Psyllid ID: psy16685

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFNIVKAQM
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccccccEccccHHHHHHHHHccc
Coil and Loop (DISEMBL)
MIYILRVLIsekphvcsvcskgfstssslnthrrihsgekphqcqvcgkrftassnlyyhrmthikvnddFKEIlnlepvsgsndeknlnKFNIVKAQM
Flexible Loop (DISEMBL)
MIYILRvlisekphvcsvCSKGFSTSSSLNTHRrihsgekphqcqvcGKRFTASSNLYYHRMTHIKVNDDFKEILNLepvsgsndeknlnkfnivkaqm
Low Complexity Region (SEG)
MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFNIVKAQM
Disordered region (IsUnstruct)
*IYILRVLISEKPHVCSVCSKGF******************HQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNL**********************
Disordered Region (DISOPRED)
MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFNIV*A**
Disordered Region (DISEMBL)
MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFNIVKAQM
Disordered Region (DISPRO)
MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFNIV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFNIVKAQM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	99	2.2.26 [Sep-21-2011]
O60304	480	Zinc finger protein 500 O	yes	N/A	0.555	0.114	0.542	7e-15
P0CG23	659	Zinc finger protein 853 O	no	N/A	0.585	0.088	0.559	2e-14
Q07230	614	Zinc finger and SCAN doma	no	N/A	0.656	0.105	0.538	5e-14
Q86WZ6	799	Zinc finger protein 227 O	no	N/A	0.141	0.017	0.55	6e-14
Q7Z7L9	614	Zinc finger and SCAN doma	no	N/A	0.656	0.105	0.538	7e-14
Q5RCD9	645	Zinc finger and SCAN doma	no	N/A	0.656	0.100	0.538	8e-14
A0JNB1	787	Zinc finger protein 227 O	no	N/A	0.191	0.024	0.55	8e-14
Q14590	738	Zinc finger protein 235 O	no	N/A	0.606	0.081	0.540	1e-13
Q96LW9	406	Zinc finger protein 323 O	no	N/A	0.656	0.160	0.523	1e-13
Q9UK10	706	Zinc finger protein 225 O	no	N/A	0.616	0.086	0.548	2e-13

>sp|O60304|ZN500_HUMAN Zinc finger protein 500 OS=Homo sapiens GN=ZNF500 PE=2 SV=2

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 42/59 (71%)

Query: 6   RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           R    E+P+ C VC KGFS  S+ +TH+R+H+GEKP+ C  CGKRF+ SS+L  HR TH
Sbjct: 345 RTHTGERPYKCLVCGKGFSDRSNFSTHQRVHTGEKPYPCPECGKRFSQSSSLVIHRRTH 403

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|P0CG23|ZN853_HUMAN Zinc finger protein 853 OS=Homo sapiens GN=ZNF853 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/59 (55%), Positives = 42/59 (71%)

Query: 6   RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           R+   EKP+ CS C+K FS SS+L  H+R H+GE+P+ C  CGKRF+ SSNL  HR TH
Sbjct: 533 RIHTGEKPYACSYCAKRFSESSALVQHQRTHTGERPYACGDCGKRFSVSSNLLRHRRTH 591

Homo sapiens (taxid: 9606)

>sp|Q07230|ZSCA2_MOUSE Zinc finger and SCAN domain-containing protein 2 OS=Mus musculus GN=Zscan2 PE=1 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 45/65 (69%)

Query: 1   MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
           +I   R+   EKP+ C+ C + FS SS+L THRR H+GEKP+QC  CGK F+ SSNL  H
Sbjct: 377 LIRHQRIHTGEKPYKCTECGQKFSQSSALITHRRTHTGEKPYQCGECGKNFSRSSNLATH 436

Query: 61  RMTHI 65
           R TH+
Sbjct: 437 RRTHL 441

May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.

Mus musculus (taxid: 10090)

>sp|Q86WZ6|ZN227_HUMAN Zinc finger protein 227 OS=Homo sapiens GN=ZNF227 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 41/60 (68%)

Query: 6   RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
           RV   EKP+ C VC KGFS SS L +H+R+H+GEKP++C VCGK F  SS   YH+  H 
Sbjct: 624 RVHTGEKPYKCGVCGKGFSQSSGLQSHQRVHTGEKPYKCDVCGKGFRYSSQFIYHQRGHT 683

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q7Z7L9|ZSCA2_HUMAN Zinc finger and SCAN domain-containing protein 2 OS=Homo sapiens GN=ZSCAN2 PE=2 SV=2

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 45/65 (69%)

Query: 1   MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
           +I   R+   EKP+ C+ C + FS SS+L THRR H+GEKP+QC  CGK F+ SSNL  H
Sbjct: 377 LIRHQRIHTGEKPYKCTDCGQRFSQSSALITHRRTHTGEKPYQCSECGKSFSRSSNLATH 436

Query: 61  RMTHI 65
           R TH+
Sbjct: 437 RRTHM 441

May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.

Homo sapiens (taxid: 9606)

>sp|Q5RCD9|ZSCA2_PONAB Zinc finger and SCAN domain-containing protein 2 OS=Pongo abelii GN=ZSCAN2 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 45/65 (69%)

Query: 1   MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
           +I   R+   EKP+ C+ C + FS SS+L THRR H+GEKP+QC  CGK F+ SSNL  H
Sbjct: 408 LIRHQRIHTGEKPYKCTDCGQRFSQSSALITHRRTHTGEKPYQCSECGKNFSRSSNLATH 467

Query: 61  RMTHI 65
           R TH+
Sbjct: 468 RRTHM 472

May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.

Pongo abelii (taxid: 9601)

>sp|A0JNB1|ZN227_BOVIN Zinc finger protein 227 OS=Bos taurus GN=ZNF227 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 41/60 (68%)

Query: 6   RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
           RV   EKP+ C VC KGFS SS L +H+R+H+GEKP++C VCGK F  SS   YH+  H 
Sbjct: 612 RVHTGEKPYKCGVCGKGFSQSSGLQSHQRVHTGEKPYKCDVCGKGFRYSSQFIYHQRGHT 671

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q14590|ZN235_HUMAN Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 PE=2 SV=3

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 42/61 (68%)

Query: 6   RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
           RV   EKP+ C VC KGF+  S L  H RIH+GEKP++C  CGKRF+ SSNL+ H+  H 
Sbjct: 395 RVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHT 454

Query: 66  K 66
           +
Sbjct: 455 E 455

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q96LW9|ZN323_HUMAN Zinc finger protein 323 OS=Homo sapiens GN=ZNF323 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 42/65 (64%)

Query: 1   MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
           +I   R+   EKP+ C  C K FS  SSLN HRR H+GEKP+QC+ CGK F+AS+ L  H
Sbjct: 254 LIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRSHTGEKPYQCKECGKAFSASNGLTRH 313

Query: 61  RMTHI 65
           R  H 
Sbjct: 314 RRIHT 318

May function as a transcription factor. May be involved in the development of multiple embryonic organs.

Homo sapiens (taxid: 9606)

>sp|Q9UK10|ZN225_HUMAN Zinc finger protein 225 OS=Homo sapiens GN=ZNF225 PE=2 SV=2

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 41/62 (66%)

Query: 6   RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
           R+   EKP  C  C K F+ +S L THRR+HSGEKP +C+ CGKRFT +S LY HR  H 
Sbjct: 476 RIHSGEKPFKCEECGKRFTQNSQLYTHRRVHSGEKPFKCEECGKRFTQNSQLYSHRRVHT 535

Query: 66  KV 67
            V
Sbjct: 536 GV 537

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
242024237	349	zinc finger protein c2h2, putative [Pedi	0.626	0.177	0.887	2e-25
193610439	497	PREDICTED: zinc finger protein 235-like	0.626	0.124	0.870	3e-25
312380485	428	hypothetical protein AND_07455 [Anophele	0.626	0.144	0.870	5e-25
158288337	325	AGAP009483-PA [Anopheles gambiae str. PE	0.626	0.190	0.870	9e-25
157108553	404	zinc finger protein [Aedes aegypti] gi|1	0.626	0.153	0.870	9e-25
158288339	338	AGAP009482-PA [Anopheles gambiae str. PE	0.626	0.183	0.870	1e-24
170036583	330	zinc finger protein [Culex quinquefascia	0.626	0.187	0.870	1e-24
321475720	179	hypothetical protein DAPPUDRAFT_44266 [D	0.626	0.346	0.870	1e-24
357611828	309	hypothetical protein KGM_07310 [Danaus p	0.626	0.200	0.870	1e-24
391336961	495	PREDICTED: zinc finger protein 235-like	0.626	0.125	0.854	2e-24

>gi|242024237|ref|XP_002432535.1| zinc finger protein c2h2, putative [Pediculus humanus corporis] gi|212517987|gb|EEB19797.1| zinc finger protein c2h2, putative [Pediculus humanus corporis]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/62 (88%), Positives = 57/62 (91%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC VC+KGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH
Sbjct: 202 MRTHTGEKPHVCMVCNKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 261

Query: 65  IK 66
           IK
Sbjct: 262 IK 263

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193610439|ref|XP_001952629.1| PREDICTED: zinc finger protein 235-like [Acyrthosiphon pisum]

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 57/62 (91%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC+VC+KGFSTSSSLNTHRRIHSGEKPHQC VCGKRFTASSNLYYHRMTH
Sbjct: 270 MRTHTGEKPHVCAVCNKGFSTSSSLNTHRRIHSGEKPHQCGVCGKRFTASSNLYYHRMTH 329

Query: 65  IK 66
           IK
Sbjct: 330 IK 331

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312380485|gb|EFR26464.1| hypothetical protein AND_07455 [Anopheles darlingi]

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 55/62 (88%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC VC KGFSTSSSLNTH RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH
Sbjct: 204 MRTHTGEKPHVCGVCGKGFSTSSSLNTHVRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 263

Query: 65  IK 66
           IK
Sbjct: 264 IK 265

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158288337|ref|XP_310215.4| AGAP009483-PA [Anopheles gambiae str. PEST] gi|157019202|gb|EAA05906.4| AGAP009483-PA [Anopheles gambiae str. PEST]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 55/62 (88%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC VC KGFSTSSSLNTH RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH
Sbjct: 201 MRTHTGEKPHVCGVCGKGFSTSSSLNTHVRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 260

Query: 65  IK 66
           IK
Sbjct: 261 IK 262

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157108553|ref|XP_001650281.1| zinc finger protein [Aedes aegypti] gi|108884041|gb|EAT48266.1| AAEL000715-PA [Aedes aegypti]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 55/62 (88%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC VC KGFSTSSSLNTH RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH
Sbjct: 199 MRTHTGEKPHVCGVCGKGFSTSSSLNTHVRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 258

Query: 65  IK 66
           IK
Sbjct: 259 IK 260

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158288339|ref|XP_310216.4| AGAP009482-PA [Anopheles gambiae str. PEST] gi|157019203|gb|EAA05918.4| AGAP009482-PA [Anopheles gambiae str. PEST]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 55/62 (88%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC VC KGFSTSSSLNTH RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH
Sbjct: 209 MRTHTGEKPHVCGVCGKGFSTSSSLNTHVRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 268

Query: 65  IK 66
           IK
Sbjct: 269 IK 270

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170036583|ref|XP_001846143.1| zinc finger protein [Culex quinquefasciatus] gi|167879211|gb|EDS42594.1| zinc finger protein [Culex quinquefasciatus]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 55/62 (88%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC VC KGFSTSSSLNTH RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH
Sbjct: 202 MRTHTGEKPHVCGVCGKGFSTSSSLNTHVRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 261

Query: 65  IK 66
           IK
Sbjct: 262 IK 263

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321475720|gb|EFX86682.1| hypothetical protein DAPPUDRAFT_44266 [Daphnia pulex]

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 55/62 (88%)

Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R    EKPHVC VC KGFSTSSSLNTHRRIHSGEKPHQC VCGKRFTASSNLYYHRMTH
Sbjct: 17 MRTHTGEKPHVCDVCGKGFSTSSSLNTHRRIHSGEKPHQCPVCGKRFTASSNLYYHRMTH 76

Query: 65 IK 66
          IK
Sbjct: 77 IK 78

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357611828|gb|EHJ67666.1| hypothetical protein KGM_07310 [Danaus plexippus]

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 56/62 (90%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC VC+KGFSTSSSLNTHRRIHSGEKPHQCQ CGKRFTASSNLYYHRMTH
Sbjct: 181 MRTHTGEKPHVCMVCNKGFSTSSSLNTHRRIHSGEKPHQCQHCGKRFTASSNLYYHRMTH 240

Query: 65  IK 66
           IK
Sbjct: 241 IK 242

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391336961|ref|XP_003742843.1| PREDICTED: zinc finger protein 235-like [Metaseiulus occidentalis]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 54/62 (87%)

Query: 5   LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +R    EKPHVC VC KGFSTSSSLNTHRRIHSGEKPHQC VCGKRFTASSNLYYHRMTH
Sbjct: 245 MRTHTGEKPHVCDVCGKGFSTSSSLNTHRRIHSGEKPHQCNVCGKRFTASSNLYYHRMTH 304

Query: 65  IK 66
            K
Sbjct: 305 SK 306

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
ZFIN|ZDB-GENE-110914-47	293	si:ch211-271g18.2 "si:ch211-27	0.606	0.204	0.55	4.3e-15
ZFIN|ZDB-GENE-110914-52	293	si:dkey-238o14.9 "si:dkey-238o	0.606	0.204	0.55	4.3e-15
UNIPROTKB|I3LN81	272	ZNF239 "Uncharacterized protei	0.626	0.227	0.548	5.4e-15
UNIPROTKB|F1Q138	279	ZNF500 "Uncharacterized protei	0.595	0.211	0.542	5.4e-15
ZFIN|ZDB-GENE-030131-5765	231	zgc:66483 "zgc:66483" [Danio r	0.545	0.233	0.611	8.8e-15
UNIPROTKB|Q9UJN7	358	ZNF391 "Zinc finger protein 39	0.595	0.164	0.593	9.7e-15
MGI|MGI:1306812	201	Zfp239 "zinc finger protein 23	0.626	0.308	0.532	1.4e-14
ZFIN|ZDB-GENE-110914-31	348	si:dkey-232o15.1 "si:dkey-232o	0.606	0.172	0.55	1.5e-14
UNIPROTKB|F1N9T2	303	LOC100858709 "Uncharacterized	0.636	0.207	0.555	1.7e-14
RGD|1563095	175	Zfp853 "zinc finger protein 85	0.595	0.337	0.559	1.8e-14

ZFIN|ZDB-GENE-110914-47 si:ch211-271g18.2 "si:ch211-271g18.2" [Danio rerio (taxid:7955)]

 Score = 191 (72.3 bits), Expect = 4.3e-15, P = 4.3e-15
 Identities = 33/60 (55%), Positives = 42/60 (70%)

Query:     5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             +R+   EKP++C+ C K FS SS+LN H RIH+GEKP  C  CGK F+ SS+L YH M H
Sbjct:    85 MRIHTGEKPYICTQCGKSFSISSNLNQHMRIHTGEKPFTCTQCGKSFSQSSHLNYHMMIH 144

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110914-52 si:dkey-238o14.9 "si:dkey-238o14.9" [Danio rerio (taxid:7955)]

 Score = 191 (72.3 bits), Expect = 4.3e-15, P = 4.3e-15
 Identities = 33/60 (55%), Positives = 42/60 (70%)

Query:     5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             +R+   EKP++C+ C K FS SS+LN H RIH+GEKP  C  CGK F+ SS+L YH M H
Sbjct:    85 MRIHTGEKPYICTQCGKSFSISSNLNQHMRIHTGEKPFTCTQCGKSFSQSSHLNYHMMIH 144

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|I3LN81 ZNF239 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 34/62 (54%), Positives = 43/62 (69%)

Query:     5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             LRV   EKP+ C  C KGFS SS L  H+R+H+GEKP++C  CGK F+ SSNL+ H+  H
Sbjct:   208 LRVHTGEKPYHCGKCGKGFSQSSKLLIHQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVH 267

Query:    65 IK 66
              K
Sbjct:   268 RK 269

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1Q138 ZNF500 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 32/59 (54%), Positives = 42/59 (71%)

Query:     6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             R    E+P+ C VC KGFS  S+ +TH+R+H+GEKP+ C  CGKRF+ SS+L  HR TH
Sbjct:   120 RTHTGERPYKCQVCGKGFSDRSNFSTHQRVHTGEKPYACAECGKRFSQSSSLVIHRRTH 178

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-030131-5765 zgc:66483 "zgc:66483" [Danio rerio (taxid:7955)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 33/54 (61%), Positives = 39/54 (72%)

Query:    11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             EKPHVCS C K F+TSS+  TH+RIH+GEKP+QC  CGK F  SS L  H+  H
Sbjct:   177 EKPHVCSDCGKSFATSSNFKTHQRIHTGEKPYQCSDCGKSFRQSSRLKTHQRIH 230

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9UJN7 ZNF391 "Zinc finger protein 391" [Homo sapiens (taxid:9606)]

 Score = 192 (72.6 bits), Expect = 9.7e-15, P = 9.7e-15
 Identities = 35/59 (59%), Positives = 42/59 (71%)

Query:     6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             R    E P+ CS C K FS SSSL  H+RIHSGEKPH+C+VCGK F+ SS+L  H+ TH
Sbjct:   269 RTHTGENPYECSECGKVFSRSSSLTEHQRIHSGEKPHECRVCGKGFSRSSSLIIHQRTH 327

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

MGI|MGI:1306812 Zfp239 "zinc finger protein 239" [Mus musculus (taxid:10090)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             LRV   EKP+ C  C +GFS SS L  H+R+H+GEKP++C  CGK F+ SSNL+ H+  H
Sbjct:   137 LRVHTGEKPYHCGKCGQGFSQSSKLLIHQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVH 196

Query:    65 IK 66
              K
Sbjct:   197 RK 198

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-110914-31 si:dkey-232o15.1 "si:dkey-232o15.1" [Danio rerio (taxid:7955)]

 Score = 190 (71.9 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 33/60 (55%), Positives = 40/60 (66%)

Query:     5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             +++   EKP +C++C K FS SSSLN H RIH+GEKP  C  CGK F  SSNLY H   H
Sbjct:    57 MKIHTGEKPFICTLCGKSFSQSSSLNLHMRIHTGEKPFTCTQCGKSFNQSSNLYLHMRIH 116

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1N9T2 LOC100858709 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 187 (70.9 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 35/63 (55%), Positives = 42/63 (66%)

Query:     2 IYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHR 61
             I++L V    +PH CSVC K FS SSSLN H R+HSGE+P++C  C K FTASS L  H 
Sbjct:   125 IHVLHVHEKHRPHKCSVCGKSFSQSSSLNKHMRVHSGERPYKCVYCNKAFTASSILRTHI 184

Query:    62 MTH 64
               H
Sbjct:   185 RQH 187

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1563095 Zfp853 "zinc finger protein 853" [Rattus norvegicus (taxid:10116)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 33/59 (55%), Positives = 42/59 (71%)

Query:     6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             R+   EKP+ C+ CSK FS SS+L  H+R H+GE+P+ C  CGKRF+ SSNL  HR TH
Sbjct:    66 RIHTGEKPYACTYCSKRFSESSALVQHQRTHTGERPYACGDCGKRFSVSSNLLRHRRTH 124

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O60304	ZN500_HUMAN	No assigned EC number	0.5423	0.5555	0.1145	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	99
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	7e-06
PHA00733	128	PHA00733, PHA00733, hypothetical protein	7e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 38.9 bits (91), Expect = 7e-06
 Identities = 14/25 (56%), Positives = 19/25 (76%)

Query: 28 SLNTHRRIHSGEKPHQCQVCGKRFT 52
          +L  H R H+GEKP++C VCGK F+
Sbjct: 1  NLRRHMRTHTGEKPYKCPVCGKSFS 25

Length = 26

>gnl|CDD|177301 PHA00733, PHA00733, hypothetical protein

 Score = 36.0 bits (83), Expect = 7e-04
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 3   YILRVLISE--KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
           Y+ ++L S+   P+VC +C   FS+S SL  H  I   E    C VCGK F  + +   H
Sbjct: 61  YLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQH--IRYTEHSKVCPVCGKEFRNTDSTLDH 118

Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
KOG2462|consensus	279		99.91
KOG2462|consensus	279		99.8
KOG3576|consensus	267		99.59
KOG3623|consensus	1007		99.59
KOG3576|consensus	267		99.54
KOG3623|consensus	1007		99.47
PHA02768	55	hypothetical protein; Provisional	99.23
KOG1074|consensus	958		99.22
KOG3608|consensus	467		99.18
PHA00733	128	hypothetical protein	99.15
KOG1074|consensus	958		99.12
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.05
PHA00733	128	hypothetical protein	98.98
KOG3608|consensus	467		98.92
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.89
PHA02768	55	hypothetical protein; Provisional	98.87
PLN03086	567	PRLI-interacting factor K; Provisional	98.81
PHA00616	44	hypothetical protein	98.7
PHA00616	44	hypothetical protein	98.7
PHA00732	79	hypothetical protein	98.63
PLN03086	567	PRLI-interacting factor K; Provisional	98.55
KOG3993|consensus	500		98.33
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.25
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.1
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.08
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.95
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.93
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.89
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.86
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.8
PHA00732	79	hypothetical protein	97.73
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.71
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.59
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.55
PRK04860	160	hypothetical protein; Provisional	97.45
smart00355	26	ZnF_C2H2 zinc finger.	97.41
smart00355	26	ZnF_C2H2 zinc finger.	97.22
KOG3993|consensus	500		96.96
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.92
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.74
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.68
PRK04860	160	hypothetical protein; Provisional	96.59
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.4
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.86
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	95.82
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.8
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	95.21
COG5048	467	FOG: Zn-finger [General function prediction only]	95.03
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.0
KOG2893|consensus	341		93.82
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	93.21
KOG1146|consensus	1406		93.04
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	92.9
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	92.52
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	92.07
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	91.6
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	91.22
COG1592	166	Rubrerythrin [Energy production and conversion]	90.64
KOG2186|consensus	276		90.59
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	90.55
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	89.99
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	89.91
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	89.58
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	89.53
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	89.04
COG4049	65	Uncharacterized protein containing archaeal-type C	89.0
PHA00626	59	hypothetical protein	88.99
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	88.99
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	88.32
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	87.73
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	87.58
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	87.5
COG5048	467	FOG: Zn-finger [General function prediction only]	87.16
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	87.09
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	86.75
PRK06266	178	transcription initiation factor E subunit alpha; V	86.53
KOG2893|consensus	341		86.2
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	85.73
smart00531	147	TFIIE Transcription initiation factor IIE.	85.38
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	84.45
PF14353	128	CpXC: CpXC protein	83.92
PRK09678	72	DNA-binding transcriptional regulator; Provisional	81.93
KOG4173|consensus	253		80.35

>KOG2462|consensus

Probab=99.91  E-value=8.4e-26  Score=134.73  Aligned_cols=89  Identities=33%  Similarity=0.456  Sum_probs=83.5

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhcccccc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPV   80 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~   80 (99)
                      |.+|+|+|+  -|+.|.+||+.|..+..|+.|+++|+|+|||.|+.|+++|...++|+.|+++|.++|+|.|..|+..+.
T Consensus       177 LkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFs  254 (279)
T KOG2462|consen  177 LKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFA  254 (279)
T ss_pred             HhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHH
Confidence            578999988  488999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCcchhhhhh
Q psy16685         81 SGSNDEKNLNK   91 (99)
Q Consensus        81 ~~~~~~~~~~~   91 (99)
                      .-+.+++|...
T Consensus       255 l~SyLnKH~ES  265 (279)
T KOG2462|consen  255 LKSYLNKHSES  265 (279)
T ss_pred             HHHHHHHhhhh
Confidence            88888888754

>KOG2462|consensus

Probab=99.80  E-value=1.3e-20  Score=112.66  Aligned_cols=95  Identities=24%  Similarity=0.291  Sum_probs=85.9

Q ss_pred             CeehhhhhcC---CCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccc
Q psy16685          1 MIYILRVLIS---EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNL   77 (99)
Q Consensus         1 l~~h~~~h~~---~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~   77 (99)
                      |.+|+.+|-.   .+.+.|..|++.|.+-..|+.|+++|+  -+.+|..||+.|.++.-|+.|+|+|+|||||.|..|+.
T Consensus       146 LsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~k  223 (279)
T KOG2462|consen  146 LSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGK  223 (279)
T ss_pred             cchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccc
Confidence            5677777653   466889999999999999999999987  57999999999999999999999999999999999999


Q ss_pred             cccCCCcchhhhhhhhhhhc
Q psy16685         78 EPVSGSNDEKNLNKFNIVKA   97 (99)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~   97 (99)
                      .+.+.+++..||.+...++.
T Consensus       224 AFADRSNLRAHmQTHS~~K~  243 (279)
T KOG2462|consen  224 AFADRSNLRAHMQTHSDVKK  243 (279)
T ss_pred             hhcchHHHHHHHHhhcCCcc
Confidence            99999999999999887664

>KOG3576|consensus

Probab=99.59  E-value=1.2e-16  Score=92.53  Aligned_cols=87  Identities=30%  Similarity=0.436  Sum_probs=67.6

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhh
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLN   90 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (99)
                      ...+.|.+|++.|...-.|.+|++.|...+.+.|..||+.|...-.|++|+++|+|.+||.|..|...+...-.++.|+.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            34577888888887777777888888777778888888888877778888888888888888888888877777788877


Q ss_pred             hhhhhhc
Q psy16685         91 KFNIVKA   97 (99)
Q Consensus        91 ~~~~~~~   97 (99)
                      +++.+..
T Consensus       195 kvhgv~~  201 (267)
T KOG3576|consen  195 KVHGVQH  201 (267)
T ss_pred             HHcCchH
Confidence            7776543

>KOG3623|consensus

Probab=99.59  E-value=3.3e-16  Score=104.12  Aligned_cols=81  Identities=26%  Similarity=0.404  Sum_probs=71.3

Q ss_pred             CCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhh
Q psy16685         10 SEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNL   89 (99)
Q Consensus        10 ~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   89 (99)
                      ...+|.|++|.++|...+.|.+|..-|+|.+||+|.+|.++|..+-.|..|+|+|.|||||.|.+|+..+.-...-..||
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            34589999999999999999999999999999999999999999999999999999999999999998876655555555


Q ss_pred             h
Q psy16685         90 N   90 (99)
Q Consensus        90 ~   90 (99)
                      +
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            4

>KOG3576|consensus

Probab=99.54  E-value=5.8e-16  Score=89.72  Aligned_cols=92  Identities=25%  Similarity=0.378  Sum_probs=79.1

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhcc-----------CCCc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI-----------KVND   69 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------~~~~   69 (99)
                      |.+|+..|...+.|.|..||+.|...-.|++|+++|+|.+||+|..|+++|.....|..|.+.-+           .++-
T Consensus       133 lnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl  212 (267)
T KOG3576|consen  133 LNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKL  212 (267)
T ss_pred             HHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhhe
Confidence            57899999999999999999999999999999999999999999999999999999999987433           3677


Q ss_pred             chhhhccccccCCCcchhhhhhh
Q psy16685         70 DFKEILNLEPVSGSNDEKNLNKF   92 (99)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~   92 (99)
                      |.|+-|+...........|+...
T Consensus       213 ~vcedcg~t~~~~e~~~~h~~~~  235 (267)
T KOG3576|consen  213 YVCEDCGYTSERPEVYYLHLKLH  235 (267)
T ss_pred             eeecccCCCCCChhHHHHHHHhc
Confidence            88899988776666555555433

>KOG3623|consensus

Probab=99.47  E-value=1e-14  Score=97.20  Aligned_cols=62  Identities=35%  Similarity=0.643  Sum_probs=59.6

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHH
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   62 (99)
                      |.||.=-|+|.+||.|.+|.+.|..+..|..|.+.|.|++||+|..|++.|.....+..||.
T Consensus       910 LaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  910 LARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             HHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            56888889999999999999999999999999999999999999999999999999999988

>PHA02768 hypothetical protein; Provisional

Probab=99.23  E-value=5.5e-12  Score=59.08  Aligned_cols=44  Identities=18%  Similarity=0.324  Sum_probs=38.3

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHH
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLY   58 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~   58 (99)
                      -|.|+.||+.|.....|..|+++|+  ++++|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4789999999999999999999988  6889999999998877664

>KOG1074|consensus

Probab=99.22  E-value=1.2e-12  Score=88.38  Aligned_cols=65  Identities=28%  Similarity=0.641  Sum_probs=51.2

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCC----ceecc---cccccccCcchHHHHHHhcc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEK----PHQCQ---VCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~----~~~C~---~C~~~f~~~~~l~~H~~~h~   65 (99)
                      |+.|.|+|+|++||+|.+||+.|.++.+|+.|+.+|....    .+.|+   +|.+.|...-.|..|.++|.
T Consensus       621 LqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~  692 (958)
T KOG1074|consen  621 LQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHL  692 (958)
T ss_pred             hhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEeec
Confidence            5678888888888888888888888888888888776543    35677   78888888888888888876

>KOG3608|consensus

Probab=99.18  E-value=5.6e-12  Score=78.60  Aligned_cols=93  Identities=22%  Similarity=0.256  Sum_probs=73.8

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCC--CCc--------------------------eeccccccccc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSG--EKP--------------------------HQCQVCGKRFT   52 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~--~~~--------------------------~~C~~C~~~f~   52 (99)
                      |.+|.|.|++++...|+.||..|.+++.|..|.+..+.  ..+                          |+|+.|+.+..
T Consensus       195 LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~  274 (467)
T KOG3608|consen  195 LREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCS  274 (467)
T ss_pred             HHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCC
Confidence            56899999999999999999999999888888765433  123                          56777777777


Q ss_pred             CcchHHHHHHh-ccCCCcchhhhccccccCCCcchhhhhhhh
Q psy16685         53 ASSNLYYHRMT-HIKVNDDFKEILNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        53 ~~~~l~~H~~~-h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (99)
                      ..+.|..|++. |...+|+.|.-|.......+++.+|.+..+
T Consensus       275 ~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  275 SASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             ChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            77778888774 678899999999988888888888887554

>PHA00733 hypothetical protein

Probab=99.15  E-value=4.3e-11  Score=66.04  Aligned_cols=81  Identities=15%  Similarity=0.128  Sum_probs=49.7

Q ss_pred             CCCeecccCcCcCCChHHHHHH--hh---hcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcc
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTH--RR---IHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSND   85 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h--~~---~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~   85 (99)
                      .+++.|.+|...|..+..+..+  +.   ...+.+||.|+.|++.|.....|..|++.+  +.++.|..|+..+.....+
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            3456677776666665544433  11   122356777777777777777777777655  3456777777777666666


Q ss_pred             hhhhhhhh
Q psy16685         86 EKNLNKFN   93 (99)
Q Consensus        86 ~~~~~~~~   93 (99)
                      ..|+.+.+
T Consensus       116 ~~H~~~~h  123 (128)
T PHA00733        116 LDHVCKKH  123 (128)
T ss_pred             HHHHHHhc
Confidence            66665544

>KOG1074|consensus

Probab=99.12  E-value=2.5e-11  Score=82.27  Aligned_cols=61  Identities=43%  Similarity=0.762  Sum_probs=57.6

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      ...|..|++.|.....|+.|+++|++.+||.|..|++.|....+|+.||.+|+|..+..-.
T Consensus       879 ~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  879 AHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRR  939 (958)
T ss_pred             hhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccC
Confidence            4679999999999999999999999999999999999999999999999999998887655

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.05  E-value=2.6e-11  Score=49.07  Aligned_cols=24  Identities=38%  Similarity=0.664  Sum_probs=16.6

Q ss_pred             CeehhhhhcCCCCeecccCcCcCC
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFS   24 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~   24 (99)
                      |.+|+++|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            456777777777777777776664

...

>PHA00733 hypothetical protein

Probab=98.98  E-value=8.7e-11  Score=64.81  Aligned_cols=61  Identities=33%  Similarity=0.567  Sum_probs=51.5

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccC
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      +|+.+ .+.+||.|+.|++.|.....|..|++.+  ..++.|..|++.|.....|..|+...++
T Consensus        64 ~~~~~-~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         64 KLLTS-KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             hhccc-CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            34333 4588999999999999999999999876  3579999999999999999999886553

>KOG3608|consensus

Probab=98.92  E-value=6.1e-10  Score=69.72  Aligned_cols=94  Identities=19%  Similarity=0.191  Sum_probs=71.1

Q ss_pred             Ceehhhh-hcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc--ccccccCcchHHHHHHhcc-C--CCcchhhh
Q psy16685          1 MIYILRV-LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTHI-K--VNDDFKEI   74 (99)
Q Consensus         1 l~~h~~~-h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~--~~~~~~~~   74 (99)
                      |.+|++. |...+|++|+.|...+...+.|..|..+|. ...|.|..  |...|.....+.+|++-++ |  +-+|.|..
T Consensus       279 L~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~  357 (467)
T KOG3608|consen  279 LTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHC  357 (467)
T ss_pred             HHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeec
Confidence            3456665 667788888888888888888888877776 45678865  8888888888888877543 3  46788888


Q ss_pred             ccccccCCCcchhhhhhhhhh
Q psy16685         75 LNLEPVSGSNDEKNLNKFNIV   95 (99)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~   95 (99)
                      |...+.++.++..|+.+.+..
T Consensus       358 Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  358 CDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             chhhhccchhHHHHHHHhhcc
Confidence            888888888888888877643

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.89  E-value=1.5e-09  Score=43.83  Aligned_cols=26  Identities=50%  Similarity=1.034  Sum_probs=22.1

Q ss_pred             HHHHHhhhcCCCCceecccccccccC
Q psy16685         28 SLNTHRRIHSGEKPHQCQVCGKRFTA   53 (99)
Q Consensus        28 ~l~~h~~~~~~~~~~~C~~C~~~f~~   53 (99)
                      +|..|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            46789999999999999999988853

...

>PHA02768 hypothetical protein; Provisional

Probab=98.87  E-value=1.3e-09  Score=51.08  Aligned_cols=42  Identities=12%  Similarity=0.216  Sum_probs=36.8

Q ss_pred             ceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCc
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSN   84 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~   84 (99)
                      .|+|+.||+.|...++|..|+++|+  +++.|..|+..+...+.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~   46 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGE   46 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccce
Confidence            4899999999999999999999999  68899999987765544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.81  E-value=4.7e-09  Score=69.77  Aligned_cols=63  Identities=14%  Similarity=0.249  Sum_probs=29.7

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccC----------cchHHHHHHhccCCCcchhhhccc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTA----------SSNLYYHRMTHIKVNDDFKEILNL   77 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~----------~~~l~~H~~~h~~~~~~~~~~~~~   77 (99)
                      .|+.|+ ||..+ ....|..|+.++...+++.|..|+..|..          ...|..|.... +.++..|..|+.
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk  549 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGR  549 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCC
Confidence            345555 55332 33445555555555555555555554421          12445554442 455555555543

>PHA00616 hypothetical protein

Probab=98.70  E-value=5.4e-09  Score=46.84  Aligned_cols=33  Identities=12%  Similarity=0.108  Sum_probs=20.9

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      ||.|..||+.|.....+..|++.+++.+++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            456666666666666666666666666666554

>PHA00616 hypothetical protein

Probab=98.70  E-value=4.9e-09  Score=46.99  Aligned_cols=34  Identities=26%  Similarity=0.305  Sum_probs=31.3

Q ss_pred             ceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      ||+|+.||+.|...+.+..|++.|++++++.+..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999988653

>PHA00732 hypothetical protein

Probab=98.63  E-value=3.6e-08  Score=50.04  Aligned_cols=46  Identities=28%  Similarity=0.535  Sum_probs=38.0

Q ss_pred             CeecccCcCcCCChHHHHHHhhh-cCCCCceecccccccccCcchHHHHHHhc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRI-HSGEKPHQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      ||.|..|++.|.....|..|++. |.   ++.|+.|++.|.   .+..|....
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            68899999999999999999884 54   358999999997   467776543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.55  E-value=1.3e-07  Score=63.15  Aligned_cols=68  Identities=15%  Similarity=0.310  Sum_probs=57.3

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhcccccc
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPV   80 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~   80 (99)
                      ...++.+.|..|+..|. ...+..|...++  +++.|+ |+..+ ....|..|+.+|...++..|..|+....
T Consensus       448 ~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~  515 (567)
T PLN03086        448 EEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQ  515 (567)
T ss_pred             cccccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccc
Confidence            34456678999999996 577899999874  789999 99765 6689999999999999999999998764

>KOG3993|consensus

Probab=98.33  E-value=2.7e-07  Score=59.26  Aligned_cols=53  Identities=36%  Similarity=0.679  Sum_probs=46.5

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCC--------C-------------------------CceecccccccccCcchHHH
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSG--------E-------------------------KPHQCQVCGKRFTASSNLYY   59 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~--------~-------------------------~~~~C~~C~~~f~~~~~l~~   59 (99)
                      -|.|++|+++|.-..+|..|.++|.-        .                         ..|.|..|++.|.+...|+.
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            58999999999999999999999832        1                         13889999999999999999


Q ss_pred             HHHhcc
Q psy16685         60 HRMTHI   65 (99)
Q Consensus        60 H~~~h~   65 (99)
                      |+.+|.
T Consensus       375 Hqlthq  380 (500)
T KOG3993|consen  375 HQLTHQ  380 (500)
T ss_pred             hHHhhh
Confidence            988876

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.25  E-value=5.7e-07  Score=34.98  Aligned_cols=22  Identities=41%  Similarity=0.803  Sum_probs=13.2

Q ss_pred             eecccccccccCcchHHHHHHh
Q psy16685         42 HQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        42 ~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.10  E-value=8.8e-06  Score=38.37  Aligned_cols=50  Identities=32%  Similarity=0.489  Sum_probs=38.0

Q ss_pred             CeecccCcCcCCChHHHHHHhhh-cCC-CCceecccccccccCcchHHHHHHhcc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRI-HSG-EKPHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~-~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      .|.|+.|++ ..+...|..|... |.. .+.+.|+.|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            478999999 5557789999665 444 35789999998644  48999988754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.08  E-value=2.1e-06  Score=33.28  Aligned_cols=23  Identities=43%  Similarity=0.836  Sum_probs=20.9

Q ss_pred             eecccCcCcCCChHHHHHHhhhc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIH   36 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~   36 (99)
                      |.|+.|++.|..+..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999998764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.95  E-value=5.8e-06  Score=32.09  Aligned_cols=23  Identities=48%  Similarity=0.881  Sum_probs=12.1

Q ss_pred             eecccccccccCcchHHHHHHhc
Q psy16685         42 HQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        42 ~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      |.|+.|+..|.+...|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45556666666666666665543

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.93  E-value=4.6e-06  Score=33.61  Aligned_cols=24  Identities=42%  Similarity=0.891  Sum_probs=14.1

Q ss_pred             ceecccccccccCcchHHHHHHhc
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      ||.|..|+..|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            355666666666666666665544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.89  E-value=1.1e-05  Score=37.09  Aligned_cols=34  Identities=26%  Similarity=0.434  Sum_probs=23.4

Q ss_pred             CCCCceecccccccccCcchHHHHHHhccCCCcc
Q psy16685         37 SGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      .++.|-.|+.|+..+.+..+|++|+++.++.+|.
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            3467889999999999999999999988887764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.86  E-value=6.3e-06  Score=51.51  Aligned_cols=52  Identities=37%  Similarity=0.738  Sum_probs=37.9

Q ss_pred             CCCeeccc--CcCcCCChHHHHHHhhhcC-------------------CCCceecccccccccCcchHHHHHH
Q psy16685         11 EKPHVCSV--CSKGFSTSSSLNTHRRIHS-------------------GEKPHQCQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus        11 ~~~~~C~~--c~~~~~~~~~l~~h~~~~~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~   62 (99)
                      ++||.|++  |.+.++....|+-|+.--+                   ..+||.|+.|++.+..-..|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            48888866  8888888877777754211                   1368888888888888888877754

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.80  E-value=1.4e-05  Score=32.11  Aligned_cols=25  Identities=44%  Similarity=0.846  Sum_probs=22.9

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998764

>PHA00732 hypothetical protein

Probab=97.73  E-value=2e-05  Score=40.00  Aligned_cols=37  Identities=19%  Similarity=0.182  Sum_probs=31.6

Q ss_pred             ceecccccccccCcchHHHHHHh-ccCCCcchhhhcccccc
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMT-HIKVNDDFKEILNLEPV   80 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~~~~~~~~   80 (99)
                      ||.|..|++.|.+...|..|++. |.+   +.|..|+..+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC
Confidence            68899999999999999999985 553   57888888776

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.71  E-value=3.5e-05  Score=29.76  Aligned_cols=23  Identities=39%  Similarity=0.846  Sum_probs=19.2

Q ss_pred             eecccCcCcCCChHHHHHHhhhc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIH   36 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~   36 (99)
                      |.|+.|+..|.+...+..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999998875

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.59  E-value=4.8e-05  Score=39.82  Aligned_cols=51  Identities=25%  Similarity=0.551  Sum_probs=21.3

Q ss_pred             ecccCcCcCCChHHHHHHhhhcCC-----------------------CCceecccccccccCcchHHHHHHhcc
Q psy16685         15 VCSVCSKGFSTSSSLNTHRRIHSG-----------------------EKPHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        15 ~C~~c~~~~~~~~~l~~h~~~~~~-----------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      +|..|+..|.....+..|+....+                       ...+.|..|+..|.+...|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            367777777777777777654322                       124889999999999999999999643

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.55  E-value=8.7e-05  Score=34.18  Aligned_cols=34  Identities=32%  Similarity=0.555  Sum_probs=24.1

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCCCCc
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP   41 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~   41 (99)
                      +..+.|..|++|+..+.+..+|.+|+...++.+|
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3456799999999999999999999988777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=97.45  E-value=0.0001  Score=42.31  Aligned_cols=35  Identities=11%  Similarity=0.045  Sum_probs=22.5

Q ss_pred             ceecccccccccCcchHHHHHHhccCCCcchhhhccccc
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEP   79 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~   79 (99)
                      +|.|. |+.   ....+.+|.+++.+++++.|..|+...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCcee
Confidence            56665 665   455566777777777777777666543

>smart00355 ZnF_C2H2 zinc finger

Probab=97.41  E-value=0.0001  Score=28.79  Aligned_cols=21  Identities=43%  Similarity=0.710  Sum_probs=10.6

Q ss_pred             ecccccccccCcchHHHHHHh
Q psy16685         43 QCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        43 ~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      .|..|++.|.....|..|++.
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHH
Confidence            344555555555555555443

>smart00355 ZnF_C2H2 zinc finger

Probab=97.22  E-value=0.00034  Score=27.20  Aligned_cols=24  Identities=38%  Similarity=0.685  Sum_probs=21.1

Q ss_pred             eecccCcCcCCChHHHHHHhhhcC
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      |.|..|++.|.....+..|+..|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999988654

>KOG3993|consensus

Probab=96.96  E-value=0.00012  Score=47.45  Aligned_cols=53  Identities=26%  Similarity=0.495  Sum_probs=42.9

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhcc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      -|.|..|-..|...-.|.+|.=.-.-..-|+|+.|++.|.-..+|..|+|.|.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccC
Confidence            36799999889888888887433322345999999999999999999999874

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.92  E-value=0.00056  Score=26.56  Aligned_cols=23  Identities=30%  Similarity=0.431  Sum_probs=13.4

Q ss_pred             eecccccccccCcchHHHHHHhcc
Q psy16685         42 HQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        42 ~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      |+|+.|+.... +..|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            46677776665 666777766543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.74  E-value=0.00095  Score=26.07  Aligned_cols=20  Identities=45%  Similarity=0.946  Sum_probs=9.6

Q ss_pred             ecccCcCcCCChHHHHHHhh
Q psy16685         15 VCSVCSKGFSTSSSLNTHRR   34 (99)
Q Consensus        15 ~C~~c~~~~~~~~~l~~h~~   34 (99)
                      .|..|+..|.+...+..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            34455555555544444443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.68  E-value=0.00081  Score=26.27  Aligned_cols=22  Identities=27%  Similarity=0.671  Sum_probs=19.9

Q ss_pred             eecccccccccCcchHHHHHHh
Q psy16685         42 HQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        42 ~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      |.|..|+..|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            6799999999999999999874

>PRK04860 hypothetical protein; Provisional

Probab=96.59  E-value=0.0016  Score=37.49  Aligned_cols=39  Identities=26%  Similarity=0.640  Sum_probs=33.0

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTAS   54 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   54 (99)
                      -+|.|. |+.   ....+..|.+++++.++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            369998 987   566778999999999999999999887654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.40  E-value=0.0018  Score=25.91  Aligned_cols=22  Identities=32%  Similarity=0.668  Sum_probs=14.5

Q ss_pred             eecccCcCcCCChHHHHHHhhh
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRI   35 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~   35 (99)
                      |.|..|++.|.+...+..|+.+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4577777777777766666543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.86  E-value=0.0064  Score=38.57  Aligned_cols=48  Identities=21%  Similarity=0.292  Sum_probs=37.4

Q ss_pred             CCceecc--cccccccCcchHHHHHHhcc-------------------CCCcchhhhccccccCCCcch
Q psy16685         39 EKPHQCQ--VCGKRFTASSNLYYHRMTHI-------------------KVNDDFKEILNLEPVSGSNDE   86 (99)
Q Consensus        39 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~-------------------~~~~~~~~~~~~~~~~~~~~~   86 (99)
                      ++||+|+  .|.+.+.....|+.|+.-.+                   ..|||.|++|+........+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLK  415 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLK  415 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccce
Confidence            5899996  59999999999999987422                   359999999987765544443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=95.82  E-value=0.0078  Score=28.20  Aligned_cols=47  Identities=26%  Similarity=0.282  Sum_probs=31.9

Q ss_pred             ceecccccccccCcchHHHHHHh-ccC-CCcchhhhccccccCCCcchhhhh
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMT-HIK-VNDDFKEILNLEPVSGSNDEKNLN   90 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~~~~~~~~~~~~~~~~~~~~   90 (99)
                      .|.|+.|++ ..+...|..|... |.. .+...|-+|.....  .++..|+.
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~   50 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLN   50 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHH
Confidence            478999999 5567889999776 444 35677888876322  24444444

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.80  E-value=0.0061  Score=23.99  Aligned_cols=18  Identities=33%  Similarity=0.947  Sum_probs=8.7

Q ss_pred             ecccccccccCcchHHHHH
Q psy16685         43 QCQVCGKRFTASSNLYYHR   61 (99)
Q Consensus        43 ~C~~C~~~f~~~~~l~~H~   61 (99)
                      .|+.||+.| ..+.|..|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            455555555 333444444

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=95.21  E-value=0.012  Score=24.76  Aligned_cols=24  Identities=38%  Similarity=0.888  Sum_probs=16.8

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGK   49 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   49 (99)
                      |.|..||..+....            .++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            67888887654322            6788888875

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.03  E-value=0.0089  Score=38.58  Aligned_cols=65  Identities=38%  Similarity=0.660  Sum_probs=55.7

Q ss_pred             CCeecccCcCcCCChHHHHHHhh--hcCCC--Cceecc--cccccccCcchHHHHHHhccCCCcchhhhcc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRR--IHSGE--KPHQCQ--VCGKRFTASSNLYYHRMTHIKVNDDFKEILN   76 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~   76 (99)
                      .++.|..|...|.....+..|.+  .|.++  +++.|+  .|+..|.....+..|..+|.+..+..+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLN  358 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccccc
Confidence            36789999999999999999999  79998  899999  7999999999999999999887766654444

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.00  E-value=0.032  Score=23.38  Aligned_cols=22  Identities=23%  Similarity=0.593  Sum_probs=16.0

Q ss_pred             CeecccCcCcCCChHHHHHHhh
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRR   34 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~   34 (99)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5678888888877777766654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=93.82  E-value=0.024  Score=34.72  Aligned_cols=41  Identities=27%  Similarity=0.680  Sum_probs=33.4

Q ss_pred             cccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHH
Q psy16685         16 CSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH   60 (99)
Q Consensus        16 C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H   60 (99)
                      |..|.+.|....-|.+|++    .+.|+|-+|-+..-+-..|..|
T Consensus        13 cwycnrefddekiliqhqk----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceee
Confidence            8899999999988888766    5789999998766666667666

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=93.21  E-value=0.022  Score=34.32  Aligned_cols=44  Identities=32%  Similarity=0.598  Sum_probs=28.7

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhh---cC-------CCCc-----eecccccccccCc
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRI---HS-------GEKP-----HQCQVCGKRFTAS   54 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~---~~-------~~~~-----~~C~~C~~~f~~~   54 (99)
                      ++...|+.|+..|.++.-.....+.   .+       +..|     +.|+.||.++...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            3567899999999987544433332   11       1222     5899999887644

>KOG1146|consensus

Probab=93.04  E-value=0.075  Score=39.68  Aligned_cols=55  Identities=25%  Similarity=0.393  Sum_probs=45.3

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcC-------------------------CCCceecccccccccCcchHHHHHH
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHS-------------------------GEKPHQCQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~-------------------------~~~~~~C~~C~~~f~~~~~l~~H~~   62 (99)
                      +.-.+.+.|+.|+..|+....|..|++..+                         +.++|.|..|...+....+|.+|+.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            344578899999999999999999988711                         1247889999999999999999987

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=92.90  E-value=0.11  Score=26.89  Aligned_cols=25  Identities=28%  Similarity=0.603  Sum_probs=21.7

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      .+.|..|+..|.+...|..|++.+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCcc
Confidence            6899999999999999999999753

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=92.52  E-value=0.094  Score=28.30  Aligned_cols=30  Identities=27%  Similarity=0.741  Sum_probs=23.6

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTAS   54 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   54 (99)
                      ..|+.||..|.-           .+..|..|+.||..|...
T Consensus        10 R~Cp~CG~kFYD-----------Lnk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYD-----------LNKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhcc-----------CCCCCccCCCCCCccCcc
Confidence            369999988854           234788999999988766

The function of members of this family is unknown.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=92.07  E-value=0.15  Score=22.95  Aligned_cols=29  Identities=21%  Similarity=0.575  Sum_probs=21.0

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      .|.|..||..|...           ...+..|+.||....
T Consensus         2 ~Y~C~~Cg~~~~~~-----------~~~~irC~~CG~rIl   30 (44)
T smart00659        2 IYICGECGRENEIK-----------SKDVVRCRECGYRIL   30 (44)
T ss_pred             EEECCCCCCEeecC-----------CCCceECCCCCceEE
Confidence            37899999877543           235789999986543

present in RNA polymerase I, II and III

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=91.60  E-value=0.14  Score=24.50  Aligned_cols=9  Identities=44%  Similarity=1.309  Sum_probs=4.4

Q ss_pred             Cceeccccc
Q psy16685         40 KPHQCQVCG   48 (99)
Q Consensus        40 ~~~~C~~C~   48 (99)
                      .+|.|+.||
T Consensus        49 ~~Y~Cp~CG   57 (61)
T COG2888          49 NPYRCPKCG   57 (61)
T ss_pred             CceECCCcC
Confidence            345555554

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=91.22  E-value=0.23  Score=21.33  Aligned_cols=34  Identities=24%  Similarity=0.664  Sum_probs=23.6

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      ..|+.|+..|.....-     ...+....+|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~-----l~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK-----LPAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHH-----cccCCcEEECCCCCcEee
Confidence            4689999888766532     123445789999988774

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=90.64  E-value=0.2  Score=29.13  Aligned_cols=23  Identities=48%  Similarity=1.155  Sum_probs=13.6

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceeccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCG   48 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   48 (99)
                      -|.|++||..             +.++.|..||.||
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCC
Confidence            4667777643             2345566777776

>KOG2186|consensus

Probab=90.59  E-value=0.3  Score=30.23  Aligned_cols=46  Identities=22%  Similarity=0.472  Sum_probs=34.9

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHH
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   62 (99)
                      |.|..||....-+ .+..|+..-.+ .-|.|.-|+..|.. ..+..|..
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            6799999877644 46678777666 67999999999988 55666655

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=90.55  E-value=0.16  Score=21.45  Aligned_cols=25  Identities=36%  Similarity=0.872  Sum_probs=15.8

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGK   49 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   49 (99)
                      .|.|..||..+...            ..|..|+.|+.
T Consensus         2 ~~~C~~CG~i~~g~------------~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEGE------------EAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeECC------------cCCCcCcCCCC
Confidence            36788888654321            24668888875

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=89.99  E-value=0.083  Score=30.33  Aligned_cols=17  Identities=41%  Similarity=0.921  Sum_probs=13.0

Q ss_pred             ceecccccccccCcchH
Q psy16685         41 PHQCQVCGKRFTASSNL   57 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l   57 (99)
                      .++|+.||.+|.....+
T Consensus        28 ~~~c~~c~~~f~~~e~~   44 (154)
T PRK00464         28 RRECLACGKRFTTFERV   44 (154)
T ss_pred             eeeccccCCcceEeEec
Confidence            48899999998876443

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=89.91  E-value=0.2  Score=25.88  Aligned_cols=30  Identities=30%  Similarity=0.804  Sum_probs=19.2

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      +|.|+.|++.-        ..+  .+...|.|..|+..|.
T Consensus        35 ~~~Cp~C~~~~--------VkR--~a~GIW~C~kCg~~fA   64 (89)
T COG1997          35 KHVCPFCGRTT--------VKR--IATGIWKCRKCGAKFA   64 (89)
T ss_pred             CCcCCCCCCcc--------eee--eccCeEEcCCCCCeec
Confidence            57788887641        111  2345788888887765

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=89.58  E-value=0.21  Score=19.80  Aligned_cols=10  Identities=40%  Similarity=0.976  Sum_probs=7.8

Q ss_pred             eccccccccc
Q psy16685         43 QCQVCGKRFT   52 (99)
Q Consensus        43 ~C~~C~~~f~   52 (99)
                      .|+.||..|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            7888888774

Several members are annotated as putative helicases.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=89.53  E-value=0.48  Score=20.24  Aligned_cols=33  Identities=21%  Similarity=0.588  Sum_probs=23.0

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF   51 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   51 (99)
                      ..|+.|+..|......     +.......+|+.|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            4688999888776643     22334568899998776

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=89.04  E-value=0.18  Score=21.03  Aligned_cols=28  Identities=25%  Similarity=0.693  Sum_probs=17.4

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      |.|..|+..+..+           ...+..|+.||....
T Consensus         1 Y~C~~Cg~~~~~~-----------~~~~irC~~CG~RIl   28 (32)
T PF03604_consen    1 YICGECGAEVELK-----------PGDPIRCPECGHRIL   28 (32)
T ss_dssp             EBESSSSSSE-BS-----------TSSTSSBSSSS-SEE
T ss_pred             CCCCcCCCeeEcC-----------CCCcEECCcCCCeEE
Confidence            5788888766421           234678999986543

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.00  E-value=0.15  Score=24.04  Aligned_cols=26  Identities=27%  Similarity=0.505  Sum_probs=17.2

Q ss_pred             CCCCceecccccccccCcchHHHHHH
Q psy16685         37 SGEKPHQCQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~l~~H~~   62 (99)
                      .|+.-+.|+-|+..|.....+.+|..
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhh
Confidence            44555677777777776666666655

>PHA00626 hypothetical protein

Probab=88.99  E-value=0.14  Score=24.14  Aligned_cols=35  Identities=17%  Similarity=0.363  Sum_probs=20.3

Q ss_pred             ecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCc
Q psy16685         15 VCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTAS   54 (99)
Q Consensus        15 ~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   54 (99)
                      .|+.||..-..+...     .......|.|..||..|...
T Consensus         2 ~CP~CGS~~Ivrcg~-----cr~~snrYkCkdCGY~ft~~   36 (59)
T PHA00626          2 SCPKCGSGNIAKEKT-----MRGWSDDYVCCDCGYNDSKD   36 (59)
T ss_pred             CCCCCCCceeeeece-----ecccCcceEcCCCCCeechh
Confidence            478888642222111     11224679999999888543

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=88.99  E-value=0.41  Score=20.45  Aligned_cols=34  Identities=21%  Similarity=0.455  Sum_probs=22.2

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      ..|+.|+..|.......     ......+.|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCCCCEEECCCCCCEEE
Confidence            57999998887655321     11223578999987764

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=88.32  E-value=0.37  Score=26.71  Aligned_cols=33  Identities=18%  Similarity=0.437  Sum_probs=24.5

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchH
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNL   57 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l   57 (99)
                      ..|+.||..|.-           .+..|..|+.||..|.....+
T Consensus        10 r~Cp~cg~kFYD-----------Lnk~p~vcP~cg~~~~~~~~~   42 (129)
T TIGR02300        10 RICPNTGSKFYD-----------LNRRPAVSPYTGEQFPPEEAL   42 (129)
T ss_pred             ccCCCcCccccc-----------cCCCCccCCCcCCccCcchhh
Confidence            479999988853           234789999999988665443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=87.73  E-value=0.36  Score=21.69  Aligned_cols=30  Identities=20%  Similarity=0.507  Sum_probs=20.3

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      .|.|+.||..+.....          ...+.|+.||..+.
T Consensus         3 ~y~C~~CG~~~~~~~~----------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          3 EYKCARCGREVELDEY----------GTGVRCPYCGYRIL   32 (46)
T ss_pred             EEECCCCCCEEEECCC----------CCceECCCCCCeEE
Confidence            5889999987654221          12689999986543

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=87.58  E-value=0.34  Score=27.94  Aligned_cols=15  Identities=13%  Similarity=0.394  Sum_probs=7.0

Q ss_pred             eecccCcCcCCChHH
Q psy16685         14 HVCSVCSKGFSTSSS   28 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~   28 (99)
                      |.|+.|+..|+....
T Consensus       110 Y~Cp~c~~r~tf~eA  124 (158)
T TIGR00373       110 FICPNMCVRFTFNEA  124 (158)
T ss_pred             EECCCCCcEeeHHHH
Confidence            445555544444433

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=87.50  E-value=0.12  Score=22.40  Aligned_cols=29  Identities=24%  Similarity=0.597  Sum_probs=18.8

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGK   49 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   49 (99)
                      |.|..||..|......       .......|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~-------~~~~~~~CP~Cg~   34 (41)
T smart00834        6 YRCEDCGHTFEVLQKI-------SDDPLATCPECGG   34 (41)
T ss_pred             EEcCCCCCEEEEEEec-------CCCCCCCCCCCCC
Confidence            6799999877643321       1134567888886

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=87.16  E-value=0.28  Score=31.72  Aligned_cols=45  Identities=31%  Similarity=0.530  Sum_probs=38.4

Q ss_pred             Ceehhh--hhcCC--CCeecc--cCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          1 MIYILR--VLISE--KPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         1 l~~h~~--~h~~~--~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      |.+|.+  .|.++  +|+.|+  .|+..|.....+..|...+.+..++.+.
T Consensus       305 l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         305 LTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             ccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            457778  79999  999999  8999999999999999999887766654

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=87.09  E-value=0.14  Score=23.55  Aligned_cols=29  Identities=21%  Similarity=0.620  Sum_probs=18.4

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGK   49 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   49 (99)
                      |.|..|+..|.....+      . ...+..|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~------~-~~~~~~CP~Cg~   34 (52)
T TIGR02605         6 YRCTACGHRFEVLQKM------S-DDPLATCPECGG   34 (52)
T ss_pred             EEeCCCCCEeEEEEec------C-CCCCCCCCCCCC
Confidence            6799999877643221      1 134567888885

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=86.75  E-value=0.5  Score=21.75  Aligned_cols=30  Identities=20%  Similarity=0.577  Sum_probs=20.5

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF   51 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   51 (99)
                      .-|.|..||+.|...          .......|+.||...
T Consensus         5 ~~Y~C~~Cg~~~~~~----------~~~~~irCp~Cg~rI   34 (49)
T COG1996           5 MEYKCARCGREVELD----------QETRGIRCPYCGSRI   34 (49)
T ss_pred             EEEEhhhcCCeeehh----------hccCceeCCCCCcEE
Confidence            358899999888211          123567999998653

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=86.53  E-value=0.36  Score=28.42  Aligned_cols=29  Identities=21%  Similarity=0.587  Sum_probs=14.6

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceeccccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKR   50 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~   50 (99)
                      -|.|+.|+..|+....+.         .-|.|+.||..
T Consensus       117 ~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~  145 (178)
T PRK06266        117 FFFCPNCHIRFTFDEAME---------YGFRCPQCGEM  145 (178)
T ss_pred             EEECCCCCcEEeHHHHhh---------cCCcCCCCCCC
Confidence            355666665555444331         23566666543

>KOG2893|consensus

Probab=86.20  E-value=0.38  Score=29.69  Aligned_cols=48  Identities=21%  Similarity=0.291  Sum_probs=37.4

Q ss_pred             CCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhh
Q psy16685         39 EKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNK   91 (99)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (99)
                      .+|| |=.|.+.|..+..|..|++    .+-|.|.+|-.+..++-.+..|-.-
T Consensus         9 ~kpw-cwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmq   56 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQ   56 (341)
T ss_pred             CCce-eeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhh
Confidence            3555 5679999999999999887    4558999999988887777665433

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=85.73  E-value=0.93  Score=21.69  Aligned_cols=9  Identities=44%  Similarity=1.254  Sum_probs=4.1

Q ss_pred             Cceeccccc
Q psy16685         40 KPHQCQVCG   48 (99)
Q Consensus        40 ~~~~C~~C~   48 (99)
                      .+|.|+.||
T Consensus        47 ~~Y~CP~CG   55 (59)
T PRK14890         47 NPYTCPKCG   55 (59)
T ss_pred             CceECCCCC
Confidence            344444444

>smart00531 TFIIE Transcription initiation factor IIE

Probab=85.38  E-value=0.76  Score=26.08  Aligned_cols=35  Identities=14%  Similarity=0.402  Sum_probs=16.9

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecccccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF   51 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   51 (99)
                      -|.|+.|+..|.....+.. ..  . ...|.|+.||...
T Consensus        99 ~Y~Cp~C~~~y~~~ea~~~-~d--~-~~~f~Cp~Cg~~l  133 (147)
T smart00531       99 YYKCPNCQSKYTFLEANQL-LD--M-DGTFTCPRCGEEL  133 (147)
T ss_pred             EEECcCCCCEeeHHHHHHh-cC--C-CCcEECCCCCCEE
Confidence            4666666666654332211 00  1 2236666666543

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=84.45  E-value=0.61  Score=28.30  Aligned_cols=30  Identities=20%  Similarity=0.283  Sum_probs=21.3

Q ss_pred             cCCCCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685          9 ISEKPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus         9 ~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      .++..|.|..|++.|.....+..|+...+.
T Consensus        73 ~~~~K~~C~lc~KlFkg~eFV~KHI~nKH~  102 (214)
T PF04959_consen   73 EDEDKWRCPLCGKLFKGPEFVRKHIFNKHP  102 (214)
T ss_dssp             SSSEEEEE-SSS-EESSHHHHHHHHHHH-H
T ss_pred             HcCCEECCCCCCcccCChHHHHHHHhhcCH
Confidence            345568899999999999988888876544

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PF14353 CpXC: CpXC protein

Probab=83.92  E-value=0.12  Score=28.54  Aligned_cols=21  Identities=33%  Similarity=0.785  Sum_probs=15.6

Q ss_pred             CceecccccccccCcchHHHH
Q psy16685         40 KPHQCQVCGKRFTASSNLYYH   60 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H   60 (99)
                      ..+.|+.||..|.-...+..|
T Consensus        37 ~~~~CP~Cg~~~~~~~p~lY~   57 (128)
T PF14353_consen   37 FSFTCPSCGHKFRLEYPLLYH   57 (128)
T ss_pred             CEEECCCCCCceecCCCEEEE
Confidence            357999999988776666544

>PRK09678 DNA-binding transcriptional regulator; Provisional

Probab=81.93  E-value=0.48  Score=23.67  Aligned_cols=42  Identities=24%  Similarity=0.471  Sum_probs=25.3

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecc--cccccccCcchH
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ--VCGKRFTASSNL   57 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~f~~~~~l   57 (99)
                      +.|+.||..-....+-.  +.....+..+.|.  .||.+|.....+
T Consensus         2 m~CP~Cg~~a~irtSr~--~s~~~~~~Y~qC~N~eCg~tF~t~es~   45 (72)
T PRK09678          2 FHCPLCQHAAHARTSRY--ITDTTKERYHQCQNVNCSATFITYESV   45 (72)
T ss_pred             ccCCCCCCccEEEEChh--cChhhheeeeecCCCCCCCEEEEEEEE
Confidence            46899987653332211  1112345667897  899998876544

>KOG4173|consensus

Probab=80.35  E-value=0.46  Score=28.66  Aligned_cols=49  Identities=31%  Similarity=0.609  Sum_probs=38.5

Q ss_pred             ecccCcCcCCChHHHHHHhhh-c---------CCCCceec--ccccccccCcchHHHHHHh
Q psy16685         15 VCSVCSKGFSTSSSLNTHRRI-H---------SGEKPHQC--QVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        15 ~C~~c~~~~~~~~~l~~h~~~-~---------~~~~~~~C--~~C~~~f~~~~~l~~H~~~   63 (99)
                      .|..|.+.|++..-|..|+.- |         .|..-|+|  ..|+..|.+....+.|+-.
T Consensus       108 sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  108 SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            699999999999988888653 3         22334788  5799999999999999764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	99
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-11
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-11
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-10
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-10
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-10
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		6e-10
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-10
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-09
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-09
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-09
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		3e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-09
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-08
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		9e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		9e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-07
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		5e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-06
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		3e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		5e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		6e-06
2emj_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-05
2eml_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-05
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2enh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-05
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-05
2eps_A	54	Solution Structure Of The 4th Zinc Finger Domain Of		3e-05
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		4e-05
2ep0_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-05
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
2ep2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
2emp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-05
2em6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-05
2ena_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-05
2ely_A	46	Solution Structure Of The Third Zf-C2h2 Domain From		9e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		1e-04
2eq3_A	46	Solution Structure Of The 17th C2h2 Type Zinc Finge		1e-04
2ep3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		1e-04
2epz_A	46	Solution Structure Of The 4th C2h2 Type Zinc Finger		1e-04
2ysv_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2ytq_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2ytf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2em5_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		3e-04
2enc_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eop_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2yrh_A	44	Solution Structure Of The C2h2-Type Zinc Finger Dom		4e-04
2ytd_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2eor_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-04
2emm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2en1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2eq1_A	46	Solution Structure Of The 9th C2h2 Type Zinc Finger		5e-04
2en6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2yth_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2em9_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2eon_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2ysp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04
2ep1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
          EKP+ C  C K FS SS+L  H+R H+GEKP++C  CGK F+ SS+L  H+ TH 
Sbjct: 2  EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHT 56

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 6   RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
           R    EKP+ C  C K FS  + L  H+R H+GEKP++C  CGK F+   NL+ H+ TH 
Sbjct: 98  RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT 157

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     H   H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
Query: 65 IKVND 69
          ++  D
Sbjct: 86 LRQKD 90

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     H   H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
Query: 65 IKVND 69
          ++  D
Sbjct: 86 LRQKD 90

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     H   H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
Query: 65 IKVND 69
          ++  D
Sbjct: 86 LRQKD 90

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     H   H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
Query: 65 IKVND 69
          ++  D
Sbjct: 86 LRQKD 90

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
          +P+ C  C K F   S +  H  IH+GEKPH+CQVCGK F+ SSNL  H   H 
Sbjct: 28 RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     H   H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
Query: 65 IKVND 69
          ++  D
Sbjct: 86 LRQKD 90

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS  +SLN H R H+GEKP  C +CG++F        H   H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFATLHTRTRHTKIH 85
Query: 65 IKVND 69
          ++  D
Sbjct: 86 LRQKD 90

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 6   RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
           R    E+P+ C +C K F     L  HR IHS EKP +CQ CGK F  S  L  H+  H+
Sbjct: 38  RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97
Query: 66  KVN 68
           + +
Sbjct: 98  QTS 100

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          EKP+ C  C K FS SS L  H+R+H+GEKP++C  CGK F+ +S L  H+  H
Sbjct: 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     H   H
Sbjct: 25 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 84
Query: 65 IK 66
          ++
Sbjct: 85 LR 86

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     H   H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
Query: 65 IK 66
          ++
Sbjct: 86 LR 87

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHR-MTHIK--VN 68
          KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     HR + HI   + 
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILE 61
Query: 69 DDFKEILN 76
          D  +E+L+
Sbjct: 62 DKVEELLS 69

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R+   +KP  C +C + FS  + LN H R H+GEKP  C +CG++F        H   H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATLHTRDRHTKIH 85
Query: 65 IKVND 69
          ++  D
Sbjct: 86 LRQKD 90

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 30/50 (60%)
Query: 16 CSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI 65
          C  C K FS SS L+ HRR H+GEKP++C  CGK F   S+L  H   H 
Sbjct: 21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 7  VLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          V+   +P+ C V  C + FS S  L  H RIH+G+KP QC++C + F+ S +L  H  TH
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 7   VLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRM 62
           V   EKP  C+   C K FS   +L TH RIH+G++P+ C    C K+F  S+NL  H +
Sbjct: 56  VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115
Query: 63  THIKVNDD 70
           TH K  ++
Sbjct: 116 THAKAKNN 123

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +KP+ C  C   F    +L +H+ +H+GEKP++C +CG +F   +NL  H   H
Sbjct: 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 6  RVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMT 63
          R    EKP+ C    C + FS S  L  H+R H+G KP QC+ C ++F+ S +L  H  T
Sbjct: 29 RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRT 88
Query: 64 HI 65
          H 
Sbjct: 89 HT 90

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 12  KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDF 71
           +P+ C VC K F     L  H +IH+G KP++C +C KRF    + + H  +  K  +  
Sbjct: 36  RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAA 95
Query: 72  KEILNLEPVSG 82
           K   N    SG
Sbjct: 96  KAEQNTTEASG 106

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 1   MIYILRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSN 56
           ++  +RV   EKP  C    C K F+ S +L  H+R H+GEKP +C+   C +RF  SS+
Sbjct: 78  LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSD 137
Query: 57  LYYHRMTHI 65
              H   H 
Sbjct: 138 RKKHMHVHT 146

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +R     KP+ C  C    + SSSLN H RIHS E+P +CQ+C      SS L  H  +H
Sbjct: 28 MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSH 87
Query: 65 I 65
Sbjct: 88 T 88

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 15 VCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           C +C K F     LN H+  HSGEKP+ C VCG RF     + YH  +H
Sbjct: 9  ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 5  LRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM 62
          LR    EKP+ C+   C   F+ S  L  H R H+G KP QC VC + F+ S +L  H  
Sbjct: 37 LRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96
Query: 63 TH 64
           H
Sbjct: 97 RH 98

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 10 SEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          SE+P  C+ C K +  +S L+ HRR H G +P  C  CGK F   S +  H   H
Sbjct: 1  SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 5  LRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM 62
          LR    EKP+ C    C   F+ S  L  H R H+G +P QCQ C + F+ S +L  H  
Sbjct: 27 LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK 86
Query: 63 THI 65
           H 
Sbjct: 87 RHF 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 5  LRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM 62
          LR    EKP+ C    C   F+ S  L  H R H+G +P QCQ C + F+ S +L  H  
Sbjct: 28 LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK 87
Query: 63 THI 65
           H 
Sbjct: 88 RHF 90

>pdb|2EMJ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 612- 644) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP  C+ C K FS SS L TH+RIH+GEKP
Sbjct: 10 EKPFECAECGKSFSISSQLATHQRIHTGEKP 40

>pdb|2EML|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 752- 784) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ CSVC K FS   SL+ H+RIHSG+KP
Sbjct: 10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP++C+ C K F   S LN HRRIH+GEKP
Sbjct: 10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|2ENH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 556- 588) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C VC K FS  +SL  H+R+HSGEKP
Sbjct: 10 EKPYECDVCRKAFSHHASLTQHQRVHSGEKP 40

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+VC  C K F  S+ L  H+RIH+GEKP
Sbjct: 10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 16 CSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK 66
          CS C K F ++  LN H R H+GEKP++C+ C       ++L YH   H K
Sbjct: 7  CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 1   MIYILRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQC--QVCGKRFTASSN 56
           ++  +R    EKPH C+   C K +S   +L TH R H+GEKP+ C  + C K F+ +S+
Sbjct: 55  LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASD 114
Query: 57  LYYHR 61
              H+
Sbjct: 115 RAKHQ 119

>pdb|2EPS|A Chain A, Solution Structure Of The 4th Zinc Finger Domain Of Zinc Finger Protein 278 Length = 54

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 12 KPHVCSVCSKGFSTSSSLNTH-RRIHSGEKPHQCQV 46
          KP++C  C KGFS    LN H +++H+ E+PH+CQV
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 46

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 12 KPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQC--QVCGKRFTASSNLYYHRMTH 64
          + H+CS   C K +  SS L  H R H+GEKP  C  + C +RF  S  L  HR TH
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2EP0|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 528- 560) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C VC K F   SSL  H+RIH+GEKP
Sbjct: 10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP 40

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          E+P++C+VC K F+  S+L  H++IH+GEKP
Sbjct: 10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|2EP2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 603- 635) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ CS+C K F+  S L+ H++IH+GEKP
Sbjct: 10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKP 40

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C+ C K FS +S L  H+RIH+GEKP
Sbjct: 10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2EMP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 536- 568) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          KP++C+ C K FS  SSL TH+ IH+GEKP
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKP 40

>pdb|2EM6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 199- 231) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EK + C VC K FS SS L TH+R+H+GEKP
Sbjct: 10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP 40

>pdb|2ENA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 311- 343) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 9  ISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
           +EKP  C  C K F   S+LN+HR IH+GEKP
Sbjct: 8  TAEKPFRCDTCDKSFRQRSALNSHRMIHTGEKP 40

>pdb|2ELY|A Chain A, Solution Structure Of The Third Zf-C2h2 Domain From Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP  C  C KGFS  S+LN H ++H+GEKP
Sbjct: 10 EKPFKCVECGKGFSRRSALNVHHKLHTGEKP 40

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 15 VCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
          VC VC++ F+    L  H R H+ EKP+ C +C + FT    L  H
Sbjct: 4  VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>pdb|2EQ3|A Chain A, Solution Structure Of The 17th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C+ C K FS  SSL TH+ IH+G+KP
Sbjct: 10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKP 40

>pdb|2EP3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 631- 663) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C+ C K F+  S+L TH++IH+GEKP
Sbjct: 10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKP 40

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C  C K F+  ++L  H+RIH+GEKP
Sbjct: 10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|2EPZ|A Chain A, Solution Structure Of The 4th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 20/31 (64%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP  C  C K FS    LN HRRIH+GEKP
Sbjct: 10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP 40

>pdb|2YSV|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 17 In Zinc Finger Protein 473 Length = 42

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE 39
          EKP+VC  C K F+ SS L+ HRR+H+GE
Sbjct: 8  EKPYVCQECGKAFTQSSCLSIHRRVHTGE 36

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C VCSK F+  + L  H++ H+GEKP
Sbjct: 10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

>pdb|2YTQ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 775- 807) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 21/31 (67%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ CS C K FS+ S L  H R HSGEKP
Sbjct: 10 EKPYGCSECGKAFSSKSYLIIHMRTHSGEKP 40

>pdb|2YTF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 607- 639) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP  CS C K F+T S+L  H+R H+GEKP
Sbjct: 10 EKPFECSECQKAFNTKSNLIVHQRTHTGEKP 40

>pdb|2EM5|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 768- 800) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          K H C  C +GF+  S LN H+RIH+GEKP
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKP 40

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          KP+ C+ C K FS +S L  H+R+H+GEKP
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2ENC|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 395- 427) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP  C  C KGF T+S   +H+R HSGEKP
Sbjct: 10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKP 40

>pdb|2EOP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 719- 751) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKPH C  C K FS +S L  H+RIH+GE P
Sbjct: 10 EKPHECRECGKSFSFNSQLIVHQRIHTGENP 40

>pdb|2YRH|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (699- 729) From Zinc Finger Protein 473 Length = 44

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          +KP VC+ C K F  SS L+ H+RIHSGEKP
Sbjct: 8  KKPLVCNECGKTFRQSSCLSKHQRIHSGEKP 38

>pdb|2YTD|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 426- 458) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ CS C K F   + LN HRRIH+G +P
Sbjct: 10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRP 40

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C  C K FS ++ L  H+R+H+GEKP
Sbjct: 10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40

>pdb|2EOR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 255- 287) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C  C K F   S L  H+RIH+GEKP
Sbjct: 10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 16 CSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
          C  C K F +   L  H R H+GEKP +C  CGK +    NL  H
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>pdb|2EMM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 544- 576) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          E+PH C+ C K F  S+ L  H+RIH+GEKP
Sbjct: 10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>pdb|2EN1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 563- 595) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP  C  C K F+ +S L++H+R+H+GEKP
Sbjct: 10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKP 40

>pdb|2EQ1|A Chain A, Solution Structure Of The 9th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C+ C K F   S+L TH+ IH+GEKP
Sbjct: 10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEKP 40

>pdb|2EN6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 887- 919) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C+ C K FS  S L+ H+R H+GEKP
Sbjct: 10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKP 40

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C+ C K F+ +S L  H RIH+GEKP
Sbjct: 10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|2YTH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 479- 511) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP  C  C K F+ +S L++H+R+H+GEKP
Sbjct: 10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKP 40

>pdb|2EM9|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 367- 399) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C  C K F  +S L  H+R+HSGEKP
Sbjct: 10 EKPYNCKECGKSFRWASCLLKHQRVHSGEKP 40

>pdb|2EON|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 397- 429) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C VC K F  SS L  H  +HSGE+P
Sbjct: 10 EKPYKCQVCGKAFRVSSHLVQHHSVHSGERP 40

>pdb|2YSP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 507- 539) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 24/31 (77%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ C  C KG+++  +L+ H+++H+GE+P
Sbjct: 10 EKPYKCEKCGKGYNSKFNLDMHQKVHTGERP 40

>pdb|2EP1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 435- 467) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
          EKP+ CS C K F   S L+ H+RIH+GE P
Sbjct: 10 EKPYECSDCGKSFIKKSQLHVHQRIHTGENP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	99
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-22
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-24
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-20
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-19
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-23
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-21
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-23
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-22
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-20
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-22
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-14
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-22
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-22
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-22
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-22
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-22
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-21
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-10
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-20
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-18
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-19
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-19
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-17
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-16
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-16
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-14
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-14
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-13
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-13
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-12
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-13
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-13
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-13
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-13
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-13
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	9e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-13
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-13
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-13
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-11
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-12
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-10
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-12
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-12
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	8e-12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-11
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-11
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-10
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	8e-10
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-10
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-07
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	1e-06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	8e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	3e-05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	3e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	3e-06
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	6e-06
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-05
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	2e-04
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	2e-04
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	5e-04
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	6e-04

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 87.1 bits (217), Expect = 2e-24
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     H   H
Sbjct: 32 QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 82.5 bits (205), Expect = 1e-22
 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          E+P+ C V  C + FS S SL  H RIH+G+KP QC++C + F+ S +L  H  TH
Sbjct: 2  ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 57

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 53.2 bits (129), Expect = 4e-11
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          EKP  C +C + F+ S     H +IH  +K
Sbjct: 60 EKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 87.2 bits (217), Expect = 2e-24
 Identities = 22/54 (40%), Positives = 27/54 (50%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
               C +C K F     LN H+  HSGEKP+ C VCG RF     + YH  +H
Sbjct: 5  SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 75.6 bits (187), Expect = 8e-20
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE--KPHQCQVCGKRFTASSNLYYH-RMTH 64
          EKP+ C VC   F     ++ H R H G   KP+ CQ CGK F+   +L  H +  H
Sbjct: 33 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.9 bits (115), Expect = 6e-09
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 36 HSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           SG     C++CGK F    +L  H+++H
Sbjct: 2  SSGSSGVACEICGKIFRDVYHLNRHKLSH 30

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.5 bits (114), Expect = 8e-09
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 10 SEKPHVCSVCSKGFSTSSSLNTH-RRIHSGEK 40
            KP++C  C KGFS    LN H +++HSG  
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 85.6 bits (213), Expect = 1e-23
 Identities = 24/54 (44%), Positives = 30/54 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           KP+ C  C    + SSSLN H RIHS E+P +CQ+C      SS L  H  +H
Sbjct: 34 VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 85.6 bits (213), Expect = 1e-23
 Identities = 23/54 (42%), Positives = 28/54 (51%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
            PH C VC K FS    L TH R H+G KP++C+ C      SS+L  H   H
Sbjct: 6  SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 59.7 bits (146), Expect = 2e-13
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E+P  C +C      SS L  H R H+G+     
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 47.4 bits (114), Expect = 9e-09
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 36 HSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
               PH+C+VCGK F+    L  H   H
Sbjct: 3  SGSSGPHKCEVCGKCFSRKDKLKTHMRCH 31

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 84.9 bits (211), Expect = 1e-23
 Identities = 23/53 (43%), Positives = 29/53 (54%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          KP  C +C + FS S  L TH R H+GEKP  C +CG++F  S     HR   
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 74.5 bits (184), Expect = 2e-19
 Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 4/57 (7%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHR---MTH 64
          EKP  C +C + F+ S     HR I     P       +  + + +L          
Sbjct: 29 EKPFACDICGRKFARSDERKRHRDIQ-HILPILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.3 bits (111), Expect = 2e-08
 Identities = 5/33 (15%), Positives = 10/33 (30%), Gaps = 3/33 (9%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHR---RIHSGEK 40
            P +     +  S +  L       +   GE+
Sbjct: 56 ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 85.6 bits (213), Expect = 2e-23
 Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
           + HVC+ C K F  SS L  H+ +H+GEKP QC    CGKRF+   NL  H   H
Sbjct: 32 PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 81.0 bits (201), Expect = 1e-21
 Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 4/58 (6%)

Query: 11  EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
           EKP  C+   C K FS   +L TH RIH+G++P+ C    C K+F  S+NL  H +TH
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 78.3 bits (194), Expect = 1e-20
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 9  ISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +  +   C    C+K F  +S++  H   H G + H C  CGK F  SS L  H++ H
Sbjct: 1  MEPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH 57

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 56.0 bits (136), Expect = 8e-12
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 11  EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQ 43
           ++P+VC    C+K F+ S++L +H   H+  K +Q
Sbjct: 90  DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 84.4 bits (209), Expect = 2e-23
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHS---GEKPHQCQVCGKRFTASSNLYYHRMTH 64
               C +C       +SLN H+R H+         C+ CGKRF    ++  HR   
Sbjct: 5  SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.6 bits (129), Expect = 2e-11
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 36 HSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           SG    QC++CG      ++L +H+  H
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKH 30

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.3 bits (118), Expect = 1e-09
 Identities = 8/39 (20%), Positives = 9/39 (23%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGK 49
               C  C K F    S+  HR           Q    
Sbjct: 36 ALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 82.5 bits (205), Expect = 1e-22
 Identities = 27/54 (50%), Positives = 33/54 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +P+ C  C K F   S +  H  IH+GEKPH+CQVCGK F+ SSNL  H   H
Sbjct: 27 TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.5 bits (187), Expect = 6e-20
 Identities = 23/49 (46%), Positives = 30/49 (61%)

Query: 16 CSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          C +C K F  SS+L+TH  IHS  +P+ CQ CGKRF   S++  H   H
Sbjct: 4  CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH 52

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 47.4 bits (114), Expect = 7e-09
 Identities = 18/28 (64%), Positives = 20/28 (71%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSG 38
          EKPH C VC K FS SS+L TH R H+G
Sbjct: 55 EKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 81.3 bits (202), Expect = 2e-22
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +KP+ C  C   F    +L +H+ +H+GEKP++C +CG +F   +NL  H   H
Sbjct: 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 61.7 bits (151), Expect = 2e-14
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 26 SSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
              + H  +   +KP++C  C   F    NL  H+  H
Sbjct: 2  GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH 40

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 54.8 bits (133), Expect = 6e-12
 Identities = 17/32 (53%), Positives = 24/32 (75%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          EKP+ C++C   F+  ++L TH RIHSGEKP+
Sbjct: 43 EKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.3 bits (202), Expect = 2e-22
 Identities = 25/54 (46%), Positives = 32/54 (59%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           + + C  C K FS SS L+ HRR H+GEKP++C  CGK F   S+L  H   H
Sbjct: 16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.7 bits (151), Expect = 1e-14
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 26 SSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          S S           + ++C  CGK F+ SS+L  HR TH
Sbjct: 3  SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 41

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.8 bits (128), Expect = 4e-11
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          EKP+ C  C K F   S L  H R+H+G  P 
Sbjct: 44 EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 84.8 bits (211), Expect = 3e-22
 Identities = 26/54 (48%), Positives = 35/54 (64%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           EKP+ C  C K FS  + L  H+R H+GEKP++C  CGK F+   NL+ H+ TH
Sbjct: 103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 84.0 bits (209), Expect = 4e-22
 Identities = 26/54 (48%), Positives = 34/54 (62%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          EKP+ C  C K FS S  L  H+R H+GEKP++C  CGK F+   +L  H+ TH
Sbjct: 19 EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 82.9 bits (206), Expect = 1e-21
 Identities = 26/54 (48%), Positives = 34/54 (62%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           EKP+ C  C K FS    L  H+R H+GEKP++C  CGK F+  +NL  H+ TH
Sbjct: 47  EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 82.9 bits (206), Expect = 1e-21
 Identities = 25/54 (46%), Positives = 35/54 (64%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           EKP+ C  C K FS  ++L  H+R H+GEKP+ C  CGK F+  ++L  H+ TH
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 82.5 bits (205), Expect = 2e-21
 Identities = 26/54 (48%), Positives = 35/54 (64%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           EKP+ C  C K FS   +L+TH+R H+GEKP++C  CGK F+    L  H+ TH
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 66.7 bits (164), Expect = 2e-15
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 23 FSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             SSS      +  GEKP+ C  CGK F+ S +L  H+ TH
Sbjct: 3  EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH 44

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 54.8 bits (133), Expect = 6e-11
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP 41
           EKP+ C  C K FS   +LN H+R H+G+K 
Sbjct: 159 EKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 82.6 bits (205), Expect = 3e-22
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          EKP+ C    C + FS S  L  H+R H+G KP QC+ C ++F+ S +L  H  TH
Sbjct: 34 EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 81.8 bits (203), Expect = 6e-22
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
            KP  C  C + FS S  L TH R H+GEKP  C+   C K+F  S  L  H   H
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 77.9 bits (193), Expect = 2e-20
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)

Query: 11 EKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
          ++P +C+   C+K +   S L  H R H+GEKP+QC    C +RF+ S  L  H+  H
Sbjct: 4  KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 37 SGEKPHQC--QVCGKRFTASSNLYYHRMTH 64
          S ++P  C    C KR+   S+L  H   H
Sbjct: 2  SEKRPFMCAYPGCNKRYFKLSHLQMHSRKH 31

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 82.1 bits (204), Expect = 4e-22
 Identities = 25/54 (46%), Positives = 30/54 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          E+P+ C +C K F     L  HR IHS EKP +CQ CGK F  S  L  H+  H
Sbjct: 43 ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 81.3 bits (202), Expect = 7e-22
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +K  +C  C + F+ S +L  H R H+ E+P+ C +C K F    +L  HR  H
Sbjct: 15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH 68

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 64.0 bits (157), Expect = 5e-15
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 26 SSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          SS  +  R     +K   C+ CG+ FT S NL  H  TH
Sbjct: 2  SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH 40

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 58.6 bits (143), Expect = 5e-13
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
           EKP  C  C KGF  S +L  H+ +H        
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 81.0 bits (201), Expect = 4e-22
 Identities = 18/54 (33%), Positives = 24/54 (44%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
            P  CS CS   S+ ++L  H RIH  ++P +C  C       SNL  H    
Sbjct: 7  GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 3e-10
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          ++P  C+ CS      S+L+ H +   G+     
Sbjct: 35 DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.9 bits (115), Expect = 4e-09
 Identities = 7/31 (22%), Positives = 11/31 (35%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             S   P +C  C    ++ + L  H   H
Sbjct: 2  SSGSSGHPEKCSECSYSCSSKAALRIHERIH 32

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 80.2 bits (199), Expect = 6e-22
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          EKP+ C  C K FS SS L  H+R+H+GEKP++C  CGK F+ +S L  H+  H
Sbjct: 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.8 bits (133), Expect = 7e-12
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 29 LNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +    IHSGEKP+ C  CGK F+ SS L  H+  H
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH 37

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.4 bits (132), Expect = 9e-12
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          EKP+ C  C K FS +S L  H+RIH+     
Sbjct: 40 EKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 79.1 bits (196), Expect = 2e-21
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRI--HSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV 67
          E  + C VCS+ ++  S+   H         K + C  C K FT   N+  H     K+
Sbjct: 8  EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 51.0 bits (123), Expect = 2e-10
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
              GE  ++C+VC + +T  SN   H +T 
Sbjct: 3  FTKEGEHTYRCKVCSRVYTHISNFCRHYVTS 33

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 78.3 bits (194), Expect = 3e-21
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
          +  VC VC++ F+    L  H R H+ EKP+ C +C + FT    L  H
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.9 bits (110), Expect = 1e-08
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTH-RRIHSGEK 40
          EKP+ C +C++ F+    L  H ++IHSG  
Sbjct: 28 EKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 77.6 bits (192), Expect = 8e-21
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE--KPHQCQVCGKRFTASSNLYYH-RMTH 64
          EKP+ C +C   F+ S ++  H      E      C  C       S+L  H R  H
Sbjct: 13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 65.6 bits (161), Expect = 4e-16
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 28 SLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          S  +  R HSGEKP++C +C  RFT S  +  H +  
Sbjct: 2  SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK 38

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.2 bits (121), Expect = 5e-10
 Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 1/34 (2%)

Query: 10 SEKPHVCSVCSKGFSTSSSLNTH-RRIHSGEKPH 42
          +     C  C    +  S L  H R+ HS   P 
Sbjct: 42 NVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 78.3 bits (194), Expect = 1e-20
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +P+ C VC K F     L  H +IH+G KP++C +C KRF    +   HR   
Sbjct: 35 LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVT 86

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 77.1 bits (191), Expect = 3e-20
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +K + C  C K F+  S  + H  +H G +P+ C VCGK+F    +L  H   H
Sbjct: 8  DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 71.3 bits (176), Expect = 5e-18
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNL 57
            KP+ C++C+K F    S   HR + S  K ++     +  T +S  
Sbjct: 63  IKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 48.2 bits (116), Expect = 5e-09
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             SG+K + CQ CGK FT  S    H   H
Sbjct: 3  SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMH 32

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 79.3 bits (196), Expect = 1e-20
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 11  EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
           EKP  C    C K F+ S +L  H+R H+GEKP +C+   C +RF  SS+   H   H
Sbjct: 88  EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 73.1 bits (180), Expect = 4e-18
 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 12  KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
               C    K F     L  H R+H+GEKP  C    CGK F  S NL  H+ TH
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 70.8 bits (174), Expect = 3e-17
 Identities = 17/63 (26%), Positives = 20/63 (31%), Gaps = 9/63 (14%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQ---------CQVCGKRFTASSNLYYHR 61
          +       C + FST   L TH  +     P Q         C   GK F A   L  H 
Sbjct: 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82

Query: 62 MTH 64
            H
Sbjct: 83 RVH 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.8 bits (135), Expect = 2e-11
 Identities = 5/46 (10%), Positives = 11/46 (23%)

Query: 19 CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
                      + + I   +     + C + F+    L  H    
Sbjct: 3  SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME 48

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.4 bits (134), Expect = 2e-11
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 11  EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQC 44
           EKP  C    C + F+ SS    H  +H+ +K    
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 77.2 bits (191), Expect = 2e-20
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          EKP+ C    C   F+ S  L  H R H+G +P QCQ C + F+ S +L  H   H
Sbjct: 33 EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 70.6 bits (174), Expect = 6e-18
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
                + C K ++ SS L  H R H+GEKP+ C    CG +F  S  L  H   H
Sbjct: 5  THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 36 HSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +         CGK +T SS+L  H  TH
Sbjct: 2  RTATHTCDYAGCGKTYTKSSHLKAHLRTH 30

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 77.5 bits (192), Expect = 3e-20
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH-RMTHI 65
               C  C K F +   L  H R H+GEKP +C  CGK +    NL  H     +
Sbjct: 5  SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 77.2 bits (191), Expect = 4e-20
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
           E+   CSVC + F     L  H   H+GE P++C  C ++F    +L  H
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 75.6 bits (187), Expect = 2e-19
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRR---IHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          EKP  C  C K +    +L  H     ++  E+   C VC + F     L  H ++H
Sbjct: 33 EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 11  EKPHVCSVCSKGFSTSSSLNTH-RRIHSGEK 40
           E P+ CS CS+ F     L +H  ++HSG  
Sbjct: 92  EMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.0 bits (110), Expect = 6e-08
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 36 HSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           SG    +C  C K+F +   L  H   H
Sbjct: 2  SSGSSGVECPTCHKKFLSKYYLKVHNRKH 30

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 76.1 bits (188), Expect = 6e-20
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          EKP+ C+   C   F+ S  L  H R H+G KP QC VC + F+ S +L  H   H
Sbjct: 43 EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 71.9 bits (177), Expect = 3e-18
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQC--QVCGKRFTASSNLYYHRMTH 64
           + H C    C+K ++ SS L  H R H+GEKP++C  + C  RF  S  L  H   H
Sbjct: 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.9 bits (107), Expect = 8e-08
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 23 FSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
            +S      RRIH  + P     C K +T SS+L  H  TH
Sbjct: 3  SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTH 40

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 74.9 bits (185), Expect = 1e-19
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRI-HSGEKPHQCQ--VCGKRFTASSNLYYHRMTH 64
               C    C + FS    LN H++  H  +K   C    CGK F    +L  H   H
Sbjct: 5  SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 69.1 bits (170), Expect = 2e-17
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 11 EKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF 51
          +K   C    C K F+    L  H ++HS  + + C+  G   
Sbjct: 36 QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.5 bits (101), Expect = 5e-07
 Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 3/32 (9%)

Query: 36 HSGEKPHQCQV--CGKRFTASSNLYYH-RMTH 64
           SG     C    CG+ F+    L +H +  H
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 75.3 bits (186), Expect = 1e-19
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE----KPHQCQVCGKRFTASSNLYYHRMTH 64
          EKP+ CS C K F     L+ H + +           C  CGK FT  + +  H    
Sbjct: 13 EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 64.9 bits (159), Expect = 1e-15
 Identities = 9/42 (21%), Positives = 16/42 (38%)

Query: 10 SEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF 51
               VCS C K F+  +++  H    +G    + +  G   
Sbjct: 44 VPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 58.3 bits (142), Expect = 4e-13
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 28 SLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          S  +  R H+GEKP+ C  C K F     L  H   +
Sbjct: 2  SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 38

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 73.0 bits (180), Expect = 3e-19
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTH-RRIHSGEKPHQCQVCGKRFT 52
           KP++C  C KGFS    LN H +++H+ E+PH+CQV     +
Sbjct: 10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 47.6 bits (114), Expect = 3e-09
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYH-RMTH 64
          +     S  KP+ CQ CGK F+   +L  H +  H
Sbjct: 2  SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 75.3 bits (186), Expect = 9e-19
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 11 EKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQC--QVCGKRFTASSNLYYHRMTH 64
          EKP  C    C KGF++   L  H   H+GEK   C    C  RFT  +N+  H    
Sbjct: 40 EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 74.2 bits (183), Expect = 3e-18
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQC--QVCGKRFTASSNLYYHRMTH 64
           K ++CS   C   ++ +  L  H   H+GEKP  C  + C K FT+  +L  H +TH
Sbjct: 10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 68.4 bits (168), Expect = 4e-16
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 11  EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQC--QVCGKRFTASSNLYYHRMTH 64
              +VC    C K F   + L  H+  H+ + P++C  + C KRF+  S L  H   H
Sbjct: 102 ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 68.0 bits (167), Expect = 8e-16
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 11  EKPHVCS--VCSKGFSTSSSLNTHRRIHSGEK--PHQCQV--CGKRFTASSNLYYHRMTH 64
           EK   C    C   F+T +++  H       K   + C    CGK F   + L  H+ +H
Sbjct: 70  EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 62.6 bits (153), Expect = 7e-14
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 11  EKPHVCS--VCSKGFSTSSSLNTHRRIHSG---EKPHQCQVCGKRFTASSNLYYHRMTH 64
           + P+ C    C K FS  S L  H ++H+G   +K   C   GK +  +  L +    H
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW--TLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 7/35 (20%), Positives = 12/35 (34%), Gaps = 2/35 (5%)

Query: 32 HRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
           + +    K + C    CG  +  +  L  H   H
Sbjct: 3  EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH 37

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 72.3 bits (178), Expect = 9e-19
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           +P+ C V  C + FS S  L  H RIH+G+KP QC++C + F+ S +L  H  TH
Sbjct: 17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 2e-06
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHS 37
          +KP  C +C + FS S  L TH R H+
Sbjct: 47 QKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.6 bits (93), Expect = 7e-06
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 25 TSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
               N    +    +P+ C V  C +RF+ S  L  H   H
Sbjct: 3  PHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIH 44

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.6 bits (184), Expect = 1e-18
 Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 5/59 (8%)

Query: 11  EKPHVC--SVCSKGFSTSSSLNTH-RRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
           EKP++C    CSK FS +S    H  R HS EKP+ C++  C KR+T  S+L  H  T 
Sbjct: 95  EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 73.8 bits (182), Expect = 2e-18
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 7/61 (11%)

Query: 11 EKPHVCSVC-----SKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMT 63
           K  VC         + F     L  H R H+GEKPH+C    C K ++   NL  H  +
Sbjct: 32 RKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91

Query: 64 H 64
          H
Sbjct: 92 H 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 72.6 bits (179), Expect = 5e-18
 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)

Query: 11  EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQ--VCGKRFTASSNLYYHRM-TH 64
           EKPH C+   C K +S   +L TH R H+GEKP+ C+   C K F+ +S+   H+  TH
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 68.4 bits (168), Expect = 2e-16
 Identities = 16/62 (25%), Positives = 19/62 (30%), Gaps = 8/62 (12%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTH---RRIHSGEKPHQCQVCG-----KRFTASSNLYYHRM 62
          E       CS+ F +   L  H     IH   K   C   G     + F A   L  H  
Sbjct: 1  ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 63 TH 64
           H
Sbjct: 61 RH 62

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.1 bits (105), Expect = 5e-07
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 11  EKPHVCSV--CSKGFSTSSSLNTHRRIHSG 38
           EKP+VC +  C+K ++  SSL  H +   G
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 69.0 bits (169), Expect = 2e-17
 Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
           + H+CS   C K +  SS L  H R H+GEKP  C    C +RF  S  L  HR TH
Sbjct: 15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 43.5 bits (103), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 26 SSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
          SS  +  +   S  + H C    CGK +  SS+L  H  TH
Sbjct: 2  SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH 42

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 65.7 bits (161), Expect = 4e-16
 Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 3/57 (5%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM-TH 64
          + P+ C    C K FS  S L  H ++H+G    +   C       +    H    H
Sbjct: 29 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 64.9 bits (159), Expect = 9e-16
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 14 HVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQC--QVCGKRFTASSNLYYHRMTH 64
          +VC    C K F   + L  H+  H+ + P++C  + C KRF+  S L  H   H
Sbjct: 2  YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 4e-14
 Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCG 48
          EKP  C  C KGF T+S   +H+R HSGEKP      G
Sbjct: 10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 2e-12
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP +C+ CGK F  +S  Y H+ +H
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 5e-14
 Identities = 16/35 (45%), Positives = 25/35 (71%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ 45
          E+P++C+VC K F+  S+L  H++IH+GEKP    
Sbjct: 10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 5e-12
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GE+P+ C VCGK FT  SNL  H+  H
Sbjct: 2  SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 7e-14
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+VC K F  S+ LN H R+H+ E     
Sbjct: 10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 4e-11
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
               +GEKP+ C VCGK F  S++L  H   H
Sbjct: 3  SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 59.1 bits (144), Expect = 8e-14
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C  C KGFS  S+LN H ++H+GEKP   
Sbjct: 10 EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP +C  CGK F+  S L  H   H
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 8e-14
 Identities = 19/35 (54%), Positives = 22/35 (62%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ 45
          EKP+ C VC K F   SSL  H+RIH+GEKP    
Sbjct: 10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 5e-12
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C VC K F   S+L  H+  H
Sbjct: 2  SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          ++P+ C  C K F T SSL  HRR H+GEKP   
Sbjct: 10 QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 1e-11
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G++P++C  CGK F   S+L  HR +H
Sbjct: 2  SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP++C+ C K F+  S+L  H++IH+ +KP   
Sbjct: 10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 7e-12
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP+ C  CGK FT  SNL  H+  H
Sbjct: 2  SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
           KP+VC+ C K F + S L  H R H+GE     
Sbjct: 10 MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G KP+ C  CGK F + S L  H  TH
Sbjct: 2  SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ CS C K F+  S L+ H++ H+GE+    
Sbjct: 10 EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 6e-12
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK FT  S L+ H+ +H
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 17/34 (50%), Positives = 24/34 (70%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ CS+C K F+  S L+ H++IH+GEKP   
Sbjct: 10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-11
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C +CGK FT  S L+ H+  H
Sbjct: 2  SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+VC  C K F  S+ L  H+RIH+GEKP   
Sbjct: 10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP+ C  CGK F  S+ L  H+  H
Sbjct: 2  SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
           KP+ CS C+K FS  S L  H+R H+G KP   
Sbjct: 10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 53.3 bits (129), Expect = 2e-11
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G KP+ C  C K F+  S L  H+ +H
Sbjct: 2  SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C +C K F   S LN H  +H+ EKP   
Sbjct: 10 EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-12
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP +C +CGK F   S L  H M H
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F   S L  H R H+G      
Sbjct: 10 EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.1 bits (126), Expect = 4e-11
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP++C  CGK F   S L  H  TH
Sbjct: 2  SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E P +CS C K F+  ++L  H++IH+GE+P   
Sbjct: 10 ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 7e-12
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GE P  C  CGK FT  +NL  H+  H
Sbjct: 2  SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
           K H C  C +GF+  S LN H+RIH+GEKP   
Sbjct: 10 TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 4e-11
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     S  K HQC  CG+ FT  S+L  H+  H
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 13/34 (38%), Positives = 24/34 (70%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C KG+++  +L+ H+++H+GE+P   
Sbjct: 10 EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 5e-12
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C+ CGK + +  NL  H+  H
Sbjct: 2  SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 19/34 (55%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EK + C VC K FS SS L TH+R+H+GEKP   
Sbjct: 10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-12
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +      GEK ++C VCGK F+ SS+L  H+  H
Sbjct: 2  SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 58.3 bits (142), Expect = 1e-13
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  CS C K FS+ S L  H++ H+ EKP   
Sbjct: 8  EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.4 bits (111), Expect = 8e-09
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             SGEKP  C  C K F++ S L  H+ TH
Sbjct: 3  SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-13
 Identities = 17/34 (50%), Positives = 24/34 (70%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F+  S+L TH++IH+GEKP   
Sbjct: 10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 5e-12
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK FT  SNL+ H+  H
Sbjct: 2  SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-13
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ CS C K FS S  L  H   H+ EKP   
Sbjct: 10 EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 1e-10
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +      GEKP+QC  CGK F+ S  L  H +TH
Sbjct: 2  SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C+ C K F   S L  H+R H  +K    
Sbjct: 10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 4e-10
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP +C  CGK F   S L  H+ TH
Sbjct: 2  SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E+ H CS C K F  +S+   HRRIH+GEKP   
Sbjct: 10 ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 4e-12
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +      GE+ H+C  CGK F  +SN   HR  H
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 20/34 (58%), Positives = 24/34 (70%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ CSVC K FS   SL+ H+RIHSG+KP   
Sbjct: 10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 6e-11
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
               +GEKP++C VCGK F+   +L  H+  H
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  CS C K F+T S+L  H+R H+GEKP   
Sbjct: 10 EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-11
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP +C  C K F   SNL  H+ TH
Sbjct: 2  SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 19/34 (55%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ CS C K FS+ S L  H R HSGEKP   
Sbjct: 10 EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 7e-12
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP+ C  CGK F++ S L  H  TH
Sbjct: 2  SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ CS C K F   S L+ H+RIH+GE P   
Sbjct: 10 EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F   S L+ H+  H
Sbjct: 2  SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-13
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ CS C K F+  S L  H++ H+GE+    
Sbjct: 10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 5e-12
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK FT  S L  H+  H
Sbjct: 2  SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 57.9 bits (141), Expect = 2e-13
 Identities = 20/34 (58%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C+ C K FS SS L TH+RIH+GEKP   
Sbjct: 10 EKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP +C  CGK F+ SS L  H+  H
Sbjct: 2  SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-13
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C KG+     L+ H+R+H+GEK    
Sbjct: 10 EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP++C  CGK +    +L +H+  H
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-13
 Identities = 19/34 (55%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C  C K FS    LN HRRIH+GEKP   
Sbjct: 10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP  C  CGK F+    L  HR  H
Sbjct: 2  SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 2e-13
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C KGF     L TH  +H+GEKP   
Sbjct: 10 EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.2 bits (134), Expect = 2e-12
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C+ CGK F    +LY H M H
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-13
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E+ + CS C K F+  S+L  H+RIH+GEKP   
Sbjct: 10 ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 6e-11
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GE+ ++C  CGK F   S L  H+  H
Sbjct: 2  SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-13
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C KG++   +L+ H+R+H GEK    
Sbjct: 10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-12
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     S EKP++C+ CGK +    NL  H+  H
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 58.0 bits (141), Expect = 3e-13
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C K F  +S L  H+R+HSGEKP   
Sbjct: 10 EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 52.6 bits (127), Expect = 3e-11
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP+ C+ CGK F  +S L  H+  H
Sbjct: 2  SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 57.5 bits (140), Expect = 3e-13
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E P+ CS C K F+    L +H+R H+GE     
Sbjct: 8  ENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 33 RRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
              SGE P++C  CGK F     L  H+ TH
Sbjct: 2  SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 57.5 bits (140), Expect = 3e-13
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          EKP+ C +C   F    +L +H RIH+G  P 
Sbjct: 9  EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.0 bits (131), Expect = 6e-12
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
                GEKP+ C++CG RF     L  H   H
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 3e-13
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          +K   C+ C K F+ SSSL  H+RIH+GEKP   
Sbjct: 10 KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-11
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G+K  +C  C K FT SS+L  H+  H
Sbjct: 2  SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 3e-13
 Identities = 19/34 (55%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C VC K FS  +SL  H+R+HSGEKP   
Sbjct: 10 EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 7e-11
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C VC K F+  ++L  H+  H
Sbjct: 2  SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 3e-13
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
           KP++C+ C K FS  SSL TH+ IH+GEKP   
Sbjct: 10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 4e-11
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G KP+ C  CGK F+  S+L  H++ H
Sbjct: 2  SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 57.6 bits (140), Expect = 3e-13
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EK   C  C   FS +SSL  H+ +H GEKP   
Sbjct: 10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 3e-10
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +      GEK  +C+ C   F+ +S+L  H+  H
Sbjct: 2  SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.5 bits (140), Expect = 3e-13
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F+T S+L  H+R H+GE     
Sbjct: 10 EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  C K F   SNL  H+ TH
Sbjct: 2  SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 4e-13
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ CS C K F   + LN HRRIH+G +P   
Sbjct: 10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP++C  CGK F   ++L  HR  H
Sbjct: 2  SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 4e-13
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F   SSL  H+  HSGEKP   
Sbjct: 10 EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F A S+L  H+ TH
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 4e-13
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C VC K F  SS L  H  +HSGE+P   
Sbjct: 10 EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-12
 Identities = 16/33 (48%), Positives = 20/33 (60%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
               +GEKP++CQVCGK F  SS+L  H   H
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 4e-13
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E+P  C+ C KGF   S L  H R+HS EK    
Sbjct: 10 ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 7e-10
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGE+P +C  CGK F   S+L  H   H
Sbjct: 2  SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 5e-13
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EK + C  C K FS +  L  H R+HSGEKP   
Sbjct: 10 EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-11
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEK + C+ CGK F+ +  L  H   H
Sbjct: 2  SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 5e-13
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C K F+  ++L  H+RIH+GEKP   
Sbjct: 10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 9e-11
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F   +NL  H+  H
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 5e-13
 Identities = 14/34 (41%), Positives = 14/34 (41%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C  C   FS S SL  H R H    P   
Sbjct: 10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-12
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP QC+ CG  F+ S +L+ H  +H
Sbjct: 2  SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 6e-13
 Identities = 19/34 (55%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP++C+ C K F   S LN HRRIH+GEKP   
Sbjct: 10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP+ C  CGK F   S+L  HR  H
Sbjct: 2  SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 6e-13
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C K F   S L  H+RIH+GEKP   
Sbjct: 10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 5e-11
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP+ C+ CGK F   S L  H+  H
Sbjct: 2  SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 6e-13
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          +KP+ C  C K F     LN H+R+H+GE+    
Sbjct: 10 KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-10
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SG+KP++C+ C K F    +L  H+  H
Sbjct: 2  SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 6e-13
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C  C K F+ +S L++H+R+H+GEKP   
Sbjct: 10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 3e-12
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP +C+ CGKRFT +S L+ H+  H
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 6e-13
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E+ + CS C K F   S+L+ H+RIH GEKP   
Sbjct: 10 ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 6e-11
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GE+ ++C  CGK F   S L  H+  H
Sbjct: 2  SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 7e-13
 Identities = 18/34 (52%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKPH C  C K FS +S L  H+RIH+GE P   
Sbjct: 10 EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 6e-11
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKPH+C+ CGK F+ +S L  H+  H
Sbjct: 2  SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.7 bits (138), Expect = 7e-13
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E P+ C  C K FS    L +H++ HSG+     
Sbjct: 10 ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.6 bits (117), Expect = 1e-09
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GE P++C  CGK F+    L  H+ TH
Sbjct: 2  SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 7e-13
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K FS  S L+ H+R H+GEKP   
Sbjct: 10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP+ C  CGK F+  S L  H+ TH
Sbjct: 2  SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 8e-13
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
            P+ CS C K FS    L  H+R+H+ EKP   
Sbjct: 10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G  P++C  C K F+    L  H+  H
Sbjct: 2  SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 8e-13
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F   S+L TH+ IH+GEKP   
Sbjct: 10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F A SNL  H++ H
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 9e-13
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E P+ C  C K FS    L +H+R H+GEKP   
Sbjct: 10 ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GE P++C  CGK F+    L  H+ TH
Sbjct: 2  SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 1e-12
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
           K   C+ C K F+  S+L+ H++IH+GEKP   
Sbjct: 10 GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 7e-11
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G K  +C  CGK FT  S L  H+  H
Sbjct: 2  SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 1e-12
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C  C K F+ +S L++H+R+H+GEKP   
Sbjct: 10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 5e-12
 Identities = 17/34 (50%), Positives = 23/34 (67%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP QC+ CGKRFT +S+L+ H+  H
Sbjct: 2  SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 1e-12
 Identities = 17/34 (50%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F  +S L+ H+RIH+GEKP   
Sbjct: 10 EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 7e-11
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F  +S L  H+  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 1e-12
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C VCSK F+  + L  H++ H+GEKP   
Sbjct: 10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-11
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C+VC K FT  ++L  H+ TH
Sbjct: 2  SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-12
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K FS  SSL TH+ IH+G+KP   
Sbjct: 10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-10
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F+  S+L  H+  H
Sbjct: 2  SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 56.0 bits (136), Expect = 1e-12
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          +KP  C+ C K F    +L TH+RIH+GEK    
Sbjct: 10 QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 52.2 bits (126), Expect = 4e-11
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G+KP +C  CGK F A  NL  H+  H
Sbjct: 2  SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 56.0 bits (136), Expect = 1e-12
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EK + C+ C K FS +S L+ H++IH+GEKP   
Sbjct: 10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 50.6 bits (122), Expect = 2e-10
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEK ++C  CGK F+ +S L  H+  H
Sbjct: 2  SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-12
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C K F  +SS   H+R+H+G++P   
Sbjct: 10 EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 6e-11
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F  +S+   H+  H
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-12
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K FS +S L  H+RIH+GEKP   
Sbjct: 10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-10
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F+ +S L  H+  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 56.0 bits (136), Expect = 1e-12
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C K FS ++ L  H+R+H+GEKP   
Sbjct: 10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 50.6 bits (122), Expect = 2e-10
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C+ CGK F+ +++L  H+  H
Sbjct: 2  SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 2e-12
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F+ +S L  H RIH+GEKP   
Sbjct: 10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-11
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP++C  CGK FT +S+L  H   H
Sbjct: 2  SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-12
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E+PH C+ C K F  S+ L  H+RIH+GEKP   
Sbjct: 10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 4e-11
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GE+PH+C  CGK F  S++L  H+  H
Sbjct: 2  SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-12
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C  C K F  +  L +H RIH+GEKP   
Sbjct: 10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     SGEKP +C+ CGK F  + +L  H   H
Sbjct: 2  SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-12
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C  C K F  +S L  H+ IH+GEKP   
Sbjct: 10 EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 4e-11
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK F  +S+L  H++ H
Sbjct: 2  SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-12
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F+ +S L  HR IH+GEKP   
Sbjct: 10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK FT +S+L  HR  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 55.7 bits (135), Expect = 2e-12
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          E P++C  C K F+   SL  H+R  S   P 
Sbjct: 9  ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 48.8 bits (117), Expect = 7e-10
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
                GE P+ C  CGK FT   +L  H+ + 
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-12
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
           KP+ C+ C K FS +S L  H+R+H+GEKP   
Sbjct: 10 GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 5e-11
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G KP+QC  CGK F+ +S L  H+  H
Sbjct: 2  SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-12
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F+ +S L  H+RIH+G KP   
Sbjct: 10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 5e-11
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK FT +S+L  H+  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 3e-12
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          E+P+ C+ C K F   S L  H + H  EK    
Sbjct: 10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 6e-10
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
               SGE+P+ C  CGK F   S+L  H   H
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 3e-12
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F+ +S L  HR IH+GEKP   
Sbjct: 10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-11
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK FT +S+L  HR  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 3e-12
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          +KP+ C+ C K F+ +S L  HR IH+GEKP   
Sbjct: 10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-11
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +G+KP++C  CGK FT +S+L  HR  H
Sbjct: 2  SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 3e-12
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP  C  C K ++    L  H+R+H+GEKP   
Sbjct: 10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-10
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP +C  CGK +    +L  H+  H
Sbjct: 2  SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 54.9 bits (132), Expect = 4e-12
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 10 SEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC 47
          + K   C +C K F     LN H+  HSGEKP+     
Sbjct: 9  TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.3 bits (94), Expect = 2e-06
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
                K   C++CGK F    +L  H+++H
Sbjct: 5  SSGRTRKQVACEICGKIFRDVYHLNRHKLSH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 4e-12
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C K F+ +S L  HRR+H+G KP   
Sbjct: 10 EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 4e-11
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GEKP++C  CGK FT +S+L  HR  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 5e-12
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EK H C  C K F   S+L  H+R+H GEK    
Sbjct: 10 EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.0 bits (128), Expect = 2e-11
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
               SGEK H C  CGK F   S L  H+  H
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.1 bits (131), Expect = 6e-12
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          EKP+ C  C   F   + L  H  IH+G  P 
Sbjct: 9  EKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.3 bits (129), Expect = 1e-11
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
                GEKP++C+ CG RF   ++L  H + H
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 53.8 bits (130), Expect = 8e-12
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQ 45
          EKP  C+   C   FS S  L+ HRR HSG KP    
Sbjct: 10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 51.9 bits (125), Expect = 5e-11
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 31 THRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH 64
          +     +GEKP  C    CG RF+ S  L  HR +H
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.0 bits (128), Expect = 2e-11
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
                GEKP++C  CGK F+   +L  H   H
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.0 bits (128), Expect = 2e-11
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          EKP+ C  C K FS   SL  H R+H+G  P 
Sbjct: 9  EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 53.0 bits (128), Expect = 2e-11
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTH-RRIHSGEKPHQC 44
          +KP+ C  C K F  ++SL  H R  H+GEKP   
Sbjct: 10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 52.2 bits (126), Expect = 4e-11
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYH-RMTH 64
          +     +G+KP++C  CGK F  +++L  H R  H
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 52.6 bits (127), Expect = 2e-11
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          ++ + C  C K F    SL  H RIH+G  P 
Sbjct: 8  QRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 42.6 bits (101), Expect = 2e-07
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             SG++ ++CQ CGK F    +L  H   H
Sbjct: 3  SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 52.4 bits (125), Expect = 5e-11
 Identities = 14/51 (27%), Positives = 20/51 (39%)

Query: 14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          ++C  C       S L  H R H+  +P+ C  C   F    NL  H  + 
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.3 bits (91), Expect = 7e-06
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          +R     +P+ C+ C+  F T  +L  H +  +  K
Sbjct: 21 IRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 49.6 bits (119), Expect = 3e-10
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV 67
            R  +G KP QC  C + F+ S +L  HR  H+ V
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 38.1 bits (89), Expect = 1e-05
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIH 36
           KP  C  C + FS S  L  HR+ H
Sbjct: 9  IKPFQCPDCDRSFSRSDHLALHRKRH 34

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.9 bits (117), Expect = 8e-10
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          EKP+ C+ C + FS ++ L  H+++H+ +     
Sbjct: 8  EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.5 bits (103), Expect = 1e-07
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
             SGEKP+ C  C + F+ ++ L  H+  H
Sbjct: 3  SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.7 bits (117), Expect = 9e-10
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
               +  K + C  CGK FT   +L  H+  H
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.7 bits (104), Expect = 7e-08
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
           K + C+ C K F+    L  H++IH+ +     
Sbjct: 10 SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.8 bits (113), Expect = 9e-09
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 24 STSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH-RMTHIKVNDDFKEILNLEPVSG 82
          S+ SS   +  I +G    +C+ C   +     L  H   T    +D+ +   N      
Sbjct: 2  SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 83 SNDEKNL 89
             +++L
Sbjct: 62 KPRKRSL 68

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.4 bits (91), Expect = 2e-05
 Identities = 8/48 (16%), Positives = 13/48 (27%), Gaps = 2/48 (4%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRI--HSGEKPHQCQVCGKRFTASSN 56
               C  CS  + T   L  H     H  +  H+      +  +   
Sbjct: 17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.4 bits (91), Expect = 2e-05
 Identities = 9/50 (18%), Positives = 15/50 (30%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
           +    +          SL         +K  +C  CG  F +  +L  H
Sbjct: 50 HETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 46.6 bits (110), Expect = 1e-08
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 25 TSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHR 61
          +S S    ++IH G++  +C  CG  F   S L   +
Sbjct: 2  SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK 38

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 45.0 bits (106), Expect = 6e-08
 Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 7/59 (11%)

Query: 6  RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          ++ + ++   CS C   F   S+        S  K   C+ C K     + L       
Sbjct: 11 KIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.8 bits (95), Expect = 2e-06
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 8  LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          L   K  +C  C K     ++LN      SG+K  
Sbjct: 34 LSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 46.5 bits (110), Expect = 2e-08
 Identities = 17/63 (26%), Positives = 19/63 (30%), Gaps = 9/63 (14%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTH-RRIHSGEKPHQ--------CQVCGKRFTASSNLYYHR 61
          +       C + FST   L TH    H G             C   GK F A   L  H 
Sbjct: 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82

Query: 62 MTH 64
            H
Sbjct: 83 RVH 85

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.8 bits (103), Expect = 3e-07
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 16 CSVCSKGFSTSSSLNTHRRIHSGEKPHQC 44
          C    K F     L  H R+H+GEK    
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 47.2 bits (111), Expect = 2e-08
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 1   MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH 60
            +Y L    +    VC +C   FS+S SL  H R    E    C VC K FT++ +   H
Sbjct: 62  YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.3 bits (102), Expect = 1e-07
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          E P  CS C + F+  + L  H R H+ +   
Sbjct: 10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.4 bits (97), Expect = 7e-07
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +     +GE P +C  C + FT  + L  H  TH
Sbjct: 2  SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 40.7 bits (96), Expect = 1e-06
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 12 KPHVCSV--CSKGFSTSSSLNTHRRIHSGEK 40
          +P +C+   C K F+ S  L  H+R H+GEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 33.4 bits (77), Expect = 8e-04
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 40 KPHQCQV--CGKRFTASSNLYYHRMTH 64
          +P  C    CGKRFT S  L  H+ TH
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 44.1 bits (103), Expect = 1e-06
 Identities = 10/53 (18%), Positives = 16/53 (30%)

Query: 12  KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
              +    S   S   +        S    +QC VC     +  +L  H  +H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.2 bits (93), Expect = 3e-05
 Identities = 8/28 (28%), Positives = 11/28 (39%)

Query: 10  SEKPHVCSVCSKGFSTSSSLNTHRRIHS 37
           S   + C VCS    +   L+ H   H 
Sbjct: 177 SGHGYQCHVCSAVLFSPLDLDAHVASHG 204

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 39.6 bits (93), Expect = 3e-06
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEK 40
          +K H+C +  C K +  +S L  H R H+GE+
Sbjct: 6  KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 39.2 bits (92), Expect = 3e-06
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          +  VC VC++ F+    L  H R H+ EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 39.0 bits (90), Expect = 6e-06
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          KP+VC  C + F+   +L  H RIH+GEK
Sbjct: 2  KPYVCIHCQRQFADPGALQRHVRIHTGEK 30

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 37.6 bits (86), Expect = 2e-05
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 36 HSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           SGEKP+ C VCG RF     + YH  +H
Sbjct: 5  SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 37.6 bits (86), Expect = 7e-05
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 15 VCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMT 63
          VC  CS  F +      H       K   C  C + F +S +++ H++ 
Sbjct: 44 VCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVE 91

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens} Length = 29

 Score = 35.1 bits (80), Expect = 2e-04
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          KP  C +C K F+ +SSL  H R H+GEK
Sbjct: 1  KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 96

 Score = 36.0 bits (82), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 5  LRVLISEKPHV-CSVCSK-GFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM 62
            + I +K  V C  C   G  T   L  H      ++   C  CGK+  + + + YH M
Sbjct: 25 WYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVM 83

Query: 63 T 63
           
Sbjct: 84 A 84

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus} Length = 28

 Score = 33.6 bits (76), Expect = 5e-04
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSG 38
          +P+ CSVC K FS    + TH R+H+G
Sbjct: 2  RPYSCSVCGKRFSLKHQMETHYRVHTG 28

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 98

 Score = 34.9 bits (79), Expect = 6e-04
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 9  ISEKPHV-CSVCSK-GFSTSSSLNTH-RRIHSGEKPHQCQVCGKRFTASSNLYYHRMT-- 63
          I E+    C  C+     T   L  H       +   +CQ C K+F + + L YH M   
Sbjct: 19 IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH 78

Query: 64 -HIKVNDDFKEILNLEPVSG 82
               + +  E     P SG
Sbjct: 79 SAKPSDAEASEGGESGPSSG 98

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	99
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.84
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.84
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.83
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.81
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.81
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.8
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.8
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.8
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.8
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.79
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.79
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.79
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.78
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.78
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.77
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.77
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.76
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.75
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.75
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.75
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.74
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.74
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.74
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.74
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.72
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.72
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.71
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.71
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.71
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.71
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.69
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.68
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.68
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.68
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.65
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.64
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.63
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.6
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.6
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.6
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.6
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.6
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.59
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.59
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.59
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.59
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.59
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.59
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.59
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.58
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.58
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.58
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.58
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.58
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.58
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.58
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.57
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.57
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.57
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.57
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.57
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.57
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.57
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.57
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.56
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.56
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.56
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.55
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.54
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.54
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.54
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.52
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.52
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.52
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.51
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.5
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.5
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.5
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.5
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.5
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.49
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.49
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.49
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.49
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.47
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.46
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.46
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.45
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.44
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.44
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.44
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.43
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.43
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.43
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.43
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.42
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.42
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.42
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.42
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.41
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.41
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.41
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.4
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.39
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.39
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.39
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.37
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.37
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.37
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.37
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.36
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.36
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.36
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.36
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.35
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.35
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.34
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.34
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.34
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.33
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.33
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.33
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.32
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.31
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.31
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.3
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.27
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.26
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.26
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.25
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.24
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.23
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.22
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.2
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.19
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.18
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.17
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.16
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.16
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.15
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.14
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.13
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.13
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.13
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.12
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.1
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.08
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.08
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.08
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.06
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.99
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.97
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.97
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.96
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.92
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.9
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.89
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.87
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.87
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.86
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.84
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.81
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.79
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.78
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.77
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.77
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.75
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.72
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.72
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.71
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.71
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.7
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.7
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.69
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.68
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.67
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.66
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.11
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.66
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.63
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.63
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.06
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.63
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.62
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.61
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.61
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.59
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.59
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.59
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.59
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.58
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.58
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.57
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.56
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.55
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.54
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.53
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.5
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.87
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.48
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.85
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.85
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.34
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.68
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.25
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.93
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.43
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.29
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.92
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.36
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.33
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.55
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	94.63
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.77
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.56
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.64
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	92.06
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	91.93
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	91.4
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	90.37
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	90.12
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	89.74
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	89.45
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	89.32
3jyw_9	72	60S ribosomal protein L43; eukaryotic ribosome, RA	86.42
1vq8_Z	83	50S ribosomal protein L37AE; ribosome 50S, protein	85.88
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	85.46
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	85.23
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	84.92
3cc2_Z	116	50S ribosomal protein L37AE, 50S ribosomal protein	84.35
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	83.74
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	82.58
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	82.43
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	81.07

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=4.2e-25  Score=121.95  Aligned_cols=92  Identities=18%  Similarity=0.201  Sum_probs=84.7

Q ss_pred             eehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccC
Q psy16685          2 IYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVS   81 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~   81 (99)
                      ..|.++|.|+++|.|++|++.|.....|..|+++|++++||.|..|++.|.....|..|+++|++++|+.|..|+..+..
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcchhhhhhhh
Q psy16685         82 GSNDEKNLNKFN   93 (99)
Q Consensus        82 ~~~~~~~~~~~~   93 (99)
                      ...+..|+...+
T Consensus        91 ~~~L~~H~~~hh  102 (133)
T 2lt7_A           91 YQFMSSHIKSVH  102 (133)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHhHHhc
Confidence            999998887665

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.87  E-value=1.4e-22  Score=97.66  Aligned_cols=59  Identities=37%  Similarity=0.740  Sum_probs=56.2

Q ss_pred             CCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCC
Q psy16685         10 SEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        10 ~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      .|+||.|.+|++.|.....|..|+++|++++||.|..|++.|...+.|..|+++|+++.
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            47999999999999999999999999999999999999999999999999999999864

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=4.1e-22  Score=109.96  Aligned_cols=79  Identities=22%  Similarity=0.250  Sum_probs=71.4

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCc------chhhh
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVND------DFKEI   74 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------~~~~~   74 (99)
                      |.+|+++|++++||.|+.|++.|.....|..|+++|++++||.|+.|++.|.....|..|+++|++++|      +.|..
T Consensus        38 L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~  117 (133)
T 2lt7_A           38 LRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHP  117 (133)
T ss_dssp             HHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECC
T ss_pred             HHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCC
Confidence            568999999999999999999999999999999999999999999999999999999999999987654      56666


Q ss_pred             ccccc
Q psy16685         75 LNLEP   79 (99)
Q Consensus        75 ~~~~~   79 (99)
                      |+..+
T Consensus       118 C~k~~  122 (133)
T 2lt7_A          118 CRSLQ  122 (133)
T ss_dssp             CCSSC
T ss_pred             CCchh
Confidence            66543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=2.1e-21  Score=99.39  Aligned_cols=79  Identities=24%  Similarity=0.278  Sum_probs=73.2

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCC----CceecccccccccCcchHHHHHHhccCCCcchhhhcc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE----KPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILN   76 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~   76 (99)
                      |.+|+++|++++||.|..|++.|.....|..|+..+...    ++|.|..|++.|.....|..|+++|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            578999999999999999999999999999999877665    7899999999999999999999999999999999887


Q ss_pred             ccc
Q psy16685         77 LEP   79 (99)
Q Consensus        77 ~~~   79 (99)
                      ..+
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=7.4e-22  Score=107.08  Aligned_cols=94  Identities=19%  Similarity=0.272  Sum_probs=87.1

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhh---cCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRI---HSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNL   77 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~---~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~   77 (99)
                      |.+|+++|.+++||.|..|++.|.....|..|+..   +.+.++|.|..|++.|.....|..|+++|.+++++.|..|+.
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  102 (124)
T 2dlq_A           23 LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ  102 (124)
T ss_dssp             HHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCC
T ss_pred             HHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccc
Confidence            46799999999999999999999999999999885   577899999999999999999999999999999999999999


Q ss_pred             cccCCCcchhhhhhhhh
Q psy16685         78 EPVSGSNDEKNLNKFNI   94 (99)
Q Consensus        78 ~~~~~~~~~~~~~~~~~   94 (99)
                      .+.....+..|+...+.
T Consensus       103 ~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A          103 QFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             EESSHHHHHHHHHHTSS
T ss_pred             hhCCHHHHHHHHHHHCC
Confidence            99999999999876553

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=2.3e-22  Score=108.12  Aligned_cols=94  Identities=14%  Similarity=0.018  Sum_probs=86.1

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhh--cCCCCce-ecccccccc--cCcchHHHHHHhccCCCcchhhhc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRI--HSGEKPH-QCQVCGKRF--TASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~--~~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |.+|+++|++++||.|..|++.|.....|..|++.  +.+.+++ .|..|++.|  .....|..|+++|.+++||.|..|
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCC
Confidence            67899999999999999999999999999999998  7766665 499999998  899999999999999999999999


Q ss_pred             cccccCCCcchhhhhhhhh
Q psy16685         76 NLEPVSGSNDEKNLNKFNI   94 (99)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~   94 (99)
                      +..+.....+..|+...+.
T Consensus        87 ~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTT
T ss_pred             CCccCCHHHHHHHHHHhCC
Confidence            9999999999999876654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.83  E-value=8.5e-22  Score=106.23  Aligned_cols=90  Identities=29%  Similarity=0.430  Sum_probs=82.7

Q ss_pred             CeehhhhhcCCCCeecc--cCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh--hhcc
Q psy16685          1 MIYILRVLISEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK--EILN   76 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~--~~~~   76 (99)
                      |..|+++|.+++||.|.  .|++.|.....|..|++.|.+.++|.|..|++.|.....|..|+++|.+++++.|  ..|+
T Consensus        24 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~  103 (119)
T 2jp9_A           24 LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQ  103 (119)
T ss_dssp             HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCC
T ss_pred             HHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCc
Confidence            46799999999999999  7999999999999999999999999999999999999999999999999999999  7899


Q ss_pred             ccccCCCcchhhhh
Q psy16685         77 LEPVSGSNDEKNLN   90 (99)
Q Consensus        77 ~~~~~~~~~~~~~~   90 (99)
                      ..+.....+..|+.
T Consensus       104 ~~f~~~~~L~~H~~  117 (119)
T 2jp9_A          104 KKFARSDELVRHHN  117 (119)
T ss_dssp             CEESSHHHHHHHHH
T ss_pred             cccCCHHHHHHHHh
Confidence            99888777777764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.83  E-value=1.2e-21  Score=113.31  Aligned_cols=92  Identities=29%  Similarity=0.417  Sum_probs=68.0

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhcccccc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPV   80 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~   80 (99)
                      |..|+++|.++++|.|..|++.|.....|..|+++|.+.+||.|+.|++.|.....|..|+++|.+++++.|..|+..+.
T Consensus        93 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~  172 (190)
T 2i13_A           93 LRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFS  172 (190)
T ss_dssp             HHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             HHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccC
Confidence            34577777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CCCcchhhhhhh
Q psy16685         81 SGSNDEKNLNKF   92 (99)
Q Consensus        81 ~~~~~~~~~~~~   92 (99)
                      ....+..|+...
T Consensus       173 ~~~~L~~H~~~H  184 (190)
T 2i13_A          173 RRDALNVHQRTH  184 (190)
T ss_dssp             SHHHHHHHHTTC
T ss_pred             CHHHHHHHHHhc
Confidence            777777666543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=1.1e-20  Score=102.67  Aligned_cols=93  Identities=32%  Similarity=0.466  Sum_probs=85.5

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc--ccccccCcchHHHHHHhccCCCcchhh--hcc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKVNDDFKE--ILN   76 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~--~~~   76 (99)
                      |..|+++| +.++|.|..|++.|.....|..|+.+|.+.++|.|..  |++.|.....|..|+++|.+++++.|.  .|+
T Consensus        23 l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~  101 (124)
T 1ubd_C           23 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN  101 (124)
T ss_dssp             HHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCC
T ss_pred             HHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCC
Confidence            46799998 8899999999999999999999999999999999975  999999999999999999999999995  699


Q ss_pred             ccccCCCcchhhhhhhhh
Q psy16685         77 LEPVSGSNDEKNLNKFNI   94 (99)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~   94 (99)
                      ..+.+...+..|+.....
T Consensus       102 ~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C          102 KKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             CCCSSTTTTHHHHHHHC-
T ss_pred             CccCCHHHHHHHHHHHcc
Confidence            999999999999876543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.81  E-value=6.6e-21  Score=100.09  Aligned_cols=72  Identities=22%  Similarity=0.367  Sum_probs=67.6

Q ss_pred             CeehhhhhcCCCCeecccCcCcCC-ChHHHHHHhhhcCC-CCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFS-TSSSLNTHRRIHSG-EKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~-~~~~l~~h~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      +..|+++|.++++|.|..|++.|. ....|..|+++|.+ +++|.|..|++.|.....|..|+++|++++|...
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            457999999999999999999999 99999999999998 8999999999999999999999999999988553

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.5e-20  Score=105.51  Aligned_cols=92  Identities=30%  Similarity=0.511  Sum_probs=74.9

Q ss_pred             CeehhhhhcCCCCeeccc--CcCcCCChHHHHHHhhhcCCCCceeccc--ccccccCcchHHHHH-HhccCCCcchhhh-
Q psy16685          1 MIYILRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHR-MTHIKVNDDFKEI-   74 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~~-   74 (99)
                      |.+|+++|.+++||.|..  |++.|.....|..|++.|.+.++|.|+.  |++.|.+...|..|+ +.|.+++++.|.. 
T Consensus        55 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~  134 (155)
T 2gli_A           55 LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLP  134 (155)
T ss_dssp             HHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCST
T ss_pred             HHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCC
Confidence            456888888888888874  8888888888888888888888888887  888888888888887 6788888888877 


Q ss_pred             -ccccccCCCcchhhhhhh
Q psy16685         75 -LNLEPVSGSNDEKNLNKF   92 (99)
Q Consensus        75 -~~~~~~~~~~~~~~~~~~   92 (99)
                       |+..+.....+..|+...
T Consensus       135 ~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A          135 GCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             TTCCEESSHHHHHHHHHHS
T ss_pred             CCccccCCHHHHHHHHHhh
Confidence             888888777777776543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.9e-20  Score=99.15  Aligned_cols=88  Identities=23%  Similarity=0.345  Sum_probs=82.0

Q ss_pred             hhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcc
Q psy16685          6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSND   85 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~   85 (99)
                      ..|+++++|.| .|++.|.....|..|++.|.+.++|.|..|++.|.....|..|+++|.+++++.|..|+..+.....+
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            35789999999 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhh
Q psy16685         86 EKNLNKFNI   94 (99)
Q Consensus        86 ~~~~~~~~~   94 (99)
                      ..|+...+.
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            998876553

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.80  E-value=1.3e-20  Score=108.91  Aligned_cols=90  Identities=30%  Similarity=0.430  Sum_probs=63.1

Q ss_pred             eehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccC
Q psy16685          2 IYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVS   81 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~   81 (99)
                      .+|+++|.++++|.|+.|++.|.....|..|+..|.+.++|.|..|++.|.....|..|+++|.+++++.|..|+..+..
T Consensus        66 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  145 (190)
T 2i13_A           66 TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSR  145 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             HHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCC
Confidence            45666677777777777777777777777777777666777777777777777777777777777777777777777666


Q ss_pred             CCcchhhhhh
Q psy16685         82 GSNDEKNLNK   91 (99)
Q Consensus        82 ~~~~~~~~~~   91 (99)
                      ...+..|+..
T Consensus       146 ~~~L~~H~~~  155 (190)
T 2i13_A          146 EDNLHTHQRT  155 (190)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            6666666544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=6e-20  Score=92.39  Aligned_cols=68  Identities=37%  Similarity=0.589  Sum_probs=63.9

Q ss_pred             hhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685          5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus         5 ~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      ...+.+++||.|..|++.|.....|..|+++|.+.+||.|..|++.|.....|..|+++|++++||.|
T Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           10 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34567889999999999999999999999999999999999999999999999999999999999875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=3.9e-20  Score=96.42  Aligned_cols=86  Identities=31%  Similarity=0.416  Sum_probs=79.4

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchh
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEK   87 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~   87 (99)
                      +.+++||.|..|++.|.....|..|++.|.+.++|.|..|++.|.....|..|+++|.+++++.|..|+..+.....+..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999888888


Q ss_pred             hhhhhh
Q psy16685         88 NLNKFN   93 (99)
Q Consensus        88 ~~~~~~   93 (99)
                      |+....
T Consensus        83 H~~~h~   88 (96)
T 2dmd_A           83 HLRSHT   88 (96)
T ss_dssp             HHTTCC
T ss_pred             HHHHhc
Confidence            876543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.80  E-value=6e-20  Score=97.28  Aligned_cols=84  Identities=24%  Similarity=0.381  Sum_probs=72.0

Q ss_pred             cCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhh
Q psy16685          9 ISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKN   88 (99)
Q Consensus         9 ~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~   88 (99)
                      ..+++|.|..|++.|.....|..|++.|.+.++|.|..|++.|.....|..|+++|.+++++.|..|+..+.....+..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            45678889999999998888989988888888899999999999888999998889888899999998888888888877


Q ss_pred             hhhh
Q psy16685         89 LNKF   92 (99)
Q Consensus        89 ~~~~   92 (99)
                      +...
T Consensus        93 ~~~H   96 (106)
T 2ee8_A           93 KTLH   96 (106)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            7544

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=5.6e-20  Score=95.65  Aligned_cols=85  Identities=26%  Similarity=0.430  Sum_probs=79.5

Q ss_pred             cCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCC--CcchhhhccccccCCCcch
Q psy16685          9 ISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV--NDDFKEILNLEPVSGSNDE   86 (99)
Q Consensus         9 ~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~~~~~~~~~~~~~~~~   86 (99)
                      .++++|.|..|++.|.....|..|+++|.+.++|.|..|++.|.....|..|++.|.++  +++.|..|+..+.....+.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            57889999999999999999999999999999999999999999999999999999987  9999999999999999999


Q ss_pred             hhhhhhh
Q psy16685         87 KNLNKFN   93 (99)
Q Consensus        87 ~~~~~~~   93 (99)
                      .|+...+
T Consensus        83 ~H~~~~H   89 (95)
T 2yt9_A           83 GHIKQVH   89 (95)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHhc
Confidence            9886554

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.79  E-value=3.8e-20  Score=95.38  Aligned_cols=84  Identities=31%  Similarity=0.528  Sum_probs=74.0

Q ss_pred             CCCCeecc--cCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchh
Q psy16685         10 SEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEK   87 (99)
Q Consensus        10 ~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~   87 (99)
                      +++||.|.  .|++.|.....|..|+++|.+.++|.|..|++.|.....|..|+++|.+++++.|..|+..+.....+..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            46789998  6999999999999999999999999999999999999999999999999999999999999988888888


Q ss_pred             hhhhhh
Q psy16685         88 NLNKFN   93 (99)
Q Consensus        88 ~~~~~~   93 (99)
                      |+....
T Consensus        81 H~~~H~   86 (90)
T 1a1h_A           81 HTKIHL   86 (90)
T ss_dssp             HHGGGG
T ss_pred             HHHHhc
Confidence            876543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.79  E-value=1.8e-19  Score=90.01  Aligned_cols=64  Identities=33%  Similarity=0.684  Sum_probs=61.0

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcc
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      .+.++++|.|..|++.|.....|..|+++|.+.++|.|..|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4678899999999999999999999999999999999999999999999999999999999885

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.2e-19  Score=90.28  Aligned_cols=66  Identities=23%  Similarity=0.343  Sum_probs=60.6

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhh-hcCCC-CceecccccccccCcchHHHHHHhccC
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRR-IHSGE-KPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~-~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      |.+|+++|++++||.|..|++.|.....|..|+. .|.+. ++|.|..|++.|.....|..|++.+++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999987 67764 899999999999999999999998553

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.4e-19  Score=89.11  Aligned_cols=66  Identities=41%  Similarity=0.654  Sum_probs=62.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCC
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      .+.++|++++||.|..|++.|.....|..|+++|.+.+||.|..|++.|.....|..|+++|+++.
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            356789999999999999999999999999999999999999999999999999999999998754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.78  E-value=1e-19  Score=93.76  Aligned_cols=69  Identities=36%  Similarity=0.784  Sum_probs=63.7

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      |.+|+++|.++++|.|..|++.|.....|..|+.+|.+.++|.|..|++.|.....|..|+++|+++++
T Consensus        22 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           22 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             HHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            467999999999999999999999999999999999999999999999999999999999999998763

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.7e-19  Score=87.57  Aligned_cols=65  Identities=29%  Similarity=0.427  Sum_probs=61.3

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcch
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDF   71 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   71 (99)
                      .|++++||.|..|++.|.....|..|+++|.+.++|.|..|++.|.....|..|+++|++++|..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            47889999999999999999999999999999999999999999999999999999999988753

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.7e-19  Score=93.19  Aligned_cols=70  Identities=36%  Similarity=0.529  Sum_probs=66.1

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      |.+|+++|.++++|.|..|++.|.....|..|+++|.+.++|.|..|++.|.....|..|+++|+++++.
T Consensus        24 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           24 LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             HHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            4679999999999999999999999999999999999999999999999999999999999999987653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=5.7e-20  Score=97.66  Aligned_cols=88  Identities=13%  Similarity=0.085  Sum_probs=80.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCC
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSG   82 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~   82 (99)
                      .++++|++++||.|..|++.|.....|..|+++|  .++|.|..|++.|.....|..|+. |.+++++.|..|+..+...
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            4678899999999999999999999999999998  479999999999999999999996 9999999999999999999


Q ss_pred             Ccchhhhhhhh
Q psy16685         83 SNDEKNLNKFN   93 (99)
Q Consensus        83 ~~~~~~~~~~~   93 (99)
                      ..+..|+...+
T Consensus        83 ~~L~~H~~~~H   93 (107)
T 1wjp_A           83 FSIWRHQVEVH   93 (107)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHHc
Confidence            99988886444

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.77  E-value=1.5e-19  Score=91.54  Aligned_cols=79  Identities=33%  Similarity=0.512  Sum_probs=69.5

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhh
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNK   91 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (99)
                      ||.|..|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|.+++++.|..|+..+.+...+..|+..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            6889999999999999999999988888999999999999999999999999999999999999888887777777654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.5e-19  Score=94.08  Aligned_cols=70  Identities=14%  Similarity=0.061  Sum_probs=63.8

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhh-hc---CCCCceecccccccccCcchHHHH-HHhccCCCcchhhhccc
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRR-IH---SGEKPHQCQVCGKRFTASSNLYYH-RMTHIKVNDDFKEILNL   77 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~-~~---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~~~~~~~   77 (99)
                      -.|++||.|..|++.|.....|..|++ .|   .+++||.|..|++.|...+.|..| +++|++++||.|..+..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            367899999999999999999999997 58   568999999999999999999999 89999999999987543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=3.8e-19  Score=94.18  Aligned_cols=71  Identities=37%  Similarity=0.700  Sum_probs=67.9

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcch
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDF   71 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   71 (99)
                      |.+|+++|.++++|.|..|++.|.....|..|+++|.+.++|.|..|++.|.....|..|+++|.+++++.
T Consensus        33 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           33 LLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             HHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            46799999999999999999999999999999999999999999999999999999999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.77  E-value=2.3e-19  Score=90.88  Aligned_cols=66  Identities=42%  Similarity=0.758  Sum_probs=62.4

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccC
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      |..|+++|.+++||.|..|++.|.....|..|+..|.++++|.|..|++.|.....|..|+++|+|
T Consensus        17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           17 LSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            467999999999999999999999999999999999999999999999999999999999999874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.76  E-value=5.7e-20  Score=94.63  Aligned_cols=84  Identities=29%  Similarity=0.535  Sum_probs=78.5

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhh
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLN   90 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (99)
                      ++||.|..|++.|.....|..|+++|.+.+||.|..|++.|.....|..|+++|++ .++.|..|+..+.....+..|+.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            57999999999999999999999999999999999999999999999999999885 89999999999999999999998


Q ss_pred             hhhhh
Q psy16685         91 KFNIV   95 (99)
Q Consensus        91 ~~~~~   95 (99)
                      +.+..
T Consensus        80 ~~h~~   84 (88)
T 1llm_C           80 RLKKL   84 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.7e-18  Score=87.25  Aligned_cols=71  Identities=27%  Similarity=0.440  Sum_probs=66.7

Q ss_pred             cCCCCeeccc--CcCcCCChHHHHHHhh-hcCCCCceeccc--ccccccCcchHHHHHHhccCCCcchhhhccccc
Q psy16685          9 ISEKPHVCSV--CSKGFSTSSSLNTHRR-IHSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKVNDDFKEILNLEP   79 (99)
Q Consensus         9 ~~~~~~~C~~--c~~~~~~~~~l~~h~~-~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~   79 (99)
                      +++++|.|..  |++.|.....|..|++ .|.+.++|.|..  |++.|.....|..|+++|++++++.|..|+..+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            5788999987  9999999999999999 799999999998  999999999999999999999999999998764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.75  E-value=3.1e-19  Score=100.20  Aligned_cols=93  Identities=27%  Similarity=0.437  Sum_probs=82.4

Q ss_pred             Ceehhhh-hcCCCC--------eecccCcCcCCChHHHHHHhhhcCCCCceeccc--ccccccCcchHHHHHHhccCCCc
Q psy16685          1 MIYILRV-LISEKP--------HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus         1 l~~h~~~-h~~~~~--------~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      |..|+++ |.+..+        |.|..|++.|.....|..|+++|.+.++|.|..  |++.|.....|..|+++|.++++
T Consensus        41 L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~  120 (155)
T 2rpc_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP  120 (155)
T ss_dssp             HHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS
T ss_pred             HHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            4578887 776655        789999999999999999999999999999988  99999999999999999999999


Q ss_pred             chhhh--ccccccCCCcchhhhhhhh
Q psy16685         70 DFKEI--LNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        70 ~~~~~--~~~~~~~~~~~~~~~~~~~   93 (99)
                      +.|..  |+..+.....+..|+....
T Consensus       121 ~~C~~~~C~k~f~~~~~L~~H~~~H~  146 (155)
T 2rpc_A          121 FKCEFEGCDRRFANSSDRKKHMHVHT  146 (155)
T ss_dssp             BCCSSTTCCCCBSSHHHHHHSSTTTT
T ss_pred             ccCCCCCCCCccCCHHHHHHHHHHhc
Confidence            99997  9999988888888876543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=7.9e-19  Score=91.89  Aligned_cols=68  Identities=18%  Similarity=0.285  Sum_probs=62.3

Q ss_pred             eehhhhhcCCCCeecccCcCcC-CChHHHHHHhhhcCCCCceecccccccccCcchHHHH-HHhccCCCcch
Q psy16685          2 IYILRVLISEKPHVCSVCSKGF-STSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH-RMTHIKVNDDF   71 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~~c~~~~-~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~   71 (99)
                      ..|++.+.+++||.|..|++.| .....|..|+++| +++||.|..|++.|.....|..| +++|++ +|++
T Consensus        23 ~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~-~p~~   92 (96)
T 2ctd_A           23 EQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS-LPSG   92 (96)
T ss_dssp             HHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC-CSSC
T ss_pred             HHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC-CCCC
Confidence            4678889999999999999999 9999999999999 99999999999999999999999 888875 4554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.74  E-value=7.3e-19  Score=101.57  Aligned_cols=89  Identities=20%  Similarity=0.236  Sum_probs=57.9

Q ss_pred             eehhhhhcCCCCeecc--cCcCcCCChHHHHHHh-hhc-CCCCceec--ccccccccCcchHHHHHHhccCCCcchhhh-
Q psy16685          2 IYILRVLISEKPHVCS--VCSKGFSTSSSLNTHR-RIH-SGEKPHQC--QVCGKRFTASSNLYYHRMTHIKVNDDFKEI-   74 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~--~c~~~~~~~~~l~~h~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~-   74 (99)
                      .+|+++|.++++|.|.  .|++.|.....|..|+ ..| .+.++|.|  ..|++.|.....|..|+++|++++|+.|.. 
T Consensus        61 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~  140 (190)
T 1tf6_A           61 TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHE  140 (190)
T ss_dssp             HHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSS
T ss_pred             HHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCC
Confidence            4566666666666666  6666666666666666 444 34556666  667777777777777777777777777755 


Q ss_pred             -ccccccCCCcchhhhh
Q psy16685         75 -LNLEPVSGSNDEKNLN   90 (99)
Q Consensus        75 -~~~~~~~~~~~~~~~~   90 (99)
                       |+..+.....+..|+.
T Consensus       141 ~C~k~F~~~~~L~~H~~  157 (190)
T 1tf6_A          141 GCDKRFSLPSRLKRHEK  157 (190)
T ss_dssp             SCCCBCSSHHHHHHHHT
T ss_pred             CCCchhcCHHHHHHHHH
Confidence             7766666666555554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.4e-18  Score=84.90  Aligned_cols=62  Identities=27%  Similarity=0.348  Sum_probs=57.5

Q ss_pred             hhhhcCCCCeecccCcCcCCChHHHHHHhhh-c-CCCCceecccccccccCcchHHHHHHhccC
Q psy16685          5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRI-H-SGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus         5 ~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~-~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      +++|++++||.|+.|++.|.....|..|+.. | .+.+||.|+.|++.|...+.|..|++.+++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4678999999999999999999999999998 7 588999999999999999999999998875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.74  E-value=5.8e-19  Score=99.05  Aligned_cols=73  Identities=36%  Similarity=0.674  Sum_probs=69.1

Q ss_pred             CeehhhhhcCCCCeeccc--CcCcCCChHHHHHHhhhcCCCCceeccc--ccccccCcchHHHHHHhccCCCcchhh
Q psy16685          1 MIYILRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      |.+|+++|+++++|.|..  |++.|.....|..|+++|++.++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus        78 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           78 LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            467999999999999998  9999999999999999999999999997  999999999999999999999999764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.74  E-value=2.5e-18  Score=88.03  Aligned_cols=64  Identities=27%  Similarity=0.497  Sum_probs=58.3

Q ss_pred             hhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHH-hccCCC
Q psy16685          5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM-THIKVN   68 (99)
Q Consensus         5 ~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~   68 (99)
                      +.++...++|.|++|++.|.....|..|+++|++++||.|..|++.|.....|..|++ .|.+|.
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4566778899999999999999999999999999999999999999999999999975 687764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=4.2e-18  Score=95.42  Aligned_cols=93  Identities=26%  Similarity=0.379  Sum_probs=83.4

Q ss_pred             Ceehhh---hhcCCCCeecccC-----cCcCCChHHHHHHhhhcCCCCceeccc--ccccccCcchHHHHHHhccCCCcc
Q psy16685          1 MIYILR---VLISEKPHVCSVC-----SKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus         1 l~~h~~---~h~~~~~~~C~~c-----~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      |..|++   +|.++++|.|..|     ++.|.....|..|++.|.+.+||.|..  |++.|.....|..|+++|.+++++
T Consensus        19 L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   98 (155)
T 2gli_A           19 LVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY   98 (155)
T ss_dssp             HHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCE
T ss_pred             HHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCe
Confidence            456877   6888999998753     489999999999999999999999985  999999999999999999999999


Q ss_pred             hhhh--ccccccCCCcchhhhhhhh
Q psy16685         71 FKEI--LNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        71 ~~~~--~~~~~~~~~~~~~~~~~~~   93 (99)
                      .|..  |+..+.+...+..|+...+
T Consensus        99 ~C~~~~C~~~f~~~~~L~~H~~~~H  123 (155)
T 2gli_A           99 MCEHEGCSKAFSNASDRAKHQNRTH  123 (155)
T ss_dssp             ECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             eCCCCCCCCccCCHHHHHHHHHHhc
Confidence            9998  9999999999999985444

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.72  E-value=6e-18  Score=80.30  Aligned_cols=57  Identities=37%  Similarity=0.650  Sum_probs=50.7

Q ss_pred             CCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccC
Q psy16685         10 SEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        10 ~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      |++||.|..|++.|.....|..|+++|++++||.|+.|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999999999999999999999998863

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=6.2e-18  Score=85.08  Aligned_cols=67  Identities=27%  Similarity=0.425  Sum_probs=59.8

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhhhcCC---CCceecccccccccCcchHHHHHH-hccCCCcchhh
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRRIHSG---EKPHQCQVCGKRFTASSNLYYHRM-THIKVNDDFKE   73 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~   73 (99)
                      +|++++||.|.+|++.|.....|..|+++|.+   +++|.|..|++.|.....|..|++ .|.++.+....
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            47899999999999999999999999999986   799999999999999999999995 57777665543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.71  E-value=2.8e-18  Score=99.09  Aligned_cols=92  Identities=28%  Similarity=0.356  Sum_probs=81.5

Q ss_pred             CeehhhhhcCCCCeec--ccCcCcCCChHHHHHHhhhcCCCCceecc--cccccccCcchHHHHH-Hhc-cCCCcchh--
Q psy16685          1 MIYILRVLISEKPHVC--SVCSKGFSTSSSLNTHRRIHSGEKPHQCQ--VCGKRFTASSNLYYHR-MTH-IKVNDDFK--   72 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C--~~c~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~~~~~--   72 (99)
                      |..|+++|.+++||.|  ..|++.|.....|..|+++|.+.++|.|.  .|++.|.+...|..|+ +.| .+++++.|  
T Consensus        30 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  109 (190)
T 1tf6_A           30 LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHF  109 (190)
T ss_dssp             HHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECS
T ss_pred             HHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCC
Confidence            4679999999999999  88999999999999999999999999999  8999999999999999 566 47889999  


Q ss_pred             hhccccccCCCcchhhhhhh
Q psy16685         73 EILNLEPVSGSNDEKNLNKF   92 (99)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~   92 (99)
                      ..|+..+.+...+..|+...
T Consensus       110 ~~C~k~f~~~~~L~~H~~~H  129 (190)
T 1tf6_A          110 ENCGKAFKKHNQLKVHQFSH  129 (190)
T ss_dssp             SSSCEECSSHHHHHHHHGGG
T ss_pred             CCCccccCCHHHHHHHHHHh
Confidence            88999988888888887653

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=5.3e-20  Score=91.42  Aligned_cols=68  Identities=16%  Similarity=0.191  Sum_probs=62.6

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |..|+++|.+++||.|..|++.|.....|..       .++|.|..|++.|.....|..|+++|++++++.|..|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            6789999999999999999999998877654       6899999999999999999999999999999998765

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.71  E-value=6.2e-18  Score=90.96  Aligned_cols=85  Identities=27%  Similarity=0.462  Sum_probs=78.9

Q ss_pred             cCCCCeeccc--CcCcCCChHHHHHHhhhcCCCCceecc--cccccccCcchHHHHHHhccCCCcchhhhccccccCCCc
Q psy16685          9 ISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSN   84 (99)
Q Consensus         9 ~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~   84 (99)
                      ++++||.|..  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|.+++++.|..|+..+.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            5788999997  999999999999999999999999999  799999999999999999999999999999999999888


Q ss_pred             chhhhhhhh
Q psy16685         85 DEKNLNKFN   93 (99)
Q Consensus        85 ~~~~~~~~~   93 (99)
                      +..|+....
T Consensus        82 l~~H~~~h~   90 (119)
T 2jp9_A           82 LKTHTRTHT   90 (119)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            888876543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=8.3e-18  Score=87.34  Aligned_cols=68  Identities=32%  Similarity=0.516  Sum_probs=62.7

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCC--CceecccccccccCcchHHHHHH-hccCCC
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE--KPHQCQVCGKRFTASSNLYYHRM-THIKVN   68 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~--~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~   68 (99)
                      |.+|+++|.++++|.|..|++.|.....|..|++.|.+.  ++|.|..|++.|.....|..|++ .|.++.
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           23 LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             HHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCCC
Confidence            467999999999999999999999999999999999987  89999999999999999999986 677653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=3e-18  Score=91.26  Aligned_cols=66  Identities=30%  Similarity=0.558  Sum_probs=63.1

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccC
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      |.+|+++|.++++|.|..|++.|.....|..|+++|.+.++|.|..|++.|.....|..|++.|+.
T Consensus        25 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           25 RDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            467999999999999999999999999999999999999999999999999999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.71  E-value=7.6e-18  Score=91.31  Aligned_cols=70  Identities=40%  Similarity=0.700  Sum_probs=61.6

Q ss_pred             CeehhhhhcCCCCeeccc--CcCcCCChHHHHHHhhhcCCCCceecc--cccccccCcchHHHHHHhccCCCcc
Q psy16685          1 MIYILRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      |..|+++|.++++|.|..  |++.|.....|..|+++|.+.++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        50 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           50 LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            467999999999999986  999999999999999999999999995  5999999999999999999998875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.70  E-value=2.4e-17  Score=78.19  Aligned_cols=56  Identities=25%  Similarity=0.498  Sum_probs=53.8

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      ||.|..|++.|.....|..|+++|.+.+||.|..|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999999999999999999999999999999998875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=1.1e-17  Score=87.57  Aligned_cols=82  Identities=28%  Similarity=0.454  Sum_probs=74.9

Q ss_pred             CCCCeeccc--CcCcCCChHHHHHHhhhcCCCCceecc--cccccccCcchHHHHHHhccCCCcchhhhccccccCCCcc
Q psy16685         10 SEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSND   85 (99)
Q Consensus        10 ~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~   85 (99)
                      ..++|.|..  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|+++|.+++++.|..|+..+.....+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            457899996  999999999999999999999999996  6999999999999999999999999999999999888888


Q ss_pred             hhhhhh
Q psy16685         86 EKNLNK   91 (99)
Q Consensus        86 ~~~~~~   91 (99)
                      ..|+..
T Consensus        92 ~~H~~~   97 (100)
T 2ebt_A           92 ALHMKR   97 (100)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=1.3e-17  Score=85.55  Aligned_cols=81  Identities=27%  Similarity=0.457  Sum_probs=73.9

Q ss_pred             CCCeeccc--CcCcCCChHHHHHHhhhcCCCCceecc--cccccccCcchHHHHHHhccCCCcchhhhccccccCCCcch
Q psy16685         11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDE   86 (99)
Q Consensus        11 ~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~   86 (99)
                      ..+|.|..  |++.|.....|..|+..|.+.++|.|+  .|++.|.....|..|++.|.+++++.|..|+..+.....+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  69999999999999999999999999999999998888777


Q ss_pred             hhhhh
Q psy16685         87 KNLNK   91 (99)
Q Consensus        87 ~~~~~   91 (99)
                      .|+..
T Consensus        83 ~H~~~   87 (89)
T 2wbs_A           83 LHMKR   87 (89)
T ss_dssp             HHGGG
T ss_pred             HHHHh
Confidence            77643

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.69  E-value=1.1e-17  Score=85.91  Aligned_cols=65  Identities=37%  Similarity=0.656  Sum_probs=61.2

Q ss_pred             CeehhhhhcCCCCeecc--cCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhcc
Q psy16685          1 MIYILRVLISEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      |.+|+++|.++++|.|.  .|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|.
T Consensus        23 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           23 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             HHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            46799999999999997  699999999999999999999999999999999999999999999874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.68  E-value=4.1e-17  Score=85.35  Aligned_cols=66  Identities=38%  Similarity=0.654  Sum_probs=62.1

Q ss_pred             CeehhhhhcCCCCeecc--cCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccC
Q psy16685          1 MIYILRVLISEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      |..|+++|.++++|.|.  .|++.|.....|..|+++|.+.++|.|..|++.|.....|..|+++|.+
T Consensus        33 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            46799999999999996  6999999999999999999999999999999999999999999999864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=9.7e-18  Score=88.97  Aligned_cols=69  Identities=22%  Similarity=0.304  Sum_probs=63.2

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHH-hccCCCcchh
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM-THIKVNDDFK   72 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~   72 (99)
                      |..|+++|.  ++|.|..|++.|.....|..|+. |.+++||.|..|++.|.....|..|++ .|.+++++.+
T Consensus        32 l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           32 QGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            457888884  69999999999999999999996 999999999999999999999999997 8999988865

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=2.9e-17  Score=88.83  Aligned_cols=84  Identities=23%  Similarity=0.321  Sum_probs=77.5

Q ss_pred             cCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHh---ccCCCcchhhhccccccCCCcc
Q psy16685          9 ISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMT---HIKVNDDFKEILNLEPVSGSND   85 (99)
Q Consensus         9 ~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~~~~~~~~~~~~~~~   85 (99)
                      +++++|.|..|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.   +.+++++.|..|+..+.....+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            5788999999999999999999999999999999999999999999999999995   5789999999999999988888


Q ss_pred             hhhhhhh
Q psy16685         86 EKNLNKF   92 (99)
Q Consensus        86 ~~~~~~~   92 (99)
                      ..|+...
T Consensus        83 ~~H~~~h   89 (124)
T 2dlq_A           83 RLHMVSH   89 (124)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHc
Confidence            8887544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2e-16  Score=75.73  Aligned_cols=57  Identities=33%  Similarity=0.659  Sum_probs=52.8

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHH-HhccCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHR-MTHIKVN   68 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~   68 (99)
                      +||.|..|++.|.....|..|+++|++.+||.|..|++.|.....|..|+ +.|.++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            58999999999999999999999999999999999999999999999997 5777653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.65  E-value=4.3e-17  Score=89.01  Aligned_cols=62  Identities=31%  Similarity=0.516  Sum_probs=54.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      .|+ .|++++||.|..|++.|.....|..|+++|  .+||.|..|++.|.....|..|+++|+++
T Consensus        65 ~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           65 RLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            344 588899999999999999999999999988  78899999999999999999999998875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.64  E-value=6.1e-17  Score=82.28  Aligned_cols=76  Identities=25%  Similarity=0.370  Sum_probs=66.6

Q ss_pred             Ceec--ccCcCcCCChHHHHHHhhhcCCCCceeccc--ccccccCcchHHHHHHhccCCCcchhhh---ccccccCCCcc
Q psy16685         13 PHVC--SVCSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKVNDDFKEI---LNLEPVSGSND   85 (99)
Q Consensus        13 ~~~C--~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~---~~~~~~~~~~~   85 (99)
                      ||.|  ..|++.|.....|..|+++|.+++||.|+.  |++.|.....|..|+++|++   +.|..   |+..+.....+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6889  889999999999999999999999999988  99999999999999999988   88888   88888777777


Q ss_pred             hhhhhh
Q psy16685         86 EKNLNK   91 (99)
Q Consensus        86 ~~~~~~   91 (99)
                      ..|+..
T Consensus        78 ~~H~~~   83 (85)
T 2j7j_A           78 LKHVAE   83 (85)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            666543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.8e-16  Score=78.67  Aligned_cols=60  Identities=40%  Similarity=0.768  Sum_probs=55.9

Q ss_pred             hhhcCCCCeecc--cCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhcc
Q psy16685          6 RVLISEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus         6 ~~h~~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      .++.++++|.|+  .|++.|.....|..|+++|.+.++|.|..|++.|.....|..|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            457889999997  699999999999999999999999999999999999999999998874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=9.5e-16  Score=74.80  Aligned_cols=60  Identities=20%  Similarity=0.365  Sum_probs=55.2

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc-cccccccCcchHHHHHHhccCCCc
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ-VCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      ..+++||.|..|++.|. ...|..|+++ ++++||.|. .|++.|...+.|..|+++|....+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            35788999999999999 9999999999 999999999 999999999999999999887654

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=7.1e-16  Score=70.11  Aligned_cols=46  Identities=30%  Similarity=0.445  Sum_probs=40.2

Q ss_pred             eehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          2 IYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .+|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CCSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3688889999999999999999999999999989988889988765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.60  E-value=6.6e-16  Score=70.18  Aligned_cols=45  Identities=36%  Similarity=0.403  Sum_probs=40.4

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999998876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.60  E-value=8.3e-16  Score=69.87  Aligned_cols=45  Identities=33%  Similarity=0.439  Sum_probs=40.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            688999999999999999999999999999999999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=7.1e-16  Score=70.10  Aligned_cols=45  Identities=44%  Similarity=0.600  Sum_probs=40.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            688899999999999999999999999999999999899998876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.60  E-value=6.6e-16  Score=70.24  Aligned_cols=45  Identities=36%  Similarity=0.531  Sum_probs=40.6

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999998876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=8.2e-16  Score=69.89  Aligned_cols=45  Identities=36%  Similarity=0.493  Sum_probs=40.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=9.7e-16  Score=69.61  Aligned_cols=46  Identities=39%  Similarity=0.517  Sum_probs=41.1

Q ss_pred             eehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          2 IYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .+|+++|++++||.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3688999999999999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=8.4e-16  Score=69.82  Aligned_cols=45  Identities=31%  Similarity=0.409  Sum_probs=41.0

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7.9e-16  Score=69.91  Aligned_cols=45  Identities=36%  Similarity=0.439  Sum_probs=40.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            688889999999999999999999999999999998899998876

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.59  E-value=6.9e-16  Score=78.32  Aligned_cols=62  Identities=23%  Similarity=0.330  Sum_probs=58.2

Q ss_pred             CeehhhhhcCCCCeeccc--CcCcCCChHHHHHHhhhcCCCCceeccc---ccccccCcchHHHHHHhcc
Q psy16685          1 MIYILRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV---CGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~   65 (99)
                      |..|+++|.+++||.|+.  |++.|.....|..|+++|++   |.|..   |++.|.....|..|+++|+
T Consensus        19 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           19 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            467999999999999988  99999999999999999988   99999   9999999999999999874

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7.3e-16  Score=70.02  Aligned_cols=45  Identities=38%  Similarity=0.574  Sum_probs=39.5

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688888899999999999999999999999888888888888876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.59  E-value=8.2e-16  Score=69.89  Aligned_cols=45  Identities=36%  Similarity=0.469  Sum_probs=40.0

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688889999999999999999999999999999998899998876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=6.4e-16  Score=70.26  Aligned_cols=45  Identities=40%  Similarity=0.520  Sum_probs=40.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999998876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=5.5e-16  Score=70.51  Aligned_cols=46  Identities=26%  Similarity=0.229  Sum_probs=39.9

Q ss_pred             eehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          2 IYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .+|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3688888999999999999999999999999888888888888776

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=7.2e-16  Score=70.08  Aligned_cols=45  Identities=33%  Similarity=0.458  Sum_probs=39.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            688889999999999999999999999999999998899988876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=9.6e-16  Score=69.61  Aligned_cols=45  Identities=40%  Similarity=0.565  Sum_probs=40.5

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999998876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1e-15  Score=69.59  Aligned_cols=45  Identities=33%  Similarity=0.499  Sum_probs=40.4

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688889999999999999999999999999999999999998876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1e-15  Score=69.54  Aligned_cols=45  Identities=38%  Similarity=0.589  Sum_probs=39.8

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688889999999999999999999999999989988899988876

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=1.5e-15  Score=78.69  Aligned_cols=61  Identities=28%  Similarity=0.383  Sum_probs=56.8

Q ss_pred             CeecccCcCcCCChHHHHHHhhh-cCCCCc--------eecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRI-HSGEKP--------HQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .+.|..|++.|.....|..|++. |.+.++        |.|..|++.|.....|..|+++|++++||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            46799999999999999999998 888877        89999999999999999999999999999874

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=8.2e-16  Score=69.93  Aligned_cols=45  Identities=40%  Similarity=0.593  Sum_probs=40.3

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999998876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.5e-16  Score=69.64  Aligned_cols=45  Identities=40%  Similarity=0.569  Sum_probs=41.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=8.5e-16  Score=69.81  Aligned_cols=45  Identities=36%  Similarity=0.494  Sum_probs=40.0

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688889999999999999999999999999999998899988876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.1e-15  Score=69.50  Aligned_cols=45  Identities=36%  Similarity=0.456  Sum_probs=40.3

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588889999999999999999999999999999999999998876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.2e-16  Score=69.72  Aligned_cols=45  Identities=38%  Similarity=0.509  Sum_probs=39.6

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            688888999999999999999999999999888888888988876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.58  E-value=1.3e-15  Score=69.15  Aligned_cols=45  Identities=38%  Similarity=0.493  Sum_probs=39.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588889999999999999999999999999999998889988876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.1e-15  Score=69.45  Aligned_cols=45  Identities=29%  Similarity=0.337  Sum_probs=38.8

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688888888888888888888888888888888888888888766

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=7.4e-16  Score=70.05  Aligned_cols=45  Identities=36%  Similarity=0.602  Sum_probs=39.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688888888899999999999988888888888888888888766

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=1e-15  Score=69.53  Aligned_cols=45  Identities=33%  Similarity=0.425  Sum_probs=40.0

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|+.|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688889999999999999999999999999999998899988876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.2e-15  Score=69.32  Aligned_cols=45  Identities=38%  Similarity=0.535  Sum_probs=39.6

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            588888999999999999999999999999888988888988876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.5e-15  Score=69.06  Aligned_cols=45  Identities=31%  Similarity=0.476  Sum_probs=39.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588889999999999999999999999999999998899998876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.8e-16  Score=69.63  Aligned_cols=45  Identities=31%  Similarity=0.519  Sum_probs=40.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.2e-15  Score=69.37  Aligned_cols=45  Identities=36%  Similarity=0.568  Sum_probs=39.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688889999999999999999999999999999988889988876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.2e-15  Score=69.32  Aligned_cols=45  Identities=38%  Similarity=0.511  Sum_probs=39.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            588889999999999999999999999999988988889988876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.8e-15  Score=68.79  Aligned_cols=45  Identities=31%  Similarity=0.451  Sum_probs=39.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999899998876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=1.2e-15  Score=68.67  Aligned_cols=44  Identities=36%  Similarity=0.460  Sum_probs=37.1

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888888888888888888888888888888888888765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=8.9e-16  Score=69.77  Aligned_cols=45  Identities=36%  Similarity=0.514  Sum_probs=38.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688888888888888888888888888888888888888888776

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.57  E-value=3.9e-16  Score=75.43  Aligned_cols=55  Identities=15%  Similarity=0.257  Sum_probs=49.2

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHH
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLY   58 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~   58 (99)
                      |..|+++|++++||.|+.|++.|.....|.   .+|++++||.|..|++.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            678999999999999999999999888776   7899999999999999998776653

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.6e-15  Score=68.88  Aligned_cols=45  Identities=38%  Similarity=0.541  Sum_probs=39.4

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688889999999999999999999999999988888888888754

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.8e-15  Score=68.70  Aligned_cols=45  Identities=42%  Similarity=0.564  Sum_probs=39.6

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478889999999999999999999999999999988899988876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.57  E-value=2.1e-15  Score=68.56  Aligned_cols=45  Identities=31%  Similarity=0.382  Sum_probs=39.4

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578888899999999999999999999999888988888988776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.57  E-value=1.7e-15  Score=68.85  Aligned_cols=45  Identities=40%  Similarity=0.611  Sum_probs=37.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888766

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=2.1e-15  Score=68.51  Aligned_cols=45  Identities=36%  Similarity=0.500  Sum_probs=38.5

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478888888888888888888888888888888888888888776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=2.4e-15  Score=68.35  Aligned_cols=45  Identities=42%  Similarity=0.478  Sum_probs=39.3

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478888999999999999999999999999888888889988876

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=3e-16  Score=84.04  Aligned_cols=69  Identities=16%  Similarity=0.240  Sum_probs=60.7

Q ss_pred             Ceehhhh--hcCCCCee-cccCcCcC--CChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCc
Q psy16685          1 MIYILRV--LISEKPHV-CSVCSKGF--STSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus         1 l~~h~~~--h~~~~~~~-C~~c~~~~--~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      |..|+++  |.+.+++. |..|++.|  .....|..|+++|.+++||.|..|++.|.....|..|++.|+....
T Consensus        35 L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           35 LTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             HHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             HHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            4578888  77777665 99999999  8889999999999999999999999999999999999999875443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=6.4e-16  Score=74.21  Aligned_cols=54  Identities=24%  Similarity=0.346  Sum_probs=51.1

Q ss_pred             CCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhh
Q psy16685         38 GEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNK   91 (99)
Q Consensus        38 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (99)
                      +++||.|..|++.|...+.|..|+++|++++||.|..|+..+...+++..|+..
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~   54 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV   54 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc
Confidence            479999999999999999999999999999999999999999999999998764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=2.3e-15  Score=68.40  Aligned_cols=45  Identities=27%  Similarity=0.261  Sum_probs=39.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            578888888899999999999988888889888888888888776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=2.7e-15  Score=68.13  Aligned_cols=45  Identities=40%  Similarity=0.527  Sum_probs=38.3

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888766

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=1.4e-15  Score=69.06  Aligned_cols=45  Identities=38%  Similarity=0.493  Sum_probs=37.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            578888888888888888888888888888888888888888766

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=2e-15  Score=68.60  Aligned_cols=45  Identities=29%  Similarity=0.547  Sum_probs=38.6

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            478888888888888888888888888888888888888888776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=2.5e-15  Score=68.33  Aligned_cols=45  Identities=31%  Similarity=0.490  Sum_probs=38.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888766

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=4.4e-15  Score=67.63  Aligned_cols=45  Identities=33%  Similarity=0.431  Sum_probs=39.8

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhh-hcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRR-IHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~-~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|++ +|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            57888999999999999999999999999988 8988899998876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.6e-15  Score=75.41  Aligned_cols=52  Identities=23%  Similarity=0.436  Sum_probs=48.7

Q ss_pred             Ceehhh-hhcCCCCeeccc--CcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685          1 MIYILR-VLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus         1 l~~h~~-~h~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      |.+|++ +|.+++||.|..  |++.|.....|..|+++|++++||.|..|++.|.
T Consensus        25 L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           25 LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             HHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            467998 799999999999  9999999999999999999999999999999884

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=3.4e-15  Score=67.81  Aligned_cols=45  Identities=31%  Similarity=0.443  Sum_probs=38.0

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            367888888888888888888888888888888888888888766

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.52  E-value=2.4e-16  Score=80.93  Aligned_cols=64  Identities=20%  Similarity=0.311  Sum_probs=59.5

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhcc
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      |.+|+++|++++||.|..|++.|.....|..|+..+.+ .+|.|..|+..|.....|..|++..+
T Consensus        19 L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           19 LTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            46799999999999999999999999999999999885 78999999999999999999998754

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=8.3e-15  Score=66.50  Aligned_cols=45  Identities=36%  Similarity=0.502  Sum_probs=37.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.52  E-value=1.1e-14  Score=64.83  Aligned_cols=42  Identities=31%  Similarity=0.465  Sum_probs=34.4

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            677788888888888888888888888888888888888774

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.1e-14  Score=66.10  Aligned_cols=44  Identities=36%  Similarity=0.594  Sum_probs=38.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68888999999999999999999999999999998888888863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.1e-14  Score=66.01  Aligned_cols=44  Identities=36%  Similarity=0.559  Sum_probs=39.4

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68889999999999999999999999999999999999998863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=9e-15  Score=66.36  Aligned_cols=44  Identities=36%  Similarity=0.569  Sum_probs=37.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68888888888888888888888888888888888888888863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=9.3e-15  Score=66.34  Aligned_cols=44  Identities=36%  Similarity=0.505  Sum_probs=38.4

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58888999999999999999999999999988888888888863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.1e-14  Score=66.07  Aligned_cols=44  Identities=39%  Similarity=0.523  Sum_probs=38.8

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            68888999999999999999999999999999999888988863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.1e-14  Score=64.76  Aligned_cols=42  Identities=36%  Similarity=0.505  Sum_probs=37.3

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceec
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC   44 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C   44 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            478889999999999999999999999999999998888876

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.1e-14  Score=65.99  Aligned_cols=44  Identities=39%  Similarity=0.514  Sum_probs=37.0

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            57888888888888888888888888888888888888888863

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.4e-14  Score=65.67  Aligned_cols=44  Identities=39%  Similarity=0.553  Sum_probs=38.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68888888899999999999998888988988888888888863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.3e-14  Score=65.74  Aligned_cols=44  Identities=43%  Similarity=0.645  Sum_probs=38.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            68888888899999999999998888988988888888888863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.50  E-value=1.1e-14  Score=66.13  Aligned_cols=44  Identities=45%  Similarity=0.634  Sum_probs=36.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57888888888888888888888888888888888888888753

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.3e-14  Score=65.25  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=33.5

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5777788888888888888888888888887777777777763

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.3e-14  Score=65.86  Aligned_cols=44  Identities=39%  Similarity=0.525  Sum_probs=36.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57888888888888888888888888888888888888888863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.9e-14  Score=64.01  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=34.5

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            677788888888888888888888888888888888888773

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.6e-14  Score=65.56  Aligned_cols=44  Identities=43%  Similarity=0.591  Sum_probs=37.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57888888888899999988888888888888888888888863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.5e-14  Score=65.62  Aligned_cols=44  Identities=41%  Similarity=0.572  Sum_probs=36.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57888888888888888888888888888888888888888863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.3e-14  Score=65.80  Aligned_cols=44  Identities=39%  Similarity=0.538  Sum_probs=37.6

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            57888888888888888888888888888888888888888863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.4e-14  Score=65.05  Aligned_cols=43  Identities=33%  Similarity=0.434  Sum_probs=36.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5888888888888888888888888888888888888888874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.5e-14  Score=65.65  Aligned_cols=43  Identities=40%  Similarity=0.573  Sum_probs=37.8

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6888888899999999999999988899998888888888886

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.7e-14  Score=64.78  Aligned_cols=43  Identities=35%  Similarity=0.495  Sum_probs=35.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5778888888888888888888888888888888888888774

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.6e-14  Score=65.46  Aligned_cols=43  Identities=37%  Similarity=0.599  Sum_probs=37.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5888888888888888888888888888888888888888886

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.49  E-value=2.6e-14  Score=70.58  Aligned_cols=59  Identities=42%  Similarity=0.745  Sum_probs=53.4

Q ss_pred             hhhcCCCCeeccc--CcCcCCChHHHHHHhhhcCCCCceeccc--ccccccCcchHHHHHHhc
Q psy16685          6 RVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTH   64 (99)
Q Consensus         6 ~~h~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h   64 (99)
                      ......++|.|..  |++.|.....|..|+++|++++||.|..  |++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3456778999988  9999999999999999999999999965  999999999999998765

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.49  E-value=2.6e-14  Score=67.04  Aligned_cols=47  Identities=38%  Similarity=0.719  Sum_probs=41.9

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhh-hcCCCCceecccccccccC
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRR-IHSGEKPHQCQVCGKRFTA   53 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~-~~~~~~~~~C~~C~~~f~~   53 (99)
                      .|.+++||.|..|++.|.....|..|++ +|.+++||.|..|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4678899999999999999999999986 8999999999999998875

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.3e-14  Score=65.84  Aligned_cols=43  Identities=33%  Similarity=0.474  Sum_probs=36.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            6788888888888888888888888888888888888888875

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.7e-14  Score=64.82  Aligned_cols=43  Identities=19%  Similarity=0.227  Sum_probs=35.8

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5788888888888888888888888888888888888888774

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=65.32  Aligned_cols=44  Identities=39%  Similarity=0.528  Sum_probs=37.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57888888888888888888888888888888888888888863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.1e-14  Score=65.11  Aligned_cols=44  Identities=32%  Similarity=0.554  Sum_probs=37.7

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57888888888999999999988888888888888888888863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.3e-14  Score=64.96  Aligned_cols=43  Identities=37%  Similarity=0.519  Sum_probs=36.5

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            5788888888888888888888888888888888888888885

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.2e-14  Score=66.01  Aligned_cols=43  Identities=35%  Similarity=0.464  Sum_probs=34.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5778888888888888888888888888888888888888775

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.5e-14  Score=64.90  Aligned_cols=43  Identities=30%  Similarity=0.470  Sum_probs=35.4

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3777888888888888888888888888888888888888875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.2e-14  Score=65.13  Aligned_cols=44  Identities=39%  Similarity=0.555  Sum_probs=36.8

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            36788888888888888888888888888888888888888863

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.6e-14  Score=65.44  Aligned_cols=44  Identities=39%  Similarity=0.557  Sum_probs=35.1

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQV   46 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   46 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57778888888888888888888888888888888888887753

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2e-14  Score=64.54  Aligned_cols=43  Identities=28%  Similarity=0.400  Sum_probs=35.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778888888888888888888888888888888888888774

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.1e-14  Score=64.52  Aligned_cols=44  Identities=43%  Similarity=0.611  Sum_probs=34.9

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      ++++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45677888888888888888888888888888888888888765

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.3e-14  Score=64.93  Aligned_cols=43  Identities=42%  Similarity=0.591  Sum_probs=37.5

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6888888888899999998898888888888888888888885

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.2e-14  Score=65.08  Aligned_cols=43  Identities=35%  Similarity=0.485  Sum_probs=37.3

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788888888888988988888888888888888888888886

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.2e-14  Score=63.31  Aligned_cols=41  Identities=32%  Similarity=0.552  Sum_probs=32.4

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceec
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC   44 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C   44 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            66777888888888888888888888888888877777766

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.46  E-value=4.1e-14  Score=62.86  Aligned_cols=41  Identities=29%  Similarity=0.443  Sum_probs=30.5

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceec
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC   44 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C   44 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56677777777777777777777777777777777777765

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.5e-14  Score=64.40  Aligned_cols=43  Identities=33%  Similarity=0.362  Sum_probs=34.6

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCC-CCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSG-EKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~-~~~~~C~   45 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            477788888888888888888888888888888887 7888775

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.2e-14  Score=63.80  Aligned_cols=43  Identities=44%  Similarity=0.649  Sum_probs=35.0

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677888888888888888888888888888888888888875

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.9e-14  Score=64.65  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=34.2

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5777888888888888888888888888888888887777763

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.8e-14  Score=63.46  Aligned_cols=41  Identities=29%  Similarity=0.456  Sum_probs=30.2

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceec
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC   44 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C   44 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56677777777777777777777777777777777777765

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.2e-14  Score=65.03  Aligned_cols=43  Identities=33%  Similarity=0.362  Sum_probs=33.4

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5777777788888888888888777777787777777777775

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.7e-14  Score=64.72  Aligned_cols=45  Identities=29%  Similarity=0.443  Sum_probs=41.8

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=8.7e-14  Score=62.50  Aligned_cols=42  Identities=31%  Similarity=0.354  Sum_probs=33.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceec
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC   44 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C   44 (99)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            577888888888888888888888888888888888877765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.44  E-value=2.8e-14  Score=64.63  Aligned_cols=45  Identities=27%  Similarity=0.388  Sum_probs=41.9

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3.4e-14  Score=64.43  Aligned_cols=43  Identities=37%  Similarity=0.417  Sum_probs=34.8

Q ss_pred             hhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         5 ~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      +++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5677888888888888888888888888888888888888765

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.44  E-value=4.3e-14  Score=64.08  Aligned_cols=44  Identities=30%  Similarity=0.409  Sum_probs=41.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999998765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=3.6e-14  Score=63.73  Aligned_cols=44  Identities=32%  Similarity=0.428  Sum_probs=40.7

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999998765

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.9e-14  Score=64.19  Aligned_cols=45  Identities=36%  Similarity=0.464  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998764

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.2e-14  Score=64.44  Aligned_cols=45  Identities=29%  Similarity=0.493  Sum_probs=41.9

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=8.4e-14  Score=62.53  Aligned_cols=42  Identities=26%  Similarity=0.333  Sum_probs=31.7

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567777777777777777777777777777777777777763

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.43  E-value=3.1e-14  Score=64.53  Aligned_cols=45  Identities=27%  Similarity=0.361  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.3e-14  Score=64.43  Aligned_cols=45  Identities=24%  Similarity=0.321  Sum_probs=41.8

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.43  E-value=3.2e-14  Score=64.53  Aligned_cols=45  Identities=27%  Similarity=0.459  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=5e-14  Score=70.42  Aligned_cols=65  Identities=18%  Similarity=0.235  Sum_probs=58.8

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCC
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      |..|++++.+++|+.|..|+..|. ...|..|. .+.+.+|+.|+.|++.|. ...|..|++++.++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            678999999999999999999995 88899999 889999999999999887 488999999988764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.43  E-value=3e-14  Score=64.59  Aligned_cols=45  Identities=22%  Similarity=0.325  Sum_probs=41.8

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477889999999999999999999999999999999999998765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.5e-14  Score=64.38  Aligned_cols=45  Identities=27%  Similarity=0.412  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++|+.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999998765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.3e-14  Score=64.46  Aligned_cols=45  Identities=31%  Similarity=0.425  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999998765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=5e-14  Score=63.81  Aligned_cols=45  Identities=31%  Similarity=0.473  Sum_probs=41.6

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++|+.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999998765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.1e-14  Score=64.11  Aligned_cols=45  Identities=31%  Similarity=0.480  Sum_probs=41.6

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999998765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=5.2e-14  Score=63.78  Aligned_cols=44  Identities=32%  Similarity=0.527  Sum_probs=41.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999998765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.2e-14  Score=64.53  Aligned_cols=45  Identities=29%  Similarity=0.426  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++|+.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.42  E-value=8.4e-14  Score=62.81  Aligned_cols=42  Identities=29%  Similarity=0.468  Sum_probs=33.7

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccccc
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCG   48 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   48 (99)
                      +|++++||.|..|++.|.....|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            577788888888888888888888888888888888887775

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.7e-14  Score=64.28  Aligned_cols=45  Identities=33%  Similarity=0.420  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999998765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4e-14  Score=64.16  Aligned_cols=45  Identities=31%  Similarity=0.433  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999998765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.3e-14  Score=64.46  Aligned_cols=45  Identities=33%  Similarity=0.470  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.4e-14  Score=64.38  Aligned_cols=45  Identities=33%  Similarity=0.475  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999998765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.2e-14  Score=64.51  Aligned_cols=45  Identities=27%  Similarity=0.382  Sum_probs=41.8

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.7e-14  Score=63.89  Aligned_cols=45  Identities=31%  Similarity=0.407  Sum_probs=41.9

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.2e-14  Score=64.13  Aligned_cols=45  Identities=27%  Similarity=0.361  Sum_probs=41.6

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999998764

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.42  E-value=5e-14  Score=63.80  Aligned_cols=45  Identities=29%  Similarity=0.390  Sum_probs=41.8

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999998765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.2e-14  Score=64.07  Aligned_cols=45  Identities=29%  Similarity=0.392  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999998765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.5e-14  Score=64.35  Aligned_cols=45  Identities=33%  Similarity=0.451  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999998765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.1e-14  Score=64.08  Aligned_cols=45  Identities=31%  Similarity=0.416  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.42  E-value=3.3e-14  Score=66.64  Aligned_cols=51  Identities=20%  Similarity=0.245  Sum_probs=40.9

Q ss_pred             cCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcc
Q psy16685         20 SKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus        20 ~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      ++.|.....|..|+++|++++||.|..|++.|...+.|..|+++|++++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            355666777777888888888888888888888888888888888888775

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.6e-14  Score=64.28  Aligned_cols=45  Identities=33%  Similarity=0.526  Sum_probs=41.6

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++|+.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=5.3e-14  Score=63.77  Aligned_cols=44  Identities=27%  Similarity=0.357  Sum_probs=41.2

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999998765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.8e-14  Score=64.22  Aligned_cols=45  Identities=29%  Similarity=0.447  Sum_probs=41.5

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999998765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=3.8e-14  Score=64.25  Aligned_cols=45  Identities=29%  Similarity=0.382  Sum_probs=41.8

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=4e-14  Score=64.13  Aligned_cols=45  Identities=31%  Similarity=0.405  Sum_probs=41.6

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999998765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.5e-14  Score=63.97  Aligned_cols=45  Identities=31%  Similarity=0.516  Sum_probs=41.6

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999998765

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=7.6e-15  Score=76.77  Aligned_cols=72  Identities=10%  Similarity=-0.057  Sum_probs=64.1

Q ss_pred             cCCChHHHHHHhhhcCCCCceeccccccccc-CcchHHHHHHhccC-CCcchhhhccccccCCCcchhhhhhhh
Q psy16685         22 GFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT-ASSNLYYHRMTHIK-VNDDFKEILNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        22 ~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (99)
                      .+.....+..|+++|.+.++|.|..|++.|. ....|..|+++|++ +++|.|..|+..+.....+..|+...+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            4555566678999999999999999999999 99999999999998 999999999999999999988886554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.4e-14  Score=63.71  Aligned_cols=44  Identities=34%  Similarity=0.547  Sum_probs=41.0

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999865

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.4e-14  Score=63.75  Aligned_cols=44  Identities=32%  Similarity=0.403  Sum_probs=41.2

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999998765

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=4.2e-14  Score=72.28  Aligned_cols=62  Identities=16%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             hhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhhhhh
Q psy16685         34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFNIV   95 (99)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (99)
                      ..+.+.++|.|+.|++.|.....|..|+++|++++||.|..|+..+.....+..|+.+.+..
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            34566789999999999999999999999999999999999999999999999999877653

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.5e-14  Score=63.70  Aligned_cols=45  Identities=36%  Similarity=0.510  Sum_probs=41.8

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999998765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=8.1e-14  Score=63.12  Aligned_cols=44  Identities=32%  Similarity=0.477  Sum_probs=41.1

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999998765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.6e-14  Score=63.66  Aligned_cols=44  Identities=30%  Similarity=0.404  Sum_probs=41.2

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999998765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.9e-14  Score=63.86  Aligned_cols=45  Identities=33%  Similarity=0.412  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999998765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=8.5e-14  Score=63.05  Aligned_cols=44  Identities=27%  Similarity=0.373  Sum_probs=41.2

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999998765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.40  E-value=6.9e-14  Score=63.39  Aligned_cols=44  Identities=20%  Similarity=0.329  Sum_probs=41.0

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999998765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4e-14  Score=64.11  Aligned_cols=45  Identities=29%  Similarity=0.437  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999998765

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.9e-14  Score=64.20  Aligned_cols=45  Identities=24%  Similarity=0.396  Sum_probs=41.7

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999998765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.3e-14  Score=63.48  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=41.6

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++|+.|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999998765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.4e-14  Score=63.52  Aligned_cols=44  Identities=27%  Similarity=0.354  Sum_probs=41.1

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++|+.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999998765

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.4e-13  Score=61.99  Aligned_cols=44  Identities=39%  Similarity=0.503  Sum_probs=35.5

Q ss_pred             hhhhhcCCCCeecc--cCcCcCCChHHHHHHhhhcCCCCceecccc
Q psy16685          4 ILRVLISEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPHQCQVC   47 (99)
Q Consensus         4 h~~~h~~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   47 (99)
                      |.++|++++||.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888888887  788888888888888888888888888765

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=2.3e-13  Score=62.19  Aligned_cols=42  Identities=33%  Similarity=0.489  Sum_probs=31.3

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccc
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGK   49 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   49 (99)
                      +.+++||.|.+|++.|.....|..|+++|++++||.|..|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            566677777777777777777777777777777777777763

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=9.9e-14  Score=72.38  Aligned_cols=72  Identities=10%  Similarity=-0.085  Sum_probs=63.8

Q ss_pred             CcCCChHHHHHHhhhcCCCCceecccccccc-cCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhhh
Q psy16685         21 KGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF-TASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        21 ~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (99)
                      ..|.....+..|+..+.+.++|.|..|++.| .....|..|+++| ++++|.|..|+..+.....+..|+...+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            4567778888899999999999999999999 9999999999999 9999999999999999888888843333

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=62.74  Aligned_cols=44  Identities=27%  Similarity=0.386  Sum_probs=41.0

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56788999999999999999999999999999999999998765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=3.2e-13  Score=61.15  Aligned_cols=42  Identities=40%  Similarity=0.540  Sum_probs=30.3

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      .+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            345677777777777777777777777777777777777765

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.37  E-value=1.8e-13  Score=60.74  Aligned_cols=41  Identities=32%  Similarity=0.505  Sum_probs=38.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      |+++|++++||.|..|++.|...+.|..|+++|.+++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            46778999999999999999999999999999999999886

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.7e-13  Score=62.09  Aligned_cols=43  Identities=30%  Similarity=0.433  Sum_probs=40.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6778999999999999999999999999999999999998865

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.37  E-value=1.5e-13  Score=62.25  Aligned_cols=43  Identities=33%  Similarity=0.519  Sum_probs=40.2

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.37  E-value=4.4e-13  Score=62.73  Aligned_cols=43  Identities=23%  Similarity=0.284  Sum_probs=40.3

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCcee
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQ   43 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~   43 (99)
                      |..|+++|++++||.|..|++.|.....|..|+++|++++||.
T Consensus        12 l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           12 TEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             hhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            5789999999999999999999999999999999999998873

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.4e-13  Score=61.26  Aligned_cols=42  Identities=36%  Similarity=0.590  Sum_probs=29.7

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      +.++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            345667777777777777777777777777777777777764

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.4e-13  Score=60.98  Aligned_cols=42  Identities=26%  Similarity=0.486  Sum_probs=39.3

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            467889999999999999999999999999999999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=62.41  Aligned_cols=45  Identities=24%  Similarity=0.356  Sum_probs=41.5

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHH-hccCCCcchhhhc
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRM-THIKVNDDFKEIL   75 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~~~   75 (99)
                      .|+++|++++||.|..|++.|.....|..|++ +|.+++|+.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36788999999999999999999999999999 9999999998765

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=3.9e-14  Score=70.85  Aligned_cols=66  Identities=27%  Similarity=0.353  Sum_probs=58.5

Q ss_pred             HHHHhhhcCCCCceecccccccccCcchHHHHHH-hccCC-CcchhhhccccccCCCcchhhhhhhhh
Q psy16685         29 LNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRM-THIKV-NDDFKEILNLEPVSGSNDEKNLNKFNI   94 (99)
Q Consensus        29 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (99)
                      +..|+++|++++||.|..|++.|.....|..|++ .|.++ ++|.|..|+..+.....+..|+...+.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3468899999999999999999999999999997 67764 899999999999999999998877654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.4e-13  Score=60.32  Aligned_cols=41  Identities=27%  Similarity=0.425  Sum_probs=38.2

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      |+++|++++||.|..|++.|...+.|..|+++|.+++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            46778999999999999999999999999999999999876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=3e-13  Score=67.55  Aligned_cols=44  Identities=34%  Similarity=0.558  Sum_probs=41.9

Q ss_pred             CeehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceec
Q psy16685          1 MIYILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC   44 (99)
Q Consensus         1 l~~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C   44 (99)
                      |.+|+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus        34 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           34 LSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             HHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            46899999999999999999999999999999999999999987

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2e-13  Score=61.74  Aligned_cols=44  Identities=34%  Similarity=0.505  Sum_probs=40.5

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            46788999999999999999999999999999999999998853

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.7e-13  Score=67.67  Aligned_cols=62  Identities=29%  Similarity=0.268  Sum_probs=56.0

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhhh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (99)
                      +.++|++++||.|..|++.|.....|..|+++|.++++|.|..|+..+.....+..|+....
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            34578899999999999999999999999999999999999999999999888888876543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-13  Score=61.90  Aligned_cols=44  Identities=32%  Similarity=0.499  Sum_probs=40.5

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999998753

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2.3e-13  Score=61.62  Aligned_cols=43  Identities=28%  Similarity=0.516  Sum_probs=40.1

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3678899999999999999999999999999999999999875

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.5e-13  Score=61.49  Aligned_cols=43  Identities=33%  Similarity=0.519  Sum_probs=40.1

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4778899999999999999999999999999999999999875

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=61.72  Aligned_cols=44  Identities=32%  Similarity=0.473  Sum_probs=40.6

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++.+||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999998753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.4e-13  Score=61.05  Aligned_cols=42  Identities=26%  Similarity=0.416  Sum_probs=39.5

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            677899999999999999999999999999999999999874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.2e-13  Score=61.60  Aligned_cols=44  Identities=32%  Similarity=0.487  Sum_probs=40.3

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999998753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=7.2e-13  Score=58.49  Aligned_cols=39  Identities=31%  Similarity=0.543  Sum_probs=25.9

Q ss_pred             hhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceec
Q psy16685          6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQC   44 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C   44 (99)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            346666666666666666666666666666666666655

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=61.82  Aligned_cols=43  Identities=40%  Similarity=0.595  Sum_probs=40.1

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4778899999999999999999999999999999999999875

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.9e-13  Score=61.88  Aligned_cols=43  Identities=26%  Similarity=0.433  Sum_probs=40.0

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3678899999999999999999999999999999999999875

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.8e-13  Score=61.96  Aligned_cols=44  Identities=34%  Similarity=0.495  Sum_probs=40.4

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999998753

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.2e-13  Score=61.67  Aligned_cols=43  Identities=33%  Similarity=0.492  Sum_probs=40.1

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999875

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.35  E-value=3.3e-13  Score=59.84  Aligned_cols=41  Identities=27%  Similarity=0.434  Sum_probs=38.2

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      |+++|++++||.|..|++.|...+.|..|+++|.+++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56788999999999999999999999999999999999875

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.7e-13  Score=60.71  Aligned_cols=42  Identities=33%  Similarity=0.536  Sum_probs=39.3

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      .|+++|++.+||.|..|++.|.....|..|+++|.+++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999999999876

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3e-13  Score=61.17  Aligned_cols=43  Identities=26%  Similarity=0.403  Sum_probs=40.0

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|+++++|.|..|++.|.....|..|+++|.+++|+.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            3678899999999999999999999999999999999999875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=61.11  Aligned_cols=44  Identities=30%  Similarity=0.450  Sum_probs=40.5

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999998853

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=7.3e-13  Score=59.13  Aligned_cols=40  Identities=20%  Similarity=0.298  Sum_probs=27.6

Q ss_pred             hhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            3566667777777777777777777777777777777664

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.3e-13  Score=61.57  Aligned_cols=44  Identities=32%  Similarity=0.465  Sum_probs=40.4

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++.+||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            36788999999999999999999999999999999999998753

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-13  Score=61.94  Aligned_cols=44  Identities=30%  Similarity=0.461  Sum_probs=40.4

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++.+||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46788999999999999999999999999999999999998753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2e-13  Score=61.76  Aligned_cols=44  Identities=34%  Similarity=0.486  Sum_probs=40.4

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999998753

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.1e-13  Score=60.51  Aligned_cols=41  Identities=29%  Similarity=0.544  Sum_probs=38.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56789999999999999999999999999999999999875

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.6e-13  Score=61.42  Aligned_cols=44  Identities=32%  Similarity=0.443  Sum_probs=40.5

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46788999999999999999999999999999999999998753

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.4e-13  Score=61.50  Aligned_cols=43  Identities=30%  Similarity=0.492  Sum_probs=40.1

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4678899999999999999999999999999999999999875

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.8e-13  Score=61.33  Aligned_cols=44  Identities=27%  Similarity=0.366  Sum_probs=40.3

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEI   74 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~   74 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999998753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.6e-13  Score=61.38  Aligned_cols=43  Identities=30%  Similarity=0.491  Sum_probs=40.0

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3678899999999999999999999999999999999999875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.1e-13  Score=61.75  Aligned_cols=43  Identities=35%  Similarity=0.549  Sum_probs=40.1

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4678899999999999999999999999999999999999875

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.3e-13  Score=61.14  Aligned_cols=41  Identities=29%  Similarity=0.507  Sum_probs=38.4

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      |+++|++++||.|..|++.|...+.|..|+++|++++|+.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67789999999999999999999999999999999999875

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-13  Score=61.09  Aligned_cols=42  Identities=31%  Similarity=0.470  Sum_probs=39.3

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            467889999999999999999999999999999999999886

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.7e-13  Score=60.23  Aligned_cols=41  Identities=29%  Similarity=0.493  Sum_probs=38.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      |+++|++++||.|..|++.|...+.|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56788999999999999999999999999999999999875

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.6e-13  Score=60.38  Aligned_cols=42  Identities=19%  Similarity=0.287  Sum_probs=39.4

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            467889999999999999999999999999999999999886

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.8e-13  Score=66.36  Aligned_cols=60  Identities=23%  Similarity=0.271  Sum_probs=54.1

Q ss_pred             hhcCCCCceecccccccccCcchHHHHHHh-c-cCCCcchhhhccccccCCCcchhhhhhhh
Q psy16685         34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMT-H-IKVNDDFKEILNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (99)
                      ++|++++||.|..|++.|.....|..|++. | .+++++.|..|+..+.....+..|+...+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            467889999999999999999999999998 7 58999999999999999888888887654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.1e-13  Score=60.53  Aligned_cols=42  Identities=29%  Similarity=0.485  Sum_probs=39.2

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++++.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            367889999999999999999999999999999999999886

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.8e-13  Score=60.89  Aligned_cols=42  Identities=38%  Similarity=0.557  Sum_probs=39.5

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            577899999999999999999999999999999999999885

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=4.4e-13  Score=65.81  Aligned_cols=60  Identities=20%  Similarity=0.257  Sum_probs=54.8

Q ss_pred             hcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhhhh
Q psy16685         35 IHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFNI   94 (99)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (99)
                      .+.++++|.|..|++.|.....|..|+++|.+++++.|..|+..+.....+..|+...+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence            467889999999999999999999999999999999999999999999999888876553

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6.2e-13  Score=60.15  Aligned_cols=42  Identities=29%  Similarity=0.463  Sum_probs=39.1

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567889999999999999999999999999999999999874

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.5e-13  Score=60.96  Aligned_cols=43  Identities=30%  Similarity=0.553  Sum_probs=39.9

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.5e-13  Score=60.90  Aligned_cols=42  Identities=24%  Similarity=0.375  Sum_probs=39.3

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            467889999999999999999999999999999999999986

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.9e-13  Score=60.48  Aligned_cols=43  Identities=30%  Similarity=0.403  Sum_probs=39.7

Q ss_pred             hhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         33 RRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        33 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      +++|++++||.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4678899999999999999999999999999999999998765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.4e-13  Score=59.38  Aligned_cols=42  Identities=38%  Similarity=0.534  Sum_probs=38.9

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      .|+++|++++||.|..|++.|...+.|..|+++|++++|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            367889999999999999999999999999999999999875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.31  E-value=2.8e-13  Score=63.85  Aligned_cols=55  Identities=22%  Similarity=0.321  Sum_probs=47.4

Q ss_pred             CCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhh
Q psy16685         38 GEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKF   92 (99)
Q Consensus        38 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (99)
                      |++||.|..|++.|.....|..|+++|.+++|+.|..|+..+.....+..|+...
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHh
Confidence            4579999999999999999999999999999999999999998888888887654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7e-13  Score=59.97  Aligned_cols=42  Identities=26%  Similarity=0.379  Sum_probs=39.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccC-CCcchhh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK-VNDDFKE   73 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~~~   73 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            67889999999999999999999999999999999 9999874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.3e-13  Score=59.58  Aligned_cols=41  Identities=27%  Similarity=0.362  Sum_probs=38.5

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      |+++|++++||.|..|++.|.....|..|+++|.+++||.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            56788999999999999999999999999999999999886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.1e-13  Score=60.68  Aligned_cols=43  Identities=30%  Similarity=0.511  Sum_probs=40.0

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|++.+||.|..|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4678899999999999999999999999999999999999875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.6e-13  Score=67.38  Aligned_cols=59  Identities=19%  Similarity=0.206  Sum_probs=54.1

Q ss_pred             cCCCCceecccccccccCcchHHHHHHhccC---CCcchhhhccccccCCCcchhhhhhhhh
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHRMTHIK---VNDDFKEILNLEPVSGSNDEKNLNKFNI   94 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (99)
                      |++++||.|..|++.|.....|..|+++|.+   +++|.|..|+..+.....+..|+...+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            6789999999999999999999999999996   8999999999999999999999866554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.4e-13  Score=61.04  Aligned_cols=43  Identities=30%  Similarity=0.465  Sum_probs=39.9

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .|+++|.+++||.|..|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3678899999999999999999999999999999999999875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.2e-13  Score=60.40  Aligned_cols=43  Identities=35%  Similarity=0.486  Sum_probs=39.6

Q ss_pred             hhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         33 RRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        33 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      +++|.+++||.|..|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4568899999999999999999999999999999999998765

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=1.4e-12  Score=58.65  Aligned_cols=42  Identities=33%  Similarity=0.496  Sum_probs=39.4

Q ss_pred             hcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhcc
Q psy16685         35 IHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILN   76 (99)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~   76 (99)
                      .|++++||.|..|++.|.....|..|+++|++++++.|..|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            578899999999999999999999999999999999998875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.27  E-value=9.7e-13  Score=71.57  Aligned_cols=79  Identities=16%  Similarity=0.116  Sum_probs=65.8

Q ss_pred             CCeecccCcCcC------CChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcc
Q psy16685         12 KPHVCSVCSKGF------STSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSND   85 (99)
Q Consensus        12 ~~~~C~~c~~~~------~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~   85 (99)
                      +++.|+.|...|      .....|..|+ .|++++||.|..|++.|.....|..|+++|  ++|+.|..|+..+.....+
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHH
Confidence            455676665444      4566666676 588899999999999999999999999999  8999999999999999988


Q ss_pred             hhhhhhhh
Q psy16685         86 EKNLNKFN   93 (99)
Q Consensus        86 ~~~~~~~~   93 (99)
                      ..|+...+
T Consensus       117 ~~H~~~h~  124 (129)
T 2wbt_A          117 LDHVCKKH  124 (129)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHHC
Confidence            88887655

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2e-12  Score=58.48  Aligned_cols=41  Identities=32%  Similarity=0.481  Sum_probs=38.2

Q ss_pred             hhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         33 RRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        33 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      +++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            46788999999999999999999999999999999999885

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.5e-12  Score=56.70  Aligned_cols=39  Identities=28%  Similarity=0.456  Sum_probs=36.1

Q ss_pred             hhcCCCCceecccccccccCcchHHHHHHhccCCCcchh
Q psy16685         34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            457889999999999999999999999999999999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=6.1e-13  Score=67.49  Aligned_cols=65  Identities=18%  Similarity=0.199  Sum_probs=57.4

Q ss_pred             HHHHhhhcCCCCceecccccccccCcchHHHHHHhccCC----CcchhhhccccccCCCcchhhhhhhh
Q psy16685         29 LNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV----NDDFKEILNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        29 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (99)
                      +..|+++|++++||.|..|++.|.....|..|++.++.+    +++.|..|+..+.....+..|+....
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   71 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA   71 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHcc
Confidence            456889999999999999999999999999999987765    79999999999998888888876544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=1.8e-13  Score=70.33  Aligned_cols=63  Identities=13%  Similarity=0.144  Sum_probs=50.8

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCc
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      .+.++|++++||.|..|++.|.....|..|+++|++++||.|..|    .....|..|+++|.+...
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~~~~   77 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADGAFA   77 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCCSSS
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhcccccccc
Confidence            345678999999999999999999999999999999999999765    455667777777776443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=3e-12  Score=57.07  Aligned_cols=40  Identities=20%  Similarity=0.311  Sum_probs=37.1

Q ss_pred             hhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      ++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            4578899999999999999999999999999999999875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.9e-12  Score=58.26  Aligned_cols=41  Identities=32%  Similarity=0.557  Sum_probs=37.8

Q ss_pred             hhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhh
Q psy16685         33 RRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE   73 (99)
Q Consensus        33 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   73 (99)
                      .++|++++||.|..|++.|.....|..|+++|.++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            45688999999999999999999999999999999999874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=2.1e-12  Score=61.45  Aligned_cols=54  Identities=17%  Similarity=0.218  Sum_probs=49.6

Q ss_pred             CceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhhh
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (99)
                      +||.|..|++.|.....|..|+++|.+++++.|..|+..+.....+..|+...+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H   54 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence            589999999999999999999999999999999999999999888888876554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=2.7e-12  Score=67.61  Aligned_cols=48  Identities=17%  Similarity=0.306  Sum_probs=42.6

Q ss_pred             Ceehhh-hh---cCCCCeecccCcCcCCChHHHHHH-hhhcCCCCceeccccc
Q psy16685          1 MIYILR-VL---ISEKPHVCSVCSKGFSTSSSLNTH-RRIHSGEKPHQCQVCG   48 (99)
Q Consensus         1 l~~h~~-~h---~~~~~~~C~~c~~~~~~~~~l~~h-~~~~~~~~~~~C~~C~   48 (99)
                      |.+|++ +|   .+++||.|.+|++.|.....|..| +++|++++||.|..+.
T Consensus        34 L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           34 FTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             HHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             HHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            467887 48   568999999999999999999999 8999999999998743

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=5.3e-12  Score=57.54  Aligned_cols=42  Identities=21%  Similarity=0.332  Sum_probs=39.0

Q ss_pred             hcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhcc
Q psy16685         35 IHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILN   76 (99)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~   76 (99)
                      .+.+.++|.|..|++.|.....|..|+++|++++||.|..|+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            356789999999999999999999999999999999999886

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=8.3e-12  Score=58.31  Aligned_cols=47  Identities=30%  Similarity=0.364  Sum_probs=42.6

Q ss_pred             hcCCCCceecccccccccCcchHHHHHH-hccCCCcchhhhccccccC
Q psy16685         35 IHSGEKPHQCQVCGKRFTASSNLYYHRM-THIKVNDDFKEILNLEPVS   81 (99)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~~~~~~~~~   81 (99)
                      .+.+++||.|..|++.|.....|..|++ +|.+++|+.|..|+..+.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4677899999999999999999999997 8999999999999987654

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.5e-12  Score=57.99  Aligned_cols=44  Identities=34%  Similarity=0.476  Sum_probs=39.9

Q ss_pred             HhhhcCCCCceecc--cccccccCcchHHHHHHhccCCCcchhhhc
Q psy16685         32 HRRIHSGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKVNDDFKEIL   75 (99)
Q Consensus        32 h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~   75 (99)
                      |.++|++++||.|.  .|++.|.....|..|+++|.+++|+.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899999998  899999999999999999999999998765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.20  E-value=4.5e-12  Score=62.74  Aligned_cols=58  Identities=19%  Similarity=0.248  Sum_probs=52.9

Q ss_pred             hcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhh
Q psy16685         35 IHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKF   92 (99)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (99)
                      .+.+.++|.|..|++.|.....|..|+++|.+++++.|..|+..+.....+..|+...
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   68 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH   68 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhc
Confidence            4567899999999999999999999999999999999999999999988888887653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.19  E-value=1.9e-11  Score=52.51  Aligned_cols=35  Identities=34%  Similarity=0.493  Sum_probs=24.1

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      |+++|++++||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            56667777777777777777777777777666654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.18  E-value=1.6e-11  Score=53.47  Aligned_cols=35  Identities=17%  Similarity=0.315  Sum_probs=19.3

Q ss_pred             CCCCceecccccccccCcchHHHHHHhccCCCcch
Q psy16685         37 SGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDF   71 (99)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   71 (99)
                      ++++||.|..|++.|...+.|..|+++|.+++|+.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            34455555555555555555555555555555554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.2e-11  Score=53.19  Aligned_cols=33  Identities=24%  Similarity=0.340  Sum_probs=17.2

Q ss_pred             cCCCCceecccccccccCcchHHHHHHhccCCC
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      |++++||.|..|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            444555555555555555555555555555444

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.5e-11  Score=52.89  Aligned_cols=37  Identities=24%  Similarity=0.361  Sum_probs=33.9

Q ss_pred             hhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCc
Q psy16685          5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP   41 (99)
Q Consensus         5 ~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~   41 (99)
                      +++|++++||.|..|++.|.....|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999998764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.16  E-value=4.2e-12  Score=59.70  Aligned_cols=53  Identities=25%  Similarity=0.243  Sum_probs=48.4

Q ss_pred             ceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhhh
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKFN   93 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (99)
                      ||.|..|++.|.....|..|+++|.+++++.|..|+..+.....+..|+....
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            68999999999999999999999999999999999999998888888876543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.15  E-value=2.5e-11  Score=52.85  Aligned_cols=38  Identities=18%  Similarity=0.468  Sum_probs=34.4

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      |++++||.|..|++.|.....|..|+++|++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            57889999999999999999999999999999998753

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=1.3e-11  Score=63.67  Aligned_cols=45  Identities=22%  Similarity=0.400  Sum_probs=41.6

Q ss_pred             Ceehhhh-hcCCCC--------eecccCcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685          1 MIYILRV-LISEKP--------HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus         1 l~~h~~~-h~~~~~--------~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      |.+|+++ |.++++        |.|..|++.|.....|..|+++|++++||.|.
T Consensus        41 L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             HHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4679998 988887        89999999999999999999999999999986

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=2.7e-11  Score=59.06  Aligned_cols=40  Identities=28%  Similarity=0.348  Sum_probs=31.6

Q ss_pred             cCCCCceeccc--ccccccCcchHHHHH-HhccCCCcchhhhc
Q psy16685         36 HSGEKPHQCQV--CGKRFTASSNLYYHR-MTHIKVNDDFKEIL   75 (99)
Q Consensus        36 ~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~~~   75 (99)
                      .++++||.|..  |+++|...+.|..|+ ++|++++|++|...
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            46778888864  888888888888886 57888888887543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.13  E-value=2.1e-11  Score=52.35  Aligned_cols=36  Identities=39%  Similarity=0.680  Sum_probs=33.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      |+++|++++||.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            677899999999999999999999999999999874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.13  E-value=2.2e-12  Score=62.05  Aligned_cols=53  Identities=15%  Similarity=0.157  Sum_probs=45.8

Q ss_pred             HHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcc
Q psy16685         30 NTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSND   85 (99)
Q Consensus        30 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~   85 (99)
                      ..|+++|++++||.|+.|++.|.....|.   ++|.+++|+.|..|+..+....+.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            35788899999999999999999888776   789999999999999887665544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.12  E-value=4.4e-11  Score=50.62  Aligned_cols=33  Identities=27%  Similarity=0.356  Sum_probs=17.9

Q ss_pred             cCCCCceecccccccccCcchHHHHHHhccCCC
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      |++++||.|..|++.|...+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            344555555555555555555555555555544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.10  E-value=5.7e-11  Score=50.33  Aligned_cols=32  Identities=31%  Similarity=0.587  Sum_probs=16.0

Q ss_pred             CCCCceecccccccccCcchHHHHHHhccCCC
Q psy16685         37 SGEKPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      ++++||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            34445555555555555555555555554443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=2.9e-11  Score=59.56  Aligned_cols=57  Identities=18%  Similarity=0.216  Sum_probs=50.8

Q ss_pred             hhcCCCCceecc--cccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhh
Q psy16685         34 RIHSGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLN   90 (99)
Q Consensus        34 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (99)
                      ..+.+.++|.|+  .|++.|.....|..|+++|.+++++.|..|+..+.....+..|+.
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            346788999997  699999999999999999999999999999999988877777764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.08  E-value=1.1e-10  Score=49.39  Aligned_cols=35  Identities=23%  Similarity=0.562  Sum_probs=32.1

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCc
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP   41 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~   41 (99)
                      +|++++||.|..|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47899999999999999999999999999988764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.08  E-value=1.1e-10  Score=49.29  Aligned_cols=35  Identities=29%  Similarity=0.400  Sum_probs=32.0

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhhhcCCCCc
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKP   41 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~   41 (99)
                      +|++++||.|..|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47889999999999999999999999999988764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=1.4e-10  Score=56.59  Aligned_cols=39  Identities=21%  Similarity=0.381  Sum_probs=35.4

Q ss_pred             hcCCCCeeccc--CcCcCCChHHHHHHh-hhcCCCCceeccc
Q psy16685          8 LISEKPHVCSV--CSKGFSTSSSLNTHR-RIHSGEKPHQCQV   46 (99)
Q Consensus         8 h~~~~~~~C~~--c~~~~~~~~~l~~h~-~~~~~~~~~~C~~   46 (99)
                      .++++||.|..  |++.|.....|..|+ ++|++++|+.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            67899999975  999999999999997 6899999999864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.7e-10  Score=49.53  Aligned_cols=33  Identities=27%  Similarity=0.264  Sum_probs=17.3

Q ss_pred             hhhcCCCCeecccCcCcCCChHHHHHH-hhhcCC
Q psy16685          6 RVLISEKPHVCSVCSKGFSTSSSLNTH-RRIHSG   38 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~~~l~~h-~~~~~~   38 (99)
                      ++|++++||.|..|++.|.....|..| ++.|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            345555555555555555555555555 444443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.2e-10  Score=49.06  Aligned_cols=32  Identities=28%  Similarity=0.427  Sum_probs=18.5

Q ss_pred             cCCCCceecccccccccCc-chHHHHHHhccCC
Q psy16685         36 HSGEKPHQCQVCGKRFTAS-SNLYYHRMTHIKV   67 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~   67 (99)
                      |++++||.|..|++.|... +.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            4555556666666666655 5666666555543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.99  E-value=2.3e-10  Score=47.99  Aligned_cols=30  Identities=27%  Similarity=0.450  Sum_probs=14.8

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCce
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPH   42 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~   42 (99)
                      ||.|..|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            444555555555555555555555444444

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.1e-10  Score=48.28  Aligned_cols=32  Identities=31%  Similarity=0.448  Sum_probs=16.7

Q ss_pred             cCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      |.+++||.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            34445555555555555555555555555443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.97  E-value=5.3e-10  Score=46.80  Aligned_cols=32  Identities=28%  Similarity=0.430  Sum_probs=29.8

Q ss_pred             CceecccccccccCcchHHHHHHhccCCCcch
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKVNDDF   71 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   71 (99)
                      +||.|..|++.|...+.|..|+++|++++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999999873

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=3.3e-10  Score=48.80  Aligned_cols=34  Identities=35%  Similarity=0.596  Sum_probs=18.5

Q ss_pred             CCCCceecc--cccccccCcchHHHHHHhccCCCcc
Q psy16685         37 SGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus        37 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      ++++||.|.  .|++.|...+.|..|+++|++++++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            344555555  3555555555555555555555543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.6e-10  Score=48.00  Aligned_cols=32  Identities=28%  Similarity=0.393  Sum_probs=17.0

Q ss_pred             cCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      |.+++||.|..|++.|.....|..|+++|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44445555555555555555555555555443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.8e-10  Score=49.02  Aligned_cols=32  Identities=19%  Similarity=0.232  Sum_probs=18.1

Q ss_pred             cCCCCceeccc--ccccccCcchHHHHHHhccCC
Q psy16685         36 HSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        36 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +++++||.|..  |++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34455666653  666666666666666655543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.7e-10  Score=55.13  Aligned_cols=53  Identities=17%  Similarity=0.246  Sum_probs=48.2

Q ss_pred             CCCCceecccccccccCcchHHHHHHhccCCCcchhh-hccccccCCCcchhhhhh
Q psy16685         37 SGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKE-ILNLEPVSGSNDEKNLNK   91 (99)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~   91 (99)
                      .+.+||.|..|++.|. ...|..|+++ .+++|+.|. .|+..+.....+..|+..
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHh
Confidence            4568999999999999 9999999999 999999999 999999888888888754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.1e-10  Score=48.30  Aligned_cols=30  Identities=20%  Similarity=0.417  Sum_probs=14.7

Q ss_pred             CCCCceecccccccccCcchHHHHHHhccC
Q psy16685         37 SGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      ++++||.|..|++.|...+.|..|+++|++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            344445555555555555555555544443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.6e-10  Score=48.97  Aligned_cols=34  Identities=18%  Similarity=0.179  Sum_probs=30.9

Q ss_pred             hhcCCCCceecccccccccCcchHHHH-HHhccCC
Q psy16685         34 RIHSGEKPHQCQVCGKRFTASSNLYYH-RMTHIKV   67 (99)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   67 (99)
                      ++|++++||.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            468889999999999999999999999 8888865

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=6.6e-10  Score=47.24  Aligned_cols=34  Identities=35%  Similarity=0.483  Sum_probs=31.2

Q ss_pred             hhhcCCCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685          6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +.|.+++||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4688999999999999999999999999999875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.8e-10  Score=48.29  Aligned_cols=34  Identities=26%  Similarity=0.348  Sum_probs=31.3

Q ss_pred             hhhcCCCCeecccCcCcCCCh-HHHHHHhhhcCCC
Q psy16685          6 RVLISEKPHVCSVCSKGFSTS-SSLNTHRRIHSGE   39 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~-~~l~~h~~~~~~~   39 (99)
                      ++|++++||.|..|++.|... ..|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            578999999999999999999 9999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=6.1e-10  Score=47.34  Aligned_cols=34  Identities=18%  Similarity=0.306  Sum_probs=31.1

Q ss_pred             hhhcCCCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685          6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +.|++++||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            3578999999999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=5.8e-10  Score=47.34  Aligned_cols=32  Identities=34%  Similarity=0.704  Sum_probs=17.2

Q ss_pred             cCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            34445555555555555555555555555543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=8.4e-10  Score=46.81  Aligned_cols=34  Identities=38%  Similarity=0.541  Sum_probs=31.3

Q ss_pred             hhhcCCCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685          6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      .+|.+++||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            4688999999999999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=5.7e-10  Score=48.01  Aligned_cols=35  Identities=23%  Similarity=0.562  Sum_probs=32.3

Q ss_pred             hcCCCCeecc--cCcCcCCChHHHHHHhhhcCCCCce
Q psy16685          8 LISEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEKPH   42 (99)
Q Consensus         8 h~~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~~~   42 (99)
                      |++++||.|.  .|++.|.....|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5789999999  5999999999999999999998876

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=9.4e-10  Score=46.73  Aligned_cols=32  Identities=28%  Similarity=0.393  Sum_probs=18.9

Q ss_pred             cCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +.+++||.|..|++.|.....|..|+++|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            34455666666666666666666666665544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.3e-09  Score=47.35  Aligned_cols=33  Identities=18%  Similarity=0.254  Sum_probs=30.1

Q ss_pred             hhcCCCCeeccc--CcCcCCChHHHHHHhhhcCCC
Q psy16685          7 VLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus         7 ~h~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      .+++++||.|..  |++.|.....|..|+++|++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            367899999986  999999999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.90  E-value=6.5e-10  Score=50.55  Aligned_cols=32  Identities=34%  Similarity=0.827  Sum_probs=15.1

Q ss_pred             cCCCCceecccccccccCcchHHHHHH-hccCC
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHRM-THIKV   67 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   67 (99)
                      |++++||.|..|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            344444555555555555555555544 44443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1.1e-10  Score=59.81  Aligned_cols=46  Identities=13%  Similarity=0.152  Sum_probs=41.3

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccc
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNL   77 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~   77 (99)
                      +..+|++++||.|..|++.|.....|..|+++|++++|+.|..+..
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            3456889999999999999999999999999999999999877654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.6e-09  Score=45.90  Aligned_cols=34  Identities=29%  Similarity=0.674  Sum_probs=31.0

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhhhcCCCC
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      +|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999998753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.87  E-value=1.2e-09  Score=49.63  Aligned_cols=34  Identities=26%  Similarity=0.499  Sum_probs=29.7

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhh-hcCCCC
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRR-IHSGEK   40 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~-~~~~~~   40 (99)
                      +|++++||.|..|++.|.....|..|++ +|+++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            5789999999999999999999999999 898764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.87  E-value=4.7e-10  Score=50.75  Aligned_cols=37  Identities=24%  Similarity=0.357  Sum_probs=28.1

Q ss_pred             HhhhcCCCCceecc--cccccccCcchHHHHHHhccCCC
Q psy16685         32 HRRIHSGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        32 h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      +...|++++||.|.  .|++.|...+.|..|+++|++++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            44457778888885  68888888888888888887753

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.86  E-value=7.4e-10  Score=54.28  Aligned_cols=54  Identities=22%  Similarity=0.217  Sum_probs=46.7

Q ss_pred             cCCCCceeccc--ccccccCcchHHHHHHhccCCCcchhhh--ccccccCCCcchhhh
Q psy16685         36 HSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKVNDDFKEI--LNLEPVSGSNDEKNL   89 (99)
Q Consensus        36 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~--~~~~~~~~~~~~~~~   89 (99)
                      ....++|.|..  |++.|.....|..|+++|.++++|.|..  |+..+.....+..|+
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence            45568999988  9999999999999999999999999964  998888777666665

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.84  E-value=8.3e-10  Score=49.90  Aligned_cols=39  Identities=21%  Similarity=0.377  Sum_probs=34.1

Q ss_pred             eehhhhhcCCCCeecc--cCcCcCCChHHHHHHhhhcCCCC
Q psy16685          2 IYILRVLISEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      ..|...|++++||.|.  .|++.|.....|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3466779999999996  79999999999999999998753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=3.2e-09  Score=45.00  Aligned_cols=33  Identities=39%  Similarity=0.545  Sum_probs=30.4

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      .|.+++||.|..|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            477899999999999999999999999999875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.81  E-value=1.3e-09  Score=46.77  Aligned_cols=25  Identities=28%  Similarity=0.644  Sum_probs=14.7

Q ss_pred             cCCCCeecccCcCcCCChHHHHHHh
Q psy16685          9 ISEKPHVCSVCSKGFSTSSSLNTHR   33 (99)
Q Consensus         9 ~~~~~~~C~~c~~~~~~~~~l~~h~   33 (99)
                      .+++||.|.+|++.|...+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4555666666666666666665554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.79  E-value=3e-09  Score=45.50  Aligned_cols=31  Identities=32%  Similarity=0.493  Sum_probs=16.3

Q ss_pred             CCCCceecc--cccccccCcchHHHHHHhccCC
Q psy16685         37 SGEKPHQCQ--VCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        37 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ++++||.|.  .|++.|...+.|..|+++|+++
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            344555554  2555555555555555555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.78  E-value=1.5e-10  Score=48.23  Aligned_cols=29  Identities=34%  Similarity=0.473  Sum_probs=15.4

Q ss_pred             ceecccccccccCcchHHHHHHhccCCCc
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      ||.|..|++.|...+.|..|+++|++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            45555555555555555555555555544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.9e-10  Score=56.32  Aligned_cols=59  Identities=20%  Similarity=0.319  Sum_probs=51.7

Q ss_pred             HHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhhh
Q psy16685         27 SSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNKF   92 (99)
Q Consensus        27 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (99)
                      ..|..|+++|.+++||.|..|++.|.....|..       ++++.|..|+..+.....+..|+...
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H   62 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNE   62 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhh
Confidence            446678899999999999999999999988876       78999999999999999988887653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.77  E-value=4.6e-09  Score=42.17  Aligned_cols=27  Identities=33%  Similarity=0.563  Sum_probs=16.4

Q ss_pred             ceecccccccccCcchHHHHHHhccCC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ||.|..|++.|...+.|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            556666666666666666666665544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.75  E-value=5.6e-09  Score=42.11  Aligned_cols=28  Identities=36%  Similarity=0.641  Sum_probs=14.8

Q ss_pred             CceecccccccccCcchHHHHHHhccCC
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3455555555555555555555555443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.72  E-value=8.3e-09  Score=41.58  Aligned_cols=28  Identities=39%  Similarity=0.405  Sum_probs=16.3

Q ss_pred             ceecccccccccCcchHHHHHHhccCCC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      ||.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4556666666666666666666555543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.72  E-value=7e-09  Score=41.56  Aligned_cols=27  Identities=26%  Similarity=0.555  Sum_probs=14.6

Q ss_pred             ceecccccccccCcchHHHHHHhccCC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.71  E-value=8.9e-09  Score=43.97  Aligned_cols=34  Identities=35%  Similarity=0.634  Sum_probs=30.2

Q ss_pred             hhcCCCCeecc--cCcCcCCChHHHHHHhhhcCCCC
Q psy16685          7 VLISEKPHVCS--VCSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus         7 ~h~~~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      .|++++||.|.  .|++.|.....|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            37889999998  49999999999999999998753

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.71  E-value=7.7e-09  Score=41.34  Aligned_cols=28  Identities=39%  Similarity=0.663  Sum_probs=18.1

Q ss_pred             CceecccccccccCcchHHHHHHhccCC
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566666666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.70  E-value=6.2e-10  Score=46.23  Aligned_cols=31  Identities=23%  Similarity=0.334  Sum_probs=28.9

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCce
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH   42 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~   42 (99)
                      +||.|..|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4899999999999999999999999998876

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.70  E-value=7.1e-09  Score=41.50  Aligned_cols=27  Identities=44%  Similarity=0.746  Sum_probs=16.0

Q ss_pred             ceecccccccccCcchHHHHHHhccCC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ||.|..|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455666666666666666666655544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.69  E-value=1.4e-08  Score=41.78  Aligned_cols=28  Identities=29%  Similarity=0.653  Sum_probs=15.2

Q ss_pred             Cceecc--cccccccCcchHHHHHHhccCC
Q psy16685         40 KPHQCQ--VCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        40 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            345555  5555555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.68  E-value=5.6e-09  Score=44.72  Aligned_cols=26  Identities=27%  Similarity=0.447  Sum_probs=24.4

Q ss_pred             cCCCCceecccccccccCcchHHHHH
Q psy16685         36 HSGEKPHQCQVCGKRFTASSNLYYHR   61 (99)
Q Consensus        36 ~~~~~~~~C~~C~~~f~~~~~l~~H~   61 (99)
                      ..+++||.|..|+++|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46789999999999999999999998

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.67  E-value=2.1e-08  Score=40.29  Aligned_cols=29  Identities=31%  Similarity=0.592  Sum_probs=26.6

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      ++||.|..|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47899999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=1.9e-08  Score=48.73  Aligned_cols=32  Identities=25%  Similarity=0.432  Sum_probs=18.8

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +.+++||.|.+|++.|.....|..|+++|++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            44555666666666666666666666665553

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=2.6e-09  Score=43.00  Aligned_cols=27  Identities=44%  Similarity=0.748  Sum_probs=17.8

Q ss_pred             ceecccccccccCcchHHHHHHhccCC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            566666666666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.66  E-value=1.1e-08  Score=41.84  Aligned_cols=27  Identities=48%  Similarity=0.837  Sum_probs=13.6

Q ss_pred             ceecc--cccccccCcchHHHHHHhccCC
Q psy16685         41 PHQCQ--VCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        41 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            44454  4555555555555555555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.63  E-value=1.9e-08  Score=39.70  Aligned_cols=25  Identities=36%  Similarity=0.610  Sum_probs=13.0

Q ss_pred             CceecccccccccCcchHHHHHHhc
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555444

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=3.1e-08  Score=48.00  Aligned_cols=35  Identities=26%  Similarity=0.314  Sum_probs=31.3

Q ss_pred             hcCCCCceecccccccccCcchHHHHHHhccCCCc
Q psy16685         35 IHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      .+.+++||.|..|++.|.....|..|+++|+++..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            35678999999999999999999999999998654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.06  E-value=3.7e-09  Score=42.75  Aligned_cols=28  Identities=29%  Similarity=0.498  Sum_probs=18.0

Q ss_pred             CceecccccccccCcchHHHHHHhccCC
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566666666666666666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.63  E-value=3e-08  Score=39.63  Aligned_cols=28  Identities=29%  Similarity=0.530  Sum_probs=25.9

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.62  E-value=1.6e-08  Score=40.23  Aligned_cols=25  Identities=48%  Similarity=0.939  Sum_probs=12.6

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIH   36 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~   36 (99)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555554444

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.61  E-value=4.3e-08  Score=39.11  Aligned_cols=28  Identities=36%  Similarity=0.821  Sum_probs=25.8

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.61  E-value=3.5e-08  Score=39.18  Aligned_cols=28  Identities=36%  Similarity=0.718  Sum_probs=25.3

Q ss_pred             CCceecccccccccCcchHHHHHHhccC
Q psy16685         39 EKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      ++||.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3689999999999999999999998864

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.59  E-value=1.5e-08  Score=40.13  Aligned_cols=25  Identities=20%  Similarity=0.473  Sum_probs=13.0

Q ss_pred             CceecccccccccCcchHHHHHHhc
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.59  E-value=4.7e-08  Score=39.21  Aligned_cols=30  Identities=27%  Similarity=0.410  Sum_probs=26.8

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKP   41 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~   41 (99)
                      +||.|..|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            479999999999999999999999987653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.59  E-value=1.8e-08  Score=39.67  Aligned_cols=24  Identities=33%  Similarity=0.833  Sum_probs=11.6

Q ss_pred             eecccCcCcCCChHHHHHHhhhcC
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      |.|..|++.|.....|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            445555555554444444444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.59  E-value=6.5e-08  Score=39.63  Aligned_cols=29  Identities=28%  Similarity=0.671  Sum_probs=26.6

Q ss_pred             CCCeecc--cCcCcCCChHHHHHHhhhcCCC
Q psy16685         11 EKPHVCS--VCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        11 ~~~~~C~--~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      ++||.|.  .|++.|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4789999  8999999999999999999875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.58  E-value=2.2e-08  Score=40.38  Aligned_cols=26  Identities=27%  Similarity=0.520  Sum_probs=13.3

Q ss_pred             ceecccccccccCcchHHHH-HHhccC
Q psy16685         41 PHQCQVCGKRFTASSNLYYH-RMTHIK   66 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H-~~~h~~   66 (99)
                      ||.|..|++.|...+.|..| +++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            44555555555555555555 344444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.58  E-value=4.5e-08  Score=38.57  Aligned_cols=27  Identities=37%  Similarity=0.696  Sum_probs=24.5

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999998774

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3e-09  Score=52.83  Aligned_cols=61  Identities=10%  Similarity=0.071  Sum_probs=51.6

Q ss_pred             HHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhhh
Q psy16685         28 SLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLNK   91 (99)
Q Consensus        28 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (99)
                      .|..|+.++.+.+|+.|..|+..| ....|..|+ .+.+++|+.|..|+.... ...+..|+..
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            355688888999999999999999 488999999 899999999999998755 4777777654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.56  E-value=4.4e-08  Score=39.04  Aligned_cols=28  Identities=54%  Similarity=0.909  Sum_probs=25.8

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4899999999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.55  E-value=7.5e-08  Score=39.17  Aligned_cols=29  Identities=45%  Similarity=1.001  Sum_probs=26.1

Q ss_pred             CCeecc--cCcCcCCChHHHHHHhhhcCCCC
Q psy16685         12 KPHVCS--VCSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus        12 ~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999998753

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.54  E-value=3.7e-08  Score=38.96  Aligned_cols=27  Identities=33%  Similarity=0.658  Sum_probs=24.4

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999998763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.53  E-value=5e-08  Score=38.81  Aligned_cols=28  Identities=36%  Similarity=0.744  Sum_probs=25.7

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5899999999999999999999998775

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.50  E-value=1.1e-07  Score=37.29  Aligned_cols=27  Identities=26%  Similarity=0.567  Sum_probs=23.7

Q ss_pred             ceecccccccccCcchHHHHHHhccCC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999998764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=1.6e-08  Score=39.57  Aligned_cols=24  Identities=50%  Similarity=0.847  Sum_probs=14.7

Q ss_pred             ceecccccccccCcchHHHHHHhc
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      ||.|..|++.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            556666666666666666665554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.48  E-value=1.3e-07  Score=38.01  Aligned_cols=28  Identities=36%  Similarity=0.810  Sum_probs=25.3

Q ss_pred             CCeecccCcCcCCChHHHHHH-hhhcCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTH-RRIHSGE   39 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h-~~~~~~~   39 (99)
                      +||.|..|++.|.....|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            479999999999999999999 7888775

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=1.9e-08  Score=40.35  Aligned_cols=28  Identities=50%  Similarity=0.904  Sum_probs=25.5

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4899999999999999999999998765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=1.9e-08  Score=40.51  Aligned_cols=29  Identities=45%  Similarity=0.873  Sum_probs=26.1

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      ++||.|..|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36899999999999999999999988764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.34  E-value=2.1e-07  Score=36.94  Aligned_cols=25  Identities=28%  Similarity=0.615  Sum_probs=13.7

Q ss_pred             ceecc--cccccccCcchHHHHHHhcc
Q psy16685         41 PHQCQ--VCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        41 ~~~C~--~C~~~f~~~~~l~~H~~~h~   65 (99)
                      ||.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  55555555555555555543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.68  E-value=6.2e-08  Score=37.80  Aligned_cols=26  Identities=50%  Similarity=0.810  Sum_probs=23.2

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      +||.|..|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999988763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.25  E-value=6.1e-07  Score=35.52  Aligned_cols=27  Identities=37%  Similarity=0.824  Sum_probs=24.5

Q ss_pred             CCeecc--cCcCcCCChHHHHHHhhhcCC
Q psy16685         12 KPHVCS--VCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        12 ~~~~C~--~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      +||.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.93  E-value=2.4e-05  Score=37.42  Aligned_cols=48  Identities=19%  Similarity=0.320  Sum_probs=40.8

Q ss_pred             ccCcCcCCChHHHHHHh-hhcCCCC------ceecc--cccccccCcchHHHHHHhc
Q psy16685         17 SVCSKGFSTSSSLNTHR-RIHSGEK------PHQCQ--VCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        17 ~~c~~~~~~~~~l~~h~-~~~~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h   64 (99)
                      ..|++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45999999999999998 4687665      79996  8999988889999998864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.43  E-value=3e-05  Score=41.81  Aligned_cols=30  Identities=30%  Similarity=0.476  Sum_probs=22.6

Q ss_pred             hhcCCCCceecccccccccCcchHHHHHHh
Q psy16685         34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      ..++|.+||.|..|++.|.+...|..|++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            346777788888888888888888777764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.29  E-value=3.6e-05  Score=41.52  Aligned_cols=32  Identities=31%  Similarity=0.397  Sum_probs=28.4

Q ss_pred             hhhhcCCCCeecccCcCcCCChHHHHHHhhhc
Q psy16685          5 LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIH   36 (99)
Q Consensus         5 ~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~   36 (99)
                      ...|+|++||.|..|++.|.+...|..|.++.
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            45688999999999999999999999998765

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.92  E-value=0.00049  Score=30.57  Aligned_cols=31  Identities=16%  Similarity=0.214  Sum_probs=19.3

Q ss_pred             CceecccccccccCcchHHHHHHhccCCCcc
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      .+|.|+.|+..|.....|+.||+.--++...
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~v~   41 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEMVE   41 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTTCC
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcchhh
Confidence            4566777777777777777777654444333

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.36  E-value=0.0034  Score=33.96  Aligned_cols=76  Identities=18%  Similarity=0.193  Sum_probs=44.7

Q ss_pred             CCeecccCcCcCCChHHHHHHh--hhcCCC-Cceeccc------ccccccCcchHHHHHHhccCCCcchhhhccccccCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHR--RIHSGE-KPHQCQV------CGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSG   82 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~--~~~~~~-~~~~C~~------C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~   82 (99)
                      +++.|..|...|.+...+..|.  +.|... +.+.+..      -+..+....    +.....+...++|.+|...+.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            5788999999999999888886  334221 1121110      011111111    11234556777888888877777


Q ss_pred             Ccchhhhhh
Q psy16685         83 SNDEKNLNK   91 (99)
Q Consensus        83 ~~~~~~~~~   91 (99)
                      .....|+..
T Consensus       107 ~~~~~H~~g  115 (127)
T 1zu1_A          107 VVAESHYIG  115 (127)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHCC
Confidence            777666644

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.33  E-value=0.0031  Score=28.00  Aligned_cols=24  Identities=21%  Similarity=0.512  Sum_probs=22.0

Q ss_pred             CCeecccCcCcCCChHHHHHHhhh
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRI   35 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~   35 (99)
                      .++.|+.|+..|.....|+.|+..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            578999999999999999999883

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.55  E-value=0.013  Score=32.97  Aligned_cols=56  Identities=14%  Similarity=0.258  Sum_probs=28.3

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhccCCCc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      .+..|+.|+..+ ....+..|....-..++..|+.|+..+.. ..+..|..++.|+.+
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            344566666554 33445556544444455566666655533 345666665555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=94.63  E-value=0.018  Score=27.20  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=27.3

Q ss_pred             eehh-hhhcCCC------Ceecc--cCcCcCCChHHHHHHhhhc
Q psy16685          2 IYIL-RVLISEK------PHVCS--VCSKGFSTSSSLNTHRRIH   36 (99)
Q Consensus         2 ~~h~-~~h~~~~------~~~C~--~c~~~~~~~~~l~~h~~~~   36 (99)
                      ..|+ +.|.+.+      +|.|.  .|+..+.....|..|+++.
T Consensus        20 ~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           20 QRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             HHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             HHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4576 4677665      79996  7999988889999998764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.77  E-value=0.062  Score=22.19  Aligned_cols=23  Identities=22%  Similarity=0.457  Sum_probs=16.0

Q ss_pred             ceecccccccccCcchHHHHHHh
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      .|.|+.|.+.|.+...|..|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHh
Confidence            46777777777777777777654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.56  E-value=0.025  Score=30.53  Aligned_cols=23  Identities=26%  Similarity=0.468  Sum_probs=20.7

Q ss_pred             CceecccccccccCcchHHHHHH
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~   62 (99)
                      +++.|..|...|.+...+..|..
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~   53 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQ   53 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHC
Confidence            67899999999999999999983

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.64  E-value=0.09  Score=25.95  Aligned_cols=49  Identities=18%  Similarity=0.342  Sum_probs=34.9

Q ss_pred             CCCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHH
Q psy16685         10 SEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYH   60 (99)
Q Consensus        10 ~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H   60 (99)
                      ..--|.|..||.++.- ..+..|...-.+...|.|.-|+..|... .++.|
T Consensus         7 ~MV~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~~-~y~~H   55 (79)
T 1wjv_A            7 GMVFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWGD-DYKSH   55 (79)
T ss_dssp             CCCEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEGG-GTTTC
T ss_pred             ceeEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCCC-CEeCE
Confidence            3445889999987764 4477886655555679999999999753 34444

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=92.06  E-value=0.19  Score=20.91  Aligned_cols=25  Identities=16%  Similarity=0.320  Sum_probs=17.3

Q ss_pred             CceecccccccccCcchHHHHHHhc
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      ..+.|..|+-+|..-..+..|++..
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             CcCeeccccceehhhHHHhhhheec
Confidence            4567777777777777777776643

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=91.93  E-value=0.093  Score=23.19  Aligned_cols=31  Identities=23%  Similarity=0.486  Sum_probs=19.5

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceecccccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF   51 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   51 (99)
                      .|.|..||..|+...-     .   -..-.+|+.||...
T Consensus         3 iY~C~rCg~~fs~~el-----~---~lP~IrCpyCGyri   33 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQL-----K---VLPGVRCPYCGYKI   33 (48)
T ss_dssp             --CCCCTTTTCCCCCS-----C---CCSSSCCTTTCCSC
T ss_pred             EEEeeccCCCccHHHH-----h---hCCCcccCccCcEE
Confidence            4789999999876441     1   11336899998653

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=91.40  E-value=0.12  Score=25.97  Aligned_cols=29  Identities=28%  Similarity=0.442  Sum_probs=18.7

Q ss_pred             CceecccccccccCcchHHHHHHhccCCCcch
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKVNDDF   71 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   71 (99)
                      ....|..||+.|.   .|.+|...++|..|..
T Consensus        20 d~iiClecGK~fK---~LkRHL~~~hgltpee   48 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTTHHSMTPEE   48 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred             CceEecccchhhH---HHHHHHHHccCCCHHH
Confidence            3457777777776   3667777765555543

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=90.37  E-value=0.093  Score=30.58  Aligned_cols=25  Identities=32%  Similarity=0.796  Sum_probs=15.8

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceecccccc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGK   49 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   49 (99)
                      ..|.|..||..+.             |..|+.|+.|+.
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             cEEEECCCCCEEc-------------CcCCCCCCCCCC
Confidence            3577777776543             235677777764

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=90.12  E-value=0.16  Score=26.45  Aligned_cols=11  Identities=55%  Similarity=1.229  Sum_probs=5.3

Q ss_pred             ceecccccccc
Q psy16685         41 PHQCQVCGKRF   51 (99)
Q Consensus        41 ~~~C~~C~~~f   51 (99)
                      |+.|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            44444455444

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=89.74  E-value=0.053  Score=26.90  Aligned_cols=40  Identities=25%  Similarity=0.455  Sum_probs=23.5

Q ss_pred             CeecccCcCcCCChHHHHHHhhhc-CC---------------CCceecccccccccC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIH-SG---------------EKPHQCQVCGKRFTA   53 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~-~~---------------~~~~~C~~C~~~f~~   53 (99)
                      ...|+.||....-.. |...+-+- ..               +-.|+|+.||.-|.-
T Consensus         8 ~~~~PlCG~~L~W~e-LIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG   63 (95)
T 2k5c_A            8 MAKCPICGSPLKWEE-LIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYG   63 (95)
T ss_dssp             CEECSSSCCEECHHH-HHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEET
T ss_pred             cccCCcCCCccCHHH-HHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhc
Confidence            467999998765333 33322211 10               135899999987653

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=89.45  E-value=0.3  Score=23.03  Aligned_cols=31  Identities=19%  Similarity=0.495  Sum_probs=21.6

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTA   53 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   53 (99)
                      -.|.|..|+..+...           ...+..|+.||.....
T Consensus        20 v~Y~C~~Cg~~~~l~-----------~~~~iRC~~CG~RILy   50 (63)
T 3h0g_L           20 MIYLCADCGARNTIQ-----------AKEVIRCRECGHRVMY   50 (63)
T ss_dssp             CCCBCSSSCCBCCCC-----------SSSCCCCSSSCCCCCB
T ss_pred             eEEECCCCCCeeecC-----------CCCceECCCCCcEEEE
Confidence            458899998877533           1356889999876543

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=89.32  E-value=0.13  Score=22.72  Aligned_cols=37  Identities=24%  Similarity=0.495  Sum_probs=19.9

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceeccccccc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKR   50 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~   50 (99)
                      +.|.|..||..+.....-.  .....-..-|.|+.|+..
T Consensus         3 ~~y~C~vCGyvyd~~~Gd~--t~f~~lP~dw~CP~Cg~~   39 (46)
T 6rxn_A            3 QKYVCNVCGYEYDPAEHDN--VPFDQLPDDWCCPVCGVS   39 (46)
T ss_dssp             CCEEETTTCCEECGGGGTT--CCGGGSCTTCBCTTTCCB
T ss_pred             CEEECCCCCeEEeCCcCCC--cchhhCCCCCcCcCCCCc
Confidence            4688999988776332110  011111223788888753

>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}

Probab=86.42  E-value=0.66  Score=22.49  Aligned_cols=30  Identities=23%  Similarity=0.462  Sum_probs=19.0

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      .|.|+.|++.-..          -.+...|.|..|++.|.
T Consensus        26 ky~C~fCgk~~vk----------R~a~GIW~C~~C~~~~A   55 (72)
T 3jyw_9           26 RYDCSFCGKKTVK----------RGAAGIWTCSCCKKTVA   55 (72)
T ss_dssp             CBCCSSCCSSCBS----------BCSSSCBCCSSSCCCCC
T ss_pred             CccCCCCCCceeE----------ecCCCeEECCCCCCEEe
Confidence            6778888854211          12345688888887765

>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...

Probab=85.88  E-value=0.21  Score=24.95  Aligned_cols=30  Identities=30%  Similarity=0.688  Sum_probs=17.9

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCCCCceeccccccccc
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFT   52 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   52 (99)
                      .|.|+.||.....          ..+...|.|+.|+..|.
T Consensus        27 ~y~Cp~CG~~~v~----------r~atGiW~C~~Cg~~~a   56 (83)
T 1vq8_Z           27 DHACPNCGEDRVD----------RQGTGIWQCSYCDYKFT   56 (83)
T ss_dssp             CEECSSSCCEEEE----------EEETTEEEETTTCCEEE
T ss_pred             cCcCCCCCCccee----------ccCCCeEECCCCCCEec
Confidence            6778888753211          11234678888887654

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=85.46  E-value=0.42  Score=20.28  Aligned_cols=13  Identities=23%  Similarity=0.652  Sum_probs=6.1

Q ss_pred             ceecccccccccC
Q psy16685         41 PHQCQVCGKRFTA   53 (99)
Q Consensus        41 ~~~C~~C~~~f~~   53 (99)
                      .+.|+.|+..+..
T Consensus         9 ~~~C~~C~~~i~~   21 (39)
T 2i5o_A            9 QVPCEKCGSLVPV   21 (39)
T ss_dssp             EEECTTTCCEEEG
T ss_pred             CcccccccCcCCc
Confidence            3445555544443

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=85.23  E-value=0.55  Score=22.61  Aligned_cols=10  Identities=30%  Similarity=0.876  Sum_probs=5.3

Q ss_pred             eecccCcCcC
Q psy16685         14 HVCSVCSKGF   23 (99)
Q Consensus        14 ~~C~~c~~~~   23 (99)
                      |.|..||..|
T Consensus        29 Y~C~~CG~~~   38 (70)
T 1twf_L           29 YICAECSSKL   38 (70)
T ss_dssp             EECSSSCCEE
T ss_pred             EECCCCCCcc
Confidence            4555555544

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=84.92  E-value=0.4  Score=23.00  Aligned_cols=48  Identities=21%  Similarity=0.462  Sum_probs=30.3

Q ss_pred             CCeec-ccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHH
Q psy16685         12 KPHVC-SVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHR   61 (99)
Q Consensus        12 ~~~~C-~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   61 (99)
                      .+..| ..|+..+.. ..+..|....-..++..|..|+..+... .|..|.
T Consensus        15 ~~v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~~~-~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFSGE-AYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCCHH-HHHHTT
T ss_pred             cccCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCccCHH-HHHHHH
Confidence            45668 578876654 4456666544445678899998877543 455553

>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z

Probab=84.35  E-value=0.2  Score=26.55  Aligned_cols=13  Identities=38%  Similarity=0.782  Sum_probs=8.2

Q ss_pred             Cceeccccccccc
Q psy16685         40 KPHQCQVCGKRFT   52 (99)
Q Consensus        40 ~~~~C~~C~~~f~   52 (99)
                      ..|.|..|++.|.
T Consensus        77 GIW~C~~Cgk~fA   89 (116)
T 3cc2_Z           77 GIWQCSYCDYKFT   89 (116)
T ss_dssp             TEEEETTTCCEEE
T ss_pred             eeEECCCCCCEEE
Confidence            3567777766654

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=83.74  E-value=0.52  Score=24.96  Aligned_cols=13  Identities=31%  Similarity=0.580  Sum_probs=7.7

Q ss_pred             CeecccCcCcCCC
Q psy16685         13 PHVCSVCSKGFST   25 (99)
Q Consensus        13 ~~~C~~c~~~~~~   25 (99)
                      .|.|..||..|..
T Consensus        73 ~~~C~~CG~~~e~   85 (119)
T 2kdx_A           73 ELECKDCSHVFKP   85 (119)
T ss_dssp             EEECSSSSCEECS
T ss_pred             eEEcCCCCCEEeC
Confidence            3566667666543

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=82.58  E-value=0.69  Score=21.06  Aligned_cols=21  Identities=24%  Similarity=0.512  Sum_probs=14.5

Q ss_pred             eecccCcCcCCChHHHHHHhh
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRR   34 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~   34 (99)
                      -.|..|+-.|.....++.|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            467777777777777766654

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=82.43  E-value=0.53  Score=26.66  Aligned_cols=11  Identities=18%  Similarity=0.621  Sum_probs=6.2

Q ss_pred             CeecccCcCcC
Q psy16685         13 PHVCSVCSKGF   23 (99)
Q Consensus        13 ~~~C~~c~~~~   23 (99)
                      .|.|..||.++
T Consensus       138 ~~~C~~CG~i~  148 (170)
T 3pwf_A          138 VYICPICGYTA  148 (170)
T ss_dssp             EEECTTTCCEE
T ss_pred             eeEeCCCCCee
Confidence            45566666544

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=81.07  E-value=0.8  Score=26.78  Aligned_cols=27  Identities=22%  Similarity=0.428  Sum_probs=22.4

Q ss_pred             CCceecccccccccC-cchHHHHHHhcc
Q psy16685         39 EKPHQCQVCGKRFTA-SSNLYYHRMTHI   65 (99)
Q Consensus        39 ~~~~~C~~C~~~f~~-~~~l~~H~~~h~   65 (99)
                      ..|..|..|+..|.. ...|+.|...|.
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHH
Confidence            357899999999986 899999988664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	99
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-13
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-12
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-11
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-11
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-10
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-10
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-10
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-10
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	7e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	7e-10
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-09
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-08
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-09
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-09
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-08
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	9e-08
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-07
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-07
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	7e-07
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	1e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	1e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	3e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-04
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-04
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	6e-04
d1ubdc2	28	g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger	7e-04
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	0.002
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	0.003
d2dmda1	28	g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {	0.002

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (137), Expect = 3e-13
 Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 10 SEKPHVCSVCSKGFSTSSSLNTH-RRIHSGEKPHQCQV 46
            KP++C  C KGFS    LN H +++H+ E+PH+CQV
Sbjct: 2  VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 8e-07
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 37 SGEKPHQCQVCGKRFTASSNLYYH-RMTH 64
          S  KP+ CQ CGK F+   +L  H +  H
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 4e-12
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          +K + C  C K F+  S  + H  +H G +P+ C VCGK+F    +L  H   H
Sbjct: 1  DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 7e-04
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 5  LRVLISEKPHVCSVCSKGFSTSSSLNTHRRIH 36
          + + +  +P+ C VC K F     L  H +IH
Sbjct: 22 MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.0 bits (125), Expect = 2e-11
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV 67
            R  +G KP QC  C + F+ S +L  HR  H+ V
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 1e-05
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIH 36
           KP  C  C + FS S  L  HR+ H
Sbjct: 9  IKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (122), Expect = 5e-11
 Identities = 17/30 (56%), Positives = 20/30 (66%)

Query: 35 IHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          IHSGEKP+ C  CGK F+ SS L  H+  H
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (117), Expect = 2e-10
 Identities = 16/29 (55%), Positives = 20/29 (68%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE 39
          EKP+ C  C K FS SS L  H+R+H+GE
Sbjct: 5  EKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (119), Expect = 1e-10
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          R HSGEKP++C +C  RFT S  +  H +  
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 5e-07
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTH-RRIHSGE 39
          EKP+ C +C   F+ S ++  H  + H+  
Sbjct: 6  EKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (118), Expect = 2e-10
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
          R H+GEKP+ C  C K F     L  H   +
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 3e-08
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 6  RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          R    EKP+ CS C K F     L+ H + +    
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 48.0 bits (115), Expect = 5e-10
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          +  VC VC++ F+    L  H R H+ EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.9 bits (94), Expect = 7e-07
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 40 KPHQCQVCGKRFTASSNLYYHRMTH 64
          +   C+VC + F    +L  H  +H
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSH 25

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (114), Expect = 7e-10
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
                  + ++C  CGK F+ SS+L  HR TH
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 5e-07
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE 39
           + + C  C K FS SS L+ HRR H+GE
Sbjct: 10 RRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.8 bits (112), Expect = 2e-09
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSG 38
          +KP  C +C + FS S  L TH R H+G
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (100), Expect = 8e-08
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 39 EKPHQCQVCGKRFTASSNLYYHRMTH 64
          +KP QC++C + F+ S +L  H  TH
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 5e-09
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          K   C  C K F  S  L+ H + H  +K
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 5e-06
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 40 KPHQCQVCGKRFTASSNLYYHRMTH 64
          K   C  C KRF  S +L  H  TH
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTH 25

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (107), Expect = 7e-09
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 16 CSVCSKGFSTSSSLNTHRRIHSGEKPHQCQ 45
             C K F+    L  H ++HS  + + C+
Sbjct: 6  EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (104), Expect = 2e-08
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 12 KPHVCSV--CSKGFSTSSSLNTHRRIHSGEK 40
          +P +C+   C K F+ S  L  H+R H+GEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 1e-04
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 40 KPHQCQV--CGKRFTASSNLYYHRMTH 64
          +P  C    CGKRFT S  L  H+ TH
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.4 bits (100), Expect = 9e-08
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 36 HSGEKPHQCQVCGKRFTASSNLYYHRMTH 64
           SG++P  C++C   FT  +N   H   H
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 3e-06
 Identities = 8/29 (27%), Positives = 17/29 (58%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE 39
          ++P VC +C   F+T ++   H ++H+  
Sbjct: 5  KRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 1e-07
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 12 KPHVCSV--CSKGFSTSSSLNTHRRIHSGE 39
          KPH C+   C K +S   +L TH R H+GE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 40 KPHQC--QVCGKRFTASSNLYYHRMTH 64
          KPH+C  + C K ++   NL  H  +H
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.5 bits (98), Expect = 2e-07
 Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSGE 39
          ++P+ C    C K F  +  L  H++ H  +
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (86), Expect = 1e-05
 Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 39 EKPHQCQV--CGKRFTASSNLYYHRMTHIK 66
          ++P+ C    C K F  + +L  H+ +H +
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (94), Expect = 7e-07
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHS 37
          KP+ C  C K FS +S L  H+RIH+
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (86), Expect = 1e-05
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 40 KPHQCQVCGKRFTASSNLYYHRMTH 64
          KP++C  CGK F+ +S L  H+  H
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIH 25

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 12 KPHVCSV--CSKGFSTSSSLNTHRRIHSGE 39
          KP  C+   C K FS   +L TH RIH+G+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 4e-04
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 40 KPHQCQV--CGKRFTASSNLYYHRMTH 64
          KP QC    CGKRF+   NL  H   H
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.2 bits (92), Expect = 1e-06
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 12 KPHVCSV--CSKGFSTSSSLNTHRRIHSG 38
          +P+ C V  C + FS S+ L  H RIH+G
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 40 KPHQC--QVCGKRFTASSNLYYHRMTH 64
          +P+ C  + C +RF+ S++L  H   H
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (84), Expect = 2e-05
 Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 3/40 (7%)

Query: 27 SSLNTHRRIHSGEKPHQCQVC--GKRFTASSNLYYHRMTH 64
           S++ + +    +K  +C      K F    N+  H  TH
Sbjct: 5  GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.7 bits (82), Expect = 5e-05
 Identities = 5/32 (15%), Positives = 12/32 (37%), Gaps = 2/32 (6%)

Query: 11 EKPHVCSVCSKG--FSTSSSLNTHRRIHSGEK 40
          +K   C        F    ++ +H + H  ++
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-05
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 12 KPHVCSV--CSKGFSTSSSLNTHRRIHS 37
          +P+VC    C+K F+ S++L +H   H+
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 40 KPHQCQV--CGKRFTASSNLYYHRMTH 64
          +P+ C    C K+F  S+NL  H +TH
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 33.9 bits (78), Expect = 2e-04
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEK 40
          + + CS C + F ++ +L  H  +H  ++
Sbjct: 4  RSYTCSFCKREFRSAQALGGHMNVHRRDR 32

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 6e-04
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPH 42
          K   C +C K F     LN H+  HSGEKP+
Sbjct: 4  KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 7e-04
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 14 HVCSVCSKGFSTSSSLNTHRRIHSGE 39
          HVC+ C K F  SS L  H+ +H+GE
Sbjct: 3  HVCAECGKAFVESSKLKRHQLVHTGE 28

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 30.9 bits (70), Expect = 0.002
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 11 EKPHVCSVCSKGFSTSSSLNTHRRIH 36
          EKP  C +C + F+ S     H +IH
Sbjct: 1  EKPFACDICGRKFARSDERKRHTKIH 26

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 30.6 bits (69), Expect = 0.003
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 39 EKPHQCQVCGKRFTASSNLYYHRMTHIK 66
          EKP  C +CG++F  S     H   H++
Sbjct: 1  EKPFACDICGRKFARSDERKRHTKIHLR 28

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.9 bits (69), Expect = 0.002
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 12 KPHVCSVCSKGFSTSSSLNTHRRIHS 37
          KP+ C  C    + SSSLN H RIHS
Sbjct: 2  KPYKCKTCDYAAADSSSLNKHLRIHS 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	99
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.8
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.57
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.51
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.5
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.5
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.49
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.48
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.47
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.44
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.43
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.43
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.36
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.35
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.33
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.33
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.31
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.31
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.3
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.29
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.25
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.25
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.23
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.21
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.17
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.1
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.09
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.08
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.08
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.06
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.98
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.93
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.9
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.85
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.82
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.77
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.73
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.64
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.59
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.59
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.51
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.42
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.41
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.35
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.35
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.17
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.13
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.1
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.09
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.08
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.03
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.93
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.92
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.86
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.85
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.83
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.79
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.72
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.71
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.7
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.66
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.56
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.55
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.54
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.53
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.52
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.48
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.48
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.39
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.38
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.33
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.33
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.3
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.27
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.22
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.19
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.19
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.17
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.15
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.13
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.1
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.99
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.97
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.82
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.66
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	96.52
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.33
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.32
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.32
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.23
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.18
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.7
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.65
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.34
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.76
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.55
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.54
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.29
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.69
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.69
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.55
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.14
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.93
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.26
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.18
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.78
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	88.26
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	87.01
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	86.76
d1twfl_	46	RBP12 subunit of RNA polymerase II {Baker's yeast	86.2
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.97
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	85.5
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	83.77
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	83.24
d1fu9a_	36	U-shaped transcription factor, different fingers {	83.18
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.05

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.3e-20  Score=86.67  Aligned_cols=53  Identities=36%  Similarity=0.689  Sum_probs=50.9

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccCcchHHHHHHhc
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      |+||.| .||+.|.....|..|+++|++++||.|..|++.|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 59999999999999999999999999999999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6.3e-16  Score=66.36  Aligned_cols=37  Identities=38%  Similarity=0.558  Sum_probs=27.9

Q ss_pred             ehhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685          3 YILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus         3 ~h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +|+++|++++||.|.+||++|...+.|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5777777777777777777777777777777777764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.2e-15  Score=65.52  Aligned_cols=37  Identities=32%  Similarity=0.523  Sum_probs=35.2

Q ss_pred             HHhhhcCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685         31 THRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        31 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +|+.+|++++||.|..||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4788999999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=8.3e-15  Score=62.40  Aligned_cols=35  Identities=34%  Similarity=0.493  Sum_probs=25.0

Q ss_pred             hhhhhcCCCCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685          4 ILRVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus         4 h~~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      |.|+|++++||.|.+|++.|..+..|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56777777777777777777777777777776653

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.6e-15  Score=68.76  Aligned_cols=51  Identities=22%  Similarity=0.218  Sum_probs=47.8

Q ss_pred             CCceecccccccccCcchHHHHHHhccCCCcchhhhccccccCCCcchhhhh
Q psy16685         39 EKPHQCQVCGKRFTASSNLYYHRMTHIKVNDDFKEILNLEPVSGSNDEKNLN   90 (99)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (99)
                      ++||.|. ||+.|.....|..|+++|++++||.|..|+..+...+.+..|+.
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            5899995 99999999999999999999999999999999999998888864

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=7.4e-15  Score=60.74  Aligned_cols=31  Identities=48%  Similarity=0.781  Sum_probs=15.5

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      |++++||.|.+||++|...+.|..|+++|+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4455555555555555555555555554444

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.4e-14  Score=59.93  Aligned_cols=33  Identities=52%  Similarity=0.785  Sum_probs=31.5

Q ss_pred             hcCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685         35 IHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        35 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +|++++||+|..|+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            489999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.9e-14  Score=61.64  Aligned_cols=35  Identities=49%  Similarity=1.071  Sum_probs=18.9

Q ss_pred             CCCeecccCcCcCCChHHHHHHhh-hcCCCCceecc
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRR-IHSGEKPHQCQ   45 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~-~~~~~~~~~C~   45 (99)
                      ++||.|.+||+.|.....|..|++ +|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            455555555555555555555543 45555555553

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2e-14  Score=61.57  Aligned_cols=37  Identities=30%  Similarity=0.444  Sum_probs=33.7

Q ss_pred             CCCceecccccccccCcchHHHHHH-hccCCCcchhhh
Q psy16685         38 GEKPHQCQVCGKRFTASSNLYYHRM-THIKVNDDFKEI   74 (99)
Q Consensus        38 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~~   74 (99)
                      .++||.|..||+.|...++|..|++ +|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3689999999999999999999976 799999999863

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=4.6e-14  Score=59.65  Aligned_cols=33  Identities=33%  Similarity=0.527  Sum_probs=17.8

Q ss_pred             hhhcCCCCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685          6 RVLISEKPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus         6 ~~h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      |+|+|++||.|.+|+++|.....|..|+++|++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            345555555555555555555555555555543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=2.1e-14  Score=61.14  Aligned_cols=35  Identities=37%  Similarity=0.667  Sum_probs=33.2

Q ss_pred             HhhhcCCCCceecccccccccCcchHHHHHHhccC
Q psy16685         32 HRRIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        32 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      |.++|++++||+|..|++.|...++|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4.3e-14  Score=59.76  Aligned_cols=34  Identities=35%  Similarity=0.539  Sum_probs=32.0

Q ss_pred             hhcCCCCceecccccccccCcchHHHHHHhccCC
Q psy16685         34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ++|+|++||+|..|+++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4799999999999999999999999999999865

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=2.5e-13  Score=56.76  Aligned_cols=30  Identities=33%  Similarity=0.659  Sum_probs=15.8

Q ss_pred             CCCCceecccccccccCcchHHHHHHhccC
Q psy16685         37 SGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      +|++||+|..|++.|...++|..|+++|+.
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCC
Confidence            445555555555555555555555555543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.35  E-value=1.8e-13  Score=54.97  Aligned_cols=29  Identities=24%  Similarity=0.557  Sum_probs=17.8

Q ss_pred             CceecccccccccCcchHHHHHHhccCCC
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      +||.|..|++.|...+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35666666666666666666666666653

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=5.4e-13  Score=55.72  Aligned_cols=32  Identities=25%  Similarity=0.666  Sum_probs=30.3

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      |+|++||.|.+|++.|.....|..|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.6e-13  Score=54.00  Aligned_cols=29  Identities=38%  Similarity=0.551  Sum_probs=19.0

Q ss_pred             CceecccccccccCcchHHHHHHhccCCC
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      +||.|..|++.|...+.|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46666666666666666666666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5.9e-13  Score=56.10  Aligned_cols=27  Identities=30%  Similarity=0.603  Sum_probs=13.9

Q ss_pred             hhcCCCCeecccCcCcCCChHHHHHHh
Q psy16685          7 VLISEKPHVCSVCSKGFSTSSSLNTHR   33 (99)
Q Consensus         7 ~h~~~~~~~C~~c~~~~~~~~~l~~h~   33 (99)
                      +|+|++||.|+.|++.|..+..|..|+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~   28 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHI   28 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHc
Confidence            445555555555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5e-13  Score=56.32  Aligned_cols=33  Identities=42%  Similarity=0.787  Sum_probs=29.4

Q ss_pred             hhcCCCCceecccccccccCcchHHHHHHhccC
Q psy16685         34 RIHSGEKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        34 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      ++|+|++||.|+.|++.|...++|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            479999999999999999999999999875443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=4.3e-13  Score=53.29  Aligned_cols=27  Identities=41%  Similarity=0.755  Sum_probs=15.1

Q ss_pred             CceecccccccccCcchHHHHHHhccC
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      +||+|..|++.|...+.|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            455555555555555555555555543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.29  E-value=2.4e-13  Score=60.58  Aligned_cols=40  Identities=25%  Similarity=0.451  Sum_probs=32.3

Q ss_pred             HHHHHhhhcCCCCceeccc--ccccccCcchHHHHHHhccCCC
Q psy16685         28 SLNTHRRIHSGEKPHQCQV--CGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        28 ~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      .+..|+. |++++||.|..  |++.|...++|..|+++|+|++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3455664 88889999966  9999999999999999998875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.25  E-value=2.6e-12  Score=51.48  Aligned_cols=29  Identities=38%  Similarity=0.830  Sum_probs=27.5

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      +||.|++|++.|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999975

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=1.5e-12  Score=51.65  Aligned_cols=28  Identities=46%  Similarity=0.937  Sum_probs=26.7

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      |+||.|.+|++.|..++.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.23  E-value=8.3e-13  Score=58.82  Aligned_cols=38  Identities=18%  Similarity=0.400  Sum_probs=34.2

Q ss_pred             eehhhhhcCCCCeeccc--CcCcCCChHHHHHHhhhcCCCC
Q psy16685          2 IYILRVLISEKPHVCSV--CSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus         2 ~~h~~~h~~~~~~~C~~--c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      .+|+ .|++++||.|..  |++.|...+.|..|+++|+|++
T Consensus         8 ~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4566 499999999977  9999999999999999999974

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=5.4e-12  Score=50.47  Aligned_cols=29  Identities=34%  Similarity=0.647  Sum_probs=27.4

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      +||.|++|++.|..++.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999874

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=4.1e-12  Score=49.26  Aligned_cols=25  Identities=44%  Similarity=0.849  Sum_probs=13.9

Q ss_pred             CceecccccccccCcchHHHHHHhc
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h   64 (99)
                      +||+|..||++|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3555555555555555555555554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.5e-11  Score=47.63  Aligned_cols=26  Identities=50%  Similarity=0.873  Sum_probs=24.5

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      +||.|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999884

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.8e-11  Score=49.19  Aligned_cols=28  Identities=36%  Similarity=0.682  Sum_probs=16.6

Q ss_pred             Cceeccc--ccccccCcchHHHHHHhccCC
Q psy16685         40 KPHQCQV--CGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +||.|+.  |+++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3556644  666666666666666666554

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.5e-11  Score=51.59  Aligned_cols=26  Identities=31%  Similarity=0.432  Sum_probs=12.9

Q ss_pred             ccccccCcchHHHHHHhccCCCcchh
Q psy16685         47 CGKRFTASSNLYYHRMTHIKVNDDFK   72 (99)
Q Consensus        47 C~~~f~~~~~l~~H~~~h~~~~~~~~   72 (99)
                      |++.|.+.+.|++|+++|++++||.|
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeC
Confidence            44555555555555555555554443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.5e-11  Score=50.90  Aligned_cols=32  Identities=28%  Similarity=0.666  Sum_probs=30.0

Q ss_pred             eeccc--CcCcCCChHHHHHHhhhcCCCCceecc
Q psy16685         14 HVCSV--CSKGFSTSSSLNTHRRIHSGEKPHQCQ   45 (99)
Q Consensus        14 ~~C~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~   45 (99)
                      |.|+.  |++.|.....|..|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  999999999999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2e-11  Score=49.14  Aligned_cols=28  Identities=46%  Similarity=0.752  Sum_probs=18.3

Q ss_pred             Cceeccc--ccccccCcchHHHHHHhccCC
Q psy16685         40 KPHQCQV--CGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +||.|+.  |+++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4666644  677777777777777666664

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.1e-11  Score=48.94  Aligned_cols=29  Identities=45%  Similarity=0.819  Sum_probs=16.9

Q ss_pred             Cceecc--cccccccCcchHHHHHHhccCCC
Q psy16685         40 KPHQCQ--VCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        40 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      +||.|+  .|++.|...++|.+|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            355553  46666666666666666666553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=2.3e-10  Score=45.90  Aligned_cols=28  Identities=50%  Similarity=0.962  Sum_probs=26.2

Q ss_pred             CCeeccc--CcCcCCChHHHHHHhhhcCCC
Q psy16685         12 KPHVCSV--CSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        12 ~~~~C~~--c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +||.|..  |++.|..++.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899988  999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.8e-10  Score=45.71  Aligned_cols=28  Identities=50%  Similarity=0.942  Sum_probs=26.0

Q ss_pred             CCeeccc--CcCcCCChHHHHHHhhhcCCC
Q psy16685         12 KPHVCSV--CSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        12 ~~~~C~~--c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +||.|+.  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999977  999999999999999999885

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=6.8e-10  Score=44.88  Aligned_cols=29  Identities=45%  Similarity=1.001  Sum_probs=26.5

Q ss_pred             CCeecc--cCcCcCCChHHHHHHhhhcCCCC
Q psy16685         12 KPHVCS--VCSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus        12 ~~~~C~--~c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            589995  69999999999999999999974

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=3.9e-10  Score=44.83  Aligned_cols=27  Identities=37%  Similarity=0.752  Sum_probs=15.0

Q ss_pred             Cceeccc--ccccccCcchHHHHHHhccC
Q psy16685         40 KPHQCQV--CGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   66 (99)
                      +||.|..  |++.|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3555533  55666666666666555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=1.3e-09  Score=44.26  Aligned_cols=27  Identities=30%  Similarity=0.714  Sum_probs=15.8

Q ss_pred             Cceeccc--ccccccCcchHHHHHHhccC
Q psy16685         40 KPHQCQV--CGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   66 (99)
                      +||.|..  |++.|.+.+.|.+|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            4566644  66666666666666666553

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.1e-09  Score=43.10  Aligned_cols=26  Identities=42%  Similarity=0.830  Sum_probs=18.3

Q ss_pred             Cceeccc--ccccccCcchHHHHHHhcc
Q psy16685         40 KPHQCQV--CGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~l~~H~~~h~   65 (99)
                      +||.|+.  |++.|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677754  7777777777777777764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=1.7e-09  Score=42.89  Aligned_cols=27  Identities=48%  Similarity=0.995  Sum_probs=25.0

Q ss_pred             CCeeccc--CcCcCCChHHHHHHhhhcCC
Q psy16685         12 KPHVCSV--CSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        12 ~~~~C~~--c~~~~~~~~~l~~h~~~~~~   38 (99)
                      +||.|..  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999977  99999999999999999976

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.73  E-value=6.6e-09  Score=42.11  Aligned_cols=28  Identities=29%  Similarity=0.697  Sum_probs=26.0

Q ss_pred             CCCeeccc--CcCcCCChHHHHHHhhhcCC
Q psy16685         11 EKPHVCSV--CSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        11 ~~~~~C~~--c~~~~~~~~~l~~h~~~~~~   38 (99)
                      ++||.|..  |++.|.....|..|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            68999987  99999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=5.4e-09  Score=41.03  Aligned_cols=26  Identities=38%  Similarity=0.832  Sum_probs=24.0

Q ss_pred             CCeeccc--CcCcCCChHHHHHHhhhcC
Q psy16685         12 KPHVCSV--CSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        12 ~~~~C~~--c~~~~~~~~~l~~h~~~~~   37 (99)
                      +||.|+.  |++.|.....|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899977  9999999999999999885

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=1.5e-08  Score=38.63  Aligned_cols=26  Identities=35%  Similarity=0.853  Sum_probs=15.3

Q ss_pred             CceecccccccccCcchHHHHHHhcc
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      +||.|..||+.|......++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            55666666666666666666655553

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=2.6e-08  Score=36.79  Aligned_cols=26  Identities=54%  Similarity=1.013  Sum_probs=15.0

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcCC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      |+.|..|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566666666666666666655543

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2e-08  Score=37.06  Aligned_cols=26  Identities=42%  Similarity=0.852  Sum_probs=23.8

Q ss_pred             ceecccccccccCcchHHHHHHhccC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      |.+|+.|++.|+++..|.-|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46899999999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=6.7e-08  Score=36.77  Aligned_cols=27  Identities=37%  Similarity=0.847  Sum_probs=24.8

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      ++||.|..||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999998874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=5.5e-08  Score=38.38  Aligned_cols=29  Identities=28%  Similarity=0.576  Sum_probs=15.9

Q ss_pred             eecccccccccCcchHHHHHHhccCCCcc
Q psy16685         42 HQCQVCGKRFTASSNLYYHRMTHIKVNDD   70 (99)
Q Consensus        42 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   70 (99)
                      ..|..||+.|..-..|.+|.-.|.+|+||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34555555555555555555555555554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=9e-08  Score=36.94  Aligned_cols=28  Identities=39%  Similarity=0.767  Sum_probs=18.6

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      ++||.|++|+..|..+.....|.++|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4566777777777766666666666655

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=1.1e-07  Score=37.51  Aligned_cols=32  Identities=44%  Similarity=0.726  Sum_probs=29.3

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCcee
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQ   43 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~   43 (99)
                      +...|..||+.|.....|.+|.-.|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            46789999999999999999999999999983

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.3e-07  Score=35.73  Aligned_cols=27  Identities=33%  Similarity=0.579  Sum_probs=17.0

Q ss_pred             CceecccccccccCcchHHHHHHhccC
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      +||+|..|.......+.|..|.+.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            466666666666666666666666655

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=2.8e-07  Score=34.59  Aligned_cols=25  Identities=48%  Similarity=0.975  Sum_probs=16.2

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCC
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      +.|.+||+.|...+.|++|+-+|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4566666666666666666666655

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.5e-07  Score=36.33  Aligned_cols=29  Identities=41%  Similarity=0.779  Sum_probs=26.4

Q ss_pred             CCceecccccccccCcchHHHHHHhccCC
Q psy16685         39 EKPHQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ++||.|+.|...|.++.-+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            48999999999999999999999998763

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3.4e-07  Score=34.34  Aligned_cols=26  Identities=42%  Similarity=0.764  Sum_probs=23.9

Q ss_pred             eecccccccccCcchHHHHHHhccCC
Q psy16685         42 HQCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        42 ~~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ..|..||+.|...+.|++|+-+|++|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46999999999999999999999875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.4e-06  Score=32.81  Aligned_cols=29  Identities=38%  Similarity=0.773  Sum_probs=26.1

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      ++||+|..|...-...+.|..|.+.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999989999999999999873

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=8.9e-07  Score=32.73  Aligned_cols=25  Identities=28%  Similarity=0.541  Sum_probs=13.9

Q ss_pred             ecccccccccCcchHHHHHHhccCC
Q psy16685         43 QCQVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        43 ~C~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +|+.|.+.|.++..|+.|-+.|+||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=2.2e-06  Score=32.39  Aligned_cols=26  Identities=27%  Similarity=0.474  Sum_probs=15.3

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      |.|+.|+.....++.|+.|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45666666666666666666666553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.08  E-value=1.8e-06  Score=31.43  Aligned_cols=23  Identities=35%  Similarity=0.868  Sum_probs=16.5

Q ss_pred             eecccCcCcCCChHHHHHHhhhc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIH   36 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~   36 (99)
                      |.|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            46777777777777777777765

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.8e-06  Score=32.62  Aligned_cols=27  Identities=37%  Similarity=0.489  Sum_probs=25.1

Q ss_pred             eecccccccccCcchHHHHHHhccCCC
Q psy16685         42 HQCQVCGKRFTASSNLYYHRMTHIKVN   68 (99)
Q Consensus        42 ~~C~~C~~~f~~~~~l~~H~~~h~~~~   68 (99)
                      |.|+.|+.....++-|+.|.+.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=5.8e-06  Score=30.47  Aligned_cols=26  Identities=42%  Similarity=0.778  Sum_probs=24.0

Q ss_pred             ecccCcCcCCChHHHHHHhhhcCCCC
Q psy16685         15 VCSVCSKGFSTSSSLNTHRRIHSGEK   40 (99)
Q Consensus        15 ~C~~c~~~~~~~~~l~~h~~~~~~~~   40 (99)
                      +|+.|.+.|.++..|+.|.+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999999874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=5.1e-06  Score=31.55  Aligned_cols=24  Identities=50%  Similarity=0.548  Sum_probs=15.9

Q ss_pred             CceecccccccccCcchHHHHHHh
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      +||+|..|.......++|+.|.++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            466666666666666667666665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=5.1e-06  Score=31.87  Aligned_cols=24  Identities=42%  Similarity=0.638  Sum_probs=12.0

Q ss_pred             ceecc--cccccccCcchHHHHHHhc
Q psy16685         41 PHQCQ--VCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        41 ~~~C~--~C~~~f~~~~~l~~H~~~h   64 (99)
                      ||.|.  .|++++..++.|+.|++.+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhh
Confidence            44443  2555555555555555543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.85  E-value=7.7e-06  Score=33.56  Aligned_cols=25  Identities=28%  Similarity=0.707  Sum_probs=14.5

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      .|.|..|++.|.+...|-.|++.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            4556666666666666655555553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.83  E-value=3.7e-06  Score=30.55  Aligned_cols=24  Identities=29%  Similarity=0.609  Sum_probs=21.9

Q ss_pred             eecccccccccCcchHHHHHHhcc
Q psy16685         42 HQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        42 ~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=1.2e-05  Score=30.83  Aligned_cols=27  Identities=41%  Similarity=0.826  Sum_probs=23.4

Q ss_pred             CCeeccc--CcCcCCChHHHHHHhhhcCC
Q psy16685         12 KPHVCSV--CSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        12 ~~~~C~~--c~~~~~~~~~l~~h~~~~~~   38 (99)
                      +||.|..  |+++++.+++|..|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5899966  99999999999999987553

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.3e-05  Score=29.83  Aligned_cols=26  Identities=35%  Similarity=0.533  Sum_probs=14.7

Q ss_pred             CceecccccccccCcchHHHHHHhcc
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      +|++|..|...-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            45555555555555555666655553

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=1.1e-05  Score=30.36  Aligned_cols=25  Identities=40%  Similarity=0.717  Sum_probs=16.8

Q ss_pred             Cceecc--cccccccCcchHHHHHHhc
Q psy16685         40 KPHQCQ--VCGKRFTASSNLYYHRMTH   64 (99)
Q Consensus        40 ~~~~C~--~C~~~f~~~~~l~~H~~~h   64 (99)
                      .||.|+  .|++.|..++.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            366664  5777777777777776655

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.70  E-value=1.5e-05  Score=32.67  Aligned_cols=31  Identities=19%  Similarity=0.389  Sum_probs=27.2

Q ss_pred             CCceecccccccccCcchHHHHHHhccCCCc
Q psy16685         39 EKPHQCQVCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      .+.|.|..|++.|.+..+|--|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3569999999999999999999999976654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.9e-05  Score=30.51  Aligned_cols=27  Identities=37%  Similarity=0.664  Sum_probs=18.2

Q ss_pred             Cceeccc--ccccccCcchHHHHH-HhccC
Q psy16685         40 KPHQCQV--CGKRFTASSNLYYHR-MTHIK   66 (99)
Q Consensus        40 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~   66 (99)
                      +||.|..  |.+.|...+....|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4677743  777777777777776 55543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.56  E-value=1.9e-05  Score=30.49  Aligned_cols=22  Identities=32%  Similarity=0.661  Sum_probs=11.5

Q ss_pred             ceecccccccccCcchHHHHHH
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~   62 (99)
                      ||.|..|++.|.+.+.|.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            4555555555555555555543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=4.3e-05  Score=31.58  Aligned_cols=23  Identities=35%  Similarity=0.700  Sum_probs=11.5

Q ss_pred             CCCCeecccCcCcCCChHHHHHH
Q psy16685         10 SEKPHVCSVCSKGFSTSSSLNTH   32 (99)
Q Consensus        10 ~~~~~~C~~c~~~~~~~~~l~~h   32 (99)
                      |-+||.|..|++.|--..++.+|
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHh
Confidence            34455555555555544444444

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=5.8e-05  Score=28.03  Aligned_cols=27  Identities=52%  Similarity=0.753  Sum_probs=24.4

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      .+||.|..|...-...++|..|+++|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            379999999999999999999999885

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.3e-05  Score=29.56  Aligned_cols=23  Identities=30%  Similarity=0.606  Sum_probs=20.2

Q ss_pred             ceecccccccccCcchHHHHHHh
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      ||.|..|..+|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68899999999999999999875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.52  E-value=3.9e-05  Score=29.60  Aligned_cols=26  Identities=35%  Similarity=0.769  Sum_probs=22.0

Q ss_pred             CeecccCcCcCCChHHHHHHhhh-cCC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRI-HSG   38 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~-~~~   38 (99)
                      ||.|.+|++.|....-|.+|... |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            79999999999999999999654 443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=3.3e-05  Score=31.90  Aligned_cols=26  Identities=35%  Similarity=0.722  Sum_probs=23.1

Q ss_pred             CCCCceecccccccccCcchHHHHHH
Q psy16685         37 SGEKPHQCQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus        37 ~~~~~~~C~~C~~~f~~~~~l~~H~~   62 (99)
                      +|.+||.|..|++.|--.+.+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46799999999999999999998865

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=3.7e-05  Score=31.29  Aligned_cols=27  Identities=41%  Similarity=0.823  Sum_probs=18.0

Q ss_pred             CCceec--ccccccccCcchHHHHHHhcc
Q psy16685         39 EKPHQC--QVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        39 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      ++||.|  +.|+..|.+...|..|+..|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            567777  557777777777777766553

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.39  E-value=5.1e-05  Score=28.61  Aligned_cols=26  Identities=38%  Similarity=0.843  Sum_probs=12.8

Q ss_pred             Ceeccc--CcCcCCChHHHHHHhhhcCC
Q psy16685         13 PHVCSV--CSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        13 ~~~C~~--c~~~~~~~~~l~~h~~~~~~   38 (99)
                      ||+|..  |.+.|.+...|.+|.-+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            445532  55555555555555444443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.38  E-value=4.9e-05  Score=28.14  Aligned_cols=23  Identities=35%  Similarity=0.741  Sum_probs=17.3

Q ss_pred             ceecccccccccCcchHHHHHHh
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      ||+|..||+.+-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57788888887777788777653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.33  E-value=0.0001  Score=27.64  Aligned_cols=25  Identities=40%  Similarity=0.764  Sum_probs=21.7

Q ss_pred             CCeecc--cCcCcCCChHHHHHHhhhc
Q psy16685         12 KPHVCS--VCSKGFSTSSSLNTHRRIH   36 (99)
Q Consensus        12 ~~~~C~--~c~~~~~~~~~l~~h~~~~   36 (99)
                      .||.|+  .|++.|..++.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            489995  4999999999999998776

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00013  Score=27.57  Aligned_cols=27  Identities=30%  Similarity=0.433  Sum_probs=23.6

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      +||.|..|.......++|+.|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            589999999999999999999887544

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=0.00013  Score=27.41  Aligned_cols=26  Identities=27%  Similarity=0.566  Sum_probs=13.4

Q ss_pred             ceecccccccccCcchHHHHHHhccC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      .|.|..|...|.+.-.|+.|+-.|+|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            34555555555555555555555544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.0001  Score=27.41  Aligned_cols=25  Identities=24%  Similarity=0.562  Sum_probs=16.8

Q ss_pred             ceecccccccccCcchHHHHHHhcc
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      |-+|+.|..+..++..|+.|.++|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4566677777777777777776664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00018  Score=26.99  Aligned_cols=25  Identities=28%  Similarity=0.631  Sum_probs=22.6

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      ||.|..|.-.|.++.+|..|+.+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            7999999999999999999988654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00018  Score=29.24  Aligned_cols=28  Identities=29%  Similarity=0.754  Sum_probs=24.3

Q ss_pred             CCCCeec--ccCcCcCCChHHHHHHhhhcC
Q psy16685         10 SEKPHVC--SVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        10 ~~~~~~C--~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      .++||.|  +.|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            5799999  679999999999998887763

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00012  Score=27.63  Aligned_cols=23  Identities=30%  Similarity=0.515  Sum_probs=14.0

Q ss_pred             ceecccccccccCcchHHHHHHh
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      ||+|..|.....+.++|..|++.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            56666666655666666666553

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.17  E-value=0.00017  Score=27.16  Aligned_cols=28  Identities=39%  Similarity=0.674  Sum_probs=24.3

Q ss_pred             Cceec--ccccccccCcchHHHHHHhccCC
Q psy16685         40 KPHQC--QVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        40 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      +||.|  ..|.+.|.+--.|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            57888  46999999999999999999875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.15  E-value=0.00032  Score=26.26  Aligned_cols=29  Identities=38%  Similarity=0.673  Sum_probs=25.9

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCCC
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGE   39 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~~   39 (99)
                      +..|.|..|...|...-.|..|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45789999999999999999999999874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=9.6e-05  Score=28.47  Aligned_cols=27  Identities=48%  Similarity=0.847  Sum_probs=22.2

Q ss_pred             CCeeccc--CcCcCCChHHHHHHh-hhcCC
Q psy16685         12 KPHVCSV--CSKGFSTSSSLNTHR-RIHSG   38 (99)
Q Consensus        12 ~~~~C~~--c~~~~~~~~~l~~h~-~~~~~   38 (99)
                      +||.|..  |.+.|+..+.-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5899976  999999998888886 77754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00013  Score=26.35  Aligned_cols=21  Identities=29%  Similarity=0.727  Sum_probs=13.9

Q ss_pred             ceecccccccccCcchHHHHH
Q psy16685         41 PHQCQVCGKRFTASSNLYYHR   61 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~   61 (99)
                      ||+|..|...|-.+..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.99  E-value=0.00029  Score=25.36  Aligned_cols=22  Identities=36%  Similarity=0.682  Sum_probs=20.2

Q ss_pred             CeecccCcCcCCChHHHHHHhh
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRR   34 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~   34 (99)
                      ||.|.-|...|-.+..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999998864

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00028  Score=30.11  Aligned_cols=25  Identities=28%  Similarity=0.589  Sum_probs=20.9

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      -+.|..|++.|+....|..|-..|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4679999999999999988877763

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00051  Score=25.82  Aligned_cols=27  Identities=30%  Similarity=0.592  Sum_probs=22.6

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~   38 (99)
                      +||.|..|.--....++|..|++..++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999998888888999999876443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.66  E-value=0.00081  Score=24.75  Aligned_cols=22  Identities=27%  Similarity=0.590  Sum_probs=19.4

Q ss_pred             CeecccCcCcCCChHHHHHHhh
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRR   34 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~   34 (99)
                      ||.|..||+.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7899999999999999988754

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.52  E-value=0.0012  Score=28.03  Aligned_cols=32  Identities=25%  Similarity=0.360  Sum_probs=25.9

Q ss_pred             CCCceecccccccccCcchHHHHHHhccCCCc
Q psy16685         38 GEKPHQCQVCGKRFTASSNLYYHRMTHIKVND   69 (99)
Q Consensus        38 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   69 (99)
                      ++.|..|+.|+.......+|.+|....+..+|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            45788899999888888999999887665555

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.00077  Score=28.70  Aligned_cols=27  Identities=33%  Similarity=0.535  Sum_probs=23.9

Q ss_pred             CceecccccccccCcchHHHHHHhccC
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      ..|.|..|++.|.....|+.|...|.-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            468999999999999999999988753

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0022  Score=23.67  Aligned_cols=25  Identities=44%  Similarity=0.802  Sum_probs=22.2

Q ss_pred             CeecccCcCcCCChHHHHHHhhhcC
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRIHS   37 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~~~   37 (99)
                      |-.|++|..+.+++..|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999988874

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0013  Score=25.76  Aligned_cols=26  Identities=27%  Similarity=0.493  Sum_probs=19.8

Q ss_pred             ceecccccccccCcchHHHHHHhccC
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      .|.|..|+++|.+...+.+|-...+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888765554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.00081  Score=26.60  Aligned_cols=18  Identities=33%  Similarity=0.523  Sum_probs=8.8

Q ss_pred             CcCCChHHHHHHhhhcCC
Q psy16685         21 KGFSTSSSLNTHRRIHSG   38 (99)
Q Consensus        21 ~~~~~~~~l~~h~~~~~~   38 (99)
                      +.|.....|..|+++|+|
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            344444555555555544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0019  Score=25.50  Aligned_cols=20  Identities=25%  Similarity=0.162  Sum_probs=17.0

Q ss_pred             cccccCcchHHHHHHhccCC
Q psy16685         48 GKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        48 ~~~f~~~~~l~~H~~~h~~~   67 (99)
                      ++.|.....|..|++.|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45678889999999999986

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.0031  Score=23.19  Aligned_cols=23  Identities=22%  Similarity=0.379  Sum_probs=19.4

Q ss_pred             ceecccccccccCcchHHHHHHh
Q psy16685         41 PHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        41 ~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      .|.|+.|+....+++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            37899999888899999988874

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.65  E-value=0.0052  Score=22.02  Aligned_cols=21  Identities=24%  Similarity=0.627  Sum_probs=12.7

Q ss_pred             eecccCcCcCCChHHHHHHhh
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRR   34 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~   34 (99)
                      |+|+.|-+.|..+.+...|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            556666666666666655544

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.34  E-value=0.0078  Score=23.27  Aligned_cols=23  Identities=30%  Similarity=0.652  Sum_probs=16.6

Q ss_pred             CeecccCcCcCCChHHHHHHhhh
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRRI   35 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~~   35 (99)
                      .|.|.-||..|.+.+.|..|+..
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            46677788888887777777653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.76  E-value=0.022  Score=24.00  Aligned_cols=28  Identities=29%  Similarity=0.546  Sum_probs=24.1

Q ss_pred             hcCCCCeecccCcCcCCChHHHHHHhhh
Q psy16685          8 LISEKPHVCSVCSKGFSTSSSLNTHRRI   35 (99)
Q Consensus         8 h~~~~~~~C~~c~~~~~~~~~l~~h~~~   35 (99)
                      ...+.|..|+.|+.+...+-+|.+|...
T Consensus        19 s~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          19 SQSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            3467899999999999999999998765

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.55  E-value=0.014  Score=22.03  Aligned_cols=27  Identities=22%  Similarity=0.360  Sum_probs=15.6

Q ss_pred             ceec--ccccccccCcchHHHHHHhccCC
Q psy16685         41 PHQC--QVCGKRFTASSNLYYHRMTHIKV   67 (99)
Q Consensus        41 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~   67 (99)
                      .|.|  +.|+..|.....|..|.-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3445  34666666666666666666553

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.54  E-value=0.01  Score=21.61  Aligned_cols=21  Identities=33%  Similarity=0.716  Sum_probs=13.2

Q ss_pred             ccccccccCcchHHHHHHhcc
Q psy16685         45 QVCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        45 ~~C~~~f~~~~~l~~H~~~h~   65 (99)
                      ..|++.|.....|+.|+-.|+
T Consensus         7 e~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           7 ENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TTCCCEESSHHHHHHHHHHHH
T ss_pred             cCchHHHhhccceEEEeeccc
Confidence            356677766666666665553

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.29  E-value=0.012  Score=27.07  Aligned_cols=22  Identities=41%  Similarity=0.714  Sum_probs=11.3

Q ss_pred             CeecccCcCcCCChHHHHHHhh
Q psy16685         13 PHVCSVCSKGFSTSSSLNTHRR   34 (99)
Q Consensus        13 ~~~C~~c~~~~~~~~~l~~h~~   34 (99)
                      .|.|..|++.|.+...|..|.+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3455555555555555555433

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.69  E-value=0.051  Score=21.72  Aligned_cols=26  Identities=35%  Similarity=0.878  Sum_probs=16.7

Q ss_pred             CCCeecccCcCcCCChHHHHHHhhhcCCCCceecccccc
Q psy16685         11 EKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGK   49 (99)
Q Consensus        11 ~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   49 (99)
                      ++-|.|..||..             +.++.|-.|+.|+.
T Consensus         3 ~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCE-------------EESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCE-------------eeCCCCCcCCCCCC
Confidence            345778888754             23455667888874

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.69  E-value=0.041  Score=24.83  Aligned_cols=38  Identities=18%  Similarity=0.461  Sum_probs=23.0

Q ss_pred             CCCCeecccCcCcCCChHHHHHHhhhcCCCCceeccccccc
Q psy16685         10 SEKPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKR   50 (99)
Q Consensus        10 ~~~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~   50 (99)
                      ...-|.|+.|++.|.....++.   .......|.|..|+..
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             cCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            3456788888888876654432   2222346778777643

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.55  E-value=0.04  Score=21.48  Aligned_cols=23  Identities=30%  Similarity=0.612  Sum_probs=14.3

Q ss_pred             CCCCeecccCcCcCCChHHHHHH
Q psy16685         10 SEKPHVCSVCSKGFSTSSSLNTH   32 (99)
Q Consensus        10 ~~~~~~C~~c~~~~~~~~~l~~h   32 (99)
                      ++..|.|..|.+.+...+++-+|
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRH   27 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRH   27 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHH
Confidence            34456666666666666666555

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.14  E-value=0.055  Score=21.76  Aligned_cols=26  Identities=35%  Similarity=0.818  Sum_probs=16.6

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceeccccccc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKR   50 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~   50 (99)
                      .-|.|..||..+             .+..|-.|+.|+..
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTTCCB
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCCCCc
Confidence            457788887543             34566778888743

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.93  E-value=0.025  Score=25.98  Aligned_cols=24  Identities=33%  Similarity=0.600  Sum_probs=21.2

Q ss_pred             CceecccccccccCcchHHHHHHh
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      ..|-|..|++.|.+...|..|.+.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            448899999999999999999874

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.26  E-value=0.2  Score=18.42  Aligned_cols=20  Identities=20%  Similarity=0.529  Sum_probs=13.4

Q ss_pred             eecccCcCcCCChHHHHHHh
Q psy16685         14 HVCSVCSKGFSTSSSLNTHR   33 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~   33 (99)
                      |.|..||+...+....+.|+
T Consensus         3 ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEE
Confidence            56777777777766666663

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.18  E-value=0.062  Score=19.69  Aligned_cols=20  Identities=35%  Similarity=0.389  Sum_probs=14.8

Q ss_pred             cccccccCcchHHHHHHhcc
Q psy16685         46 VCGKRFTASSNLYYHRMTHI   65 (99)
Q Consensus        46 ~C~~~f~~~~~l~~H~~~h~   65 (99)
                      .|.+.|...+.++.|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            57788888888888776653

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.088  Score=19.38  Aligned_cols=19  Identities=26%  Similarity=0.483  Sum_probs=12.1

Q ss_pred             ccccccccCcchHHHHHHh
Q psy16685         45 QVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        45 ~~C~~~f~~~~~l~~H~~~   63 (99)
                      +.|++.|+....|.-|.+.
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4567777766666666553

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.26  E-value=0.089  Score=23.70  Aligned_cols=28  Identities=21%  Similarity=0.468  Sum_probs=20.6

Q ss_pred             CCceecccccccccCcchHHHHHHhccC
Q psy16685         39 EKPHQCQVCGKRFTASSNLYYHRMTHIK   66 (99)
Q Consensus        39 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   66 (99)
                      ...|+|..|...|.+-..|..|...|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3457888888888887788888777653

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.01  E-value=0.29  Score=18.95  Aligned_cols=24  Identities=25%  Similarity=0.332  Sum_probs=17.0

Q ss_pred             CceecccccccccCcchHHHHHHh
Q psy16685         40 KPHQCQVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        40 ~~~~C~~C~~~f~~~~~l~~H~~~   63 (99)
                      +.|.|+.|.+-..+...+.+|+..
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHh
Confidence            557777777777777777777653

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.76  E-value=0.14  Score=25.46  Aligned_cols=11  Identities=55%  Similarity=1.229  Sum_probs=6.0

Q ss_pred             ceecccccccc
Q psy16685         41 PHQCQVCGKRF   51 (99)
Q Consensus        41 ~~~C~~C~~~f   51 (99)
                      |-.|..||+.|
T Consensus        67 Pp~CrkCGfvF   77 (105)
T d2gmga1          67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             ChhhhhcCCee
Confidence            44555555555

>d1twfl_ g.41.9.2 (L:) RBP12 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: RNA polymerase subunits
family: RBP12 subunit of RNA polymerase II
domain: RBP12 subunit of RNA polymerase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.20  E-value=0.3  Score=20.41  Aligned_cols=31  Identities=29%  Similarity=0.631  Sum_probs=21.5

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceecccccccccC
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRFTA   53 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   53 (99)
                      -.|.|..|+..+..+.           ..+..|..||.....
T Consensus         3 v~YiCgeCg~~~~l~~-----------~d~irCreCG~RIlY   33 (46)
T d1twfl_           3 LKYICAECSSKLSLSR-----------TDAVRCKDCGHRILL   33 (46)
T ss_dssp             CCEECSSSCCEECCCT-----------TSTTCCSSSCCCCCB
T ss_pred             eEEEcccCCCceEeCC-----------CCcEEeccCCcEEEE
Confidence            4688999987654322           357899999976543

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.97  E-value=0.33  Score=17.80  Aligned_cols=23  Identities=30%  Similarity=0.528  Sum_probs=15.8

Q ss_pred             ceec--ccccccccCcchHHHHHHh
Q psy16685         41 PHQC--QVCGKRFTASSNLYYHRMT   63 (99)
Q Consensus        41 ~~~C--~~C~~~f~~~~~l~~H~~~   63 (99)
                      .|.|  ..|...|.++.+++.|...
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhh
Confidence            3566  3577888888888777653

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=85.50  E-value=0.18  Score=20.17  Aligned_cols=30  Identities=3%  Similarity=0.075  Sum_probs=15.1

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF   51 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   51 (99)
                      +.|+.||..|-        +........-.|..||..+
T Consensus         3 ~vc~~cG~~Yh--------~~~~pPk~~g~CD~cg~~L   32 (37)
T d2ak3a2           3 WIHPGSGRVYN--------IEFNPPKTMGIDDLTGEPL   32 (37)
T ss_dssp             EEETTTTEEEE--------TTTBCCSSTTBCTTTCCBC
T ss_pred             eeeCCcCChhh--------hccCCccccCCccCCCCcC
Confidence            45666666652        2223333445666666443

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.77  E-value=0.35  Score=19.36  Aligned_cols=30  Identities=7%  Similarity=0.245  Sum_probs=15.2

Q ss_pred             eecccCcCcCCChHHHHHHhhhcCCCCceecccccccc
Q psy16685         14 HVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKRF   51 (99)
Q Consensus        14 ~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   51 (99)
                      ..|+.||..|-        +........-.|..|+..+
T Consensus         3 r~C~~cG~~Yh--------~~~~ppk~~g~CD~cg~~L   32 (38)
T d1akya2           3 LIHPASGRSYH--------KIFNPPKEDMKDDVTGEAL   32 (38)
T ss_dssp             EECTTTCCEEE--------TTTBCCSSTTBCTTTCCBC
T ss_pred             cCCcCccchhh--------hhccCcCcCCccCCCCCEe
Confidence            35677776652        2222333344666666543

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=83.24  E-value=0.24  Score=20.67  Aligned_cols=37  Identities=22%  Similarity=0.471  Sum_probs=20.0

Q ss_pred             CCeecccCcCcCCChHHHHHHhhhcCCCCceeccccccc
Q psy16685         12 KPHVCSVCSKGFSTSSSLNTHRRIHSGEKPHQCQVCGKR   50 (99)
Q Consensus        12 ~~~~C~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~   50 (99)
                      +.|.|..||..+.....-  -.....-..-|.|+.|+..
T Consensus         2 ~~y~C~~CgyiYd~~~Gd--gt~Fe~LP~dw~CP~C~a~   38 (45)
T d6rxna_           2 QKYVCNVCGYEYDPAEHD--NVPFDQLPDDWCCPVCGVS   38 (45)
T ss_dssp             CCEEETTTCCEECGGGGT--TCCGGGSCTTCBCTTTCCB
T ss_pred             CCeEeCCCCeEECcccCC--CCCHHHCCCCCCCcCCCCc
Confidence            358899998877543210  0001111134788888743

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.18  E-value=0.45  Score=18.57  Aligned_cols=19  Identities=21%  Similarity=0.551  Sum_probs=11.0

Q ss_pred             cccccccccCcchHHHHHH
Q psy16685         44 CQVCGKRFTASSNLYYHRM   62 (99)
Q Consensus        44 C~~C~~~f~~~~~l~~H~~   62 (99)
                      |..|+-.|..-..+..|..
T Consensus        11 C~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_          11 CSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             ETTTTEECSSHHHHHHHHH
T ss_pred             HhhCCceehhHHHHHHHHH
Confidence            5555556666555655554

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.05  E-value=0.33  Score=17.16  Aligned_cols=19  Identities=26%  Similarity=0.468  Sum_probs=12.6

Q ss_pred             ecccccccccCcchHHHHH
Q psy16685         43 QCQVCGKRFTASSNLYYHR   61 (99)
Q Consensus        43 ~C~~C~~~f~~~~~l~~H~   61 (99)
                      .|+.|...|.++..-..|.
T Consensus         2 vcpycslrf~sp~lk~ehe   20 (26)
T d1wjpa2           2 VCPYCSLRFFSPELKQEHE   20 (26)
T ss_dssp             CCTTTCCCBSSHHHHHHHH
T ss_pred             CCCcceeeeCCHHHhhHhh
Confidence            4777877777766555553