Psyllid ID: psy16704

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MLMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MLMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTgkaatenslmkynskeyffkAGLCHLCIDLLNCQQALSRYidlspafqdTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR
Flexible Loop (DISEMBL)
MLMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLeeedsdafsetvkefdsisrldQWYTTMLLkikrqistnedlr
Low Complexity Region (SEG)
MLMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR
Disordered region (IsUnstruct)
*LMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESL*********ETVKEFDSISRLDQWYTTMLLKIKR*********
Disordered Region (DISOPRED)
MLMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQ********
Disordered Region (DISEMBL)
MLMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE************EFDSISRLDQWYTTMLLKIKRQISTNEDLR
Disordered Region (DISPRO)
MLMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQIS******
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLMVIFMLMLIPMAMPFRLMLIFMLMMTFRIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	146	2.2.26 [Sep-21-2011]
Q23983	292	Soluble NSF attachment pr	yes	N/A	0.760	0.380	0.522	1e-30
P54921	295	Alpha-soluble NSF attachm	yes	N/A	0.760	0.376	0.535	2e-30
Q9DB05	295	Alpha-soluble NSF attachm	yes	N/A	0.760	0.376	0.535	3e-30
P54920	295	Alpha-soluble NSF attachm	yes	N/A	0.760	0.376	0.535	4e-30
P81125	295	Alpha-soluble NSF attachm	yes	N/A	0.760	0.376	0.535	1e-29
P81126	298	Beta-soluble NSF attachme	no	N/A	0.732	0.359	0.542	1e-28
P85969	297	Beta-soluble NSF attachme	no	N/A	0.732	0.360	0.532	2e-28
P28663	298	Beta-soluble NSF attachme	no	N/A	0.732	0.359	0.532	2e-28
Q9H115	298	Beta-soluble NSF attachme	no	N/A	0.732	0.359	0.532	2e-28
Q9SPE6	289	Alpha-soluble NSF attachm	yes	N/A	0.664	0.335	0.469	3e-20

>sp|Q23983|SNAP_DROME Soluble NSF attachment protein OS=Drosophila melanogaster GN=Snap PE=1 SV=1

 Score =  131 bits (329), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 84/111 (75%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     ++ E+SL+KY++KEYFF+A LCHL +DLLN Q A+ +Y    PAFQD+RE+K 
Sbjct: 182 IYEQVAASSLESSLLKYSAKEYFFRAALCHLSVDLLNAQHAIEKYAQQYPAFQDSREFKL 241

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           +  L E+LEE++ + F+E VK++DSISRLDQWYTT+LL+IK+    + DLR
Sbjct: 242 IKVLCENLEEQNIEGFTEAVKDYDSISRLDQWYTTILLRIKKAADEDPDLR 292

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Also between the endosome and phagosome.
Drosophila melanogaster (taxid: 7227)

>sp|P54921|SNAA_RAT Alpha-soluble NSF attachment protein OS=Rattus norvegicus GN=Napa PE=1 SV=2

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/112 (53%), Positives = 88/112 (78%), Gaps = 1/112 (0%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++   G +A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct: 184 IYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN-EDLR 146
           + KL+E+ EE++ D+++E+VKE+DSISRLDQW TTMLL+IK+ I  + EDLR
Sbjct: 244 MKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

Rattus norvegicus (taxid: 10116)

>sp|Q9DB05|SNAA_MOUSE Alpha-soluble NSF attachment protein OS=Mus musculus GN=Napa PE=1 SV=1

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/112 (53%), Positives = 87/112 (77%), Gaps = 1/112 (0%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++   G +A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct: 184 IYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN-EDLR 146
           + KL+E+ EE++ D+++E VKE+DSISRLDQW TTMLL+IK+ I  + EDLR
Sbjct: 244 MKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

Mus musculus (taxid: 10090)

>sp|P54920|SNAA_HUMAN Alpha-soluble NSF attachment protein OS=Homo sapiens GN=NAPA PE=1 SV=3

 Score =  129 bits (325), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/112 (53%), Positives = 87/112 (77%), Gaps = 1/112 (0%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++   G  A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct: 184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN-EDLR 146
           + KL+E+ EE++ D+++E+VKE+DSISRLDQW TTMLL+IK+ I  + EDLR
Sbjct: 244 MKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

Homo sapiens (taxid: 9606)

>sp|P81125|SNAA_BOVIN Alpha-soluble NSF attachment protein OS=Bos taurus GN=NAPA PE=1 SV=1

 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/112 (53%), Positives = 86/112 (76%), Gaps = 1/112 (0%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++   G  A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct: 184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKR 243

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN-EDLR 146
           + KL+E+ EE++ D+++E VKE+DSISRLDQW TTMLL+IK+ I  + EDLR
Sbjct: 244 IKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

Bos taurus (taxid: 9913)

>sp|P81126|SNAB_BOVIN Beta-soluble NSF attachment protein OS=Bos taurus GN=NAPB PE=1 SV=1

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/107 (54%), Positives = 80/107 (74%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           +F   G    +N L+KY++K+YFFKA LCH  +D LN + AL +Y ++ PAF D+RE K 
Sbjct: 184 IFEQIGANTMDNPLLKYSAKDYFFKAALCHFIVDELNAKLALEKYEEMFPAFTDSRECKL 243

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN 142
           L KL+E+ EE++S+A++E VKEFDSISRLDQW TTMLL+IK+ I  +
Sbjct: 244 LKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQGD 290

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

Bos taurus (taxid: 9913)

>sp|P85969|SNAB_RAT Beta-soluble NSF attachment protein OS=Rattus norvegicus GN=Napb PE=1 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 80/107 (74%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++   G    +N L+KY++K+YFFKA LCH  +D LN + AL +Y ++ PAF D+RE K 
Sbjct: 183 IYEQVGANTMDNPLLKYSAKDYFFKAALCHFIVDELNAKLALEKYEEMFPAFTDSRECKL 242

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN 142
           L KL+E+ EE++S+A++E VKEFDSISRLDQW TTMLL+IK+ I  +
Sbjct: 243 LKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQGD 289

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

Rattus norvegicus (taxid: 10116)

>sp|P28663|SNAB_MOUSE Beta-soluble NSF attachment protein OS=Mus musculus GN=Napb PE=1 SV=2

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 80/107 (74%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++   G    +N L+KY++K+YFFKA LCH  +D LN + AL +Y ++ PAF D+RE K 
Sbjct: 184 IYEQVGANTMDNPLLKYSAKDYFFKAALCHFIVDELNAKLALEKYEEMFPAFTDSRECKL 243

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN 142
           L KL+E+ EE++S+A++E VKEFDSISRLDQW TTMLL+IK+ I  +
Sbjct: 244 LKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQGD 290

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

Mus musculus (taxid: 10090)

>sp|Q9H115|SNAB_HUMAN Beta-soluble NSF attachment protein OS=Homo sapiens GN=NAPB PE=1 SV=2

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 80/107 (74%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++   G    +N L+KY++K+YFFKA LCH  +D LN + AL +Y ++ PAF D+RE K 
Sbjct: 184 IYEQVGANTMDNPLLKYSAKDYFFKAALCHFIVDELNAKLALEKYEEMFPAFTDSRECKL 243

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN 142
           L KL+E+ EE++S+A++E VKEFDSISRLDQW TTMLL+IK+ I  +
Sbjct: 244 LKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQGD 290

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

Homo sapiens (taxid: 9606)

>sp|Q9SPE6|SNAA2_ARATH Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana GN=ASNAP2 PE=1 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 1/98 (1%)

Query: 47  NSLMKYNSKEYFFKAGLCHLC-IDLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEE 105
           N+L+KY  K +   AG+CHLC  D+++   AL +Y DL P F  TRE KFL  L  +++E
Sbjct: 185 NNLLKYGVKGHLLTAGMCHLCKADVVSITNALEKYQDLDPTFTGTRECKFLADLASAIDE 244

Query: 106 EDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE 143
           ED   F++ VKEFDS++ LD W TTMLL++K ++   E
Sbjct: 245 EDIAKFTDVVKEFDSMTPLDSWKTTMLLRVKEKLKAKE 282

Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Binds to SNARE complex and then recruits NSF to disassemble it.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
242024716	292	Soluble NSF attachment protein, putative	0.760	0.380	0.603	1e-35
91082745	291	PREDICTED: similar to AGAP003192-PA [Tri	0.760	0.381	0.585	3e-35
307198831	246	Soluble NSF attachment protein [Harpegna	0.739	0.439	0.611	1e-34
383849884	292	PREDICTED: soluble NSF attachment protei	0.760	0.380	0.585	4e-34
380015858	292	PREDICTED: soluble NSF attachment protei	0.760	0.380	0.576	7e-34
66519254	292	PREDICTED: soluble NSF attachment protei	0.760	0.380	0.576	7e-34
357605232	292	putative Soluble NSF attachment protein	0.760	0.380	0.603	1e-33
340721388	292	PREDICTED: soluble NSF attachment protei	0.760	0.380	0.567	2e-33
156540437	241	PREDICTED: soluble NSF attachment protei	0.760	0.460	0.576	2e-33
307188146	292	Soluble NSF attachment protein [Camponot	0.760	0.380	0.576	4e-33

>gi|242024716|ref|XP_002432772.1| Soluble NSF attachment protein, putative [Pediculus humanus corporis] gi|212518281|gb|EEB20034.1| Soluble NSF attachment protein, putative [Pediculus humanus corporis]

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 89/111 (80%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     ++ ENSL+KY++KEYFF+A LCHLC+D+LN Q A+ RY  L PAFQD+REYK 
Sbjct: 182 IYEQVASSSLENSLLKYSAKEYFFRAALCHLCVDVLNAQHAMERYCQLYPAFQDSREYKL 241

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           L  LIE +EE++ DAF+E VK++DSISRLDQWYTT+LL+IK+Q+  N DLR
Sbjct: 242 LKVLIEHMEEQNVDAFTEAVKDYDSISRLDQWYTTILLRIKKQVDDNPDLR 292

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91082745|ref|XP_973149.1| PREDICTED: similar to AGAP003192-PA [Tribolium castaneum] gi|270014950|gb|EFA11398.1| hypothetical protein TcasGA2_TC013571 [Tribolium castaneum]

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 89/111 (80%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     +A E+SL+KY++KEY F+A LCHLC+D+LN Q A+ RY+ + PAFQD+REYK 
Sbjct: 181 IYQQVASSALESSLLKYSAKEYLFRAALCHLCVDVLNAQHAMERYVQMYPAFQDSREYKL 240

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           L  LIE +EE++ D F+E VKE+DSISRLDQWYTT+LL+IK+Q++ N DLR
Sbjct: 241 LTTLIEHMEEQNVDGFTEAVKEYDSISRLDQWYTTILLRIKKQLNENPDLR 291

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307198831|gb|EFN79607.1| Soluble NSF attachment protein [Harpegnathos saltator]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 88/108 (81%)

Query: 39  STGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKFLLK 98
           +   A+ E+SL+KY++KEYFF+A LCHLCID LN Q A+ RY +  PAFQD+REYK ++ 
Sbjct: 139 AVATASLESSLLKYSAKEYFFRAALCHLCIDALNAQHAIERYQEQYPAFQDSREYKLIMT 198

Query: 99  LIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           LIE LEE++ + F+E VKE+DSISRLDQWYTT+LL+IK+Q++ N DLR
Sbjct: 199 LIEHLEEQNLEGFTEAVKEYDSISRLDQWYTTVLLRIKKQVNDNPDLR 246

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849884|ref|XP_003700564.1| PREDICTED: soluble NSF attachment protein-like [Megachile rotundata]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 88/111 (79%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     A+ E+SL+KY++KEYFF+A LCHLC+D+LN Q A+ RY +  PAFQD+REYK 
Sbjct: 182 IYEQVASASLESSLLKYSAKEYFFRAALCHLCVDVLNAQHAIERYQEQYPAFQDSREYKL 241

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           +  LIE LEE+  + F+E VKE+DSISRLDQWYTT+LL+IK+Q++ N DLR
Sbjct: 242 IKTLIEHLEEQHLEGFTEAVKEYDSISRLDQWYTTVLLRIKKQVNDNPDLR 292

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380015858|ref|XP_003691911.1| PREDICTED: soluble NSF attachment protein-like [Apis florea]

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 87/111 (78%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     A+ E+SL+KY++KEYFF+A LCHLC+D+LN Q A+ RY +  PAFQD+REYK 
Sbjct: 182 IYEQVASASLESSLLKYSAKEYFFRAALCHLCVDVLNAQHAIERYQEQYPAFQDSREYKL 241

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           +  LIE +EE+  + F+E VKE+DSISRLDQWYTT+LL+IK+Q+  N DLR
Sbjct: 242 IKTLIEHIEEQQLEGFTEAVKEYDSISRLDQWYTTVLLRIKKQVDDNPDLR 292

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66519254|ref|XP_625208.1| PREDICTED: soluble NSF attachment protein [Apis mellifera]

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 87/111 (78%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     A+ E+SL+KY++KEYFF+A LCHLC+D+LN Q A+ RY +  PAFQD+REYK 
Sbjct: 182 IYEQVASASLESSLLKYSAKEYFFRAALCHLCVDVLNAQHAIERYQEQYPAFQDSREYKL 241

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           +  LIE +EE+  + F+E VKE+DSISRLDQWYTT+LL+IK+Q+  N DLR
Sbjct: 242 IKTLIEHIEEQQLEGFTEAVKEYDSISRLDQWYTTVLLRIKKQVDDNPDLR 292

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357605232|gb|EHJ64524.1| putative Soluble NSF attachment protein [Danaus plexippus]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 89/111 (80%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++    K++ +NSL+KY++KEY F+A LCHLC+DLLN Q AL +Y  L PAF DTRE K 
Sbjct: 182 IYEQIAKSSLDNSLLKYSAKEYMFRAALCHLCVDLLNAQHALDKYSALYPAFADTRECKL 241

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           + +LIE LEE++ DAF+E+VK +DSISRLDQWYTTML++IK+QI+ N DLR
Sbjct: 242 VKELIEHLEEQNIDAFTESVKTYDSISRLDQWYTTMLVRIKKQINDNPDLR 292

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721388|ref|XP_003399103.1| PREDICTED: soluble NSF attachment protein-like [Bombus terrestris] gi|350406637|ref|XP_003487834.1| PREDICTED: soluble NSF attachment protein-like [Bombus impatiens]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 87/111 (78%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     A+ E+SL+KY++KEYFF+A LCHLC+D LN Q A+ RY +  PAFQD+REYK 
Sbjct: 182 IYEQVASASLESSLLKYSAKEYFFRAALCHLCVDTLNAQHAIERYQEQYPAFQDSREYKL 241

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           +  LIE +E+E+ + F+E VKE+DSISRLDQWYTT+LL+IK+Q+  N +LR
Sbjct: 242 IKTLIEHIEDENLEGFTEAVKEYDSISRLDQWYTTVLLRIKKQVDVNPNLR 292

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156540437|ref|XP_001599153.1| PREDICTED: soluble NSF attachment protein-like [Nasonia vitripennis]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 87/111 (78%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     ++ E+SL+KY++KEYF +A LCHLC+D+LN Q A+ RY +  PAFQD REYK 
Sbjct: 131 IYEQVAASSLESSLLKYSAKEYFLRAALCHLCVDVLNAQHAIERYQEQCPAFQDAREYKL 190

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           +  LIE LEE++ + F+E VK++DSISRLDQWYTTMLL+IK+QI+ N DLR
Sbjct: 191 IKTLIEHLEEQNMEGFTEAVKDYDSISRLDQWYTTMLLRIKKQINDNPDLR 241

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188146|gb|EFN72978.1| Soluble NSF attachment protein [Camponotus floridanus]

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 87/111 (78%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
           ++     A+ E+SL+KY++KEYFF+A LCHLC+D LN Q A+ RY +  PAFQD+REYK 
Sbjct: 182 IYEQVASASLESSLLKYSAKEYFFRAALCHLCVDSLNAQHAIERYQEQYPAFQDSREYKL 241

Query: 96  LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
           +  LIE LE+++ + ++E VKE+DSISRLDQWYTT+LL+IK+QI  N DLR
Sbjct: 242 IKTLIEHLEDQNLEGYTEAVKEYDSISRLDQWYTTVLLRIKKQIHDNPDLR 292

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
UNIPROTKB|F1RLB6	295	NAPA "Uncharacterized protein"	0.760	0.376	0.544	3.8e-30
RGD|620855	295	Napa "N-ethylmaleimide-sensiti	0.760	0.376	0.535	1.3e-29
FB|FBgn0250791	292	Snap "Soluble NSF attachment p	0.760	0.380	0.522	1.6e-29
MGI|MGI:104563	295	Napa "N-ethylmaleimide sensiti	0.760	0.376	0.535	1.6e-29
UNIPROTKB|P54920	295	NAPA "Alpha-soluble NSF attach	0.760	0.376	0.535	2.7e-29
UNIPROTKB|A5D7S0	295	NAPA "Alpha-soluble NSF attach	0.760	0.376	0.535	3.4e-29
UNIPROTKB|P81125	295	NAPA "Alpha-soluble NSF attach	0.760	0.376	0.535	7.1e-29
ZFIN|ZDB-GENE-060531-160	295	si:dkeyp-117b8.3 "si:dkeyp-117	0.760	0.376	0.508	9.1e-29
ZFIN|ZDB-GENE-060503-566	295	si:rp71-81o21.2 "si:rp71-81o21	0.760	0.376	0.535	1.2e-28
UNIPROTKB|E1BQW1	296	NAPB "Uncharacterized protein"	0.746	0.368	0.541	3.1e-28

UNIPROTKB|F1RLB6 NAPA "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 61/112 (54%), Positives = 87/112 (77%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++   G  A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+REYK 
Sbjct:   184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSREYKL 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE-DLR 146
             + KL+E+ EE++ D+++E VKE+DSISRLDQW TTMLL+IK+ I  +E DLR
Sbjct:   244 MKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

GO:0070044 "synaptobrevin 2-SNAP-25-syntaxin-1a complex" evidence=IEA

GO:0045176 "apical protein localization" evidence=IEA

GO:0035494 "SNARE complex disassembly" evidence=IEA

GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IEA

GO:0019905 "syntaxin binding" evidence=IEA

GO:0010807 "regulation of synaptic vesicle priming" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

RGD|620855 Napa "N-ethylmaleimide-sensitive factor attachment protein, alpha" [Rattus norvegicus (taxid:10116)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 60/112 (53%), Positives = 88/112 (78%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++   G +A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct:   184 IYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE-DLR 146
             + KL+E+ EE++ D+++E+VKE+DSISRLDQW TTMLL+IK+ I  +E DLR
Sbjct:   244 MKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

GO:0000149 "SNARE binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006886 "intracellular protein transport" evidence=IEA;ISO

GO:0006944 "cellular membrane fusion" evidence=NAS

GO:0007420 "brain development" evidence=IEA;ISO

GO:0010807 "regulation of synaptic vesicle priming" evidence=IEA;ISO

GO:0019905 "syntaxin binding" evidence=IEA;ISO

GO:0030182 "neuron differentiation" evidence=IEA;ISO

GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA;ISO

GO:0035494 "SNARE complex disassembly" evidence=IEA;ISO

GO:0045176 "apical protein localization" evidence=IEA;ISO

GO:0070044 "synaptobrevin 2-SNAP-25-syntaxin-1a complex" evidence=ISO;IDA

FB|FBgn0250791 Snap "Soluble NSF attachment protein" [Drosophila melanogaster (taxid:7227)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 58/111 (52%), Positives = 84/111 (75%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++     ++ E+SL+KY++KEYFF+A LCHL +DLLN Q A+ +Y    PAFQD+RE+K 
Sbjct:   182 IYEQVAASSLESSLLKYSAKEYFFRAALCHLSVDLLNAQHAIEKYAQQYPAFQDSREFKL 241

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNEDLR 146
             +  L E+LEE++ + F+E VK++DSISRLDQWYTT+LL+IK+    + DLR
Sbjct:   242 IKVLCENLEEQNIEGFTEAVKDYDSISRLDQWYTTILLRIKKAADEDPDLR 292

GO:0005483 "soluble NSF attachment protein activity" evidence=NAS

GO:0007269 "neurotransmitter secretion" evidence=NAS

GO:0016082 "synaptic vesicle priming" evidence=NAS

GO:0019898 "extrinsic to membrane" evidence=NAS

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=NAS

GO:0043679 "axon terminus" evidence=IDA

GO:0007268 "synaptic transmission" evidence=IMP

GO:0048526 "imaginal disc-derived wing expansion" evidence=IMP

GO:0001745 "compound eye morphogenesis" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0006886 "intracellular protein transport" evidence=IMP

GO:0031410 "cytoplasmic vesicle" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0031201 "SNARE complex" evidence=IDA

MGI|MGI:104563 Napa "N-ethylmaleimide sensitive fusion protein attachment protein alpha" [Mus musculus (taxid:10090)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 60/112 (53%), Positives = 87/112 (77%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++   G +A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct:   184 IYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE-DLR 146
             + KL+E+ EE++ D+++E VKE+DSISRLDQW TTMLL+IK+ I  +E DLR
Sbjct:   244 MKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

GO:0000149 "SNARE binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0006810 "transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IMP

GO:0007420 "brain development" evidence=IMP

GO:0010807 "regulation of synaptic vesicle priming" evidence=IGI

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0019905 "syntaxin binding" evidence=IDA

GO:0030182 "neuron differentiation" evidence=IMP

GO:0035249 "synaptic transmission, glutamatergic" evidence=IGI

GO:0035494 "SNARE complex disassembly" evidence=IGI

GO:0045176 "apical protein localization" evidence=IMP

GO:0070044 "synaptobrevin 2-SNAP-25-syntaxin-1a complex" evidence=ISO;IDA

UNIPROTKB|P54920 NAPA "Alpha-soluble NSF attachment protein" [Homo sapiens (taxid:9606)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 60/112 (53%), Positives = 87/112 (77%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++   G  A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct:   184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE-DLR 146
             + KL+E+ EE++ D+++E+VKE+DSISRLDQW TTMLL+IK+ I  +E DLR
Sbjct:   244 MKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0010807 "regulation of synaptic vesicle priming" evidence=IEA

GO:0019905 "syntaxin binding" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IEA

GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA

GO:0035494 "SNARE complex disassembly" evidence=IEA

GO:0045176 "apical protein localization" evidence=IEA

GO:0070044 "synaptobrevin 2-SNAP-25-syntaxin-1a complex" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=TAS

GO:0006944 "cellular membrane fusion" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS

GO:0016044 "cellular membrane organization" evidence=TAS

UNIPROTKB|A5D7S0 NAPA "Alpha-soluble NSF attachment protein" [Bos taurus (taxid:9913)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 60/112 (53%), Positives = 86/112 (76%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++   G  A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct:   184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE-DLR 146
             + KL+E+ EE++ D+++E VKE+DSISRLDQW TTMLL+IK+ I  +E DLR
Sbjct:   244 MKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

GO:0070044 "synaptobrevin 2-SNAP-25-syntaxin-1a complex" evidence=IEA

GO:0045176 "apical protein localization" evidence=IEA

GO:0035494 "SNARE complex disassembly" evidence=IEA

GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IEA

GO:0019905 "syntaxin binding" evidence=IEA

GO:0010807 "regulation of synaptic vesicle priming" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

UNIPROTKB|P81125 NAPA "Alpha-soluble NSF attachment protein" [Bos taurus (taxid:9913)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 60/112 (53%), Positives = 86/112 (76%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++   G  A ++ L+KY++K+YFFKA LCH CID+LN + A+ +Y +L PAF D+RE K 
Sbjct:   184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKR 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE-DLR 146
             + KL+E+ EE++ D+++E VKE+DSISRLDQW TTMLL+IK+ I  +E DLR
Sbjct:   244 IKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

ZFIN|ZDB-GENE-060531-160 si:dkeyp-117b8.3 "si:dkeyp-117b8.3" [Danio rerio (taxid:7955)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 57/112 (50%), Positives = 84/112 (75%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             +F   G  + + +L+KY +K++FFKA LCH C+D+LNC+ A+ +Y D+ PAF D RE K 
Sbjct:   184 IFEQIGTYSMDTTLLKYGAKDHFFKAALCHFCVDMLNCRLAVQKYEDMFPAFSDARECKL 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE-DLR 146
             L KL+++ +E++ DA+++ V+EFDSI+RLDQW TTMLL+IK+ I   E DLR
Sbjct:   244 LKKLLDAHDEQNIDAYADAVREFDSITRLDQWQTTMLLRIKKTIQDEESDLR 295

GO:0006886 "intracellular protein transport" evidence=IEA

ZFIN|ZDB-GENE-060503-566 si:rp71-81o21.2 "si:rp71-81o21.2" [Danio rerio (taxid:7955)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 60/112 (53%), Positives = 84/112 (75%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++   G    +N L+KY++KEYFFKA LCH  +D LN + A+ +Y ++ PAF D+RE K 
Sbjct:   184 IYEQVGSNTMDNPLLKYSAKEYFFKASLCHFIVDELNAKLAIGKYEEMFPAFSDSRECKL 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNE-DLR 146
             L KL+E+ EE++++AF+E VKEFDSISRLDQW TTMLL+IK+ I  +E DL+
Sbjct:   244 LKKLLEAHEEQNAEAFTEAVKEFDSISRLDQWLTTMLLRIKKTIQGDEGDLK 295

GO:0006886 "intracellular protein transport" evidence=IEA

UNIPROTKB|E1BQW1 NAPB "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 59/109 (54%), Positives = 80/109 (73%)

Query:    36 LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQQALSRYIDLSPAFQDTREYKF 95
             ++   G    +N L+KY++KEYFFKA LCH  +D LN + AL +Y ++ PAF D+RE K 
Sbjct:   184 IYEQVGTNTMDNPLLKYSAKEYFFKAALCHFIVDELNAKLALEKYEEMFPAFTDSRECKL 243

Query:    96 LLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNED 144
             L KL+E+ EE++S+A++E VKEFDSISRLDQW TTMLL+IK+ I    D
Sbjct:   244 LKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQGEGD 292

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0010807 "regulation of synaptic vesicle priming" evidence=IEA

GO:0019905 "syntaxin binding" evidence=IEA

GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA

GO:0035494 "SNARE complex disassembly" evidence=IEA

GO:0070044 "synaptobrevin 2-SNAP-25-syntaxin-1a complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P54920	SNAA_HUMAN	No assigned EC number	0.5357	0.7602	0.3762	yes	N/A
P54921	SNAA_RAT	No assigned EC number	0.5357	0.7602	0.3762	yes	N/A
Q23983	SNAP_DROME	No assigned EC number	0.5225	0.7602	0.3801	yes	N/A
Q9DB05	SNAA_MOUSE	No assigned EC number	0.5357	0.7602	0.3762	yes	N/A
P81125	SNAA_BOVIN	No assigned EC number	0.5357	0.7602	0.3762	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
KOG1586|consensus	288		100.0
PF14938	282	SNAP: Soluble NSF attachment protein, SNAP; PDB: 1	100.0
KOG1585|consensus	308		95.52
PF04190	260	DUF410: Protein of unknown function (DUF410) ; Int	95.26
PRK15363	157	pathogenicity island 2 chaperone protein SscA; Pro	91.19
KOG3024|consensus	312		85.73
PRK10866	243	outer membrane biogenesis protein BamD; Provisiona	84.98
PF14559	68	TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN	82.89
PF13525	203	YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M	82.74
PRK15331	165	chaperone protein SicA; Provisional	81.86
TIGR02795	119	tol_pal_ybgF tol-pal system protein YbgF. Members	80.21

>KOG1586|consensus

Probab=100.00  E-value=1.2e-48  Score=327.69  Aligned_cols=117  Identities=52%  Similarity=0.910  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCH
Q psy16704         30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDS  108 (146)
Q Consensus        30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~  108 (146)
                      -+.|+++||+||+.+++|||||||||||||||||||||. |++++++|+|+|+++||+|.+|||||||++|++|+|++|.
T Consensus       170 Y~~Ai~iyeqva~~s~~n~LLKys~KdyflkAgLChl~~~D~v~a~~ALeky~~~dP~F~dsREckflk~L~~aieE~d~  249 (288)
T KOG1586|consen  170 YSKAIDIYEQVARSSLDNNLLKYSAKDYFLKAGLCHLCKADEVNAQRALEKYQELDPAFTDSRECKFLKDLLDAIEEQDI  249 (288)
T ss_pred             HHHHHHHHHHHHHHhccchHHHhHHHHHHHHHHHHhHhcccHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHhhhhH
Confidence            368999999999999999999999999999999999996 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhccCCchHHHHHHHHHHHhhcCCC-CCCC
Q psy16704        109 DAFSETVKEFDSISRLDQWYTTMLLKIKRQISTN-EDLR  146 (146)
Q Consensus       109 e~Ft~aV~eYD~isrLD~WKT~mLLkIKk~I~~~-~dl~  146 (146)
                      ++||++|++||+|||||+|+||||+|||++|+++ |||+
T Consensus       250 e~fte~vkefDsisrLD~W~ttiLlkiK~siq~~edDL~  288 (288)
T KOG1586|consen  250 EKFTEVVKEFDSISRLDQWKTTILLKIKKSIQGDEDDLR  288 (288)
T ss_pred             HHHHHHHHhhhccchHHHHHHHHHHHHHHHHhccccccC
Confidence            9999999999999999999999999999999885 6675

>PF14938 SNAP: Soluble NSF attachment protein, SNAP; PDB: 1QQE_A 2IFU_A

Probab=100.00  E-value=1.9e-38  Score=260.25  Aligned_cols=111  Identities=50%  Similarity=0.819  Sum_probs=103.8

Q ss_pred             HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCH
Q psy16704         30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDS  108 (146)
Q Consensus        30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~  108 (146)
                      -.+|+++||++++.+++++|+|||+|+|||+|+|||||. |+|+|++++++|.+.||+|.+||||+|+.+|++|+++||+
T Consensus       171 y~~A~~~~e~~~~~~l~~~l~~~~~~~~~l~a~l~~L~~~D~v~A~~~~~~~~~~~~~F~~s~E~~~~~~l~~A~~~~D~  250 (282)
T PF14938_consen  171 YEEAIEIYEEVAKKCLENNLLKYSAKEYFLKAILCHLAMGDYVAARKALERYCSQDPSFASSREYKFLEDLLEAYEEGDV  250 (282)
T ss_dssp             HHHHHHHHHHHHHTCCCHCTTGHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHGTTSTTSTTSHHHHHHHHHHHHHHTT-C
T ss_pred             HHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHhCCH
Confidence            368999999999999999999999999999999999999 9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhccCCchHHHHHHHHHHHhhcC
Q psy16704        109 DAFSETVKEFDSISRLDQWYTTMLLKIKRQIS  140 (146)
Q Consensus       109 e~Ft~aV~eYD~isrLD~WKT~mLLkIKk~I~  140 (146)
                      |+|+++|++||+|+|||+|||+||++||++|+
T Consensus       251 e~f~~av~~~d~~~~ld~w~~~~l~~~k~~~~  282 (282)
T PF14938_consen  251 EAFTEAVAEYDSISRLDNWKTKMLLKIKKKIE  282 (282)
T ss_dssp             CCHHHHCHHHTTSS---HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCccHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999984

>KOG1585|consensus

Probab=95.52  E-value=0.031  Score=48.60  Aligned_cols=58  Identities=19%  Similarity=0.338  Sum_probs=50.5

Q ss_pred             hHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHHHHHHHHH
Q psy16704         58 FFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSDAFSETVK  116 (146)
Q Consensus        58 ffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e~Ft~aV~  116 (146)
                      ++-+.|-||-. |.+.|++....-.+ -|.|.+|-++.-++.|+.+.++||.|.+++.+.
T Consensus       193 ~va~ilv~L~~~Dyv~aekc~r~~~q-ip~f~~sed~r~lenLL~ayd~gD~E~~~kvl~  251 (308)
T KOG1585|consen  193 YVAAILVYLYAHDYVQAEKCYRDCSQ-IPAFLKSEDSRSLENLLTAYDEGDIEEIKKVLS  251 (308)
T ss_pred             HHHHHHHHhhHHHHHHHHHHhcchhc-CccccChHHHHHHHHHHHHhccCCHHHHHHHHc
Confidence            66778888877 99999998876444 589999999999999999999999999988664

>PF04190 DUF410: Protein of unknown function (DUF410) ; InterPro: IPR007317 This is a family of conserved eukaryotic proteins with undetermined function

Probab=95.26  E-value=0.13  Score=42.79  Aligned_cols=85  Identities=18%  Similarity=0.285  Sum_probs=65.5

Q ss_pred             hHHhHHhHHHHHhc-chhHHHHHHhHHHhc----CCC--------CccchHHHHHHHHHHHHhhcCHHHHHHHHHhhhcc
Q psy16704         55 KEYFFKAGLCHLCI-DLLNCQQALSRYIDL----SPA--------FQDTREYKFLLKLIESLEEEDSDAFSETVKEFDSI  121 (146)
Q Consensus        55 KeyffkA~LC~L~~-D~v~a~~ale~Y~~~----DPs--------F~~SRE~klL~~LieAve~~D~e~Ft~aV~eYD~i  121 (146)
                      --|..||.|.+||. +...|+.+++.|.+.    .|.        |.++.--.|++=|+.+|+.++.+.|..-...|-..
T Consensus       141 dlfi~RaVL~yL~l~n~~~A~~~~~~f~~~~~~~~p~~~~~~~~~~~~~PllnF~~lLl~t~e~~~~~~F~~L~~~Y~~~  220 (260)
T PF04190_consen  141 DLFIARAVLQYLCLGNLRDANELFDTFTSKLIESHPKLENSDIEYPPSYPLLNFLQLLLLTCERDNLPLFKKLCEKYKPS  220 (260)
T ss_dssp             HHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHH---EEEEEEEEESS-HHHHHHHHHHHHHHHT-HHHHHHHHHHTHH-
T ss_pred             hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhccCcchhccccCCCCCCchHHHHHHHHHHHhcCcHHHHHHHHHHhCcc
Confidence            45788999999999 999999999999988    564        44567789999999999999999999999999884


Q ss_pred             CCchHHHHHHHHHHHhhc
Q psy16704        122 SRLDQWYTTMLLKIKRQI  139 (146)
Q Consensus       122 srLD~WKT~mLLkIKk~I  139 (146)
                      =+=|+=-...|.+|-+..
T Consensus       221 L~rd~~~~~~L~~IG~~y  238 (260)
T PF04190_consen  221 LKRDPSFKEYLDKIGQLY  238 (260)
T ss_dssp             --HHHHTHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHH
Confidence            333644445788887654

; PDB: 3LKU_E 2WPV_G.

>PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional

Probab=91.19  E-value=0.75  Score=36.63  Aligned_cols=47  Identities=11%  Similarity=0.118  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcC
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLS   84 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~D   84 (146)
                      .+|++.|++-+.-..++|       .-.+.+|.|+|.. |...|+++++.=.++.
T Consensus        86 ~~AI~aY~~A~~L~~ddp-------~~~~~ag~c~L~lG~~~~A~~aF~~Ai~~~  133 (157)
T PRK15363         86 GEAIYAYGRAAQIKIDAP-------QAPWAAAECYLACDNVCYAIKALKAVVRIC  133 (157)
T ss_pred             HHHHHHHHHHHhcCCCCc-------hHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence            589999999999988888       5678999999999 9999999999666655

>KOG3024|consensus

Probab=85.73  E-value=6.5  Score=34.72  Aligned_cols=86  Identities=20%  Similarity=0.297  Sum_probs=73.2

Q ss_pred             hhHHhHHhHHHHHhc-chhHHHHHHhHHHh------------c------CCCCccchHHHHHHHHHHHHhhcCHHHHHHH
Q psy16704         54 SKEYFFKAGLCHLCI-DLLNCQQALSRYID------------L------SPAFQDTREYKFLLKLIESLEEEDSDAFSET  114 (146)
Q Consensus        54 aKeyffkA~LC~L~~-D~v~a~~ale~Y~~------------~------DPsF~~SRE~klL~~LieAve~~D~e~Ft~a  114 (146)
                      .-.++.+|.|-+||. |...|-++++.|.+            .      +|-|..+.--.||.=|++.++.+|...|..-
T Consensus       176 ~d~f~~~aVlq~L~len~~~A~~s~t~yt~~f~~k~~p~~e~~~~~~~k~~~~~~~pllNFl~~Ll~t~~~k~~~~f~~L  255 (312)
T KOG3024|consen  176 PDVFYVQAVLQYLCLENDSSAARSFTTYTSMFNMKDFPMDEIKHKAGTKNPFPFEYPLLNFLHFLLETIQRKDLPLFLML  255 (312)
T ss_pred             chHHHHHHHHHHHhhcchHHHHHHHHHHHHhhccccccchhhcccccccCCCccccchHHHHHHHHHHHhccccHHHHHH
Confidence            347899999999999 99999999999988            3      4577888889999999999999999999999


Q ss_pred             HHhhhccCCchHHHHHHHHHHHhhc
Q psy16704        115 VKEFDSISRLDQWYTTMLLKIKRQI  139 (146)
Q Consensus       115 V~eYD~isrLD~WKT~mLLkIKk~I  139 (146)
                      +..|+.=-|=|.--..-|.||-+..
T Consensus       256 ~~~Y~~slkrd~~~~~~L~~Igely  280 (312)
T KOG3024|consen  256 RVKYQPSLKRDQAYNEYLDRIGELY  280 (312)
T ss_pred             HHHccchhhhhHHHHHHHHHHHHHH
Confidence            9999985566766667777776543

>PRK10866 outer membrane biogenesis protein BamD; Provisional

Probab=84.98  E-value=7.2  Score=32.01  Aligned_cols=65  Identities=14%  Similarity=0.068  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHH
Q psy16704         32 VYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLI  100 (146)
Q Consensus        32 ~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~Li  100 (146)
                      .|++.||++....-+++..   .+. .+.-+-+|+-. |...|...++++.+.+|+-+..-+..++.+++
T Consensus        50 ~Ai~~f~~l~~~yP~s~~a---~~a-~l~la~ayy~~~~y~~A~~~~e~fi~~~P~~~~~~~a~Y~~g~~  115 (243)
T PRK10866         50 QAITQLEALDNRYPFGPYS---QQV-QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVLYMRGLT  115 (243)
T ss_pred             HHHHHHHHHHHhCCCChHH---HHH-HHHHHHHHHhcCCHHHHHHHHHHHHHhCcCCCchHHHHHHHHHh
Confidence            6888899988876666533   333 45677888888 99999999999999999999999999999987

>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A

Probab=82.89  E-value=6.4  Score=24.62  Aligned_cols=49  Identities=16%  Similarity=0.125  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCC
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPA   86 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPs   86 (146)
                      .+|.+.|+++....=+|+       +..+.-+-|++.. +...|+..+++....+|+
T Consensus         8 ~~A~~~~~~~l~~~p~~~-------~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~   57 (68)
T PF14559_consen    8 DEAIELLEKALQRNPDNP-------EARLLLAQCYLKQGQYDEAEELLERLLKQDPD   57 (68)
T ss_dssp             HHHHHHHHHHHHHTTTSH-------HHHHHHHHHHHHTT-HHHHHHHHHCCHGGGTT
T ss_pred             HHHHHHHHHHHHHCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC
Confidence            479999999988766655       5555677888888 999999999999999998

...

>PF13525 YfiO: Outer membrane lipoprotein; PDB: 3TGO_A 3Q5M_A 2YHC_A

Probab=82.74  E-value=20  Score=28.12  Aligned_cols=104  Identities=14%  Similarity=0.144  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHh-----
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE-----  104 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve-----  104 (146)
                      .+|++.|+++....=++++   +.+- .|..+-++... |...|...+++|....|+-+..-+..++.++..--.     
T Consensus        22 ~~Ai~~f~~l~~~~P~s~~---a~~A-~l~la~a~y~~~~y~~A~~~~~~fi~~yP~~~~~~~A~Y~~g~~~~~~~~~~~   97 (203)
T PF13525_consen   22 EEAIKLFEKLIDRYPNSPY---APQA-QLMLAYAYYKQGDYEEAIAAYERFIKLYPNSPKADYALYMLGLSYYKQIPGIL   97 (203)
T ss_dssp             HHHHHHHHHHHHH-TTSTT---HHHH-HHHHHHHHHHTT-HHHHHHHHHHHHHH-TT-TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCChH---HHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhhHHHHHHHHHHHhCccch
Confidence            4799999999998777664   3333 46667778877 999999999999999999998889988888754222     


Q ss_pred             --hcCHH-------HHHHHHHhhhccCCchHHHHHHHHHHHhhc
Q psy16704        105 --EEDSD-------AFSETVKEFDSISRLDQWYTTMLLKIKRQI  139 (146)
Q Consensus       105 --~~D~e-------~Ft~aV~eYD~isrLD~WKT~mLLkIKk~I  139 (146)
                        +.|..       .|.+-+..|-.=.. =+.=...+..+++.+
T Consensus        98 ~~~~D~~~~~~A~~~~~~li~~yP~S~y-~~~A~~~l~~l~~~l  140 (203)
T PF13525_consen   98 RSDRDQTSTRKAIEEFEELIKRYPNSEY-AEEAKKRLAELRNRL  140 (203)
T ss_dssp             -TT---HHHHHHHHHHHHHHHH-TTSTT-HHHHHHHHHHHHHHH
T ss_pred             hcccChHHHHHHHHHHHHHHHHCcCchH-HHHHHHHHHHHHHHH
Confidence              33443       45555555555333 333334444555554

>PRK15331 chaperone protein SicA; Provisional

Probab=81.86  E-value=4.5  Score=32.53  Aligned_cols=50  Identities=12%  Similarity=0.089  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ   88 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~   88 (146)
                      ..|++.|.--+.-..++|--       .|.||.|+|+. |...|+.+++.=.+ -|+..
T Consensus        88 ~~Ai~~Y~~A~~l~~~dp~p-------~f~agqC~l~l~~~~~A~~~f~~a~~-~~~~~  138 (165)
T PRK15331         88 QKACDLYAVAFTLLKNDYRP-------VFFTGQCQLLMRKAAKARQCFELVNE-RTEDE  138 (165)
T ss_pred             HHHHHHHHHHHHcccCCCCc-------cchHHHHHHHhCCHHHHHHHHHHHHh-CcchH
Confidence            47888888888888888743       89999999999 99999999987766 34433

>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF

Probab=80.21  E-value=13  Score=24.86  Aligned_cols=64  Identities=11%  Similarity=0.056  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLK   98 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~   98 (146)
                      .+|.+.|+++....=+++   +.. +-.+..|.|.+.. +...|...+++....+|......+..+...
T Consensus        19 ~~A~~~~~~~~~~~~~~~---~~~-~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~   83 (119)
T TIGR02795        19 ADAIQAFQAFLKKYPKST---YAP-NAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLKLG   83 (119)
T ss_pred             HHHHHHHHHHHHHCCCcc---ccH-HHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHHHH
Confidence            468999999987654443   222 3345566667766 999999999999999998876666544433

Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	146
1qqe_A	292	Crystal Structure Of The Vesicular Transport Protei		6e-14

>pdb|1QQE|A Chain A, Crystal Structure Of The Vesicular Transport Protein Sec17 Length = 292

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 32  VYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCIDLLNCQ-QALSRYIDLSPAFQDT 90
           +YS L     K++  N L +++ K+YF K GLC L         + L       P F D+
Sbjct: 180 IYSKLI----KSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235
Query: 91  REYKFLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNED 144
           RE  FL  LI+++ E DS+  SE  KEFD+  RLD+W  T+L KIK  I   ED
Sbjct: 236 RESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQED 289

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	146
1qqe_A	292	Vesicular transport protein SEC17; helix-turn-heli	7e-37
2ifu_A	307	Gamma-SNAP; membrane fusion, snare complex disasse	2e-23

>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 Length = 292

 Score =  127 bits (319), Expect = 7e-37
 Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 36  LFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYK 94
           ++    K++  N L +++ K+YF K GLC L   D +   + L       P F D+RE  
Sbjct: 180 IYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESN 239

Query: 95  FLLKLIESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNED 144
           FL  LI+++ E DS+  SE  KEFD+  RLD+W  T+L KIK  I   ED
Sbjct: 240 FLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQED 289

>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} Length = 307

 Score = 91.5 bits (227), Expect = 2e-23
 Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 3/96 (3%)

Query: 46  ENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE 104
           +         +      L  L   D +  Q+ +     + P F  + +   L  L+++ +
Sbjct: 186 KEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYSI-PGFSGSEDCAALEDLLQAYD 244

Query: 105 EEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQIS 140
           E+D +      +    ++ +D  Y  + + +K    
Sbjct: 245 EQDEEQLLRVCRS-PLVTYMDNDYAKLAISLKVPGG 279

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	146
1qqe_A	292	Vesicular transport protein SEC17; helix-turn-heli	99.78
2ifu_A	307	Gamma-SNAP; membrane fusion, snare complex disasse	99.5
3lpz_A	336	GET4 (YOR164C homolog); protein targeting, tail-an	95.7
2wpv_A	312	GET4, UPF0363 protein YOR164C; golgi-ER traffickin	94.76
2kc7_A	99	BFR218_protein; tetratricopeptide repeat, all-alph	93.68
2yhc_A	225	BAMD, UPF0169 lipoprotein YFIO; essential BAM comp	91.64
3upv_A	126	Heat shock protein STI1; TPR-fold, adaptor protein	88.11
2l6j_A	111	TPR repeat-containing protein associated with HSP;	87.44
3qky_A	261	Outer membrane assembly lipoprotein YFIO; membrane	86.68
3qky_A	261	Outer membrane assembly lipoprotein YFIO; membrane	84.62
2kat_A	115	Uncharacterized protein; NESG, structure, structur	83.7
1hxi_A	121	PEX5, peroxisome targeting signal 1 receptor PEX5;	83.63
4gco_A	126	Protein STI-1; structural genomics, PSI-biology, m	81.96
3upv_A	126	Heat shock protein STI1; TPR-fold, adaptor protein	81.33
3sz7_A	164	HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G	81.11
2xev_A	129	YBGF; tetratricopeptide, alpha-helical, metal bind	80.21

>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1

Probab=99.78  E-value=7e-19  Score=138.17  Aligned_cols=116  Identities=39%  Similarity=0.624  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|++.|+++.....+++..+|++++++++.|+|++.. |...|...++++.+++|+|.+++|++++.++.++++.+|.+
T Consensus       175 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~  254 (292)
T 1qqe_A          175 IEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSE  254 (292)
T ss_dssp             HHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHH
Confidence            58999999999999999999999999999999999998 99999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhccCCchHHHHHHHHHHHhhcCCC-CCCC
Q psy16704        110 AFSETVKEFDSISRLDQWYTTMLLKIKRQISTN-EDLR  146 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD~WKT~mLLkIKk~I~~~-~dl~  146 (146)
                      .|.+++..|+++.++|+|+++++++||+.++++ +||+
T Consensus       255 ~~~~A~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~  292 (292)
T 1qqe_A          255 QLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDLL  292 (292)
T ss_dssp             THHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHHHhccCCccHHHHHHHHHHHHHHhhccccccC
Confidence            999999999999999999999999999999764 6775

>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}

Probab=99.50  E-value=7.7e-14  Score=110.12  Aligned_cols=103  Identities=15%  Similarity=0.164  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|++.|++....+-+++. +++...+++..|+|+++. |...|...++++. ++|+|.++||++++..++++++++|.+
T Consensus       172 ~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~~e~~~l~~l~~~~~~~d~~  249 (307)
T 2ifu_A          172 DEAAASLQKEKSMYKEMEN-YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGSEDCAALEDLLQAYDEQDEE  249 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTSHHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHHHHHHHcCC-hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHHHHhcCHH
Confidence            5899999999998888875 788889999999999998 9999999999999 999999999999999999999999999


Q ss_pred             HHHHHHHhhhccCCchHHHHHHHHHHH
Q psy16704        110 AFSETVKEFDSISRLDQWYTTMLLKIK  136 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD~WKT~mLLkIK  136 (146)
                      .|.+ +.+||++++||+|+++++.+++
T Consensus       250 ~~~~-~~~~~~~~~ld~~~~~~~~~l~  275 (307)
T 2ifu_A          250 QLLR-VCRSPLVTYMDNDYAKLAISLK  275 (307)
T ss_dssp             HHHH-HTTSHHHHTSCHHHHHHHHTCC
T ss_pred             HHHH-HHhCchhhhhhHHHHHHHHhCC
Confidence            9999 8889999999999999998765

>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}

Probab=95.70  E-value=0.023  Score=48.54  Aligned_cols=84  Identities=18%  Similarity=0.239  Sum_probs=68.9

Q ss_pred             hhHHhHHhHHHHHhc-chhHHHHHHhHHHhc----CCC---------------CccchHHHHHHHHHHHHhhcCHHHHHH
Q psy16704         54 SKEYFFKAGLCHLCI-DLLNCQQALSRYIDL----SPA---------------FQDTREYKFLLKLIESLEEEDSDAFSE  113 (146)
Q Consensus        54 aKeyffkA~LC~L~~-D~v~a~~ale~Y~~~----DPs---------------F~~SRE~klL~~LieAve~~D~e~Ft~  113 (146)
                      +--|..+|.|++||. +...|+.+++.|.+.    .|.               |.++.=-.|+.=|+.+|+.++.+.|..
T Consensus       186 ~dlfiaRaVL~yL~l~n~~~A~~~~~~f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLLNFl~lLllt~q~~~~~lF~~  265 (336)
T 3lpz_A          186 APLYCARAVLPYLLVANVRAANTAYRIFTSALVEDNKGLTVQNIGSQSAELRIFPSLPLLNFISMLLLSVQKGSPDLFRQ  265 (336)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCTTSCCEESCC--CCCEECTTCHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhcCCCccccccccCCcccccCCCCchHHHHHHHHHHHhcCCHHHHHH
Confidence            445789999999999 999999999888753    354               566777889999999999999999999


Q ss_pred             HHHhhhccCCchH--HHHHHHHHHHhh
Q psy16704        114 TVKEFDSISRLDQ--WYTTMLLKIKRQ  138 (146)
Q Consensus       114 aV~eYD~isrLD~--WKT~mLLkIKk~  138 (146)
                      -+..|...-+-|+  |.. -|.+|-+.
T Consensus       266 L~~~Y~~~l~rd~~~~~~-~L~~IG~~  291 (336)
T 3lpz_A          266 LKSKYEANLNELNGIWDT-ALELIAEM  291 (336)
T ss_dssp             HHHHTHHHHHTTTTTTHH-HHHHHHHH
T ss_pred             HHHHHHHHHHhcHHHHHH-HHHHHHHH
Confidence            9999998766664  754 56666553

>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A

Probab=94.76  E-value=0.046  Score=45.95  Aligned_cols=80  Identities=16%  Similarity=0.292  Sum_probs=66.5

Q ss_pred             HHhHHhHHHHHhc-chhHHHHHHhHHHhc-----------------C-CCCccchHHHHHHHHHHHHhhcCHHHHHHHHH
Q psy16704         56 EYFFKAGLCHLCI-DLLNCQQALSRYIDL-----------------S-PAFQDTREYKFLLKLIESLEEEDSDAFSETVK  116 (146)
Q Consensus        56 eyffkA~LC~L~~-D~v~a~~ale~Y~~~-----------------D-PsF~~SRE~klL~~LieAve~~D~e~Ft~aV~  116 (146)
                      -|..+|.|++||. +...|+.+++.|.+.                 | |-|+++.--.|+.=|+.+|+.++.+.|...+.
T Consensus       189 lf~~RaVL~yL~l~n~~~A~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~pllnF~~lLl~t~e~~~~~lF~~L~~  268 (312)
T 2wpv_A          189 EFFSRLVFNYLFISNISFAHESKDIFLERFIEKFHPKYEKIDKNGYEIVFFEDYSDLNFLQLLLITCQTKDKSYFLNLKN  268 (312)
T ss_dssp             HHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHCCCEEEEEETTEEEEEESSCHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhcccccccccccccCCCCCCCCccHHHHHHHHHHHhcCCHHHHHHHHH
Confidence            3679999999999 999999999999643                 2 22577899999999999999999999999999


Q ss_pred             hhhccCCchHHHHHHHHHHHhh
Q psy16704        117 EFDSISRLDQWYTTMLLKIKRQ  138 (146)
Q Consensus       117 eYD~isrLD~WKT~mLLkIKk~  138 (146)
                      .|...-+  .| ...|.+|-+.
T Consensus       269 ~Y~~~L~--~~-~~~L~~Ig~~  287 (312)
T 2wpv_A          269 HYLDFSQ--AY-KSELEFLGQE  287 (312)
T ss_dssp             HCHHHHH--HT-HHHHHHHHHH
T ss_pred             HHHHHHH--HH-HHHHHHHHHH
Confidence            9998854  55 4556666654

>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}

Probab=93.68  E-value=0.33  Score=30.40  Aligned_cols=74  Identities=8%  Similarity=0.014  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|.+.|++..+..-++      ....++.-|.|+... +...|...+++..+.+|......-.               .
T Consensus        17 ~~A~~~~~~al~~~p~~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~---------------~   75 (99)
T 2kc7_A           17 ENALQALEEFLQTEPVG------KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR---------------K   75 (99)
T ss_dssp             HHHHHHHHHHHHHCSST------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH---------------H
T ss_pred             HHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH---------------H
Confidence            47888998887754333      222566667788777 9999999999999999998766533               4


Q ss_pred             HHHHHHHhhhccCCch
Q psy16704        110 AFSETVKEFDSISRLD  125 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD  125 (146)
                      .+.+++..|.+..+++
T Consensus        76 ~~~~a~~~~~~~~~~~   91 (99)
T 2kc7_A           76 MVMDILNFYNKDMYNQ   91 (99)
T ss_dssp             HHHHHHHHHCCTTHHH
T ss_pred             HHHHHHHHHHHHhccC
Confidence            5555666666655544

>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A

Probab=91.64  E-value=1.3  Score=32.45  Aligned_cols=93  Identities=14%  Similarity=0.112  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHH-----
Q psy16704         30 RIVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESL-----  103 (146)
Q Consensus        30 ~~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAv-----  103 (146)
                      -.+|++.|+++.+..-+++.    +.+-++.-|.|+.-. |...|...++++.+.+|.-....+..+..+.+-.-     
T Consensus        20 ~~~A~~~~~~~~~~~p~~~~----~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~   95 (225)
T 2yhc_A           20 WRQAITQLEALDNRYPFGPY----SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSA   95 (225)
T ss_dssp             HHHHHHHHHHHHHHCTTSTT----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHhCCCChH----HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhh
Confidence            36799999999876544442    335566677888887 99999999999999999988776776666554321     


Q ss_pred             ---------hhcCHHHHHHHHHhhhccCCchH
Q psy16704        104 ---------EEEDSDAFSETVKEFDSISRLDQ  126 (146)
Q Consensus       104 ---------e~~D~e~Ft~aV~eYD~isrLD~  126 (146)
                               ...+...+.+++..|+++-+.++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P  127 (225)
T 2yhc_A           96 LQGFFGVDRSDRDPQQARAAFSDFSKLVRGYP  127 (225)
T ss_dssp             ------------CCHHHHHHHHHHHHHHTTCT
T ss_pred             hhhhhccchhhcCcHHHHHHHHHHHHHHHHCc
Confidence                     11245677788888877766543

>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}

Probab=88.11  E-value=3.8  Score=26.49  Aligned_cols=81  Identities=10%  Similarity=0.125  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|++.|++..+..=+++       +.+..-|.|++-. +...|...+++-.+++|.....     ...+-.+...  ..
T Consensus        21 ~~A~~~~~~al~~~p~~~-------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----~~~lg~~~~~--~~   86 (126)
T 3upv_A           21 PNAVKAYTEMIKRAPEDA-------RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRA-----YIRKATAQIA--VK   86 (126)
T ss_dssp             HHHHHHHHHHHHHCTTCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHH--TT
T ss_pred             HHHHHHHHHHHHhCCCCh-------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHH-----HHHHHHHHHH--Hh
Confidence            578899998877654442       6677778888887 9999999999999999987432     2222222222  23


Q ss_pred             HHHHHHHhhhccCCch
Q psy16704        110 AFSETVKEFDSISRLD  125 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD  125 (146)
                      .+.+++..|.+.-+++
T Consensus        87 ~~~~A~~~~~~al~~~  102 (126)
T 3upv_A           87 EYASALETLDAARTKD  102 (126)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhC
Confidence            4677888888777777

>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}

Probab=87.44  E-value=0.95  Score=28.20  Aligned_cols=51  Identities=6%  Similarity=-0.011  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ   88 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~   88 (146)
                      .+|.+.|++..+..=++       .+.+..-|.|++.. +...|...+++..+.+|...
T Consensus        21 ~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~   72 (111)
T 2l6j_A           21 REAVHCYDQLITAQPQN-------PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAE   72 (111)
T ss_dssp             HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTT
T ss_pred             HHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcc
Confidence            57889999887764433       35567778888888 99999999999999999983

>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}

Probab=86.68  E-value=2.7  Score=30.87  Aligned_cols=89  Identities=8%  Similarity=0.019  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhh----
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEE----  105 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~----  105 (146)
                      .+|++.|+++.+..=+++   + +-+.++.-|.|++-. |...|...+++..+.+|.-....+..+..+.+  ...    
T Consensus        32 ~~A~~~~~~~l~~~p~~~---~-~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~--~~~~~~~  105 (261)
T 3qky_A           32 DRAIEYFKAVFTYGRTHE---W-AADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMC--YYKLSPP  105 (261)
T ss_dssp             HHHHHHHHHHGGGCSCST---T-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHH--HHHHCCC
T ss_pred             HHHHHHHHHHHHhCCCCc---c-hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHH--HHHhccc
Confidence            579999999877654443   2 245567777888877 99999999999999999876666654444433  322    


Q ss_pred             --cCHHHHHHHHHhhhccCCch
Q psy16704        106 --EDSDAFSETVKEFDSISRLD  125 (146)
Q Consensus       106 --~D~e~Ft~aV~eYD~isrLD  125 (146)
                        .|...+.+++..|+++-+++
T Consensus       106 ~~~~~~~~~~A~~~~~~~l~~~  127 (261)
T 3qky_A          106 YELDQTDTRKAIEAFQLFIDRY  127 (261)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHC
T ss_pred             ccccchhHHHHHHHHHHHHHHC
Confidence              23566667777776665443

>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}

Probab=84.62  E-value=5.8  Score=29.03  Aligned_cols=96  Identities=7%  Similarity=-0.024  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcccchhhchhHHh-----------HHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHH
Q psy16704         28 TFRIVYSLLFYSTGKAATENSLMKYNSKEYF-----------FKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKF   95 (146)
Q Consensus        28 ~~~~~A~eiyE~VA~~sl~n~LlKysaKeyf-----------fkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~kl   95 (146)
                      .--.+|.+.|+++.+..=+++... .+..+.           +.-|.|+.-. |...|...+++..+.+|.-....+.-+
T Consensus       111 ~~~~~A~~~~~~~l~~~p~~~~~~-~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~  189 (261)
T 3qky_A          111 TDTRKAIEAFQLFIDRYPNHELVD-DATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALV  189 (261)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHCcCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHH
Confidence            344689999999988776665432 222222           7778888888 999999999999999998766555544


Q ss_pred             HHHHHHHHhhc--------CHHHHHHHHHhhhccCCchH
Q psy16704         96 LLKLIESLEEE--------DSDAFSETVKEFDSISRLDQ  126 (146)
Q Consensus        96 L~~LieAve~~--------D~e~Ft~aV~eYD~isrLD~  126 (146)
                      ..  ..+....        ..+.+.+++..|+++-+.++
T Consensus       190 ~l--~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p  226 (261)
T 3qky_A          190 GA--MRAYIAYAEQSVRARQPERYRRAVELYERLLQIFP  226 (261)
T ss_dssp             HH--HHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred             HH--HHHHHHhcccchhhcccchHHHHHHHHHHHHHHCC
Confidence            33  3333221        33778888888887765543

>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}

Probab=83.70  E-value=2.8  Score=26.87  Aligned_cols=67  Identities=12%  Similarity=-0.070  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHh
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE  104 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve  104 (146)
                      .+|.+.|++..+..-++       -+.+..-|.|+... +...|...+++-.+.+|...+....+-+...+..+.
T Consensus        36 ~~A~~~~~~al~~~p~~-------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~  103 (115)
T 2kat_A           36 DAALPHLRAALDFDPTY-------SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLA  103 (115)
T ss_dssp             HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhc
Confidence            45666666665543221       22334445555555 777777777777776666555554444444444443

>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1

Probab=83.63  E-value=3.9  Score=27.34  Aligned_cols=82  Identities=15%  Similarity=0.023  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|.+.|++..+..=++       -+.++.-|.|+.-. +...|..++++-.++||.....+.     .+-.+.  ....
T Consensus        34 ~~A~~~~~~al~~~P~~-------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~-----~la~~~--~~~g   99 (121)
T 1hxi_A           34 AEAALAFEAVCQKEPER-------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHA-----ALAVSH--TNEH   99 (121)
T ss_dssp             HHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH-----HHHHHH--HHHH
T ss_pred             HHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH-----HHHHHH--HHcC
Confidence            67889999887754443       24556667777777 999999999999999999865432     222222  1245


Q ss_pred             HHHHHHHhhhccCCchH
Q psy16704        110 AFSETVKEFDSISRLDQ  126 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD~  126 (146)
                      .+.+++..|++.-++++
T Consensus       100 ~~~~A~~~~~~al~~~P  116 (121)
T 1hxi_A          100 NANAALASLRAWLLSQP  116 (121)
T ss_dssp             HHHHHHHHHHHHHC---
T ss_pred             CHHHHHHHHHHHHHhCc
Confidence            67778888777666654

>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}

Probab=81.96  E-value=8.4  Score=25.88  Aligned_cols=93  Identities=11%  Similarity=0.142  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|++.|++.-+..=++       -+.++.-|.|++-. +...|...+++-.++||.+....     ..+-.+..  ...
T Consensus        30 ~~A~~~~~~al~~~p~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~-----~~lg~~~~--~~~   95 (126)
T 4gco_A           30 PTAMRHYNEAVKRDPEN-------AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGY-----IRKAACLV--AMR   95 (126)
T ss_dssp             HHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH-----HHHHHHHH--HTT
T ss_pred             HHHHHHHHHHHHhCCCC-------HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHH-----HHHHHHHH--HCC
Confidence            47888898876654333       35667778888887 99999999999999999985432     22222222  234


Q ss_pred             HHHHHHHhhhccCCchHHHHHHHHHHHh
Q psy16704        110 AFSETVKEFDSISRLDQWYTTMLLKIKR  137 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD~WKT~mLLkIKk  137 (146)
                      .|.+++..|.+.-++|+=-......+.+
T Consensus        96 ~~~~A~~~~~~al~l~P~~~~a~~~l~~  123 (126)
T 4gco_A           96 EWSKAQRAYEDALQVDPSNEEAREGVRN  123 (126)
T ss_dssp             CHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence            5778999999888888766665555544

>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}

Probab=81.33  E-value=3.3  Score=26.79  Aligned_cols=65  Identities=3%  Similarity=-0.035  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIES  102 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieA  102 (146)
                      .+|.+.|++..+..=++      . +.++.-|.|+... +...|...+++..+.+|++.++....-+...+..
T Consensus        55 ~~A~~~~~~al~~~p~~------~-~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~  120 (126)
T 3upv_A           55 PEAIADCNKAIEKDPNF------V-RAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYK  120 (126)
T ss_dssp             HHHHHHHHHHHHHCTTC------H-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCc------H-HHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHH
Confidence            57888898887654332      2 3455666677776 9999999999999999877665554444444433

>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}

Probab=81.11  E-value=11  Score=25.67  Aligned_cols=95  Identities=11%  Similarity=0.035  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|++.|++..+..=++       -+.+..-+.|++-. +...|...+++-.+++|.....     ...+-.+...  ..
T Consensus        28 ~~A~~~~~~al~~~p~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----~~~lg~~~~~--~g   93 (164)
T 3sz7_A           28 SKAIDLYTQALSIAPAN-------PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKA-----WSRLGLARFD--MA   93 (164)
T ss_dssp             HHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHH--TT
T ss_pred             HHHHHHHHHHHHhCCcC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHH--cc
Confidence            57889999887765443       35677778888887 9999999999999999987422     2223333222  23


Q ss_pred             HHHHHHHhhhccCCch-----HHHHHHHHHHHhhc
Q psy16704        110 AFSETVKEFDSISRLD-----QWYTTMLLKIKRQI  139 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD-----~WKT~mLLkIKk~I  139 (146)
                      .+.+++..|.+.-+++     .|...-+.++++.+
T Consensus        94 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~  128 (164)
T 3sz7_A           94 DYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKI  128 (164)
T ss_dssp             CHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Confidence            3556666666554444     45555566666555

>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}

Probab=80.21  E-value=6.5  Score=24.99  Aligned_cols=102  Identities=10%  Similarity=0.037  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|.+.|+++.+..-+++.   . .+.++.-|.|+.-. |...|...+++..+.+|.....-+..+....+- .+.|+.+
T Consensus        19 ~~A~~~~~~~~~~~p~~~~---~-~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~-~~~g~~~   93 (129)
T 2xev_A           19 DDASQLFLSFLELYPNGVY---T-PNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQ-YGEGKNT   93 (129)
T ss_dssp             HHHHHHHHHHHHHCSSSTT---H-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH-HHTTCHH
T ss_pred             HHHHHHHHHHHHHCCCCcc---c-HHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHH-HHcCCHH
Confidence            5889999998887666542   1 24556667788777 999999999999999998866555555444433 3567765


Q ss_pred             HHHHHHHhhhccCCchHHHHHHHHHHHh
Q psy16704        110 AFSETVKEFDSISRLDQWYTTMLLKIKR  137 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD~WKT~mLLkIKk  137 (146)
                      .=.+...+.-+..+=+++-.....++++
T Consensus        94 ~A~~~~~~~~~~~p~~~~~~~a~~~l~~  121 (129)
T 2xev_A           94 EAQQTLQQVATQYPGSDAARVAQERLQS  121 (129)
T ss_dssp             HHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence            5444444433344445555555555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	146
d1qqea_	290	a.118.8.1 (A:) Vesicular transport protein sec17 {	4e-25

>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 290

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Vesicular transport protein sec17
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.0 bits (235), Expect = 4e-25
 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 1/105 (0%)

Query: 41  GKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKL 99
            K++  N L +++ K+YF K GLC L   D +   + L       P F D+RE  FL  L
Sbjct: 185 IKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSL 244

Query: 100 IESLEEEDSDAFSETVKEFDSISRLDQWYTTMLLKIKRQISTNED 144
           I+++ E DS+  SE  KEFD+  RLD+W  T+L KIK  I   ED
Sbjct: 245 IDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQED 289

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	146
d1qqea_	290	Vesicular transport protein sec17 {Baker's yeast (	99.91
d1eyva_	131	Antitermination factor NusB {Mycobacterium tubercu	86.9
d1ey1a_	139	Antitermination factor NusB {Escherichia coli [Tax	85.82
d2c2la1	201	STIP1 homology and U box-containing protein 1, STU	83.93
d1qqea_	290	Vesicular transport protein sec17 {Baker's yeast (	83.21
d1elwa_	117	Hop {Human (Homo sapiens) [TaxId: 9606]}	82.32
d1nzna_	122	Mitochondria fission protein Fis1 {Human (Homo sap	80.84
d1tzva_	141	Antitermination factor NusB {Thermotoga maritima [	80.56

>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Vesicular transport protein sec17
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=4.5e-25  Score=172.37  Aligned_cols=112  Identities=38%  Similarity=0.619  Sum_probs=100.4

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|++.|+++++...+++.++++++.+++++++|+++. |...|.++++++.+.||+|.+|||++++.++++|++++|.+
T Consensus       175 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~A~~~~~~~~~~~~~~~~sre~~~l~~l~~a~~~~d~e  254 (290)
T d1qqea_         175 IEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSE  254 (290)
T ss_dssp             HHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHhCccchhhhhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHHhcCHH
Confidence            68999999999999999999999999999999999998 99999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhccCCchHHHHHHHHHHHhhcCCC
Q psy16704        110 AFSETVKEFDSISRLDQWYTTMLLKIKRQISTN  142 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD~WKT~mLLkIKk~I~~~  142 (146)
                      +|+++|++||++++||+|+|.+|.+||+++++.
T Consensus       255 ~~~eai~~y~~~~~lD~~~~~~L~~~k~~le~~  287 (290)
T d1qqea_         255 QLSEHCKEFDNFMRLDKWKITILNKIKESIQQQ  287 (290)
T ss_dssp             THHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHhhccc
Confidence            999999999999999999999999999999763

>d1eyva_ a.79.1.1 (A:) Antitermination factor NusB {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: NusB-like
superfamily: NusB-like
family: Antitermination factor NusB
domain: Antitermination factor NusB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.90  E-value=0.22  Score=33.80  Aligned_cols=59  Identities=7%  Similarity=0.106  Sum_probs=47.3

Q ss_pred             hcccchhhchhH------HhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHH
Q psy16704         45 TENSLMKYNSKE------YFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESL  103 (146)
Q Consensus        45 l~n~LlKysaKe------yffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAv  103 (146)
                      +++.+-+|+.+.      -.|+.|++.+.. +.+-...++++|.++--.|.+.++++|+.++++.+
T Consensus        65 I~~~l~~~~~~~l~~i~~~iLr~a~~El~~~~~~p~~viInE~V~lak~~~~~~~~kfiNaVL~ki  130 (131)
T d1eyva_          65 ITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQV  130 (131)
T ss_dssp             HHTTSTTCCGGGSCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred             HHHhhhhhHHHHhhHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHHhCCCcccchhHHHHHhc
Confidence            344444565543      488999999886 77778889999999999999999999999998754

>d1ey1a_ a.79.1.1 (A:) Antitermination factor NusB {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: NusB-like
superfamily: NusB-like
family: Antitermination factor NusB
domain: Antitermination factor NusB
species: Escherichia coli [TaxId: 562]

Probab=85.82  E-value=0.44  Score=32.52  Aligned_cols=68  Identities=16%  Similarity=0.188  Sum_probs=52.3

Q ss_pred             HHHHHHHhhcccchhhchhH-HhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHh
Q psy16704         37 FYSTGKAATENSLMKYNSKE-YFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLE  104 (146)
Q Consensus        37 yE~VA~~sl~n~LlKysaKe-yffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve  104 (146)
                      .+.+-...+++++=+.+.-+ -.|+.|+|.|.. +.+..+-++++|.++--.|.+..+++|+.++++.+-
T Consensus        62 id~~I~~~l~~~~~r~~~~~~~ILr~a~~El~~~~~~p~~viInE~Velak~~~~~~~~~fVNgVL~~i~  131 (139)
T d1ey1a_          62 LDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAA  131 (139)
T ss_dssp             HHHHHTTCCCSCTTTSCHHHHHHHHHHHHHHHSCSSCCSHHHHHHHHHHTTTTTCSSSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHhcChHHHHHHHHHHHHHHHccCCCceehHHHHHHHHHHhCCCCccchHHHHHHHHH
Confidence            44445555555554544433 467888888887 778888999999999999999999999999998764

>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: STIP1 homology and U box-containing protein 1, STUB1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.93  E-value=1.3  Score=29.37  Aligned_cols=53  Identities=11%  Similarity=0.064  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccc
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDT   90 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~S   90 (146)
                      ..|++.|++.....=+|       -..+.+-|.|++-. +...|-..+++-.++||.+...
T Consensus        21 ~~Ai~~~~kal~~~p~~-------~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a   74 (201)
T d2c2la1          21 PEAAACYGRAITRNPLV-------AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKA   74 (201)
T ss_dssp             HHHHHHHHHHHHHCSCC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHH
T ss_pred             HHHHHHHHHHHHhCCCC-------HHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHH
Confidence            46888888876653222       35667778888888 9999999999999999998654

>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Vesicular transport protein sec17
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.21  E-value=1.1  Score=32.58  Aligned_cols=73  Identities=16%  Similarity=0.122  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCc-cchHHHHHHHHHHHHh
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQ-DTREYKFLLKLIESLE  104 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~-~SRE~klL~~LieAve  104 (146)
                      ..|++.|++.+.-....+ -+.++-..+.++|-|+.-. |...|-.+.++-.++.+... .+.....+..+.+..+
T Consensus        54 ~~A~~~y~kA~~~~~~~~-~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~  128 (290)
T d1qqea_          54 NLAGDSFLKAADYQKKAG-NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE  128 (290)
T ss_dssp             HHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHh
Confidence            356677777666544333 2456677888999998877 88888888887777777774 4555666777777664

>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=3.8  Score=25.94  Aligned_cols=92  Identities=11%  Similarity=0.075  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhcCHH
Q psy16704         31 IVYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEEDSD  109 (146)
Q Consensus        31 ~~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~D~e  109 (146)
                      .+|++.|++.-+..=+++       +.+..-|.|++.. +...|-..+++..++||.....     ...+-.+...  .+
T Consensus        20 ~eAi~~~~~al~~~p~~~-------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----~~~~g~~~~~--~~   85 (117)
T d1elwa_          20 DDALQCYSEAIKLDPHNH-------VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKG-----YSRKAAALEF--LN   85 (117)
T ss_dssp             HHHHHHHHHHHHHCTTCH-------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHH--TT
T ss_pred             HHHHHHHHHHHhcCCcch-------hhhhcccccccccccccccchhhhhHHHhccchhhH-----HHHHHHHHHH--cc
Confidence            478899998877654443       4556667788887 9999999999999999986532     2222222222  34


Q ss_pred             HHHHHHHhhhccCCchHHHHHHHHHHH
Q psy16704        110 AFSETVKEFDSISRLDQWYTTMLLKIK  136 (146)
Q Consensus       110 ~Ft~aV~eYD~isrLD~WKT~mLLkIK  136 (146)
                      .+.+++..|.+..++|+=...+...++
T Consensus        86 ~~~~A~~~~~~a~~~~p~~~~~~~~l~  112 (117)
T d1elwa_          86 RFEEAKRTYEEGLKHEANNPQLKEGLQ  112 (117)
T ss_dssp             CHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence            677888888888887765555544443

>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Mitochondria fission protein Fis1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.84  E-value=0.89  Score=30.19  Aligned_cols=55  Identities=9%  Similarity=0.154  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHhhcccchhhchhHHhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccch
Q psy16704         32 VYSLLFYSTGKAATENSLMKYNSKEYFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTR   91 (146)
Q Consensus        32 ~A~eiyE~VA~~sl~n~LlKysaKeyffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SR   91 (146)
                      .|+++|+++....-     +..-.+.++.-|.|+.-. |...|.+.+++-.++||++..-+
T Consensus        54 ~Ai~~l~~~l~~~~-----~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~  109 (122)
T d1nzna_          54 KGIVLLEELLPKGS-----KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAK  109 (122)
T ss_dssp             HHHHHHHHHTTTSC-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred             HHHHHHHHHHhccC-----CchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence            58888888653211     122346788899999988 99999999999999999997544

>d1tzva_ a.79.1.1 (A:) Antitermination factor NusB {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: NusB-like
superfamily: NusB-like
family: Antitermination factor NusB
domain: Antitermination factor NusB
species: Thermotoga maritima [TaxId: 2336]

Probab=80.56  E-value=1.1  Score=30.37  Aligned_cols=50  Identities=10%  Similarity=0.254  Sum_probs=43.3

Q ss_pred             HhHHhHHHHHhc-chhHHHHHHhHHHhcCCCCccchHHHHHHHHHHHHhhc
Q psy16704         57 YFFKAGLCHLCI-DLLNCQQALSRYIDLSPAFQDTREYKFLLKLIESLEEE  106 (146)
Q Consensus        57 yffkA~LC~L~~-D~v~a~~ale~Y~~~DPsF~~SRE~klL~~LieAve~~  106 (146)
                      -.|+.|+|++.. +.+-...++++|.++--.|.+..+++|+.++++.+-.+
T Consensus        83 ~iLr~a~~El~~~~~~p~~v~InEaVelak~~~~~~~~~fVNaVL~~i~r~  133 (141)
T d1tzva_          83 NVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIAKE  133 (141)
T ss_dssp             HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccchhHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH
Confidence            577788899887 77888889999999999999999999999999876543