Psyllid ID: psy16572


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60-----
MLGDNEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS
cccccHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccc
ccccHHHHHHHHHHHHcccccHHHHEEHHHHccccccccccccHHHHHHHHHHHHHHHcHHHHcc
MLGDNEILFGCLLLsigtfpidtakTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKdgfwalys
MLGDNEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQIsrkdgfwalys
MLGDNEILFGCLLLSIGTFPIDTAKTRLqvqgqqldqqYAKLKYRGMTDVLLQISRKDGFWALYS
*****EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALY*
***DNEILFGCLLLSIGTFPIDTAKTRLQV***************GMTDVLLQISRKDGFWALYS
MLGDNEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS
***DNEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLGDNEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query65 2.2.26 [Sep-21-2011]
O95258 325 Brain mitochondrial carri yes N/A 0.723 0.144 0.482 3e-10
Q9Z2B2 325 Brain mitochondrial carri yes N/A 0.723 0.144 0.482 5e-10
Q6GQ22 291 Kidney mitochondrial carr N/A N/A 0.707 0.158 0.571 9e-10
Q5PQM9 291 Kidney mitochondrial carr no N/A 0.707 0.158 0.551 1e-09
Q8HXE3 291 Kidney mitochondrial carr N/A N/A 0.707 0.158 0.551 1e-09
Q5SVS4 291 Kidney mitochondrial carr no N/A 0.707 0.158 0.551 1e-09
Q9CR58 291 Kidney mitochondrial carr no N/A 0.707 0.158 0.551 1e-09
Q5XGI1 291 Kidney mitochondrial carr yes N/A 0.707 0.158 0.551 3e-09
Q9GMZ1 309 Mitochondrial brown fat u no N/A 0.738 0.155 0.437 4e-05
Q9H1K4 315 Mitochondrial glutamate c no N/A 0.615 0.126 0.446 4e-05
>sp|O95258|UCP5_HUMAN Brain mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A14 PE=2 SV=1 Back     alignment and function desciption
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 10  GCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65
             ++   GTFP+D  KTRLQVQGQ +D ++ ++KYRGM   L +I +++G  ALYS
Sbjct: 50  ASIVAEFGTFPVDLTKTRLQVQGQSIDARFKEIKYRGMFHALFRICKEEGVLALYS 105




Participates in the mitochondrial proton leak measured in brain mitochondria.
Homo sapiens (taxid: 9606)
>sp|Q9Z2B2|UCP5_MOUSE Brain mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a14 PE=2 SV=2 Back     alignment and function description
>sp|Q6GQ22|KMCP1_XENLA Kidney mitochondrial carrier protein 1 OS=Xenopus laevis GN=slc25a30 PE=2 SV=1 Back     alignment and function description
>sp|Q5PQM9|KMCP1_RAT Kidney mitochondrial carrier protein 1 OS=Rattus norvegicus GN=Slc25a30 PE=2 SV=1 Back     alignment and function description
>sp|Q8HXE3|KMCP1_MACFA Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1 Back     alignment and function description
>sp|Q5SVS4|KMCP1_HUMAN Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1 Back     alignment and function description
>sp|Q9CR58|KMCP1_MOUSE Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1 Back     alignment and function description
>sp|Q5XGI1|KMCP1_XENTR Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1 Back     alignment and function description
>sp|Q9GMZ1|UCP1_CANFA Mitochondrial brown fat uncoupling protein 1 OS=Canis familiaris GN=UCP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9H1K4|GHC2_HUMAN Mitochondrial glutamate carrier 2 OS=Homo sapiens GN=SLC25A18 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query65
66509425 299 PREDICTED: kidney mitochondrial carrier 0.861 0.187 0.642 2e-13
380025677 298 PREDICTED: kidney mitochondrial carrier 0.861 0.187 0.642 2e-13
350417339 311 PREDICTED: kidney mitochondrial carrier 0.861 0.180 0.625 2e-13
383863793 311 PREDICTED: kidney mitochondrial carrier 0.861 0.180 0.642 3e-13
157130715 328 mitochondrial carrier protein [Aedes aeg 0.753 0.149 0.673 4e-13
194869314 303 GG15525 [Drosophila erecta] gi|190654212 0.753 0.161 0.673 6e-13
170052727 318 mitochondrial carrier protein [Culex qui 0.753 0.154 0.653 6e-13
194748290 303 GF25285 [Drosophila ananassae] gi|190623 0.753 0.161 0.653 9e-13
195169730 303 GL20712 [Drosophila persimilis] gi|19410 0.753 0.161 0.653 1e-12
125977514 303 GA20254 [Drosophila pseudoobscura pseudo 0.753 0.161 0.653 1e-12
>gi|66509425|ref|XP_397152.2| PREDICTED: kidney mitochondrial carrier protein 1-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/56 (64%), Positives = 45/56 (80%)

Query: 10 GCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65
            +   +GTFP+DT KTRLQ+QGQ+LDQ+YA LKY GMTD L QIS+++GF ALYS
Sbjct: 18 ASIFAELGTFPLDTTKTRLQIQGQKLDQRYAHLKYSGMTDALFQISQQEGFKALYS 73




Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380025677|ref|XP_003696595.1| PREDICTED: kidney mitochondrial carrier protein 1-like [Apis florea] Back     alignment and taxonomy information
>gi|350417339|ref|XP_003491374.1| PREDICTED: kidney mitochondrial carrier protein 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|383863793|ref|XP_003707364.1| PREDICTED: kidney mitochondrial carrier protein 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|157130715|ref|XP_001661978.1| mitochondrial carrier protein [Aedes aegypti] gi|108871820|gb|EAT36045.1| AAEL011842-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|194869314|ref|XP_001972429.1| GG15525 [Drosophila erecta] gi|190654212|gb|EDV51455.1| GG15525 [Drosophila erecta] Back     alignment and taxonomy information
>gi|170052727|ref|XP_001862353.1| mitochondrial carrier protein [Culex quinquefasciatus] gi|167873575|gb|EDS36958.1| mitochondrial carrier protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|194748290|ref|XP_001956581.1| GF25285 [Drosophila ananassae] gi|190623863|gb|EDV39387.1| GF25285 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|195169730|ref|XP_002025672.1| GL20712 [Drosophila persimilis] gi|194109165|gb|EDW31208.1| GL20712 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|125977514|ref|XP_001352790.1| GA20254 [Drosophila pseudoobscura pseudoobscura] gi|54641540|gb|EAL30290.1| GA20254 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query65
FB|FBgn0036199 303 Bmcp "Bmcp" [Drosophila melano 0.753 0.161 0.530 1.7e-08
UNIPROTKB|Q5JY88198 SLC25A14 "Brain mitochondrial 0.830 0.272 0.388 2.3e-06
UNIPROTKB|K7GNX9157 LOC100626714 "Uncharacterized 0.830 0.343 0.388 2.6e-06
UNIPROTKB|K7GPR0121 LOC100626714 "Uncharacterized 0.830 0.446 0.388 2.6e-06
UNIPROTKB|K7GS82158 LOC100626714 "Uncharacterized 0.830 0.341 0.388 2.6e-06
UNIPROTKB|B4DJN2 205 SLC25A14 "cDNA FLJ60600, highl 0.830 0.263 0.388 2.7e-06
MGI|MGI:1914804 291 Slc25a30 "solute carrier famil 0.753 0.168 0.448 3.2e-06
RGD|1359702 291 Slc25a30 "solute carrier famil 0.753 0.168 0.448 3.2e-06
UNIPROTKB|Q5PQM9 291 Slc25a30 "Kidney mitochondrial 0.753 0.168 0.448 3.2e-06
UNIPROTKB|F1NXC0 297 SLC25A30 "Uncharacterized prot 0.753 0.164 0.469 3.4e-06
FB|FBgn0036199 Bmcp "Bmcp" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 134 (52.2 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 26/49 (53%), Positives = 34/49 (69%)

Query:    17 GTFPIDTAKTRLXXXXXXXXXXYAKLKYRGMTDVLLQISRKDGFWALYS 65
             GTFPIDT KTRL          +++L+YRGMTD  ++ISR++G  ALYS
Sbjct:    23 GTFPIDTTKTRLQIQGQKIDQSFSQLRYRGMTDAFVKISREEGLRALYS 71




GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0019222 "regulation of metabolic process" evidence=IMP
GO:0007605 "sensory perception of sound" evidence=IMP
UNIPROTKB|Q5JY88 SLC25A14 "Brain mitochondrial carrier protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|K7GNX9 LOC100626714 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|K7GPR0 LOC100626714 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|K7GS82 LOC100626714 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|B4DJN2 SLC25A14 "cDNA FLJ60600, highly similar to Brain mitochondrial carrier protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1914804 Slc25a30 "solute carrier family 25, member 30" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1359702 Slc25a30 "solute carrier family 25, member 30" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5PQM9 Slc25a30 "Kidney mitochondrial carrier protein 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NXC0 SLC25A30 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5XGI1KMCP1_XENTRNo assigned EC number0.55100.70760.1580yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query65
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-09
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 47.6 bits (114), Expect = 4e-09
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 18 TFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALY 64
          T+P+D  KTRLQ             KY+G+ D   +I +++G   LY
Sbjct: 23 TYPLDVVKTRLQSSAAG-----GSRKYKGILDCFKKIYKEEGIRGLY 64


Length = 96

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 65
KOG0752|consensus320 99.66
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.65
KOG0754|consensus 294 99.64
KOG0752|consensus 320 99.64
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.64
KOG0764|consensus 299 99.61
KOG0757|consensus 319 99.6
KOG0764|consensus 299 99.6
KOG0751|consensus 694 99.6
KOG0762|consensus311 99.59
KOG0753|consensus317 99.59
KOG0750|consensus304 99.58
KOG0751|consensus694 99.58
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.58
KOG0758|consensus 297 99.57
KOG0760|consensus 302 99.54
PTZ00168259 mitochondrial carrier protein; Provisional 99.51
KOG0759|consensus286 99.49
KOG0753|consensus 317 99.49
KOG0762|consensus 311 99.48
KOG0768|consensus323 99.48
PTZ00168 259 mitochondrial carrier protein; Provisional 99.48
KOG0760|consensus302 99.47
KOG0758|consensus297 99.46
KOG0756|consensus299 99.44
KOG0765|consensus333 99.43
KOG0766|consensus297 99.4
KOG0769|consensus 308 99.39
KOG0757|consensus319 99.32
KOG0755|consensus 320 99.29
KOG0759|consensus 286 99.28
KOG0749|consensus298 99.26
KOG0754|consensus294 99.26
KOG0765|consensus 333 99.26
KOG0761|consensus 361 99.26
KOG0761|consensus361 99.26
KOG0768|consensus 323 99.2
KOG0036|consensus463 99.18
KOG0767|consensus 333 99.11
KOG0749|consensus 298 99.06
KOG0770|consensus 353 99.06
KOG0036|consensus 463 99.0
KOG0755|consensus320 98.99
KOG0766|consensus 297 98.94
KOG0770|consensus 353 98.94
KOG0763|consensus 301 98.92
KOG0763|consensus 301 98.88
KOG0769|consensus 308 98.86
KOG0767|consensus 333 98.84
KOG2954|consensus427 98.8
KOG0750|consensus 304 98.73
KOG0756|consensus 299 98.53
KOG2745|consensus 321 98.29
KOG1519|consensus297 98.27
KOG2745|consensus 321 97.52
KOG2954|consensus 427 88.97
KOG1519|consensus 297 88.39
>KOG0752|consensus Back     alignment and domain information
Probab=99.66  E-value=1.4e-16  Score=93.79  Aligned_cols=58  Identities=26%  Similarity=0.439  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572          6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS   65 (65)
Q Consensus         6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr   65 (65)
                      ..++||+++.+++||||+||.|||+....  ......+++++++|+++|+++||+.||||
T Consensus       229 ~GalAG~~aqti~yPlD~vRrrmQ~~~~~--~~~~~~~~~~~~~~~~~i~~~EG~~gLYk  286 (320)
T KOG0752|consen  229 CGALAGAVAQTITYPLDTVRRRMQLGGLK--YFGGGFRYKGVLDAFRQIVKTEGVKGLYK  286 (320)
T ss_pred             HHHHHHHHHhhhcccHHHHHHHHhccCcc--ccccccccccHHHHHHHHHHHhhhhhhhc
Confidence            34788899999999999999999998753  11234456899999999999999999997



>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query65
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-13
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-08
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-06
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-09
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-09
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-07
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score = 61.9 bits (151), Expect = 1e-13
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 18 TFPIDTAKTRLQVQG--QQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65
          TFP+DTAK RLQ+QG  Q L +  A  +YRG+   +L + R +G  +LY+
Sbjct: 19 TFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYN 68


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query65
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.69
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.66
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.63
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.6
2acm_A66 Mucin-1; auto-catalytic proteolysis, structural pr 84.58
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=99.69  E-value=6.4e-17  Score=93.02  Aligned_cols=56  Identities=21%  Similarity=0.374  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572          7 ILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS   65 (65)
Q Consensus         7 ~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr   65 (65)
                      .++||++++++++|+|+||+|+|.+....   .....|+++++|+++|+++||++||||
T Consensus       216 g~~ag~~a~~~t~P~dvvktr~q~~~~~~---~~~~~y~~~~~~~~~i~~~eG~~glyr  271 (297)
T 1okc_A          216 AQTVTAVAGLVSYPFDTVRRRMMMQSGRK---GADIMYTGTVDCWRKIAKDEGPKAFFK  271 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTTCC---GGGCSCSSHHHHHHHHHHHHCGGGGGT
T ss_pred             HHHHHHHHHHhcChHHHHHHHHhhcCCCC---CCCCCCCCHHHHHHHHHHHcCcCeEec
Confidence            46777888999999999999999875421   123479999999999999999999997



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2acm_A Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 65
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-07
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-04
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 42.4 bits (98), Expect = 4e-07
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 18 TFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFW 61
            PI+  K  LQVQ         K +Y+G+ D +++I ++ GF 
Sbjct: 24 VAPIERVKLLLQVQHASKQISAEK-QYKGIIDCVVRIPKEQGFL 66


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query65
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.68
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.6
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.68  E-value=3.8e-17  Score=91.89  Aligned_cols=56  Identities=21%  Similarity=0.374  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572          7 ILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS   65 (65)
Q Consensus         7 ~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr   65 (65)
                      ..+++.+++++++|+|+||+|+|.+....   .....|.++++++++++++||++||||
T Consensus       215 ~~~~~~~a~~~t~P~dvvktR~q~~~~~~---~~~~~y~~~~~~~~~i~~~eG~~~lyr  270 (292)
T d1okca_         215 AQTVTAVAGLVSYPFDTVRRRMMMQSGRK---GADIMYTGTVDCWRKIAKDEGPKAFFK  270 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTTCC---GGGCSCSSHHHHHHHHHHHHCGGGGGT
T ss_pred             HHHHHHHHhhccccHHHHHHHHHhcCCCC---CCCCCCCCHHHHHHHHHHhcCcCcccc
Confidence            35666788889999999999999986531   234578999999999999999999997



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure