Psyllid ID: psy16754


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
MFRLVGEESFQLDSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFSQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKLKTN
ccccccEEEEEEccEEEEEEEEEcccccEEEEEEEEccEEHHHHHccEEEEEEEEEEccEEEEEEEEcccEEEEEccEEEEEEEEEEEccEEEEEEEccccEEEEEEEEcccEEEEEEEEHHHcccc
cccEcccEEEEEcccEEEEEEEEccccEEEEEEEEEccccHHHEccccEEEEEEEEEcccEEEEEEEcccEEEEEccEEEEEccEEcccccEEEEEEcccEEEEEEEEccccccEEEEEEEEccccc
mfrlvgeesfqldskvpclikiepsgpfgyaysitVDGKTLEKFSQSKANCTWIVTVEDETYRVVLERgtldiwvngdrvdvtgefvengtethftigdtPAYIKAVSSCNKKEGLLYSLISKLKTN
mfrlvgeesfqldskvpCLIKIEPSGPFGYAYSITVDGKTLEKFSqskanctwivtvedetyRVVLErgtldiwvngdrVDVTGEFVengtethftigdtpAYIKAVSSCNKKEGLLYSLISKLKTN
MFRLVGEESFQLDSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFSQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKLKTN
**********QLDSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFSQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLI******
MFRLVGEESFQLDSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFSQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKLK**
**********QLDSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFSQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKLKTN
MFRLVGEESFQLDSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFSQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKL***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFRLVGEESFQLDSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFSQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKLKTN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query127 2.2.26 [Sep-21-2011]
Q0IIF6201 Fas apoptotic inhibitory yes N/A 0.952 0.601 0.467 7e-28
Q9WUD8179 Fas apoptotic inhibitory yes N/A 0.952 0.675 0.451 1e-27
Q8R5H8201 Fas apoptotic inhibitory no N/A 0.952 0.601 0.451 1e-27
Q9NVQ4179 Fas apoptotic inhibitory yes N/A 0.952 0.675 0.435 3e-27
>sp|Q0IIF6|FAIM1_BOVIN Fas apoptotic inhibitory molecule 1 OS=Bos taurus GN=FAIM PE=2 SV=1 Back     alignment and function desciption
 Score =  122 bits (306), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 90/124 (72%), Gaps = 3/124 (2%)

Query: 1   MFRLVGEESFQLDS-KVPCLIKIEPSGPFGYAYSITVDGKTLEKF--SQSKANCTWIVTV 57
           MF+LVG+E+F + + K    I I+    F Y Y++ ++GK+L+K+  ++SK   TW++ +
Sbjct: 67  MFKLVGKETFCVGAAKTKATINIDAVSGFAYEYTLEINGKSLKKYMENRSKTTNTWVLHL 126

Query: 58  EDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLL 117
           + E +RVVLE+ TLD+W NG +++  GEFV++GTETHF IG+   YIKAVSS  +KEG++
Sbjct: 127 DSEDFRVVLEKDTLDVWCNGKKMETAGEFVDDGTETHFNIGNHDCYIKAVSSGKRKEGII 186

Query: 118 YSLI 121
           +SLI
Sbjct: 187 HSLI 190




Plays a role as an inducible effector molecule that mediates Fas resistance produced by surface Ig engagement in B cells.
Bos taurus (taxid: 9913)
>sp|Q9WUD8|FAIM1_MOUSE Fas apoptotic inhibitory molecule 1 OS=Mus musculus GN=Faim PE=1 SV=1 Back     alignment and function description
>sp|Q8R5H8|FAIM1_RAT Fas apoptotic inhibitory molecule 1 OS=Rattus norvegicus GN=Faim PE=2 SV=1 Back     alignment and function description
>sp|Q9NVQ4|FAIM1_HUMAN Fas apoptotic inhibitory molecule 1 OS=Homo sapiens GN=FAIM PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query127
242010688178 Fas apoptotic inhibitory molecule, putat 0.944 0.674 0.552 4e-31
443700137186 hypothetical protein CAPTEDRAFT_152651 [ 0.937 0.639 0.540 1e-27
260836075178 hypothetical protein BRAFLDRAFT_59106 [B 0.952 0.679 0.487 3e-27
426218230201 PREDICTED: fas apoptotic inhibitory mole 0.952 0.601 0.475 5e-27
345789254179 PREDICTED: fas apoptotic inhibitory mole 0.952 0.675 0.467 9e-27
326923045221 PREDICTED: fas apoptotic inhibitory mole 0.952 0.547 0.467 1e-26
50750730 243 PREDICTED: fas apoptotic inhibitory mole 0.952 0.497 0.467 1e-26
73990624201 PREDICTED: fas apoptotic inhibitory mole 0.952 0.601 0.467 2e-26
350536413200 fas apoptotic inhibitory molecule 1 [Sus 0.952 0.605 0.459 3e-26
410971302179 PREDICTED: fas apoptotic inhibitory mole 0.952 0.675 0.459 3e-26
>gi|242010688|ref|XP_002426092.1| Fas apoptotic inhibitory molecule, putative [Pediculus humanus corporis] gi|212510125|gb|EEB13354.1| Fas apoptotic inhibitory molecule, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/123 (55%), Positives = 90/123 (73%), Gaps = 3/123 (2%)

Query: 1   MFRLVGEESFQLDSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFS--QSKANCTWIVTVE 58
           MF+LVG E F +     C+I+I+P G F Y+Y++ V+GK    F+  QSKA  TWIV   
Sbjct: 46  MFKLVGCEYFTV-GNAKCIIRIDPVGGFSYSYTLMVNGKNFNTFAEIQSKALKTWIVHFN 104

Query: 59  DETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLY 118
           D+TYRVVLE+G LDIW NG ++DV  EFVE+GTETHFT+G  PA IKAV+S N++EG+++
Sbjct: 105 DDTYRVVLEKGNLDIWANGVKLDVASEFVEDGTETHFTLGQWPACIKAVTSGNRREGIIH 164

Query: 119 SLI 121
            LI
Sbjct: 165 HLI 167




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443700137|gb|ELT99248.1| hypothetical protein CAPTEDRAFT_152651 [Capitella teleta] Back     alignment and taxonomy information
>gi|260836075|ref|XP_002613032.1| hypothetical protein BRAFLDRAFT_59106 [Branchiostoma floridae] gi|229298415|gb|EEN69041.1| hypothetical protein BRAFLDRAFT_59106 [Branchiostoma floridae] Back     alignment and taxonomy information
>gi|426218230|ref|XP_004003352.1| PREDICTED: fas apoptotic inhibitory molecule 1 [Ovis aries] Back     alignment and taxonomy information
>gi|345789254|ref|XP_003433198.1| PREDICTED: fas apoptotic inhibitory molecule 1 isoform 1 [Canis lupus familiaris] Back     alignment and taxonomy information
>gi|326923045|ref|XP_003207752.1| PREDICTED: fas apoptotic inhibitory molecule 1-like [Meleagris gallopavo] Back     alignment and taxonomy information
>gi|50750730|ref|XP_422117.1| PREDICTED: fas apoptotic inhibitory molecule 1 [Gallus gallus] Back     alignment and taxonomy information
>gi|73990624|ref|XP_542807.2| PREDICTED: fas apoptotic inhibitory molecule 1 isoform 2 [Canis lupus familiaris] Back     alignment and taxonomy information
>gi|350536413|ref|NP_001232905.1| fas apoptotic inhibitory molecule 1 [Sus scrofa] gi|326375383|gb|ADZ57166.1| Fas apoptosis inhibitory molecule 1 [Sus scrofa] Back     alignment and taxonomy information
>gi|410971302|ref|XP_003992109.1| PREDICTED: fas apoptotic inhibitory molecule 1 isoform 2 [Felis catus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query127
UNIPROTKB|F1NFB2180 FAIM "Uncharacterized protein" 0.952 0.672 0.467 1.9e-28
UNIPROTKB|E2R728201 FAIM "Uncharacterized protein" 0.952 0.601 0.467 3.9e-28
UNIPROTKB|I3LQI5200 FAIM "Uncharacterized protein" 0.952 0.605 0.459 6.4e-28
UNIPROTKB|Q0IIF6201 FAIM "Fas apoptotic inhibitory 0.952 0.601 0.467 8.2e-28
MGI|MGI:1344387179 Faim "Fas apoptotic inhibitory 0.952 0.675 0.451 1.3e-27
RGD|620572201 Faim "Fas apoptotic inhibitory 0.952 0.601 0.451 2.2e-27
UNIPROTKB|Q9NVQ4179 FAIM "Fas apoptotic inhibitory 0.952 0.675 0.435 7.3e-27
ZFIN|ZDB-GENE-040718-91180 faimb "Fas apoptotic inhibitor 0.952 0.672 0.419 2.2e-25
ZFIN|ZDB-GENE-040718-323179 faima "Fas apoptotic inhibitor 0.952 0.675 0.427 3.6e-25
WB|WBGene00016633190 C44B11.1 [Caenorhabditis elega 0.937 0.626 0.442 1.6e-24
UNIPROTKB|F1NFB2 FAIM "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 58/124 (46%), Positives = 91/124 (73%)

Query:     1 MFRLVGEESFQLD-SKVPCLIKIEPSGPFGYAYSITVDGKTLEKF--SQSKANCTWIVTV 57
             MF+LVG+E+F +  SK    I I+    F Y Y++ ++GK+L+K+  ++SK   TW++++
Sbjct:    46 MFKLVGKETFTVGVSKTRATINIDAVSGFAYEYTLEINGKSLKKYMENRSKTTNTWVLSL 105

Query:    58 EDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLL 117
                 YRVVLE+ T+D+W NG++++  GEFVE+GTETHF++GD   YIKAVSS  +KEG++
Sbjct:   106 GGTDYRVVLEKDTMDVWCNGEKMETAGEFVEDGTETHFSVGDHSCYIKAVSSGKRKEGII 165

Query:   118 YSLI 121
             ++LI
Sbjct:   166 HTLI 169




GO:0043066 "negative regulation of apoptotic process" evidence=IEA
UNIPROTKB|E2R728 FAIM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LQI5 FAIM "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q0IIF6 FAIM "Fas apoptotic inhibitory molecule 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1344387 Faim "Fas apoptotic inhibitory molecule" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|620572 Faim "Fas apoptotic inhibitory molecule" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NVQ4 FAIM "Fas apoptotic inhibitory molecule 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-91 faimb "Fas apoptotic inhibitory molecule b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-323 faima "Fas apoptotic inhibitory molecule a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00016633 C44B11.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9NVQ4FAIM1_HUMANNo assigned EC number0.43540.95270.6759yesN/A
Q9WUD8FAIM1_MOUSENo assigned EC number0.45160.95270.6759yesN/A
Q0IIF6FAIM1_BOVINNo assigned EC number0.46770.95270.6019yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query127
pfam06905178 pfam06905, FAIM1, Fas apoptotic inhibitory molecul 9e-44
>gnl|CDD|219225 pfam06905, FAIM1, Fas apoptotic inhibitory molecule (FAIM1) Back     alignment and domain information
 Score =  141 bits (356), Expect = 9e-44
 Identities = 57/124 (45%), Positives = 93/124 (75%), Gaps = 3/124 (2%)

Query: 1   MFRLVGEESFQLDS-KVPCLIKIEPSGPFGYAYSITVDGKTLEKF--SQSKANCTWIVTV 57
           MF+LVG+E+F + + +    I IE    F Y Y++ +DGK+L+KF  ++SK   TW++ +
Sbjct: 46  MFKLVGKETFPVGASQTKATINIEAISGFAYEYTLEIDGKSLKKFTENRSKTTRTWLLKL 105

Query: 58  EDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLL 117
           + + YRVVLE+ T+D+WVNG++++  GEFV++GTETHF++GD   YIKA+SS NK+ G++
Sbjct: 106 DGQDYRVVLEKDTMDVWVNGEKMETAGEFVDDGTETHFSLGDHECYIKALSSGNKRNGIV 165

Query: 118 YSLI 121
           ++L+
Sbjct: 166 HTLL 169


This family consists of several fas apoptotic inhibitory molecule (FAIM1) proteins. FAIM expression is upregulated in B cells by anti-Ig treatment that induces Fas-resistance, and overexpression of FAIM diminishes sensitivity to Fas-mediated apoptosis of B and non-B cell lines. FAIM1 is highly evolutionarily conserved and is widely expressed in murine tissues, suggesting that FAIM plays an important role in cellular physiology. Length = 178

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 127
KOG4352|consensus187 100.0
PF06905177 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); 100.0
PF06905177 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); 97.73
KOG4352|consensus 187 97.25
COG3443193 Predicted periplasmic or secreted protein [General 87.19
>KOG4352|consensus Back     alignment and domain information
Probab=100.00  E-value=1.9e-61  Score=372.68  Aligned_cols=123  Identities=40%  Similarity=0.826  Sum_probs=121.9

Q ss_pred             CccccceeeEEe-CCcceEEEEEEccCCceEEEEEEECCeehHhhh--eeeeeeeeEEeeCCeeEEEEEEccceeEEEcC
Q psy16754          1 MFRLVGEESFQL-DSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFS--QSKANCTWIVTVEDETYRVVLERGTLDIWVNG   77 (127)
Q Consensus         1 mFkLVGke~F~i-~~~~k~~I~I~a~~gf~YeYsL~V~GKsl~kf~--~~k~~~tW~~~i~g~~~RIvLdK~tmdvw~nG   77 (127)
                      ||||||||+|.| +  +||+|+|||+|||+|||||+|||||++||+  ++|++++|+.+.||++|||||+|++|+|||||
T Consensus        45 MFKLVGketF~vg~--tkciInvda~~gFaYEYsL~inGKs~~ky~Ed~~k~~~~W~~t~dg~~~RivL~kdtm~~w~NG  122 (187)
T KOG4352|consen   45 MFKLVGKETFHVGQ--TKCIINVDAAPGFAYEYSLYINGKSHDKYTEDMTKQYRLWLYTDDGQEYRIVLKKDTMSLWVNG  122 (187)
T ss_pred             HHHhhchheEeecc--eEEEEEeccCCCceEEEEEEEcCcchHHHHHHhhhheeEEEEecCCceEEEEEeccceeeEEcC
Confidence            899999999999 7  899999999999999999999999999999  99999999999999999999999999999999


Q ss_pred             EEeceeeeeeeCCeeEEEEeCCccEEEEEEeecCceeceEEEEEecCc
Q psy16754         78 DRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKLK  125 (127)
Q Consensus        78 ~~iet~geFvd~Gtet~F~lg~~~c~I~a~ssG~k~~Gi~H~L~vn~~  125 (127)
                      .+++|+|||||+||+|||+||+++|+|+|+|||+|++||+|+|+|||+
T Consensus       123 ~~l~TageFVd~GT~ThF~lg~~~c~i~A~SSGkkk~GivHTL~vng~  170 (187)
T KOG4352|consen  123 DELRTAGEFVDGGTDTHFLLGDTECVIQARSSGKKKDGIVHTLLVNGV  170 (187)
T ss_pred             ccccccceeecCCeeEEEEecCCcEEEEEeccCCCcCcEEEEEEECCE
Confidence            999999999999999999999999999999999999999999999996



>PF06905 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); InterPro: IPR010695 This family consists of several fas apoptotic inhibitory molecule (FAIM) proteins Back     alignment and domain information
>PF06905 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); InterPro: IPR010695 This family consists of several fas apoptotic inhibitory molecule (FAIM) proteins Back     alignment and domain information
>KOG4352|consensus Back     alignment and domain information
>COG3443 Predicted periplasmic or secreted protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query127
2kd2_A94 Nmr Structure Of Faim-Ctd Length = 94 1e-19
2kw1_A89 Solution Structure Of Ctd Length = 89 2e-19
3mx7_A90 Crystal Structure Analysis Of Human Faim-Ntd Length 7e-04
>pdb|2KD2|A Chain A, Nmr Structure Of Faim-Ctd Length = 94 Back     alignment and structure

Iteration: 1

Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 60/77 (77%) Query: 45 SQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYI 104 ++SK TW++ ++ E RVVLE+ T+D+W NG +++ GEFV++GTETHF++G+ YI Sbjct: 7 NRSKTTSTWVLRLDGEDLRVVLEKDTMDVWCNGQKMETAGEFVDDGTETHFSVGNHDCYI 66 Query: 105 KAVSSCNKKEGLLYSLI 121 KAVSS +KEG++++LI Sbjct: 67 KAVSSGKRKEGIIHTLI 83
>pdb|2KW1|A Chain A, Solution Structure Of Ctd Length = 89 Back     alignment and structure
>pdb|3MX7|A Chain A, Crystal Structure Analysis Of Human Faim-Ntd Length = 90 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query127
2kd2_A94 FAS apoptotic inhibitory molecule 1; protein, beta 5e-30
3mx7_A90 FAS apoptotic inhibitory molecule 1; beta sheet, a 5e-13
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A Length = 94 Back     alignment and structure
 Score =  102 bits (256), Expect = 5e-30
 Identities = 38/77 (49%), Positives = 60/77 (77%)

Query: 45  SQSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYI 104
           ++SK   TW++ ++ E  RVVLE+ T+D+W NG +++  GEFV++GTETHF++G+   YI
Sbjct: 7   NRSKTTSTWVLRLDGEDLRVVLEKDTMDVWCNGQKMETAGEFVDDGTETHFSVGNHDCYI 66

Query: 105 KAVSSCNKKEGLLYSLI 121
           KAVSS  +KEG++++LI
Sbjct: 67  KAVSSGKRKEGIIHTLI 83


>3mx7_A FAS apoptotic inhibitory molecule 1; beta sheet, apoptosis; 1.76A {Homo sapiens} Length = 90 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query127
2kd2_A94 FAS apoptotic inhibitory molecule 1; protein, beta 100.0
3mx7_A90 FAS apoptotic inhibitory molecule 1; beta sheet, a 99.8
3mx7_A90 FAS apoptotic inhibitory molecule 1; beta sheet, a 98.26
4ffh_A492 Levan fructotransferase; glycoside hydrolase; HET: 81.55
3kf3_A509 Invertase; GH32, glycoprotein, glycosidase, hydrol 80.15
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A Back     alignment and structure
Probab=100.00  E-value=4e-44  Score=254.47  Aligned_cols=81  Identities=47%  Similarity=0.923  Sum_probs=79.9

Q ss_pred             eeeeeeeeEEeeCCeeEEEEEEccceeEEEcCEEeceeeeeeeCCeeEEEEeCCccEEEEEEeecCceeceEEEEEecCc
Q psy16754         46 QSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKLK  125 (127)
Q Consensus        46 ~~k~~~tW~~~i~g~~~RIvLdK~tmdvw~nG~~iet~geFvd~Gtet~F~lg~~~c~I~a~ssG~k~~Gi~H~L~vn~~  125 (127)
                      |+|+++||+++++|++|||||||+||||||||++||++|||||+||+|||+++++||+|+|+|||+|++||+|+|||||+
T Consensus         8 ~~k~~~tW~~~~~G~~~RIvLeK~tmdVwvNG~~iet~geFvd~GTet~F~lg~~~c~I~a~sSG~k~~GIiH~L~Vng~   87 (94)
T 2kd2_A            8 RSKTTSTWVLRLDGEDLRVVLEKDTMDVWCNGQKMETAGEFVDDGTETHFSVGNHDCYIKAVSSGKRKEGIIHTLIVDNR   87 (94)
T ss_dssp             CCTTEEEEEEEETTEEEEEEEETTTTEEEESSSBCCCCCEECSSSEEEEEEETTEEEEEEEEEESSSSSEEEEEEEESSC
T ss_pred             hhhheeEEEEEeCCCEEEEEEecCcEEEEECCEEeEEeeEEecCCcEEEEEeCCceEEEEEEecCCCcccEEEEEEECCe
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             C
Q psy16754        126 T  126 (127)
Q Consensus       126 ~  126 (127)
                      .
T Consensus        88 ~   88 (94)
T 2kd2_A           88 E   88 (94)
T ss_dssp             B
T ss_pred             E
Confidence            4



>3mx7_A FAS apoptotic inhibitory molecule 1; beta sheet, apoptosis; 1.76A {Homo sapiens} Back     alignment and structure
>3mx7_A FAS apoptotic inhibitory molecule 1; beta sheet, apoptosis; 1.76A {Homo sapiens} Back     alignment and structure
>4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Back     alignment and structure
>3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query127
d1y4wa1164 Exo-inulinase {Aspergillus awamori [TaxId: 105351] 84.92
d1uypa1138 Beta-fructosidase (invertase), C-terminal domain { 80.84
>d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 32 C-terminal domain
domain: Exo-inulinase
species: Aspergillus awamori [TaxId: 105351]
Probab=84.92  E-value=1.2  Score=30.76  Aligned_cols=32  Identities=6%  Similarity=0.231  Sum_probs=27.5

Q ss_pred             eEEEEEEccceeEEEcC-EEeceeeeeeeCCee
Q psy16754         61 TYRVVLERGTLDIWVNG-DRVDVTGEFVENGTE   92 (127)
Q Consensus        61 ~~RIvLdK~tmdvw~nG-~~iet~geFvd~Gte   92 (127)
                      ..||.+|+..+||++|+ +..=|.+-|.+.+..
T Consensus       107 ~Lri~vD~ssvEvF~NdG~~~~T~~~fp~~~~~  139 (164)
T d1y4wa1         107 KLSIFVDRSSVEVFGGQGETTLTAQIFPSSDAV  139 (164)
T ss_dssp             EEEEEEETTEEEEEETTTTEEEEEECCCCTTCC
T ss_pred             EEEEEEECcEEEEEECCCeEEEEEEecCCCCCC
Confidence            89999999999999995 888888888775544



>d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure