFC+ HR    H C ++E  + +M   Q  + K    
Sbjct:    62 YPCSFEDCKGKGLLPVICPHCEKHFCLTHRHQDDHKCEKLEQPKARMAATQELVQK---- 117

Query:   283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKI 342
                 I + +     SK     +N   A K+ LMKLK  A GD  +P A+R YF +  PK 
Sbjct:   118 ----IVESKKNAPPSKGRKGAKNAATAAKVALMKLKMHASGDKGLPQAERTYFQVFLPK- 172

Query:   343 EPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRL 390
                  ++   P++    WS+GK++DFAA++  + N N N   + KLRL
Sbjct:   173 ---DAKDSSLPMFFCSKWSVGKIVDFAASQASLKNNN-NVLAAKKLRL 216

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E1C808 ZFAND1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 77/235 (32%), Positives = 116/235 (49%)

Query:   168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
             LG+ CG P C+QL    F   +C    C   +  +QH   +           +    SY 
Sbjct:     6 LGQHCGVPDCRQL-VSDFLPFVCDG--CSG-VFCLQHRSRDAHG-------CSEQHRSYL 54

Query:   228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFKQA 284
             CS   C   + + +LC  C+ HFC+ HR    H C +++T + +M   Q ++ K+     
Sbjct:    55 CSYKDCQAKELLPVLCPYCEKHFCLRHRHQSDHECEKLDTPKPRMAATQ-QLVKD----- 108

Query:   285 KLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEP 344
              +I  K+ E+  SK      N   A K+ LMKLK  A GD  +P A+R+YF +  PK   
Sbjct:   109 -IIDSKKNEDIKSKKRKGARNSETAAKVALMKLKMHACGDKSLPQAERIYFQVLLPK--- 164

Query:   345 SPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVSAKLRL-FKTSGEPI 398
                +EK KP++    WS+GKV+D+AA+   + N+N N   + KLRL    SGE +
Sbjct:   165 -GNKEKSKPMFFCSKWSIGKVVDYAASLASLKNDN-NKSTAQKLRLCHSASGEAL 217

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	412
pfam05839	89	pfam05839, Apc13p, Apc13p protein	6e-16
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	5e-11
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	2e-04
smart00154	39	smart00154, ZnF_AN1, AN1-like Zinc finger	3e-04

>gnl|CDD|147799 pfam05839, Apc13p, Apc13p protein

 Score = 72.2 bits (177), Expect = 6e-16
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)

Query: 84  MDSQ---VQSQGRLLDIVDNEWKEDKLPSDDISVPQNEL------------PDPDSDNGD 128
           MDS    V        I+D+EW++D+LP DD++VP   L            PD  + NG 
Sbjct: 1   MDSYFTYVHLHAPHHAILDDEWRKDRLPPDDVAVPMPHLQPVNPEEEEDVVPDQHAANGI 60

Query: 129 SHLTLREQESKWTDLALSQL 148
              T +E+E  W DL L +L
Sbjct: 61  QKETQKEKEPAWRDLGLEEL 80

The anaphase-promoting complex (APC) is a conserved multi-subunit ubiquitin ligase required for the degradation of key cell cycle regulators Members of this family are components of the anaphase-promoting complex homologous to Apc13p. Length = 89

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 57.1 bits (138), Expect = 5e-11
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 172 CGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT 207
           C    CK+ DFLPF+C  C   +C +H  P  HNC 
Sbjct: 1   CSFKGCKKKDFLPFKCRFCGGTFCLKHRLPEDHNCP 36

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 3/35 (8%)

Query: 228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HAC 259
           CS  GC   D +   C  C   FC+ HR    H C
Sbjct: 1   CSFKGCKKKDFLPFKCRFCGGTFCLKHRLPEDHNC 35

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|197545 smart00154, ZnF_AN1, AN1-like Zinc finger

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 176 TCKQLDFL-PFQCDLCKNIYCKEHMNPVQHNCTE 208
            C++   L  F+C  C N++C EH  P  H+C  
Sbjct: 3   FCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPG 36

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	412
KOG3183|consensus	250		100.0
PF05839	88	Apc13p: Apc13p protein; InterPro: IPR008401 The an	99.47
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.14
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.06
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	98.22
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	97.38
COG3582	162	Predicted nucleic acid binding protein containing	96.31
KOG3183|consensus	250		95.77
COG3582	162	Predicted nucleic acid binding protein containing	93.74
KOG3173|consensus	167		92.24
PF04236	63	Transp_Tc5_C: Tc5 transposase C-terminal domain; I	80.64

>KOG3183|consensus

Probab=100.00  E-value=2.1e-38  Score=301.01  Aligned_cols=180  Identities=32%  Similarity=0.631  Sum_probs=143.3

Q ss_pred             cccccccccccCcCCCCCcccccccCcccccccccCCCCCCCcccCCCCCc-------------c------------ccC
Q psy16443        162 IMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDN-------------V------------LLE  216 (412)
Q Consensus       162 ~ME~~dIGkHCs~~~C~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~~~~~-------------v------------~~~  216 (412)
                      .|||||+|+||++++|+|||||||+|+.|++.||+|||++++|+||.....             +            .++
T Consensus         1 ~~efpDlGkHCs~~~CkqlDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~~~~v~icp~cs~pv~~~~de~~~~~v~~h   80 (250)
T KOG3183|consen    1 TMEFPDLGKHCSVPYCKQLDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRIDVQVPICPLCSKPVPTKKDEAPDKVVEPH   80 (250)
T ss_pred             CCcccccccccCcchhhhccccceeeCCccchhhhccchHhhcCCCcccccceeecccCCCCCCCCCCCCcchhhhhchh
Confidence            599999999999999999999999999999999999999999999854210             0            000


Q ss_pred             --------CC-CCCccccccCCCCCCCcccccc--cccccccccccCCCCc---cCCCccchHHHHHHHHhhcCchhHHH
Q psy16443        217 --------KP-TTTSIVSYKCSESGCSTLDQVE--MLCEQCKHHFCVGHRF---HACHQVETSRRKMLREQWKIPKEQFK  282 (412)
Q Consensus       217 --------k~-~~~~~~~~~Cs~~~Ck~~~~~~--v~C~~C~k~FCl~HR~---H~C~~~~~~ar~~K~~~~~~~K~q~~  282 (412)
                              .. ......+++|+.++|++++...  +.|.+|+++||++|||   |.|.                      
T Consensus        81 ~~~dC~~~~~~~~~k~~t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~----------------------  138 (250)
T KOG3183|consen   81 ISNDCDRHPEQKKRKVFTNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCN----------------------  138 (250)
T ss_pred             hccccccCchhhhcccccccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhh----------------------
Confidence                    00 0122346779999999988755  8999999999999998   7775                      


Q ss_pred             HHHHHHHHHHHHHHhhhhhccCCchHHHHHHHHhhhccccCCCCCCCCCeEEEEEEccCCCCCCCCCccccEEEecCcch
Q psy16443        283 QAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGDHRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSL  362 (412)
Q Consensus       283 ~ak~~v~~~~~~~l~k~~~~sk~s~~A~KV~LmkLKk~AkGD~kIP~~dRVY~~V~~~~~~~~~~~~~~kpvffsK~WsV  362 (412)
                                                  | +||+||++|.||..+|+++|+|+|++++.+..++..-.+.+-+++|.|+|
T Consensus       139 ----------------------------~-~~~~~k~~a~~~~~~~~q~~~~~~~~~~~s~~~~~~~t~~~~~~~k~~d~  189 (250)
T KOG3183|consen  139 ----------------------------K-QLGNLKKKAGGDKIGPMQNRIYIWTYLSSSSETAKECTRMARYIGKMWDV  189 (250)
T ss_pred             ----------------------------h-hccCccccccccccccccceeeeeEeecCcccccccccccchhhccCccc
Confidence                                        1 67889999999999999999999999977643223345678899999999


Q ss_pred             HhHHHHHHHHcCCccCCCCCCcccceeEec-cCCcccc
Q psy16443        363 GKVIDFAATKLKVVNENRNPGVSAKLRLFK-TSGEPIG  399 (412)
Q Consensus       363 GRvLD~iA~~L~V~N~N~N~~~~~KLrLF~-e~G~~L~  399 (412)
                      |+.||++..      +| |..++.++|.++ ..|+..+
T Consensus       190 ~a~l~~ls~------n~-n~~~~~l~Rs~~~~~~e~~~  220 (250)
T KOG3183|consen  190 GAALDYLSI------NL-NVKSSTLTRSLSQDKGELCP  220 (250)
T ss_pred             chhhHHhhh------cc-ccchHHHHHHhhhhhhhhcc
Confidence            999999853      44 456667788888 6677655

>PF05839 Apc13p: Apc13p protein; InterPro: IPR008401 The anaphase-promoting complex (APC) is a conserved multi-subunit ubiquitin ligase required for the degradation of key cell cycle regulators

Probab=99.47  E-value=8.9e-15  Score=121.79  Aligned_cols=67  Identities=42%  Similarity=0.753  Sum_probs=54.6

Q ss_pred             cccc---cccCCcEEEeccccccccCCCCCCCCCCCCCC------------CCCCCCCCccccccccccchhHHHHHHHH
Q psy16443         84 MDSQ---VQSQGRLLDIVDNEWKEDKLPSDDISVPQNEL------------PDPDSDNGDSHLTLREQESKWTDLALSQL  148 (412)
Q Consensus        84 mds~---~~~~g~liDIVDe~W~~d~LP~Ddi~vP~~~~------------~~~e~d~~ds~~~~~~~e~kW~dLaL~~~  148 (412)
                      |||.   ++.+++++|||||+|++|+||+|||+||...+            |++.++.+..+.+++.+|++|+||||.+|
T Consensus         1 rDS~~~yvh~~~~~~~il~eeW~~D~LP~DdIeip~~~~~~~~pe~ed~~vp~~~~~~g~~~~~~~~~E~~W~Dl~l~~L   80 (88)
T PF05839_consen    1 RDSYFSYVHLDGSHHDILDEEWNQDKLPFDDIEIPLPQLQNVNPEDEDDVVPDQSAAFGNKKNRQKEKEKDWNDLGLEEL   80 (88)
T ss_pred             CCCcceeeecccchHHHHHHHHHhCcCCcccccCcccccCCCCcccccCcCCCccccchhhhhchhcchhhhhhhchhHH
Confidence            5777   89999999999999999999999999994433            22333344455788999999999999998


Q ss_pred             HH
Q psy16443        149 IL  150 (412)
Q Consensus       149 ~~  150 (412)
                      ..
T Consensus        81 ~~   82 (88)
T PF05839_consen   81 MS   82 (88)
T ss_pred             hh
Confidence            76

Members of this family are components of the anaphase-promoting complex homologous to Apc13p [].

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.14  E-value=1.5e-11  Score=89.49  Aligned_cols=38  Identities=45%  Similarity=1.117  Sum_probs=29.6

Q ss_pred             cCcCCCCCcccccccCcccccccccCCCCCCCcccCCC
Q psy16443        172 CGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEY  209 (412)
Q Consensus       172 Cs~~~C~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~~  209 (412)
                      |+++.|+++|||||+|++|++.||.+||.+++|.|+..
T Consensus         1 C~~~~C~~~~~~~~~C~~C~~~FC~~Hr~~e~H~C~~~   38 (43)
T PF01428_consen    1 CSFPGCKKKDFLPFKCKHCGKSFCLKHRLPEDHNCSKL   38 (43)
T ss_dssp             -SSTTT--BCTSHEE-TTTS-EE-TTTHSTTTCT-SST
T ss_pred             CccCcCcCccCCCeECCCCCcccCccccCccccCCcch
Confidence            78999999999999999999999999999999999864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.06  E-value=6.2e-11  Score=85.03  Aligned_cols=35  Identities=37%  Similarity=0.903  Sum_probs=32.9

Q ss_pred             cCcCCCCCcccc-cccCcccccccccCCCCCCCcccCC
Q psy16443        172 CGEPTCKQLDFL-PFQCDLCKNIYCKEHMNPVQHNCTE  208 (412)
Q Consensus       172 Cs~~~C~QLDFL-PF~C~~C~k~FC~eHrs~~aH~C~~  208 (412)
                      |.+  |+++||| ||+|.+|++.||++||.++.|.|+.
T Consensus         1 C~~--C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~   36 (39)
T smart00154        1 CHF--CRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPG   36 (39)
T ss_pred             Ccc--cCCcccccCeECCccCCccccccCCccccCCcc
Confidence            555  9999999 9999999999999999999999975

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.22  E-value=4.1e-07  Score=66.22  Aligned_cols=35  Identities=37%  Similarity=1.010  Sum_probs=26.0

Q ss_pred             CCCCCCCcccccccccccccccccCCCCc---cCCCcc
Q psy16443        228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQV  262 (412)
Q Consensus       228 Cs~~~Ck~~~~~~v~C~~C~k~FCl~HR~---H~C~~~  262 (412)
                      |++++|++.+.+++.|+.|++.||++||+   |.|...
T Consensus         1 C~~~~C~~~~~~~~~C~~C~~~FC~~Hr~~e~H~C~~~   38 (43)
T PF01428_consen    1 CSFPGCKKKDFLPFKCKHCGKSFCLKHRLPEDHNCSKL   38 (43)
T ss_dssp             -SSTTT--BCTSHEE-TTTS-EE-TTTHSTTTCT-SST
T ss_pred             CccCcCcCccCCCeECCCCCcccCccccCccccCCcch
Confidence            78899999999999999999999999999   999854

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=97.38  E-value=8.3e-05  Score=53.48  Aligned_cols=30  Identities=30%  Similarity=0.730  Sum_probs=26.9

Q ss_pred             CCCccccc-ccccccccccccCCCCc---cCCCc
Q psy16443        232 GCSTLDQV-EMLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       232 ~Ck~~~~~-~v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      .|++.+.. ++.|..|++.||++||+   |.|..
T Consensus         3 ~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~   36 (39)
T smart00154        3 FCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPG   36 (39)
T ss_pred             ccCCcccccCeECCccCCccccccCCccccCCcc
Confidence            48888777 99999999999999999   99973

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=96.31  E-value=0.0035  Score=58.14  Aligned_cols=86  Identities=16%  Similarity=0.365  Sum_probs=56.7

Q ss_pred             CCcccccccCcccccccccCCCCCCCcccCCC-----CCcc--------------------cc-----CCC--------C
Q psy16443        178 KQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEY-----KDNV--------------------LL-----EKP--------T  219 (412)
Q Consensus       178 ~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~~-----~~~v--------------------~~-----~k~--------~  219 (412)
                      ..--=||++|+.|.+.||.+|+..--|.|+-.     ...+                    ..     .+.        .
T Consensus         7 ~~~~~lP~r~~~~~kv~s~~~~~~~~~~f~~~i~~~~r~~i~k~~~~~~~~~~p~i~~~~~~~~~~~~~k~s~~~~~~~~   86 (162)
T COG3582           7 VSETRLPSRGNITAKVSSTDNSLTLFSPFKLFIQLCDRKKIKKPDPGQAMKCLPLISSAVSNPSNTDTPKRSTRVPLNGP   86 (162)
T ss_pred             ceeccCCccccceeeeccCccccccccccchhhhhhhhhccccCCCcchhhhcceEEEEeeccccccCcccccccccccc
Confidence            33445899999999999999999888888631     0000                    00     000        0


Q ss_pred             CCcc--ccccCCCCCC-CcccccccccccccccccCCCCc---cCCCccc
Q psy16443        220 TTSI--VSYKCSESGC-STLDQVEMLCEQCKHHFCVGHRF---HACHQVE  263 (412)
Q Consensus       220 ~~~~--~~~~Cs~~~C-k~~~~~~v~C~~C~k~FCl~HR~---H~C~~~~  263 (412)
                      ....  ....|....| ...+..+..|+.|+..||..||+   |.|..+.
T Consensus        87 ~~~~~~~t~~~a~~~~~g~~s~l~~~c~~c~g~fc~~h~lp~nhdc~~L~  136 (162)
T COG3582          87 FDSGKGITDRCATPQCTGKGSTLAGKCNYCTGYFCAEHRLPENHDCNGLG  136 (162)
T ss_pred             cccccccceeeecceeccCCccccccccCCCCcceeceecccccccccHH
Confidence            0000  1235655554 45566788999999999999999   9998543

>KOG3183|consensus

Probab=95.77  E-value=0.0035  Score=61.28  Aligned_cols=40  Identities=33%  Similarity=0.690  Sum_probs=35.9

Q ss_pred             ccCCCCCCCcccccccccccccccccCCCCc---cCCCccchH
Q psy16443        226 YKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETS  265 (412)
Q Consensus       226 ~~Cs~~~Ck~~~~~~v~C~~C~k~FCl~HR~---H~C~~~~~~  265 (412)
                      ..|+.+.|++..+-|++|+.|+..||+.||.   |.|......
T Consensus         9 kHCs~~~CkqlDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~   51 (250)
T KOG3183|consen    9 KHCSVPYCKQLDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRI   51 (250)
T ss_pred             cccCcchhhhccccceeeCCccchhhhccchHhhcCCCccccc
Confidence            5799999999999999999999999999998   999855433

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=93.74  E-value=0.035  Score=51.68  Aligned_cols=37  Identities=24%  Similarity=0.534  Sum_probs=33.2

Q ss_pred             ccCcCCCCCcccccccCcccccccccCCCCCCCcccCCC
Q psy16443        171 QCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEY  209 (412)
Q Consensus       171 HCs~~~C~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~~  209 (412)
                      +|+.  |..---||+.|++|++.||.+||.++.|.|...
T Consensus        99 ~~~~--~g~~s~l~~~c~~c~g~fc~~h~lp~nhdc~~L  135 (162)
T COG3582          99 TPQC--TGKGSTLAGKCNYCTGYFCAEHRLPENHDCNGL  135 (162)
T ss_pred             ccee--ccCCccccccccCCCCcceeceecccccccccH
Confidence            5665  788899999999999999999999999999853

>KOG3173|consensus

Probab=92.24  E-value=0.071  Score=49.67  Aligned_cols=33  Identities=39%  Similarity=1.049  Sum_probs=28.7

Q ss_pred             cCcCCC-CCcccccccCcccccccccCCCCCCCcccC
Q psy16443        172 CGEPTC-KQLDFLPFQCDLCKNIYCKEHMNPVQHNCT  207 (412)
Q Consensus       172 Cs~~~C-~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~  207 (412)
                      |..  | +++.-..|+| -|+.+||..||.++.|.|+
T Consensus       108 C~~--C~kk~gltgf~C-rCG~~fC~~HRy~e~H~C~  141 (167)
T KOG3173|consen  108 CFK--CRKKVGLTGFKC-RCGNTFCGTHRYPEQHDCS  141 (167)
T ss_pred             hhh--hhhhhccccccc-ccCCcccccccCCcccccc
Confidence            665  5 4567779999 9999999999999999997

>PF04236 Transp_Tc5_C: Tc5 transposase C-terminal domain; InterPro: IPR007350 This domain corresponds to a C-terminal cysteine rich region that probably binds to a metal ion and could be DNA-binding

Probab=80.64  E-value=1.1  Score=35.79  Aligned_cols=39  Identities=26%  Similarity=0.697  Sum_probs=33.8

Q ss_pred             cccccccCcCCCCCcccccccCcccccccccCCCCC-CCccc
Q psy16443        166 PQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNP-VQHNC  206 (412)
Q Consensus       166 ~dIGkHCs~~~C~QLDFLPF~C~~C~k~FC~eHrs~-~aH~C  206 (412)
                      .+....|..+.|+.+-|+  +|.+|++.+|-+|+-. +-|.|
T Consensus        24 ~~~~~~C~~~gC~~~s~I--~C~~Ckk~~Cf~Hfiv~~~H~C   63 (63)
T PF04236_consen   24 KNVAGDCDITGCNNTSFI--RCAYCKKSLCFNHFIVSEYHLC   63 (63)
T ss_pred             CCCcCcCCCCCCCCcCEE--EccccCCcccccceeeeeeEcC
Confidence            456677999999999994  8999999999999996 67776

It is found in association with the DDE superfamily (IPR004875 from INTERPRO) and the Tc5 transposase family (IPR004906 from INTERPRO). More information about these proteins can be found at Protein of the Month: Transposase [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	412
1wys_A	75	Solution Structure Of The First Zf-An1 Domain Of Mo		3e-08
1wfe_A	86	Solution Structure Of The 2nd Zf-An1 Domain Of Mous		2e-05

>pdb|1WYS|A Chain A, Solution Structure Of The First Zf-An1 Domain Of Mouse Riken Cdna 2310008m20 Protein Length = 75

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 168 LGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYK 227
           +G+ C    C+Q DFLPF CD C  I+C EH +   H C+E   NV+ E+P T    SY 
Sbjct: 13  IGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEV--NVVKERPKTDEHKSYS 70
Query: 228 CSESG 232
              SG
Sbjct: 71  GPSSG 75

>pdb|1WFE|A Chain A, Solution Structure Of The 2nd Zf-An1 Domain Of Mouse Riken Cdna 2310008m20 Protein Length = 86

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 212 NVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRK 268
           NV+ E+P T    SY CS  GC+ ++ V ++C  C+ +FC+ HR    H C ++E ++ +
Sbjct: 12  NVVKERPKTDEHKSYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLEVAKPR 71
Query: 269 MLREQ 273
           M   Q
Sbjct: 72  MAATQ 76

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	412
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	1e-19
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	2e-04
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	3e-11
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	2e-08
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	2e-08
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	5e-04
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	7e-04

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 75

 Score = 81.6 bits (201), Expect = 1e-19
 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 163 MELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTS 222
           M    +G+ C    C+Q DFLPF CD C  I+C EH +   H C+E   NV+ E+P T  
Sbjct: 8   MAELDIGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEV--NVVKERPKTDE 65

Query: 223 IVSYKCSESG 232
             SY    SG
Sbjct: 66  HKSYSGPSSG 75

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 75

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 228 CSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRK 268
           C    C   D +  +C+ C   FC+ HR    H C +V   + +
Sbjct: 17  CQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVVKER 60

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 86

 Score = 58.3 bits (140), Expect = 3e-11
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 204 HNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACH 260
             C+E   NV+ E+P T    SY CS  GC+ ++ V ++C  C+ +FC+ HR    H C 
Sbjct: 6   SGCSE--VNVVKERPKTDEHKSYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCE 63

Query: 261 QVETSRRKMLREQ 273
           ++E ++ +M   Q
Sbjct: 64  KLEVAKPRMAATQ 76

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 86

 Score = 47.5 bits (112), Expect = 2e-07
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 171 QCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT 207
            C    C  ++ +   C  C+  +C  H +   H+C 
Sbjct: 27  SCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCE 63

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.0 bits (147), Expect = 4e-10
 Identities = 68/454 (14%), Positives = 135/454 (29%), Gaps = 142/454 (31%)

Query: 7   GNCNCQGLIIPIVKR---------EGRQDRKKPPVLRINLICLGSANLALTRLLSISLIY 57
            NCN    ++ ++++           R D      LRI+     S    L RLL  S  Y
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH-----SIQAELRRLLK-SKPY 243

Query: 58  ITRLAIILLDFNDLELTSCFSY-ATILMDSQVQSQGRLLDIVDNEWKEDKLPSDDISVPQ 116
              L ++LL+  + +  + F+    IL+ ++ +    + D +        +  D  S+  
Sbjct: 244 ENCL-LVLLNVQNAKAWNAFNLSCKILLTTRFKQ---VTDFLSAA-TTTHISLDHHSMT- 297

Query: 117 NELPDPDSDNGDSHLTLREQESKWTDLALSQLILFLNSQQHFVIFIMELPQLGKQCGEPT 176
                         LT  E          S L+ +L+ +        +LP+         
Sbjct: 298 --------------LTPDE--------VKSLLLKYLDCR------PQDLPREVLTTN--- 326

Query: 177 CKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTL 236
                  P +  +      ++ +    +    +K +V  +K TT    S          L
Sbjct: 327 -------PRRLSIIAES-IRDGLATWDN----WK-HVNCDKLTTIIESSLNV-------L 366

Query: 237 DQVEMLCEQCKHHFCVGHRFHACHQVETSRRKMLREQWKIPKEQFK----QAKLIADKQI 292
           +  E               F            +      IP                  +
Sbjct: 367 EPAEYR-----------KMFDRL--------SVFPPSAHIPTILLSLIWFDVIKSDVMVV 407

Query: 293 EEKLSK---AEIQTENRPLALKLRLMKLKSKAVGD---HR------------------IP 328
             KL K    E Q +   +++    ++LK K   +   HR                   P
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467

Query: 329 TADR-VYFNI--HAPKIEPSPGQEKCKPIYVSRDWSLGKVIDFAATKLKVVNENRNPGVS 385
             D+  Y +I  H   IE        + +++           F   K++  +   N   S
Sbjct: 468 YLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD--------FRFLEQKIRHDSTAWNASGS 519

Query: 386 -----AKLRLFK---TSGEPIGDEFSQILGELIK 411
                 +L+ +K      +P   ++ +++  ++ 
Sbjct: 520 ILNTLQQLKFYKPYICDNDP---KYERLVNAILD 550

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 4e-06
 Identities = 57/402 (14%), Positives = 106/402 (26%), Gaps = 152/402 (37%)

Query: 66  LDFNDLE--LTSCFS---YATILMDSQVQSQG-RLLDIV------------------DNE 101
            D  D++    S  S      I+M     S   RL   +                  + +
Sbjct: 33  FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92

Query: 102 W------KEDKLPSDDISVPQNELPDPDSDN---GDSHLTLREQESKWTDLALSQLILFL 152
           +       E + PS    +   +     +DN      +++ R Q      L L Q +L L
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS-RLQPY----LKLRQALLEL 147

Query: 153 NSQQHFVIFIMELPQLGKQC--GEPTCKQLDFLPFQCDLCKNIY------CKEHMNPVQH 204
              ++ +I  +     GK     +  C        QC +   I+      C         
Sbjct: 148 RPAKNVLIDGV--LGSGKTWVALD-VCLSYKV---QCKMDFKIFWLNLKNCNS------- 194

Query: 205 NCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRFHACHQVET 264
                    +LE                   +D       +  H   +  R H    ++ 
Sbjct: 195 ------PETVLEMLQKL-----------LYQIDP--NWTSRSDHSSNIKLRIH---SIQA 232

Query: 265 SRRKMLREQWKIPKEQFKQAKLIADKQIEEKLSKAEIQTENRPLALKLRLMKLKSKAVGD 324
             R++L+ +       ++   L+                                  V +
Sbjct: 233 ELRRLLKSK------PYENCLLVLLN-------------------------------VQN 255

Query: 325 HRIPTADRVYFNIHAPKIEPSPGQEKCKPIYVSRDWSLGKVIDF--AATKLKVVNENRNP 382
            +   A    FN+             CK +  +R      V DF  AAT   +  ++ + 
Sbjct: 256 AKAWNA----FNL------------SCKILLTTRFKQ---VTDFLSAATTTHISLDHHSM 296

Query: 383 GVSAK--LRLF-KTSGEPIGDEFSQ----------ILGELIK 411
            ++      L  K       D   +          I+ E I+
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 216 EKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQVETSRRKM 269
              +   I + KC  +GC   + +++ CE+C  +FC+ HR    H C          
Sbjct: 3   SGSSGRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSSG 59

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63

 Score = 49.6 bits (118), Expect = 2e-08
 Identities = 10/37 (27%), Positives = 21/37 (56%)

Query: 171 QCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT 207
           +C    C+Q + +   C+ C   +C +H +P+ H+C+
Sbjct: 14  KCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCS 50

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 37.1 bits (86), Expect = 5e-04
 Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 176 TC-KQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYK 210
           +C K++  + F+C  C + +C  H  P +H C+ ++K
Sbjct: 20  SCNKKVGVMGFKCK-CGSTFCGSHRYPEKHECSFDFK 55

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 36.7 bits (85), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 176 TC-KQLDFLPFQCDLCKNIYCKEHMNPVQHNCT 207
            C K++    F C  C   +C  H  P  H CT
Sbjct: 20  VCRKRVGLTGFMCR-CGTTFCGSHRYPEVHGCT 51

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	412
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.79
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.26
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.09
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	98.91
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	98.36
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	98.32
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	98.27
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	98.16
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	98.13
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	98.1
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	98.1
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	98.06
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	97.64
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	97.53
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	97.35
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	97.31
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	97.25
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	97.16

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.79  E-value=6.6e-20  Score=147.33  Aligned_cols=72  Identities=36%  Similarity=0.644  Sum_probs=59.5

Q ss_pred             ccccccccccccccCcCCCCCcccccccCcccccccccCCCCCCCcccCCCCCccccCCCCCCccccccCCCCC
Q psy16443        159 VIFIMELPQLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESG  232 (412)
Q Consensus       159 ~~~~ME~~dIGkHCs~~~C~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~~~~~v~~~k~~~~~~~~~~Cs~~~  232 (412)
                      ....|||+++|+||++++|+|+|||||+|++|+++||++||.+++|.|+.......  ++......+++|++.+
T Consensus         4 ~~~~m~~~~~g~~Cs~~~C~~~dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~~~~--~~~~~~~~~~~Cs~~~   75 (75)
T 1wys_A            4 GSSGMAELDIGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVVKE--RPKTDEHKSYSGPSSG   75 (75)
T ss_dssp             CCCCCCCCCCCCCCSCTTTCCCSCCCEECTTTCCEECSTTCSSGGGTCCCCSSCSS--CCCCCCCCCCCCSCCC
T ss_pred             ccccccccccCCCcCcccCCCccceeeECcccCcCcCcccCCccccCCCCCccccc--cccCCCCcceecccCC
Confidence            45789999999999999999999999999999999999999999999997644222  1223445678898764

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.26  E-value=1.3e-12  Score=101.83  Aligned_cols=43  Identities=23%  Similarity=0.814  Sum_probs=40.5

Q ss_pred             ccccccCcCCCCCcccccccCcccccccccCCCCCCCcccCCC
Q psy16443        167 QLGKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEY  209 (412)
Q Consensus       167 dIGkHCs~~~C~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~~  209 (412)
                      ..+.+|+++.|+++|||||+|.+|++.||++||.++.|.|+..
T Consensus        10 ~~~~~Cs~~~Ck~~~ll~f~C~~C~~~FC~~HR~~e~H~C~~~   52 (63)
T 1x4v_A           10 IFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGE   52 (63)
T ss_dssp             TTCCCCCSTTCCCCCSSCCBCSSSCCBCCHHHHSTTSSCCCST
T ss_pred             ccCCCCCccCCCCCCccceECCCCCcccCcccCCccCCcCCCC
Confidence            3588999999999999999999999999999999999999864

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.09  E-value=2.4e-11  Score=99.91  Aligned_cols=40  Identities=20%  Similarity=0.718  Sum_probs=38.4

Q ss_pred             cccCcCCCCCcccccccCcccccccccCCCCCCCcccCCC
Q psy16443        170 KQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEY  209 (412)
Q Consensus       170 kHCs~~~C~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~~  209 (412)
                      .+|++++|+++|||||.|.+|++.||++||.+++|.|+..
T Consensus        26 ~~C~~~~Ck~~~~l~f~C~~C~~~FC~~HR~~e~H~C~~~   65 (86)
T 1wfe_A           26 YSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKL   65 (86)
T ss_dssp             EECCSTTCCCEESSCEECTTTCCEECGGGCSTGGGTCSSS
T ss_pred             CCCCCcCCCCCCccceECCCCCcccccccCCccCCCCCCC
Confidence            5799999999999999999999999999999999999865

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=98.91  E-value=6.5e-10  Score=91.36  Aligned_cols=61  Identities=31%  Similarity=0.707  Sum_probs=48.3

Q ss_pred             CCCCcccCCCCCccccCCCCCCccccccCCCCCCCcccccccccccccccccCCCCc---cCCCcc
Q psy16443        200 NPVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQV  262 (412)
Q Consensus       200 s~~aH~C~~~~~~v~~~k~~~~~~~~~~Cs~~~Ck~~~~~~v~C~~C~k~FCl~HR~---H~C~~~  262 (412)
                      ++++|.||..+......+  ..+...++|++++|++.++.++.|..|++.||++||+   |.|..+
T Consensus         2 ~~~sh~C~~~~~~~~~~~--~~~~~~~~C~~~~Ck~~~~l~f~C~~C~~~FC~~HR~~e~H~C~~~   65 (86)
T 1wfe_A            2 SSGSSGCSEVNVVKERPK--TDEHKSYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKL   65 (86)
T ss_dssp             CCCCCCCCCCCCCCCCCC--CSCSCCEECCSTTCCCEESSCEECTTTCCEECGGGCSTGGGTCSSS
T ss_pred             CcccCcCCCccccccccc--ccCCCCCCCCCcCCCCCCccceECCCCCcccccccCCccCCCCCCC
Confidence            468999998754322222  1234458999999999999999999999999999999   999843

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.36  E-value=1e-07  Score=74.22  Aligned_cols=38  Identities=34%  Similarity=1.011  Sum_probs=35.5

Q ss_pred             ccccCCCCCCCcccccccccccccccccCCCCc---cCCCc
Q psy16443        224 VSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~~~~~v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      ..++|++++|++.+++++.|..|++.||++||+   |.|..
T Consensus        11 ~~~~Cs~~~Ck~~~ll~f~C~~C~~~FC~~HR~~e~H~C~~   51 (63)
T 1x4v_A           11 FTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSG   51 (63)
T ss_dssp             TCCCCCSTTCCCCCSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred             cCCCCCccCCCCCCccceECCCCCcccCcccCCccCCcCCC
Confidence            358999999999999999999999999999999   99984

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.32  E-value=2.3e-07  Score=72.44  Aligned_cols=36  Identities=28%  Similarity=0.890  Sum_probs=32.9

Q ss_pred             cccCcCCCCC-cccccccCcccccccccCCCCCCCcccCC
Q psy16443        170 KQCGEPTCKQ-LDFLPFQCDLCKNIYCKEHMNPVQHNCTE  208 (412)
Q Consensus       170 kHCs~~~C~Q-LDFLPF~C~~C~k~FC~eHrs~~aH~C~~  208 (412)
                      .+|+.  |++ +.+++|+| .|+++||+.||.++.|.|+-
T Consensus        16 ~rC~~--C~kkvgl~~f~C-rCg~~FC~~HR~~e~H~C~f   52 (64)
T 1wg2_A           16 NRCFS--CNKKVGVMGFKC-KCGSTFCGSHRYPEKHECSF   52 (64)
T ss_dssp             CSCTT--TCCCCTTSCEEC-TTSCEECSSSCSSTTTTCCC
T ss_pred             CcChh--hCCcccccCeEe-ecCCEecccCCCccccCCCc
Confidence            57985  998 69999999 89999999999999999974

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.27  E-value=3.2e-07  Score=71.56  Aligned_cols=36  Identities=31%  Similarity=0.855  Sum_probs=32.7

Q ss_pred             cccCcCCCCC-cccccccCcccccccccCCCCCCCcccCC
Q psy16443        170 KQCGEPTCKQ-LDFLPFQCDLCKNIYCKEHMNPVQHNCTE  208 (412)
Q Consensus       170 kHCs~~~C~Q-LDFLPF~C~~C~k~FC~eHrs~~aH~C~~  208 (412)
                      .+|+.  |++ +.+++|+| .|+++||+.||.++.|.|+-
T Consensus        16 ~rC~~--C~kkvgl~~f~C-rCg~~FC~~HRy~e~H~C~f   52 (64)
T 1wfh_A           16 NRCTV--CRKRVGLTGFMC-RCGTTFCGSHRYPEVHGCTF   52 (64)
T ss_dssp             CCCTT--TCCCCCTTCEEC-SSSCEECTTTCSTTTTTCCC
T ss_pred             CcChh--hCCccCccCEEe-ecCCEeccccCCcccCCCCc
Confidence            57985  998 69999999 69999999999999999973

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.16  E-value=7.7e-07  Score=71.20  Aligned_cols=36  Identities=28%  Similarity=0.824  Sum_probs=32.3

Q ss_pred             cccCcCCCC-CcccccccCcccccccccCCCCCCCcccCC
Q psy16443        170 KQCGEPTCK-QLDFLPFQCDLCKNIYCKEHMNPVQHNCTE  208 (412)
Q Consensus       170 kHCs~~~C~-QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~  208 (412)
                      .+|+.  |+ ++.+++|+| .|+++||+.||.++.|.|+-
T Consensus        26 ~RC~~--C~kkvgL~~f~C-rCg~~FCs~HRy~e~H~C~f   62 (74)
T 1wfp_A           26 TRCLS--CNKKVGVTGFKC-RCGSTFCGTHRYPESHECQF   62 (74)
T ss_dssp             CBCSS--SCCBCTTTCEEC-TTSCEECTTTCSTTTSCCCS
T ss_pred             ccchh--hcCcccccceEe-ccCCEeccccCCCcCCCCcC
Confidence            47985  98 559999999 79999999999999999974

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=98.13  E-value=9.4e-07  Score=70.93  Aligned_cols=38  Identities=32%  Similarity=0.836  Sum_probs=35.4

Q ss_pred             cccCCCCCCCcccccccccccccccccCCCCc---cCCCcc
Q psy16443        225 SYKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQV  262 (412)
Q Consensus       225 ~~~Cs~~~Ck~~~~~~v~C~~C~k~FCl~HR~---H~C~~~  262 (412)
                      .++|++..|++..+.|+.|+.|++.||+.||+   |.|...
T Consensus        14 g~~Cs~~~C~~~dflpf~C~~C~~~FC~~HR~~e~H~C~~~   54 (75)
T 1wys_A           14 GQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEV   54 (75)
T ss_dssp             CCCCSCTTTCCCSCCCEECTTTCCEECSTTCSSGGGTCCCC
T ss_pred             CCCcCcccCCCccceeeECcccCcCcCcccCCccccCCCCC
Confidence            47899999999999999999999999999999   999844

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=98.10  E-value=1e-06  Score=72.24  Aligned_cols=37  Identities=30%  Similarity=0.728  Sum_probs=32.6

Q ss_pred             ccccCcCCCCC-cccc-cccCcccccccccCCCCCCCcccCC
Q psy16443        169 GKQCGEPTCKQ-LDFL-PFQCDLCKNIYCKEHMNPVQHNCTE  208 (412)
Q Consensus       169 GkHCs~~~C~Q-LDFL-PF~C~~C~k~FC~eHrs~~aH~C~~  208 (412)
                      ..+|..  |++ +.++ ||+|. |++.||+.||.++.|.|+-
T Consensus        25 ~~rC~~--C~kkvgl~~~f~Cr-Cg~~FC~~HRy~e~H~C~f   63 (85)
T 1wff_A           25 MKHCFL--CGKKTGLATSFECR-CGNNFCASHRYAEAHGCNY   63 (85)
T ss_dssp             CCBCSS--SCCBCSSSSCEECT-TCCEECTTTCSTGGGTCCS
T ss_pred             Cccchh--hCCeecccCCeEcC-CCCEecccCCCccCCCCcc
Confidence            358998  998 6665 99995 9999999999999999974

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.10  E-value=9.4e-07  Score=69.55  Aligned_cols=36  Identities=33%  Similarity=0.687  Sum_probs=33.9

Q ss_pred             cccCcCCCCCccccc----ccCcccccccccCCCCCCCcccCC
Q psy16443        170 KQCGEPTCKQLDFLP----FQCDLCKNIYCKEHMNPVQHNCTE  208 (412)
Q Consensus       170 kHCs~~~C~QLDFLP----F~C~~C~k~FC~eHrs~~aH~C~~  208 (412)
                      .+|.+  |++...||    |+| .|+.+||+.||.++.|.|+-
T Consensus        16 ~rC~~--C~kk~gL~~~egf~C-rCg~~FC~~HRy~e~H~C~f   55 (67)
T 1x4w_A           16 RRCFQ--CQTKLELVQQELGSC-RCGYVFCMLHRLPEQHDCTF   55 (67)
T ss_dssp             TBCSS--SCCBCCHHHHHHHCC-SSSCCCCTTTCSTGGGTCSS
T ss_pred             Ccchh--hCCeecccccCceEe-cCCCEehhccCCccccCCcc
Confidence            47998  99999999    999 99999999999999999973

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=98.06  E-value=1.8e-06  Score=69.13  Aligned_cols=36  Identities=31%  Similarity=0.858  Sum_probs=33.2

Q ss_pred             cccCcCCCCC-cccccccCcccccccccCCCCCCCcccCC
Q psy16443        170 KQCGEPTCKQ-LDFLPFQCDLCKNIYCKEHMNPVQHNCTE  208 (412)
Q Consensus       170 kHCs~~~C~Q-LDFLPF~C~~C~k~FC~eHrs~~aH~C~~  208 (412)
                      .+|.+  |++ +.++||.|. |++.||+.||.++.|.|+-
T Consensus        26 nRC~~--CrKkvgL~gf~Cr-Cg~~FCs~HRy~e~H~C~f   62 (74)
T 1wfl_A           26 NRCFM--CRKKVGLTGFDCR-CGNLFCGLHRYSDKHNCPY   62 (74)
T ss_dssp             TBCSS--SCCBCGGGCEECT-TSCEECSSSCSTTTTTCCC
T ss_pred             CcChh--hCCcccccCeecC-CCCEechhcCCCccCCCcc
Confidence            37998  999 499999998 9999999999999999974

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=97.64  E-value=2.7e-05  Score=60.76  Aligned_cols=35  Identities=29%  Similarity=0.836  Sum_probs=30.2

Q ss_pred             ccccCCCCCCCcc-cccccccccccccccCCCCc---cCCCc
Q psy16443        224 VSYKCSESGCSTL-DQVEMLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~-~~~~v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      ..++|+  .|+++ .+.++.| +|+..||.+|||   |.|..
T Consensus        14 ~~~rC~--~C~kkvgl~~f~C-rCg~~FC~~HR~~e~H~C~f   52 (64)
T 1wg2_A           14 PNNRCF--SCNKKVGVMGFKC-KCGSTFCGSHRYPEKHECSF   52 (64)
T ss_dssp             CSCSCT--TTCCCCTTSCEEC-TTSCEECSSSCSSTTTTCCC
T ss_pred             cCCcCh--hhCCcccccCeEe-ecCCEecccCCCccccCCCc
Confidence            457898  89986 5568999 899999999999   99973

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=97.53  E-value=4.3e-05  Score=59.64  Aligned_cols=35  Identities=29%  Similarity=0.857  Sum_probs=30.1

Q ss_pred             ccccCCCCCCCcc-cccccccccccccccCCCCc---cCCCc
Q psy16443        224 VSYKCSESGCSTL-DQVEMLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~-~~~~v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      ..++|+  .|+++ .+.++.| +|+..||.+|||   |+|..
T Consensus        14 ~~~rC~--~C~kkvgl~~f~C-rCg~~FC~~HRy~e~H~C~f   52 (64)
T 1wfh_A           14 RPNRCT--VCRKRVGLTGFMC-RCGTTFCGSHRYPEVHGCTF   52 (64)
T ss_dssp             SCCCCT--TTCCCCCTTCEEC-SSSCEECTTTCSTTTTTCCC
T ss_pred             cCCcCh--hhCCccCccCEEe-ecCCEeccccCCcccCCCCc
Confidence            357898  89986 5678999 799999999999   99983

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=97.35  E-value=9.6e-05  Score=59.16  Aligned_cols=36  Identities=28%  Similarity=0.801  Sum_probs=30.6

Q ss_pred             cccccCCCCCCCcc-cccccccccccccccCCCCc---cCCCc
Q psy16443        223 IVSYKCSESGCSTL-DQVEMLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       223 ~~~~~Cs~~~Ck~~-~~~~v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      ...++|+  .|+++ .+.++.| +|+..||.+|||   |.|..
T Consensus        23 ~~~~RC~--~C~kkvgL~~f~C-rCg~~FCs~HRy~e~H~C~f   62 (74)
T 1wfp_A           23 STATRCL--SCNKKVGVTGFKC-RCGSTFCGTHRYPESHECQF   62 (74)
T ss_dssp             CCCCBCS--SSCCBCTTTCEEC-TTSCEECTTTCSTTTSCCCS
T ss_pred             ccCccch--hhcCcccccceEe-ccCCEeccccCCCcCCCCcC
Confidence            3458898  89976 5578999 899999999999   99984

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=97.31  E-value=0.00014  Score=58.27  Aligned_cols=35  Identities=29%  Similarity=0.701  Sum_probs=30.6

Q ss_pred             ccccCCCCCCCcc-cccccccccccccccCCCCc---cCCCc
Q psy16443        224 VSYKCSESGCSTL-DQVEMLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~-~~~~v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      ..++|..  |+++ .+.++.|. |+..||..|||   |.|..
T Consensus        24 ~~nRC~~--CrKkvgL~gf~Cr-Cg~~FCs~HRy~e~H~C~f   62 (74)
T 1wfl_A           24 KKNRCFM--CRKKVGLTGFDCR-CGNLFCGLHRYSDKHNCPY   62 (74)
T ss_dssp             CTTBCSS--SCCBCGGGCEECT-TSCEECSSSCSTTTTTCCC
T ss_pred             cCCcChh--hCCcccccCeecC-CCCEechhcCCCccCCCcc
Confidence            3578984  9986 77899999 99999999999   99984

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.25  E-value=0.00015  Score=57.11  Aligned_cols=35  Identities=31%  Similarity=0.725  Sum_probs=29.9

Q ss_pred             ccccCCCCCCCcccccc----cccccccccccCCCCc---cCCCc
Q psy16443        224 VSYKCSESGCSTLDQVE----MLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~~~~~----v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      ..++|..  |+++...+    +.| +|+..||..|||   |.|..
T Consensus        14 ~~~rC~~--C~kk~gL~~~egf~C-rCg~~FC~~HRy~e~H~C~f   55 (67)
T 1x4w_A           14 SRRRCFQ--CQTKLELVQQELGSC-RCGYVFCMLHRLPEQHDCTF   55 (67)
T ss_dssp             CTTBCSS--SCCBCCHHHHHHHCC-SSSCCCCTTTCSTGGGTCSS
T ss_pred             cCCcchh--hCCeecccccCceEe-cCCCEehhccCCccccCCcc
Confidence            3578984  99987755    899 999999999999   99983

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=97.16  E-value=0.00019  Score=58.80  Aligned_cols=35  Identities=29%  Similarity=0.883  Sum_probs=29.6

Q ss_pred             ccccCCCCCCCccccc--ccccccccccccCCCCc---cCCCc
Q psy16443        224 VSYKCSESGCSTLDQV--EMLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~~~~--~v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      ..++|..  |+++...  ++.|. |+..||.+|||   |.|..
T Consensus        24 ~~~rC~~--C~kkvgl~~~f~Cr-Cg~~FC~~HRy~e~H~C~f   63 (85)
T 1wff_A           24 IMKHCFL--CGKKTGLATSFECR-CGNNFCASHRYAEAHGCNY   63 (85)
T ss_dssp             CCCBCSS--SCCBCSSSSCEECT-TCCEECTTTCSTGGGTCCS
T ss_pred             cCccchh--hCCeecccCCeEcC-CCCEecccCCCccCCCCcc
Confidence            3578985  9987654  99995 99999999999   99984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	412
d1wfea_	86	g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mous	2e-12
d1wfea_	86	g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mous	2e-10
d1wfla_	74	g.80.1.1 (A:) Zinc finger A20 domain containing pr	1e-04
d1wfpa_	74	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	1e-04
d1wfha_	64	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	2e-04

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 86

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.4 bits (146), Expect = 2e-12
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 6/66 (9%)

Query: 170 KQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYKDNVLLEKPTTTSIVSYKCS 229
             C    C  ++ +   C  C+  +C  H +   H+C +      LE        + K  
Sbjct: 26  YSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEK------LEVAKPRMAATQKLV 79

Query: 230 ESGCST 235
            SG S+
Sbjct: 80  RSGPSS 85

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 86

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.6 bits (131), Expect = 2e-10
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)

Query: 203 QHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HAC 259
              C+E   NV+ E+P T    SY CS  GC+ ++ V ++C  C+ +FC+ HR    H C
Sbjct: 5   SSGCSEV--NVVKERPKTDEHKSYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDC 62

Query: 260 HQVETSRRKM 269
            ++E ++ +M
Sbjct: 63  EKLEVAKPRM 72

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 178 KQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYK 210
           K++    F C  C N++C  H    +HNC  +YK
Sbjct: 33  KKVGLTGFDCR-CGNLFCGLHRYSDKHNCPYDYK 65

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 176 TCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYK 210
           +C +   +      C + +C  H  P  H C  ++K
Sbjct: 30  SCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFK 65

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 178 KQLDFLPFQCDLCKNIYCKEHMNPVQHNCT-EYK 210
           K++    F C  C   +C  H  P  H CT ++K
Sbjct: 23  KRVGLTGFMCR-CGTTFCGSHRYPEVHGCTFDFK 55

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	412
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	99.22
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	98.76
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	97.72
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	97.55
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	97.55
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	97.27
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	96.42
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	96.4
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	95.86
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	95.52
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	85.71
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	82.33
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	82.1
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	81.6

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=2.6e-12  Score=103.68  Aligned_cols=42  Identities=19%  Similarity=0.696  Sum_probs=38.7

Q ss_pred             ccccCcCCCCCcccccccCcccccccccCCCCCCCcccCCCC
Q psy16443        169 GKQCGEPTCKQLDFLPFQCDLCKNIYCKEHMNPVQHNCTEYK  210 (412)
Q Consensus       169 GkHCs~~~C~QLDFLPF~C~~C~k~FC~eHrs~~aH~C~~~~  210 (412)
                      ...|+++.|+++|||||+|++|++.||.+||.+++|.|+...
T Consensus        25 ~~~Cs~~~C~~~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~~~   66 (86)
T d1wfea_          25 SYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLE   66 (86)
T ss_dssp             CEECCSTTCCCEESSCEECTTTCCEECGGGCSTGGGTCSSSS
T ss_pred             cCcCCCCCCCCcccCcccchhhCcchhhccCCccCCCCCCCC
Confidence            345999999999999999999999999999999999998653

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=2e-09  Score=86.55  Aligned_cols=60  Identities=32%  Similarity=0.713  Sum_probs=47.3

Q ss_pred             CCCcccCCCCCccccCCCCCCccccccCCCCCCCcccccccccccccccccCCCCc---cCCCcc
Q psy16443        201 PVQHNCTEYKDNVLLEKPTTTSIVSYKCSESGCSTLDQVEMLCEQCKHHFCVGHRF---HACHQV  262 (412)
Q Consensus       201 ~~aH~C~~~~~~v~~~k~~~~~~~~~~Cs~~~Ck~~~~~~v~C~~C~k~FCl~HR~---H~C~~~  262 (412)
                      ..+|.|+..+..-...+  ......+.|++++|++.+++|+.|+.|+++||++||+   |.|..+
T Consensus         3 ~~s~~c~~~~~~~~~~k--~~~~~~~~Cs~~~C~~~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~~   65 (86)
T d1wfea_           3 SGSSGCSEVNVVKERPK--TDEHKSYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKL   65 (86)
T ss_dssp             CCCCCCCCCCCCCCCCC--CSCSCCEECCSTTCCCEESSCEECTTTCCEECGGGCSTGGGTCSSS
T ss_pred             CcCCCCCcccccccCcc--cCCCccCcCCCCCCCCcccCcccchhhCcchhhccCCccCCCCCCC
Confidence            46899987653322222  2344568899999999999999999999999999999   999843

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=6.6e-06  Score=63.95  Aligned_cols=35  Identities=31%  Similarity=0.890  Sum_probs=31.8

Q ss_pred             cccCcCCCC-CcccccccCcccccccccCCCCCCCcccC
Q psy16443        170 KQCGEPTCK-QLDFLPFQCDLCKNIYCKEHMNPVQHNCT  207 (412)
Q Consensus       170 kHCs~~~C~-QLDFLPF~C~~C~k~FC~eHrs~~aH~C~  207 (412)
                      ..|.+  |+ .|..++|.| .|++.||..||.++.|+|+
T Consensus        26 ~RC~~--C~KKl~l~~~~C-rCg~~FC~~HR~pe~H~Ct   61 (74)
T d1wfla_          26 NRCFM--CRKKVGLTGFDC-RCGNLFCGLHRYSDKHNCP   61 (74)
T ss_dssp             TBCSS--SCCBCGGGCEEC-TTSCEECSSSCSTTTTTCC
T ss_pred             CcChh--hCCcccceeeEc-cCCCEehhhcCCCcCcCCC
Confidence            47998  98 567889999 6999999999999999997

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.55  E-value=1.6e-05  Score=61.76  Aligned_cols=36  Identities=28%  Similarity=0.864  Sum_probs=31.2

Q ss_pred             ccccCcCCCCC-cccccccCcccccccccCCCCCCCcccC
Q psy16443        169 GKQCGEPTCKQ-LDFLPFQCDLCKNIYCKEHMNPVQHNCT  207 (412)
Q Consensus       169 GkHCs~~~C~Q-LDFLPF~C~~C~k~FC~eHrs~~aH~C~  207 (412)
                      ...|.+  |++ +-.+.|.| .|++.||..||.++.|+|+
T Consensus        25 k~RC~~--C~KKl~l~~~~C-rCg~~FC~~HR~pe~H~C~   61 (74)
T d1wfpa_          25 ATRCLS--CNKKVGVTGFKC-RCGSTFCGTHRYPESHECQ   61 (74)
T ss_dssp             CCBCSS--SCCBCTTTCEEC-TTSCEECTTTCSTTTSCCC
T ss_pred             CCcChh--cCCccCCCceec-CCCChhhhccCCccCcCCC
Confidence            457998  994 45667999 7999999999999999997

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=1.9e-05  Score=62.81  Aligned_cols=35  Identities=34%  Similarity=0.783  Sum_probs=31.7

Q ss_pred             cccCcCCCCCcccc--cccCcccccccccCCCCCCCcccC
Q psy16443        170 KQCGEPTCKQLDFL--PFQCDLCKNIYCKEHMNPVQHNCT  207 (412)
Q Consensus       170 kHCs~~~C~QLDFL--PF~C~~C~k~FC~eHrs~~aH~C~  207 (412)
                      ..|.+  |+..=-|  +|.| .|++.||..||.++.|.|+
T Consensus        26 ~RC~~--C~KKl~l~~~~~C-rCg~~FC~~HR~pe~H~Ct   62 (85)
T d1wffa_          26 KHCFL--CGKKTGLATSFEC-RCGNNFCASHRYAEAHGCN   62 (85)
T ss_dssp             CBCSS--SCCBCSSSSCEEC-TTCCEECTTTCSTGGGTCC
T ss_pred             CcChh--cCCeecCCcCeec-CCCCEehhhcCCCcCcCCC
Confidence            57998  9987766  8999 5999999999999999997

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.27  E-value=6.2e-05  Score=56.88  Aligned_cols=35  Identities=31%  Similarity=0.879  Sum_probs=30.7

Q ss_pred             cccCcCCCCCc-ccccccCcccccccccCCCCCCCcccC
Q psy16443        170 KQCGEPTCKQL-DFLPFQCDLCKNIYCKEHMNPVQHNCT  207 (412)
Q Consensus       170 kHCs~~~C~QL-DFLPF~C~~C~k~FC~eHrs~~aH~C~  207 (412)
                      ..|.+  |+.. ..++|+| .|++.||..||.++.|+|+
T Consensus        16 ~RC~~--C~KKl~l~~~~C-rCg~~FC~~HR~pe~H~Ct   51 (64)
T d1wfha_          16 NRCTV--CRKRVGLTGFMC-RCGTTFCGSHRYPEVHGCT   51 (64)
T ss_dssp             CCCTT--TCCCCCTTCEEC-SSSCEECTTTCSTTTTTCC
T ss_pred             CcChh--hCCCccceeeec-cCCCEehhhcCCCcCcCCC
Confidence            47988  9865 5669999 5999999999999999997

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.42  E-value=0.001  Score=51.35  Aligned_cols=34  Identities=29%  Similarity=0.749  Sum_probs=28.5

Q ss_pred             ccccCCCCCCCcc-cccccccccccccccCCCCc---cCCC
Q psy16443        224 VSYKCSESGCSTL-DQVEMLCEQCKHHFCVGHRF---HACH  260 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~-~~~~v~C~~C~k~FCl~HR~---H~C~  260 (412)
                      ..++|.+  |+++ .++++.| +|+..||..||+   |+|.
T Consensus        24 k~~RC~~--C~KKl~l~~~~C-rCg~~FC~~HR~pe~H~Ct   61 (74)
T d1wfla_          24 KKNRCFM--CRKKVGLTGFDC-RCGNLFCGLHRYSDKHNCP   61 (74)
T ss_dssp             CTTBCSS--SCCBCGGGCEEC-TTSCEECSSSCSTTTTTCC
T ss_pred             CCCcChh--hCCcccceeeEc-cCCCEehhhcCCCcCcCCC
Confidence            3478984  9876 4678999 599999999999   9998

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.40  E-value=0.00086  Score=50.44  Aligned_cols=34  Identities=29%  Similarity=0.881  Sum_probs=28.6

Q ss_pred             ccccCCCCCCCccc-ccccccccccccccCCCCc---cCCC
Q psy16443        224 VSYKCSESGCSTLD-QVEMLCEQCKHHFCVGHRF---HACH  260 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~~-~~~v~C~~C~k~FCl~HR~---H~C~  260 (412)
                      ...+|.+  |+++. ++.+.|. |+..||..||+   |+|.
T Consensus        14 k~~RC~~--C~KKl~l~~~~Cr-Cg~~FC~~HR~pe~H~Ct   51 (64)
T d1wfha_          14 RPNRCTV--CRKRVGLTGFMCR-CGTTFCGSHRYPEVHGCT   51 (64)
T ss_dssp             SCCCCTT--TCCCCCTTCEECS-SSCEECTTTCSTTTTTCC
T ss_pred             CCCcChh--hCCCccceeeecc-CCCEehhhcCCCcCcCCC
Confidence            3478984  99875 5689995 99999999999   9998

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.86  E-value=0.0022  Score=49.41  Aligned_cols=34  Identities=29%  Similarity=0.859  Sum_probs=27.5

Q ss_pred             ccccCCCCCCCccc-ccccccccccccccCCCCc---cCCC
Q psy16443        224 VSYKCSESGCSTLD-QVEMLCEQCKHHFCVGHRF---HACH  260 (412)
Q Consensus       224 ~~~~Cs~~~Ck~~~-~~~v~C~~C~k~FCl~HR~---H~C~  260 (412)
                      ...+|.+  |+++. ++.+.| +|+..||..||+   |+|.
T Consensus        24 kk~RC~~--C~KKl~l~~~~C-rCg~~FC~~HR~pe~H~C~   61 (74)
T d1wfpa_          24 TATRCLS--CNKKVGVTGFKC-RCGSTFCGTHRYPESHECQ   61 (74)
T ss_dssp             CCCBCSS--SCCBCTTTCEEC-TTSCEECTTTCSTTTSCCC
T ss_pred             CCCcChh--cCCccCCCceec-CCCChhhhccCCccCcCCC
Confidence            3578985  99765 456667 799999999999   9998

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.52  E-value=0.0036  Score=49.39  Aligned_cols=34  Identities=29%  Similarity=0.846  Sum_probs=27.9

Q ss_pred             cccCCCCCCCcccc--cccccccccccccCCCCc---cCCCc
Q psy16443        225 SYKCSESGCSTLDQ--VEMLCEQCKHHFCVGHRF---HACHQ  261 (412)
Q Consensus       225 ~~~Cs~~~Ck~~~~--~~v~C~~C~k~FCl~HR~---H~C~~  261 (412)
                      ..+|.  .|+++..  .++.|. |+..||..||+   |+|..
T Consensus        25 ~~RC~--~C~KKl~l~~~~~Cr-Cg~~FC~~HR~pe~H~Ctf   63 (85)
T d1wffa_          25 MKHCF--LCGKKTGLATSFECR-CGNNFCASHRYAEAHGCNY   63 (85)
T ss_dssp             CCBCS--SSCCBCSSSSCEECT-TCCEECTTTCSTGGGTCCS
T ss_pred             CCcCh--hcCCeecCCcCeecC-CCCEehhhcCCCcCcCCCc
Confidence            35787  5998764  378994 99999999999   99983

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.71  E-value=0.096  Score=32.43  Aligned_cols=13  Identities=23%  Similarity=0.922  Sum_probs=12.0

Q ss_pred             cccCccccccccc
Q psy16443        184 PFQCDLCKNIYCK  196 (412)
Q Consensus       184 PF~C~~C~k~FC~  196 (412)
                      ||+|+.|++.|..
T Consensus         2 Py~C~eCgK~F~~   14 (26)
T d1x6ea2           2 PYKCLECGKAFSQ   14 (26)
T ss_dssp             CEECSSSCCEESS
T ss_pred             CccCCCCcCeecc
Confidence            9999999999974

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.33  E-value=0.16  Score=31.73  Aligned_cols=13  Identities=38%  Similarity=1.198  Sum_probs=11.7

Q ss_pred             cccCccccccccc
Q psy16443        184 PFQCDLCKNIYCK  196 (412)
Q Consensus       184 PF~C~~C~k~FC~  196 (412)
                      ||+|+.|++.|-.
T Consensus         3 Py~C~~C~k~F~~   15 (28)
T d1a1ia2           3 PFQCRICMRNFSR   15 (28)
T ss_dssp             CEECTTTCCEESC
T ss_pred             CccCCCCcCEecc
Confidence            9999999999953

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=82.10  E-value=0.19  Score=31.47  Aligned_cols=13  Identities=23%  Similarity=1.058  Sum_probs=11.6

Q ss_pred             cccCccccccccc
Q psy16443        184 PFQCDLCKNIYCK  196 (412)
Q Consensus       184 PF~C~~C~k~FC~  196 (412)
                      ||.|+.|++.|=.
T Consensus         2 p~~C~~C~k~F~~   14 (29)
T d2adra1           2 SFVCEVCTRAFAR   14 (29)
T ss_dssp             CBCCTTTCCCBSC
T ss_pred             cCCCCCCCCCCCC
Confidence            8999999999953

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.60  E-value=0.17  Score=33.08  Aligned_cols=13  Identities=23%  Similarity=0.968  Sum_probs=11.6

Q ss_pred             ccccCcccccccc
Q psy16443        183 LPFQCDLCKNIYC  195 (412)
Q Consensus       183 LPF~C~~C~k~FC  195 (412)
                      =||+|+.|++.|-
T Consensus         7 kP~~C~~C~k~F~   19 (36)
T d2ct1a2           7 KPYECYICHARFT   19 (36)
T ss_dssp             CSEECTTTCCEES
T ss_pred             CCEeCCCCccccc
Confidence            3999999999995