Psyllid ID: psy16716

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-
VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTAKRSTYLN
cHHHHHHHHcccccccccHHHHccccHHHHHHHHHccccccccccEEcccccEEEccEEEccccEEEEEEccccccccccccccccccccccccccccccccEEEccHHHHHHHHHHccccccccHHcccccHHHHccccc
cHHHHHHHHcccccccccHHHHHHcHHHHHHHHHHHHccccccHHHEEccccEEEccEEEccccEEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHccEcccccccEEEEEEEEEccccEEcc
VYHELQDvlgdspdsaptydqlQRLDLLTRVIKETMrlfpaapviarsapyevqcgdytipagASIAIFIYGlhrhpqlwnnpnqfdpdrflpsqsshrnpsaMSVIVTLDALRLRTICNMRASIAifsgqntakrstyln
vyhelqdvlgdspdsaptydqlqRLDLLTRVIKETMRlfpaapviarSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPsqsshrnpsAMSVIVTLDALRLRTICNMRAsiaifsgqntakrstyln
VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTAKRSTYLN
*******************DQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNN**********************SVIVTLDALRLRTICNMRASIAIFS************
VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTA*******
VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTAKRSTYLN
VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTAKRSTYLN
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTAKRSTYLN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query141 2.2.26 [Sep-21-2011]
Q5RCN6525 Cytochrome P450 4V2 OS=Po yes N/A 0.723 0.194 0.427 2e-18
Q6ZWL3525 Cytochrome P450 4V2 OS=Ho yes N/A 0.723 0.194 0.427 2e-18
Q964T1501 Cytochrome P450 4c21 OS=B N/A N/A 0.716 0.201 0.411 3e-17
P29981511 Cytochrome P450 4C1 OS=Bl N/A N/A 0.723 0.199 0.407 4e-17
Q9VA27535 Cytochrome P450 4c3 OS=Dr yes N/A 0.730 0.192 0.378 5e-17
Q9V3S0556 Cytochrome P450 4g1 OS=Dr no N/A 0.709 0.179 0.372 1e-16
Q9W011510 Probable cytochrome P450 no N/A 0.730 0.201 0.446 2e-16
Q6A152507 Cytochrome P450 4X1 OS=Mu yes N/A 0.687 0.191 0.411 4e-16
A2RRT9525 Cytochrome P450 4V2 OS=Ra yes N/A 0.702 0.188 0.41 5e-16
Q9DBW0525 Cytochrome P450 4V2 OS=Mu no N/A 0.723 0.194 0.398 8e-16
>sp|Q5RCN6|CP4V2_PONAB Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2 SV=1 Back     alignment and function desciption
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 1   VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
           V HEL DV G S D   T + L++L  L  VIKET+RLFP+ P+ ARS   + +   Y +
Sbjct: 355 VDHELDDVFGKS-DRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRV 413

Query: 61  PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
             G    I  Y LHR P+ + NP +F P+RF P  +  R+P A
Sbjct: 414 LKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQGRHPYA 456
Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.
Pongo abelii (taxid: 9601)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: -
>sp|Q6ZWL3|CP4V2_HUMAN Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=2 Back     alignment and function description
>sp|Q964T1|CP4CU_BLAGE Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1 Back     alignment and function description
>sp|P29981|CP4C1_BLADI Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP4C1 PE=2 SV=1 Back     alignment and function description
>sp|Q9VA27|CP4C3_DROME Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1 Back     alignment and function description
>sp|Q9V3S0|CP4G1_DROME Cytochrome P450 4g1 OS=Drosophila melanogaster GN=Cyp4g1 PE=2 SV=1 Back     alignment and function description
>sp|Q9W011|C4D20_DROME Probable cytochrome P450 4d20 OS=Drosophila melanogaster GN=Cyp4d20 PE=3 SV=1 Back     alignment and function description
>sp|Q6A152|CP4X1_MOUSE Cytochrome P450 4X1 OS=Mus musculus GN=Cyp4x1 PE=1 SV=1 Back     alignment and function description
>sp|A2RRT9|CP4V2_RAT Cytochrome P450 4V2 OS=Rattus norvegicus GN=Cyp4v2 PE=2 SV=1 Back     alignment and function description
>sp|Q9DBW0|CP4V2_MOUSE Cytochrome P450 4V2 OS=Mus musculus GN=Cyp4v2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query141
241694810 422 P450 CYP319A1, putative [Ixodes scapular 0.716 0.239 0.475 8e-23
307170230 508 Cytochrome P450 4C1 [Camponotus floridan 0.723 0.200 0.466 2e-22
307181862 472 Cytochrome P450 4V3 [Camponotus floridan 0.723 0.216 0.466 3e-22
270009257 501 cytochrome P450-like protein [Tribolium 0.702 0.197 0.47 5e-21
322801836 444 hypothetical protein SINV_03570 [Solenop 0.723 0.229 0.436 9e-21
270008720 814 hypothetical protein TcasGA2_TC015295 [T 0.702 0.121 0.475 5e-20
189238163 420 PREDICTED: similar to cytochrome P450 [T 0.702 0.235 0.475 7e-20
322784817 465 hypothetical protein SINV_05526 [Solenop 0.723 0.219 0.475 8e-20
17511262 501 insecticide resistance-associated cytoch 0.723 0.203 0.456 9e-20
91084353 488 PREDICTED: similar to cytochrome P450 [T 0.702 0.202 0.445 2e-19
>gi|241694810|ref|XP_002413005.1| P450 CYP319A1, putative [Ixodes scapularis] gi|215506819|gb|EEC16313.1| P450 CYP319A1, putative [Ixodes scapularis] Back     alignment and taxonomy information
 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 68/101 (67%)

Query: 1   VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
           V+ EL  ++GD P+   T + L++L  L RVIKE  RL+P+ P+I R+A  + + G + I
Sbjct: 248 VHEELDAIVGDEPEKNITLEDLKKLTYLDRVIKECQRLYPSVPLIGRTASEDFEMGGHLI 307

Query: 61  PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNP 101
           PAGA+I +FIY LHR P ++  P +FDPDRFLP  S  R+P
Sbjct: 308 PAGANIGVFIYALHRDPDVFPKPEEFDPDRFLPENSEKRHP 348

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307170230|gb|EFN62598.1| Cytochrome P450 4C1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307181862|gb|EFN69302.1| Cytochrome P450 4V3 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|270009257|gb|EFA05705.1| cytochrome P450-like protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|322801836|gb|EFZ22408.1| hypothetical protein SINV_03570 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|270008720|gb|EFA05168.1| hypothetical protein TcasGA2_TC015295 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|189238163|ref|XP_001814854.1| PREDICTED: similar to cytochrome P450 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|322784817|gb|EFZ11612.1| hypothetical protein SINV_05526 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|17511262|gb|AAF67724.2| insecticide resistance-associated cytochrome P450 [Diabrotica virgifera virgifera] Back     alignment and taxonomy information
>gi|91084353|ref|XP_973153.1| PREDICTED: similar to cytochrome P450 [Tribolium castaneum] gi|270009263|gb|EFA05711.1| cytochrome P450 349A1 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query141
UNIPROTKB|Q6ZWL3525 CYP4V2 "Cytochrome P450 4V2" [ 0.723 0.194 0.427 1.1e-16
UNIPROTKB|Q5RCN6525 CYP4V2 "Cytochrome P450 4V2" [ 0.723 0.194 0.427 1.1e-16
UNIPROTKB|F1ME58514 CYP4A11 "Uncharacterized prote 0.659 0.180 0.406 2.1e-16
UNIPROTKB|F1S3X2296 LOC100621142 "Uncharacterized 0.659 0.314 0.395 2.9e-16
FB|FBgn0035344510 Cyp4d20 "Cyp4d20" [Drosophila 0.716 0.198 0.485 3.6e-16
UNIPROTKB|F1S3X1448 LOC100627844 "Uncharacterized 0.659 0.207 0.395 7.1e-16
UNIPROTKB|F1S3X3449 LOC100737897 "Uncharacterized 0.659 0.207 0.395 7.2e-16
UNIPROTKB|E1BYW5530 CYP4V2 "Uncharacterized protei 0.723 0.192 0.378 8.2e-16
UNIPROTKB|I3LEI7504 CYP4A24 "Cytochrome P450 4A24" 0.659 0.184 0.395 9.5e-16
UNIPROTKB|Q8SPK1504 CYP4A24 "Cytochrome P450 4A24" 0.659 0.184 0.395 9.5e-16
UNIPROTKB|Q6ZWL3 CYP4V2 "Cytochrome P450 4V2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 214 (80.4 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 44/103 (42%), Positives = 59/103 (57%)

Query:     1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
             V HEL DV G S D   T + L++L  L  VIKET+RLFP+ P+ ARS   + +   Y +
Sbjct:   355 VDHELDDVFGKS-DRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRV 413

Query:    61 PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSA 103
               G    I  Y LHR P+ + NP +F P+RF P  +  R+P A
Sbjct:   414 LKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQGRHPYA 456
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0004497 "monooxygenase activity" evidence=IEA
GO:0007601 "visual perception" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0050896 "response to stimulus" evidence=IEA
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
GO:0010430 "fatty acid omega-oxidation" evidence=IDA
UNIPROTKB|Q5RCN6 CYP4V2 "Cytochrome P450 4V2" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
UNIPROTKB|F1ME58 CYP4A11 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1S3X2 LOC100621142 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0035344 Cyp4d20 "Cyp4d20" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1S3X1 LOC100627844 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1S3X3 LOC100737897 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYW5 CYP4V2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|I3LEI7 CYP4A24 "Cytochrome P450 4A24" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q8SPK1 CYP4A24 "Cytochrome P450 4A24" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query141
pfam00067461 pfam00067, p450, Cytochrome P450 5e-28
PLN02936489 PLN02936, PLN02936, epsilon-ring hydroxylase 1e-20
PLN02655466 PLN02655, PLN02655, ent-kaurene oxidase 1e-18
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 5e-18
PLN02290516 PLN02290, PLN02290, cytokinin trans-hydroxylase 3e-17
PLN02687517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 1e-15
PLN02738633 PLN02738, PLN02738, carotene beta-ring hydroxylase 3e-15
PLN02394503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 1e-13
PTZ00404482 PTZ00404, PTZ00404, cytochrome P450; Provisional 5e-13
PLN03112514 PLN03112, PLN03112, cytochrome P450 family protein 4e-11
PLN02302490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 2e-10
PLN00110504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 3e-10
PLN02183516 PLN02183, PLN02183, ferulate 5-hydroxylase 6e-10
PLN02966502 PLN02966, PLN02966, cytochrome P450 83A1 7e-09
PLN03234499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 1e-08
PLN00168519 PLN00168, PLN00168, Cytochrome P450; Provisional 4e-08
PLN02196463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 1e-07
PLN03018534 PLN03018, PLN03018, homomethionine N-hydroxylase 2e-07
PLN02971543 PLN02971, PLN02971, tryptophan N-hydroxylase 4e-07
PLN02500490 PLN02500, PLN02500, cytochrome P450 90B1 2e-05
PLN02426502 PLN02426, PLN02426, cytochrome P450, family 94, su 6e-05
PLN03195516 PLN03195, PLN03195, fatty acid omega-hydroxylase; 3e-04
PLN02169500 PLN02169, PLN02169, fatty acid (omega-1)-hydroxyla 9e-04
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information 
 Score =  106 bits (267), Expect = 5e-28
 Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 3/105 (2%)

Query: 1   VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYT 59
           +  E+ +V+GD    +PTYD LQ +  L  VIKET+RL P  P+ + R    +     Y 
Sbjct: 298 LREEIDEVIGD--KRSPTYDDLQNMPYLDAVIKETLRLHPVVPLLLPREVTKDTVIPGYL 355

Query: 60  IPAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAM 104
           IP G  + + +Y LHR P+++ NP +FDP+RFL      R   A 
Sbjct: 356 IPKGTLVIVNLYALHRDPEVFPNPEEFDPERFLDENGKFRKSFAF 400

Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures. Length = 461
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1 Back     alignment and domain information
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 141
KOG0156|consensus489 100.0
KOG0158|consensus499 100.0
PLN02500490 cytochrome P450 90B1 100.0
PLN02971543 tryptophan N-hydroxylase 100.0
PLN02183516 ferulate 5-hydroxylase 100.0
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 100.0
PLN02394503 trans-cinnamate 4-monooxygenase 100.0
PTZ00404482 cytochrome P450; Provisional 99.98
PLN00168519 Cytochrome P450; Provisional 99.98
PLN02290516 cytokinin trans-hydroxylase 99.98
PLN02774463 brassinosteroid-6-oxidase 99.97
PLN03234499 cytochrome P450 83B1; Provisional 99.97
PLN02966502 cytochrome P450 83A1 99.97
KOG0159|consensus519 99.97
PLN02738633 carotene beta-ring hydroxylase 99.97
PLN00110504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.97
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.97
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.97
PLN02655466 ent-kaurene oxidase 99.97
PLN03195516 fatty acid omega-hydroxylase; Provisional 99.97
PLN02687517 flavonoid 3'-monooxygenase 99.97
PLN03018534 homomethionine N-hydroxylase 99.97
KOG0157|consensus497 99.97
PLN02426502 cytochrome P450, family 94, subfamily C protein 99.97
PLN03112514 cytochrome P450 family protein; Provisional 99.97
PLN02196463 abscisic acid 8'-hydroxylase 99.97
PLN02648480 allene oxide synthase 99.97
PLN02987472 Cytochrome P450, family 90, subfamily A 99.97
PLN02302490 ent-kaurenoic acid oxidase 99.96
PLN02936489 epsilon-ring hydroxylase 99.96
KOG0684|consensus486 99.95
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.9
>KOG0156|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.6e-37  Score=235.96  Aligned_cols=123  Identities=31%  Similarity=0.664  Sum_probs=115.3

Q ss_pred             CHHHHHHHhCCCCCCCCCHHHhccCHHHHHHHHHhhcCCCCCCc-ceeecCceeeECCEEeCCCCEEEEcchhhhcCCCC
Q psy16716          1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL   79 (141)
Q Consensus         1 l~~Ei~~~l~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~-~~r~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~   79 (141)
                      +|+||+++++.+  ..++.+|+.++|||+|+|+|++|+||++|. ++|.+++|+.++||.|||||.|+++.|++|+||++
T Consensus       323 ~qeEId~vvG~~--r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~v  400 (489)
T KOG0156|consen  323 LQEEIDEVVGKG--RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKV  400 (489)
T ss_pred             HHHHHHHHhCCC--CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCcc
Confidence            589999999984  558999999999999999999999999998 69999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCCCC-CCCCCCCeeeecccCcccccceeeeccceeeeccCcccccccccc
Q psy16716         80 WNNPNQFDPDRFLPSQ-SSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTAKRSTYL  140 (141)
Q Consensus        80 w~~p~~f~P~Rfl~~~-~~~~~~~~~~pfg~g~~~~~~~~c~~~~~~~~~~G~~~a~~e~~~  140 (141)
                      |+||++|+||||++++ .+. ....++|||.|     +|.|         ||+.||.+|+++
T Consensus       401 w~dP~eF~PERFl~~~d~~~-~~~~~iPFG~G-----RR~C---------pG~~La~~~l~l  447 (489)
T KOG0156|consen  401 WEDPEEFKPERFLDSNDGKG-LDFKLIPFGSG-----RRIC---------PGEGLARAELFL  447 (489)
T ss_pred             CCCccccChhhhcCCccccC-CceEecCCCCC-----cCCC---------CcHHHHHHHHHH
Confidence            9999999999999884 444 78899999999     9999         999999999875

>KOG0158|consensus Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>KOG0159|consensus Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>KOG0157|consensus Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>KOG0684|consensus Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query141
1w0e_A485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 2e-12
3ua1_A487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 2e-12
1tqn_A486 Crystal Structure Of Human Microsomal P450 3a4 Leng 2e-12
3dbg_A467 Crystal Structure Of Cytochrome P450 170a1 (Cyp170a 1e-11
3ruk_A494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 1e-10
4dvq_A483 Structure Of Human Aldosterone Synthase, Cyp11b2, I 3e-09
3mzs_A486 Crystal Structure Of Cytochrome P450 Cyp11a1 In Com 4e-09
4dtw_B469 Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Seroto 9e-09
3cbd_A455 Directed Evolution Of Cytochrome P450 Bm3, To Octan 1e-08
3psx_A487 Crystal Structure Of The Kt2 Mutant Of Cytochrome P 2e-08
3na0_A471 Crystal Structure Of Human Cyp11a1 In Complex With 2e-08
2uwh_A458 Cytochrome P450 Bm3 Mutant In Complex With Palmitic 2e-08
1bvy_A458 Complex Of The Heme And Fmn-Binding Domains Of The 3e-08
1p0w_A455 F393w Mutant Heme Domain Of Flavocytochrome P450 Bm 3e-08
1yqo_A455 T268a Mutant Heme Domain Of Flavocytochrome P450 Bm 3e-08
1yqp_A455 T268n Mutant Cytochrome Domain Of Flavocytochrome P 3e-08
2bmh_A455 Modeling Protein-Substrate Interactions In The Heme 3e-08
1p0x_A455 F393y Mutant Heme Domain Of Flavocytochrome P450 Bm 3e-08
1p0v_A455 F393a Mutant Heme Domain Of Flavocytochrome P450 Bm 3e-08
1jme_A455 Crystal Structure Of Phe393his Cytochrome P450 Bm3 3e-08
4duc_A472 Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Leng 3e-08
2x7y_A455 P450 Bm3 F87a In Complex With Dmso Length = 455 3e-08
3dgi_A461 Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Le 3e-08
3ekb_A470 Crystal Structure Of The A264c Mutant Heme Domain O 3e-08
1jpz_A473 Crystal Structure Of A Complex Of The Heme Domain O 3e-08
2hpd_A471 Crystal Structure Of Hemoprotein Domain Of P450bm-3 3e-08
2ij4_A470 Structure Of The A264k Mutant Of Cytochrome P450 Bm 3e-08
1fah_A471 Structure Of Cytochrome P450 Length = 471 3e-08
4duf_A471 Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Seroto 3e-08
3kx5_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 3e-08
3ekf_A470 Crystal Structure Of The A264q Heme Domain Of Cytoc 3e-08
3ben_A470 Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine 3e-08
2ij2_A470 Atomic Structure Of The Heme Domain Of Flavocytochr 3e-08
2ij3_A470 Structure Of The A264h Mutant Of Cytochrome P450 Bm 3e-08
1smi_A471 A Single Mutation Of P450 Bm3 Induces The Conformat 3e-08
4dud_A471 Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Le 3e-08
3kx4_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 3e-08
3kx3_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 3e-08
3ekd_A470 Crystal Structure Of The A264m Heme Domain Of Cytoc 3e-08
2nnb_A471 The Q403k Mutnat Heme Domain Of Flavocytochrome P45 3e-08
3npl_A470 Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme D 3e-08
3hf2_A482 Crystal Structure Of The I401p Mutant Of Cytochrome 4e-08
3n9y_A487 Crystal Structure Of Human Cyp11a1 In Complex With 4e-08
4du2_B470 Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamin 5e-08
1zo4_A473 Crystal Structure Of A328s Mutant Of The Heme Domai 6e-08
3m4v_A482 Crystal Structure Of The A330p Mutant Of Cytochrome 7e-08
3ld6_A461 Crystal Structure Of Human Lanosterol 14alpha-Demet 8e-08
4dub_A472 Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopami 8e-08
4dua_A471 Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Leng 8e-08
1zoa_A473 Crystal Structure Of A328v Mutant Of The Heme Domai 9e-08
3qi8_B472 Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) 9e-08
3r9c_A418 Crystal Structure Of Mycobacterium Smegmatis Cyp164 1e-07
2ve3_A444 Retinoic Acid Bound Cyanobacterial Cyp120a1 Length 2e-07
3qz1_A496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 4e-07
3czh_A481 Crystal Structure Of Cyp2r1 In Complex With Vitamin 3e-06
3c6g_A479 Crystal Structure Of Cyp2r1 In Complex With Vitamin 3e-06
3k9v_A482 Crystal Structure Of Rat Mitochondrial P450 24a1 S5 9e-06
2q9f_A456 Crystal Structure Of Human Cytochrome P450 46a1 In 1e-05
2pg6_A476 Crystal Structure Of Human Microsomal P450 2a6 L240 3e-05
1z10_A476 Crystal Structure Of Human Microsomal P450 2a6 With 3e-05
2pg7_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 3e-05
3ebs_A476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 3e-05
2pg5_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 3e-05
1izo_A417 Cytochrome P450 Bs Beta Complexed With Fatty Acid L 3e-05
3awp_A415 Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g Len 1e-04
2hi4_A495 Crystal Structure Of Human Microsomal P450 1a2 In C 1e-04
3vno_A407 Cytochrome P450sp Alpha (cyp152b1) Mutant R241e Len 3e-04
3awm_A415 Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With P 3e-04
3voo_A407 Cytochrome P450sp Alpha (cyp152b1) Mutant A245e Len 3e-04
3vm4_A407 Cytochrome P450sp Alpha (Cyp152b1) In Complex With 3e-04
3awq_A415 Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f Leng 3e-04
1f4t_A368 Thermophilic P450: Cyp119 From Sulfolobus Solfactar 4e-04
1io8_A368 Thermophilic Cytochrome P450 (Cyp119) From Sulfolob 4e-04
2p85_A476 Structure Of Human Lung Cytochrome P450 2a13 With I 5e-04
3khm_A464 Crystal Structure Of Sterol 14alpha-Demethylase (Cy 6e-04
3k1o_A458 Crystal Structure Of Sterol 14-alpha Demethylase (c 7e-04
2wuz_A473 X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In 8e-04
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure 
Iteration: 1

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 13  PDSAP-TYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIPAGASIAIFIY 71
           P+ AP TYD + +++ L  V+ ET+RLFP A  + R    +V+     IP G  + I  Y
Sbjct: 318 PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSY 377
Query: 72  GLHRHPQLWNNPNQFDPDRFLPSQSSHRNP 101
            LHR P+ W  P +F P+RF      + +P
Sbjct: 378 ALHRDPKYWTEPEKFLPERFSKKNKDNIDP 407
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From Streptomyces Coelicolor Length = 467 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In Complex With Deoxycorticosterone Length = 483 Back     alignment and structure
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex With 22- Hydroxy-Cholesterol Length = 486 Back     alignment and structure
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin Length = 469 Back     alignment and structure
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane Monoxygenase 139-3 Length = 455 Back     alignment and structure
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3 Length = 487 Back     alignment and structure
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22- Dihydroxycholesterol Length = 471 Back     alignment and structure
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid Length = 458 Back     alignment and structure
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The Cytochrome P450(Bm-3) Length = 458 Back     alignment and structure
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain Of Cytochrome P450bm-3 Length = 455 Back     alignment and structure
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Length = 472 Back     alignment and structure
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso Length = 455 Back     alignment and structure
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Length = 461 Back     alignment and structure
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of P450bm- 3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A Prototype For Microsomal P450's Length = 471 Back     alignment and structure
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450 Length = 471 Back     alignment and structure
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin Length = 471 Back     alignment and structure
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine Inhibitor Bound To The Heme Domain Of Cytochrome P450-Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome P450- Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational Rearrangement Seen Upon Substrate-Binding In Wild-Type Enzyme Length = 471 Back     alignment and structure
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3 Length = 471 Back     alignment and structure
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain, A Ruthenium Modified P450 Bm3 Mutant Length = 470 Back     alignment and structure
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With Cholesterol Length = 487 Back     alignment and structure
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine Length = 470 Back     alignment and structure
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of P450bm-3 Length = 473 Back     alignment and structure
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase (C Complex With Ketoconazole Length = 461 Back     alignment and structure
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine Length = 472 Back     alignment and structure
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of P450bm-3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) Length = 472 Back     alignment and structure
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With Econazole Bound Length = 418 Back     alignment and structure
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 Length = 444 Back     alignment and structure
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 Length = 481 Back     alignment and structure
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3 Length = 479 Back     alignment and structure
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In Complex With Chaps Length = 482 Back     alignment and structure
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid Length = 417 Back     alignment and structure
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g Length = 415 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e Length = 407 Back     alignment and structure
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic Acid Length = 415 Back     alignment and structure
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e Length = 407 Back     alignment and structure
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With (R)-Ibuprophen Length = 407 Back     alignment and structure
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f Length = 415 Back     alignment and structure
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus With 4- Phenylimidazole Bound Length = 368 Back     alignment and structure
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus Solfataricus: High Resolution Structural Origin Of Its Thermostability And Functional Properties Length = 368 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Cruzi In Complex With Inhibitor Fluconazole Length = 464 Back     alignment and structure
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51) From Trypanosoma Cruzi In Complex With A Potential Antichagasic Drug, Posaconazole Length = 458 Back     alignment and structure
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex With Fluconazole In Alternative Conformation Length = 473 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query141
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 2e-40
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 7e-39
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 5e-38
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 3e-35
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 4e-35
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 1e-34
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 7e-34
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 2e-32
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 9e-31
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 1e-30
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 1e-30
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 8e-30
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 1e-27
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 2e-27
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 7e-26
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 2e-25
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 3e-25
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 2e-24
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 5e-21
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 8e-16
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 1e-15
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 1e-14
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 2e-14
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 3e-14
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 7e-14
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 5e-13
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 6e-13
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 7e-13
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 1e-12
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 1e-08
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 1e-08
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 2e-08
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 2e-08
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 2e-08
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 3e-08
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 4e-08
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 5e-08
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 6e-08
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 7e-08
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 3e-07
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 3e-07
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 6e-07
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 9e-07
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 9e-07
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 1e-06
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 2e-06
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 2e-06
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 2e-06
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 2e-06
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 3e-06
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 4e-06
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 4e-06
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 4e-06
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 4e-06
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 5e-06
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 5e-06
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 7e-06
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 8e-06
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 1e-05
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 1e-05
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 1e-05
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 1e-05
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 1e-05
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 1e-05
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 1e-05
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 2e-05
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 2e-05
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 2e-05
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 2e-05
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 4e-05
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 4e-05
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 7e-05
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 8e-05
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 1e-04
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 2e-04
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
 Score =  139 bits (353), Expect = 2e-40
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 2/99 (2%)

Query: 1   VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTI 60
           +  E+ +V+G        ++ L RL  L++V+KE++RL+P A    R    E       +
Sbjct: 280 LQAEVDEVIGS--KRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRV 337

Query: 61  PAGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHR 99
           P    +    Y + R    + +P  F+PDRF P     R
Sbjct: 338 PGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPR 376
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Length = 418 Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Length = 441 Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Length = 412 Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Length = 411 Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} PDB: 3ejd_B* 3eje_B* Length = 404 Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Length = 425 Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Length = 394 Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Length = 397 Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Length = 404 Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 381 Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Length = 408 Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Length = 414 Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Length = 436 Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Length = 368 Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Length = 419 Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Length = 367 Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Length = 398 Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Length = 411 Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Length = 396 Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A* 3be0_A* Length = 398 Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Length = 398 Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Length = 415 Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Length = 404 Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Length = 406 Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Length = 416 Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Length = 413 Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} Length = 417 Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} PDB: 3lxi_A* Length = 421 Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Length = 415 Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Length = 408 Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Length = 404 Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Length = 396 Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Length = 417 Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Length = 406 Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Length = 403 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Length = 412 Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Length = 411 Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Length = 417 Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Length = 411 Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Length = 435 Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Length = 433 Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Length = 343 Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Length = 450 Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Length = 426 Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Length = 428 Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} PDB: 3o1a_A* Length = 384 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query141
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.98
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.98
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.98
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 99.98
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.97
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.97
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.97
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.97
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.97
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.97
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.97
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.96
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 99.96
3v8d_A491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.96
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.94
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.94
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.93
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.93
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.93
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.93
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.93
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.93
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.93
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.93
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.93
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.93
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.93
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.93
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.92
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 99.92
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.92
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.92
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.92
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 99.92
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.92
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.92
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.92
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.92
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.92
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 99.92
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.92
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.92
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.92
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 99.92
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 99.92
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.92
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 99.92
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.92
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.92
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.92
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.92
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 99.92
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.91
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 99.91
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 99.91
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 99.91
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.91
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.9
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.9
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.9
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 99.88
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.86
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.82
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
Probab=100.00  E-value=5e-36  Score=228.69  Aligned_cols=124  Identities=23%  Similarity=0.464  Sum_probs=115.1

Q ss_pred             CHHHHHHHhCCCCCCCCCHHHhccCHHHHHHHHHhhcCCCCCCcc-eeecCceeeECCEEeCCCCEEEEcchhhhcCCCC
Q psy16716          1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVI-ARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL   79 (141)
Q Consensus         1 l~~Ei~~~l~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~r~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~   79 (141)
                      ||+||+++++.  +..++++++.+|||++|||+|+||++|+++.. .|.+.+|.+++||.|||||.|.++.+++|+|+++
T Consensus       309 l~~Ei~~~~~~--~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~  386 (479)
T 3tbg_A          309 VQQEIDDVIGQ--VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAV  386 (479)
T ss_dssp             HHHHHHHHTCS--SSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTT
T ss_pred             HHHHHHHHHhh--ccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhh
Confidence            57899999876  46789999999999999999999999999984 6677899999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCCCCCCCCCCCeeeecccCcccccceeeeccceeeeccCcccccccccc
Q psy16716         80 WNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTAKRSTYL  140 (141)
Q Consensus        80 w~~p~~f~P~Rfl~~~~~~~~~~~~~pfg~g~~~~~~~~c~~~~~~~~~~G~~~a~~e~~~  140 (141)
                      |+||++|+||||+++++...++.+|+|||.|     +|.|         +|++||.+|+.+
T Consensus       387 ~~dP~~F~PeRfl~~~~~~~~~~~~~pFG~G-----~R~C---------~G~~lA~~e~~~  433 (479)
T 3tbg_A          387 WEKPFRFHPEHFLDAQGHFVKPEAFLPFSAG-----RRAC---------LGEPLARMELFL  433 (479)
T ss_dssp             SSSTTSCCGGGGBCTTCCBCCCTTCCTTCCS-----TTSC---------TTHHHHHHHHHH
T ss_pred             CCCccccCccccCCCCcccCCCCceecCCCC-----CcCC---------hhHHHHHHHHHH
Confidence            9999999999999888877788999999999     8999         999999999864
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 141
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 4e-18
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 1e-15
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 4e-14
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 8e-09
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 4e-08
d1cpta_428 a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas s 5e-08
d1izoa_411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 2e-06
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 4e-06
d1jfba_399 a.104.1.1 (A:) Cytochrome P450-NOR, nitric reducta 9e-05
d1z8oa1402 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharo 2e-04
d1s1fa_399 a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [ 2e-04
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 3e-04
d1lfka_394 a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatops 0.001
d1ueda_403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 0.001
d1q5da_401 a.104.1.1 (A:) Cytochrome P450epok {Sorangium cell 0.002
d1gwia_403 a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyce 0.004
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (188), Expect = 4e-18
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 2   YHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPVIARSAPYEVQCGDYTIP 61
             E+  VL +     PTYD + +++ L  V+ ET+RLFP A  + R    +V+     IP
Sbjct: 305 QEEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIP 362

Query: 62  AGASIAIFIYGLHRHPQLWNNPNQFDPDRFLPSQSSHRNPSAM 104
            G  + I  Y LHR P+ W  P +F P+RF      + +P   
Sbjct: 363 KGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIY 405
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Length = 428 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Length = 399 Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Length = 402 Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Length = 399 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Length = 394 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Length = 401 Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 403 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query141
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 100.0
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.98
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.98
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.97
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.95
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.95
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.91
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.9
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.9
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.89
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.89
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.88
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.86
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.85
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.85
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.84
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.84
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.84
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.84
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.81
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Vitamin D 25-hydroxylase Cyp2R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-34  Score=214.50  Aligned_cols=124  Identities=24%  Similarity=0.528  Sum_probs=114.7

Q ss_pred             CHHHHHHHhCCCCCCCCCHHHhccCHHHHHHHHHhhcCCCCCCc-ceeecCceeeECCEEeCCCCEEEEcchhhhcCCCC
Q psy16716          1 VYHELQDVLGDSPDSAPTYDQLQRLDLLTRVIKETMRLFPAAPV-IARSAPYEVQCGDYTIPAGASIAIFIYGLHRHPQL   79 (141)
Q Consensus         1 l~~Ei~~~l~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~-~~r~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~   79 (141)
                      |++||+.+++.  .+.++++++.+|||++|+++|++|++|+++. +.|.+.+|..++|+.||||+.|.++.+++|+|+++
T Consensus       297 l~~Ei~~~~~~--~~~~~~~~l~~lp~l~a~~~Et~Rl~~~~~~~~~r~~~~~~~~~g~~ipkG~~v~~~~~~~~~d~~~  374 (463)
T d3czha1         297 VQKEIDLIMGP--NGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKY  374 (463)
T ss_dssp             HHHHHHHHTCS--SSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTT
T ss_pred             HHHHHHhhcCC--CCCCCHHHHHhhhhcccccceeeeeeccccccceecccCCcccCCcEECCCCcccCcHHHhhCCccc
Confidence            47899999876  4678999999999999999999999999987 68999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCCCCCCCCCCCeeeecccCcccccceeeeccceeeeccCcccccccccc
Q psy16716         80 WNNPNQFDPDRFLPSQSSHRNPSAMSVIVTLDALRLRTICNMRASIAIFSGQNTAKRSTYL  140 (141)
Q Consensus        80 w~~p~~f~P~Rfl~~~~~~~~~~~~~pfg~g~~~~~~~~c~~~~~~~~~~G~~~a~~e~~~  140 (141)
                      |+||++|+||||++++....++.+|+|||.|     +|.|         +|+++|.+|+.+
T Consensus       375 ~~dp~~F~PeRfl~~~~~~~~~~~~~~FG~G-----~r~C---------~G~~~A~~~~~~  421 (463)
T d3czha1         375 WRDPEVFHPERFLDSSGYFAKKEALVPFSLG-----RRHC---------LGEHLARMEMFL  421 (463)
T ss_dssp             CSSTTSCCGGGGBCTTSCBCCCTTCCTTCCS-----TTCC---------TTHHHHHHHHHH
T ss_pred             CCChhhcCccccCCCccccCCCCceeCCCCC-----CcCC---------chHHHHHHHHHH
Confidence            9999999999999888777788899999999     8999         999999999754
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure