Psyllid ID: psy16773

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
Protein Sequence
MFSVLSNLPSKFTVKSAFLVSILTWSFNGNRSLTLVRTICHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEMYSLWRVALTATFTSGPKR
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEEEEEEEEEEcccEEEEEHHHHHccccEEEcccccccccccccccEEEEEEcccHHHHHHHHHHHcccEEEEEEEEccccccccHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccccEEHHHHHHHHHEEcccccccEEEEEEEccccEEEEEccccccHHHHHcccEEEEEcccHHHHHHHHHHHHcccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mfsvlsnlpskftvKSAFLVSILTWsfngnrslTLVRTIchptgivfrrsgskssqihkcdlRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEMYSLWRVALTAtftsgpkr
Flexible Loop (DISEMBL)
mfsvlsnlpskftVKSAFLVSILTWSFNGNRSLTLVRTICHPTGIVFrrsgskssqihKCDLRVAVIGQSSFAAEVYKLLkknghsvvGVFTVVDKANREDIVDEMYSLWRVALtatftsgpkr
Low Complexity Region (SEG)
MFSVLSNLPSKFTVKSAFLVSILTWSFNGNRSLTLVRTICHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEMYSLWRVALTATFTSGPKR
Disordered region (IsUnstruct)
*********SKFTVKSAFLVSILTWSFNGNRSLTLVRTICHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEMYSLWRVALTATF******
Disordered Region (DISOPRED)
**S****LPSKFTVKSAFLVSILTWSFNGNRSLTLVRTICHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEMYSLWRVALTAT*******
Disordered Region (DISEMBL)
MFSVLSNLPSKFTVKSAFLVSILTWSFNGNRSLTLVRTICHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEMYSLWRVALTATFTSGPKR
Disordered Region (DISPRO)
*FSVLSNLPSKFTVKSAFLVSILTWSFNGNRSLTLVRTICHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEMYSLWRVALTATFTS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFSVLSNLPSKFTVKSAFLVSILTWSFNGNRSLTLVRTICHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEMYSLWRVALTATFTSGPKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	124	2.2.26 [Sep-21-2011]
Q3SY69	923	Mitochondrial 10-formylte	yes	N/A	0.346	0.046	0.581	9e-07
O75891	902	Cytosolic 10-formyltetrah	no	N/A	0.322	0.044	0.6	1e-06
Q8K009	923	Mitochondrial 10-formylte	yes	N/A	0.427	0.057	0.528	1e-06
P28037	902	Cytosolic 10-formyltetrah	yes	N/A	0.322	0.044	0.575	1e-06
Q8R0Y6	902	Cytosolic 10-formyltetrah	no	N/A	0.322	0.044	0.575	1e-06
Q63ZT8	902	Cytosolic 10-formyltetrah	no	N/A	0.322	0.044	0.575	1e-06
Q6GNL7	902	Cytosolic 10-formyltetrah	N/A	N/A	0.322	0.044	0.575	1e-06
Q5RFM9	902	Cytosolic 10-formyltetrah	no	N/A	0.322	0.044	0.575	8e-06

>sp|Q3SY69|AL1L2_HUMAN Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 30/43 (69%)

Query: 59  KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           K  L++A+IGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct: 20  KNKLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDGKAD 62

Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 5EC: .EC: 1EC: .EC: 6

>sp|O75891|AL1L1_HUMAN Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct: 1   MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q8K009|AL1L2_MOUSE Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l2 PE=2 SV=2

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/53 (52%), Positives = 32/53 (60%)

Query: 49  RSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           R  S S    K  L++A+IGQS F  EVY  L K GH VVGVFTV DK  + D
Sbjct: 10  RHFSTSRVYFKNKLKLALIGQSLFGQEVYSQLLKEGHRVVGVFTVPDKDGKAD 62

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|P28037|AL1L1_RAT Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=3

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           +++AVIGQS F  EVY  L+K GH VVGVFT+ DK  + D
Sbjct: 1   MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDGKAD 40

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q8R0Y6|AL1L1_MOUSE Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           +++AVIGQS F  EVY  L+K GH VVGVFT+ DK  + D
Sbjct: 1   MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDGKAD 40

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q63ZT8|AL1L1_XENTR Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           +++AVIGQS F  EVY+ L K GH VVGVFT+ DK  + D
Sbjct: 1   MKIAVIGQSLFGREVYRELLKEGHQVVGVFTIPDKNGKAD 40

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q6GNL7|AL1L1_XENLA Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           +++AVIGQS F  EVY+ L K GH VVGVFT+ DK  + D
Sbjct: 1   MKIAVIGQSLFGREVYRELLKEGHQVVGVFTIPDKNGKAD 40

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q5RFM9|AL1L1_PONAB Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 28/40 (70%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           +++AVIGQS F  EVY  L+K GH VVG FTV DK  + D
Sbjct: 1   MKIAVIGQSLFGQEVYCHLRKEGHEVVGGFTVPDKDGKAD 40

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
350411270	900	PREDICTED: aldehyde dehydrogenase family	0.322	0.044	0.8	2e-11
357631685	927	putative aldehyde dehydrogenase [Danaus	0.435	0.058	0.562	2e-11
350411273	919	PREDICTED: aldehyde dehydrogenase family	0.322	0.043	0.8	2e-11
328713300	922	PREDICTED: 10-formyltetrahydrofolate deh	0.427	0.057	0.641	4e-11
340729606	919	PREDICTED: aldehyde dehydrogenase family	0.322	0.043	0.775	7e-11
340729604	902	PREDICTED: aldehyde dehydrogenase family	0.322	0.044	0.775	7e-11
383859222	919	PREDICTED: cytosolic 10-formyltetrahydro	0.322	0.043	0.75	2e-10
307199185	490	10-formyltetrahydrofolate dehydrogenase	0.322	0.081	0.775	2e-10
322801064	920	hypothetical protein SINV_03911 [Solenop	0.322	0.043	0.75	3e-10
332029989	899	10-formyltetrahydrofolate dehydrogenase	0.322	0.044	0.75	3e-10

>gi|350411270|ref|XP_003489293.1| PREDICTED: aldehyde dehydrogenase family 1 member L1-like isoform 1 [Bombus impatiens]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/40 (80%), Positives = 37/40 (92%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           L+VA+IGQSSFAAEVYKLLK+NGH + GVFT+ DKANRED
Sbjct: 4   LKVAIIGQSSFAAEVYKLLKQNGHQITGVFTIPDKANRED 43

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357631685|gb|EHJ79154.1| putative aldehyde dehydrogenase [Danaus plexippus]

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 10/64 (15%)

Query: 59  KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEM----------YS 108
           K  LRVA+IGQS+FAAEV+KLL+++GH VVGVFTV+DK NRED +  +          Y 
Sbjct: 12  KKKLRVAIIGQSTFAAEVFKLLQRDGHEVVGVFTVLDKGNREDPLATIAAQNGKPVFKYK 71

Query: 109 LWRV 112
            WRV
Sbjct: 72  TWRV 75

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411273|ref|XP_003489294.1| PREDICTED: aldehyde dehydrogenase family 1 member L1-like isoform 2 [Bombus impatiens]

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/40 (80%), Positives = 37/40 (92%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           L+VA+IGQSSFAAEVYKLLK+NGH + GVFT+ DKANRED
Sbjct: 23  LKVAIIGQSSFAAEVYKLLKQNGHQITGVFTIPDKANRED 62

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713300|ref|XP_001951227.2| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like [Acyrthosiphon pisum]

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 42/53 (79%)

Query: 49  RSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           R  S+    ++ DL VA+IGQS+FAAEVYKLL KNGH VVGVFT++DK NR+D
Sbjct: 11  RPTSRFGLTYQRDLNVAIIGQSTFAAEVYKLLLKNGHRVVGVFTILDKGNRQD 63

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729606|ref|XP_003403089.1| PREDICTED: aldehyde dehydrogenase family 1 member L1-like isoform 2 [Bombus terrestris]

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           L+VA+IGQS FAAEVYKLLK+NGH + GVFT+ DKANRED
Sbjct: 23  LKVAIIGQSPFAAEVYKLLKQNGHQITGVFTIPDKANRED 62

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729604|ref|XP_003403088.1| PREDICTED: aldehyde dehydrogenase family 1 member L1-like isoform 1 [Bombus terrestris]

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           L+VA+IGQS FAAEVYKLLK+NGH + GVFT+ DKANRED
Sbjct: 6   LKVAIIGQSPFAAEVYKLLKQNGHQITGVFTIPDKANRED 45

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859222|ref|XP_003705095.1| PREDICTED: cytosolic 10-formyltetrahydrofolate dehydrogenase-like [Megachile rotundata]

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 35/40 (87%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           L+VA+IGQS FAAEVYKLLK+NGH + GVFT+ DK NRED
Sbjct: 23  LKVAIIGQSPFAAEVYKLLKQNGHQITGVFTIPDKGNRED 62

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199185|gb|EFN79872.1| 10-formyltetrahydrofolate dehydrogenase [Harpegnathos saltator]

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/40 (77%), Positives = 35/40 (87%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           L+VA+IGQS FAAEVYKLL+KNGH V GVFT+ DK NRED
Sbjct: 4   LKVAIIGQSPFAAEVYKLLRKNGHRVTGVFTIPDKGNRED 43

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322801064|gb|EFZ21820.1| hypothetical protein SINV_03911 [Solenopsis invicta]

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/40 (75%), Positives = 35/40 (87%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           L+VA+IGQS FAAEVYKLL++NGH V GVFT+ DK NRED
Sbjct: 4   LKVAIIGQSPFAAEVYKLLRQNGHQVTGVFTIPDKGNRED 43

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029989|gb|EGI69814.1| 10-formyltetrahydrofolate dehydrogenase [Acromyrmex echinatior]

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/40 (75%), Positives = 35/40 (87%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           L+VA+IGQS FAAEVYKLL++NGH V GVFT+ DK NRED
Sbjct: 4   LKVAIIGQSPFAAEVYKLLRQNGHQVTGVFTIPDKGNRED 43

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	124
UNIPROTKB|F2Z324	47	ALDH1L1 "Cytosolic 10-formylte	0.346	0.914	0.581	6.8e-08
WB|WBGene00000109	908	alh-3 [Caenorhabditis elegans	0.338	0.046	0.547	1e-07
UNIPROTKB|C9IZ36	177	ALDH1L1 "Cytosolic 10-formylte	0.322	0.225	0.6	1.8e-07
UNIPROTKB|C9JY00	157	ALDH1L1 "Cytosolic 10-formylte	0.322	0.254	0.6	1.8e-07
UNIPROTKB|C9JYZ6	168	ALDH1L1 "Cytosolic 10-formylte	0.322	0.238	0.6	1.8e-07
UNIPROTKB|D6RFJ7	100	ALDH1L1 "Cytosolic 10-formylte	0.322	0.4	0.6	1.8e-07
UNIPROTKB|F8WC34	81	ALDH1L1 "Cytosolic 10-formylte	0.322	0.493	0.6	1.8e-07
UNIPROTKB|F6UL10	359	ALDH1L1 "Uncharacterized prote	0.322	0.111	0.6	1.1e-06
UNIPROTKB|E2QSR7	505	ALDH1L1 "Uncharacterized prote	0.322	0.079	0.6	1.9e-06
UNIPROTKB|Q8TBP8	505	ALDH1L1 "Aldehyde dehydrogenas	0.322	0.079	0.6	1.9e-06

UNIPROTKB|F2Z324 ALDH1L1 "Cytosolic 10-formyltetrahydrofolate dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVD 104
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D +D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLD 43

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

WB|WBGene00000109 alh-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 134 (52.2 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 23/42 (54%), Positives = 34/42 (80%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIV 103
             +++A+IGQS+F  +VYK L+KNGH +V VFT+ DK  RED++
Sbjct:     1 MKIAIIGQSAFGVDVYKELRKNGHEIVVVFTIPDKNGREDLL 42

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0009258 "10-formyltetrahydrofolate catabolic process" evidence=IEA

GO:0016155 "formyltetrahydrofolate dehydrogenase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|C9IZ36 ALDH1L1 "Cytosolic 10-formyltetrahydrofolate dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|C9JY00 ALDH1L1 "Cytosolic 10-formyltetrahydrofolate dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|C9JYZ6 ALDH1L1 "Cytosolic 10-formyltetrahydrofolate dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|D6RFJ7 ALDH1L1 "Cytosolic 10-formyltetrahydrofolate dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F8WC34 ALDH1L1 "Cytosolic 10-formyltetrahydrofolate dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

UNIPROTKB|F6UL10 ALDH1L1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 119 (46.9 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

UNIPROTKB|E2QSR7 ALDH1L1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

UNIPROTKB|Q8TBP8 ALDH1L1 "Aldehyde dehydrogenase 1 family, member L1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query:    62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
             +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct:     1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 40

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016742 "hydroxymethyl-, formyl- and related transferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8K009	AL1L2_MOUSE	1, ., 5, ., 1, ., 6	0.5283	0.4274	0.0574	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	124
cd08647	203	cd08647, FMT_core_FDH_N, 10-formyltetrahydrofolate	1e-15
cd08646	204	cd08646, FMT_core_Met-tRNA-FMT_N, Methionyl-tRNA f	0.001
COG0223	307	COG0223, Fmt, Methionyl-tRNA formyltransferase [Tr	0.001

>gnl|CDD|187716 cd08647, FMT_core_FDH_N, 10-formyltetrahydrofolate dehydrogenase (FDH), N-terminal hydrolase domain

 Score = 69.0 bits (169), Expect = 1e-15
 Identities = 24/41 (58%), Positives = 30/41 (73%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDI 102
           +++AVIGQS F  EVYK L+K GH VVGVFT+ DK  + D 
Sbjct: 1   MKIAVIGQSLFGQEVYKELRKEGHEVVGVFTIPDKDGKADP 41

This family represents the N-terminal hydrolase domain of the bifunctional protein 10-formyltetrahydrofolate dehydrogenase (FDH). This domain contains a 10-formyl-tetrahydrofolate (10-formyl-THF) binding site and shares sequence homology and structural topology with other enzymes utilizing this substrate. This domain functions as a hydrolase, catalyzing the conversion of 10-formyl-THF, a precursor for nucleotide biosynthesis, to tetrahydrofolate (THF). The overall FDH reaction mechanism is a coupling of two sequential reactions, a hydrolase and a formyl dehydrogenase, bridged by a substrate transfer step. The N-terminal hydrolase domain removes the formyl group from 10-formyl-THF and the C-terminal NADP-dependent dehydrogenase domain then reduces the formyl group to carbon dioxide. The two catalytic domains are connected by a third intermediate linker domain that transfers the formyl group, covalently attached to the sulfhydryl group of the phosphopantetheine arm, from the N-terminal domain to the C-terminal domain. Length = 203

>gnl|CDD|187715 cd08646, FMT_core_Met-tRNA-FMT_N, Methionyl-tRNA formyltransferase, N-terminal hydrolase domain

 Score = 36.3 bits (85), Expect = 0.001
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK 96
          +R+  +G   FA    + L K+GH VV V T  DK
Sbjct: 1  MRIVFMGTPDFAVPSLEALLKSGHEVVAVVTQPDK 35

Methionyl-tRNA formyltransferase (Met-tRNA-FMT), N-terminal formyltransferase domain. Met-tRNA-FMT transfers a formyl group from N-10 formyltetrahydrofolate to the amino terminal end of a methionyl-aminoacyl-tRNA acyl moiety, yielding formyl-Met-tRNA. Formyl-Met-tRNA plays essential role in protein translation initiation by forming complex with IF2. The formyl group plays a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. The N-terminal domain contains a Rossmann fold and it is the catalytic domain of the enzyme. Length = 204

>gnl|CDD|223301 COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]

 Score = 36.4 bits (85), Expect = 0.001
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN 98
          +R+   G   FA    + L + GH +V V T  DK  
Sbjct: 2  MRIVFFGTPEFAVPSLEALIEAGHEIVAVVTQPDKPA 38

Length = 307

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	124
COG0223	307	Fmt Methionyl-tRNA formyltransferase [Translation,	99.34
TIGR00460	313	fmt methionyl-tRNA formyltransferase. The top-scor	98.88
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.83
PRK06988	312	putative formyltransferase; Provisional	98.76
PLN02285	334	methionyl-tRNA formyltransferase	98.74
PRK00005	309	fmt methionyl-tRNA formyltransferase; Reviewed	98.71
KOG2452|consensus	881		98.62
PF00551	181	Formyl_trans_N: Formyl transferase; InterPro: IPR0	97.89
COG2910	211	Putative NADH-flavin reductase [General function p	97.6
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.59
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.0
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.92
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.87
PF00289	110	CPSase_L_chain: Carbamoyl-phosphate synthase L cha	95.67
CHL00194	317	ycf39 Ycf39; Provisional	95.65
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.55
PLN02695	370	GDP-D-mannose-3',5'-epimerase	95.51
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.34
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	95.18
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	95.07
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.88
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	94.88
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	94.8
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	94.71
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.59
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	94.47
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.42
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.37
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.33
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	94.3
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.24
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	94.2
PLN02240	352	UDP-glucose 4-epimerase	94.2
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.16
PRK13011	286	formyltetrahydrofolate deformylase; Reviewed	94.15
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.15
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.11
PRK08462	445	biotin carboxylase; Validated	94.05
PRK07326	237	short chain dehydrogenase; Provisional	94.03
PLN02650	351	dihydroflavonol-4-reductase	93.97
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	93.94
PLN02166	436	dTDP-glucose 4,6-dehydratase	93.87
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	93.86
PRK10675	338	UDP-galactose-4-epimerase; Provisional	93.81
PRK12833	467	acetyl-CoA carboxylase biotin carboxylase subunit;	93.79
TIGR03570	201	NeuD_NnaD sugar O-acyltransferase, sialic acid O-a	93.73
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	93.64
KOG1502|consensus	327		93.63
TIGR01921	324	DAP-DH diaminopimelate dehydrogenase. This model r	93.45
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	93.44
PLN00198	338	anthocyanidin reductase; Provisional	93.27
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	93.21
PLN02688	266	pyrroline-5-carboxylate reductase	93.19
PRK07417	279	arogenate dehydrogenase; Reviewed	93.17
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	93.15
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.05
PLN02427	386	UDP-apiose/xylose synthase	92.99
PLN00016	378	RNA-binding protein; Provisional	92.95
PRK09496	453	trkA potassium transporter peripheral membrane com	92.91
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	92.66
PLN02583	297	cinnamoyl-CoA reductase	92.66
PLN02896	353	cinnamyl-alcohol dehydrogenase	92.64
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	92.64
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	92.6
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	92.59
PLN02214	342	cinnamoyl-CoA reductase	92.52
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	92.52
PRK10538	248	malonic semialdehyde reductase; Provisional	92.43
PRK08264	238	short chain dehydrogenase; Validated	92.41
PRK12828	239	short chain dehydrogenase; Provisional	92.27
PRK06027	286	purU formyltetrahydrofolate deformylase; Reviewed	92.19
PRK07178	472	pyruvate carboxylase subunit A; Validated	92.18
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	92.15
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	92.09
PRK08463	478	acetyl-CoA carboxylase subunit A; Validated	92.06
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	92.03
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	91.97
PRK07454	241	short chain dehydrogenase; Provisional	91.92
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	91.87
PRK09072	263	short chain dehydrogenase; Provisional	91.82
PLN02206	442	UDP-glucuronate decarboxylase	91.73
PRK09496	453	trkA potassium transporter peripheral membrane com	91.71
PRK07023	243	short chain dehydrogenase; Provisional	91.71
PRK15059	292	tartronate semialdehyde reductase; Provisional	91.66
PRK06179	270	short chain dehydrogenase; Provisional	91.63
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	91.58
PRK06138	252	short chain dehydrogenase; Provisional	91.56
PRK06180	277	short chain dehydrogenase; Provisional	91.51
PRK05875	276	short chain dehydrogenase; Provisional	91.38
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	91.26
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	91.02
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	90.97
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	90.91
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	90.83
PRK07825	273	short chain dehydrogenase; Provisional	90.81
PRK06719	157	precorrin-2 dehydrogenase; Validated	90.81
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	90.67
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	90.64
PRK07060	245	short chain dehydrogenase; Provisional	90.63
PRK06111	450	acetyl-CoA carboxylase biotin carboxylase subunit;	90.6
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	90.6
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	90.56
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	90.54
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	90.48
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	90.43
PRK06182	273	short chain dehydrogenase; Validated	90.41
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	90.37
PRK07102	243	short chain dehydrogenase; Provisional	90.36
PRK08300	302	acetaldehyde dehydrogenase; Validated	90.24
PRK05586	447	biotin carboxylase; Validated	90.15
PLN00093	450	geranylgeranyl diphosphate reductase; Provisional	90.11
PRK12829	264	short chain dehydrogenase; Provisional	90.09
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	90.08
PRK06124	256	gluconate 5-dehydrogenase; Provisional	89.99
PRK12939	250	short chain dehydrogenase; Provisional	89.94
PRK05884	223	short chain dehydrogenase; Provisional	89.94
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	89.88
PRK12827	249	short chain dehydrogenase; Provisional	89.8
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	89.8
COG3804	350	Uncharacterized conserved protein related to dihyd	89.68
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	89.67
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	89.6
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	89.53
PLN02256	304	arogenate dehydrogenase	89.51
PRK09186	256	flagellin modification protein A; Provisional	89.47
PRK04148	134	hypothetical protein; Provisional	89.47
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	89.4
PRK05479	330	ketol-acid reductoisomerase; Provisional	89.34
PRK13303	265	L-aspartate dehydrogenase; Provisional	89.33
PRK06914	280	short chain dehydrogenase; Provisional	89.31
PRK08654	499	pyruvate carboxylase subunit A; Validated	89.3
PRK08017	256	oxidoreductase; Provisional	89.26
PRK06849	389	hypothetical protein; Provisional	89.25
TIGR00036	266	dapB dihydrodipicolinate reductase.	89.21
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	89.14
PRK07806	248	short chain dehydrogenase; Provisional	89.12
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.99
PRK07577	234	short chain dehydrogenase; Provisional	88.96
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	88.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	88.89
PRK02318	381	mannitol-1-phosphate 5-dehydrogenase; Provisional	88.88
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	88.85
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	88.79
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	88.74
PLN02778	298	3,5-epimerase/4-reductase	88.72
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	88.72
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	88.58
PRK09134	258	short chain dehydrogenase; Provisional	88.58
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	88.57
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	88.49
PRK12320	699	hypothetical protein; Provisional	88.44
PRK06172	253	short chain dehydrogenase; Provisional	88.38
PRK08507	275	prephenate dehydrogenase; Validated	88.35
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	88.33
PRK09135	249	pteridine reductase; Provisional	88.3
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	88.3
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	88.28
PLN02686	367	cinnamoyl-CoA reductase	88.25
PRK07890	258	short chain dehydrogenase; Provisional	88.25
PRK05866	293	short chain dehydrogenase; Provisional	88.23
PLN02653	340	GDP-mannose 4,6-dehydratase	88.22
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	88.12
PRK08219	227	short chain dehydrogenase; Provisional	88.11
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.11
PRK13304	265	L-aspartate dehydrogenase; Reviewed	88.05
PRK07856	252	short chain dehydrogenase; Provisional	88.05
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	88.05
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	88.02
PRK07478	254	short chain dehydrogenase; Provisional	87.92
PRK07774	250	short chain dehydrogenase; Provisional	87.92
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	87.84
PRK09291	257	short chain dehydrogenase; Provisional	87.83
PF13738	203	Pyr_redox_3: Pyridine nucleotide-disulphide oxidor	87.82
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.8
PRK08177	225	short chain dehydrogenase; Provisional	87.78
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	87.55
PLN02712	667	arogenate dehydrogenase	87.51
PRK08628	258	short chain dehydrogenase; Provisional	87.5
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	87.48
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	87.28
PRK08309	177	short chain dehydrogenase; Provisional	87.25
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	87.23
PLN02712	667	arogenate dehydrogenase	87.14
PRK07814	263	short chain dehydrogenase; Provisional	87.14
PRK00048	257	dihydrodipicolinate reductase; Provisional	87.13
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	87.1
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	87.06
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	87.03
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	87.02
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	86.98
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	86.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	86.85
PRK06949	258	short chain dehydrogenase; Provisional	86.75
PRK06523	260	short chain dehydrogenase; Provisional	86.71
PRK05867	253	short chain dehydrogenase; Provisional	86.62
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	86.52
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	86.51
PRK06841	255	short chain dehydrogenase; Provisional	86.51
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	86.46
PRK05993	277	short chain dehydrogenase; Provisional	86.37
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	86.31
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	86.27
PRK08703	239	short chain dehydrogenase; Provisional	86.25
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	86.14
PLN02572	442	UDP-sulfoquinovose synthase	86.12
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	86.04
PRK08278	273	short chain dehydrogenase; Provisional	86.03
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	85.98
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	85.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	85.85
PRK06114	254	short chain dehydrogenase; Provisional	85.85
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	85.84
PTZ00431	260	pyrroline carboxylate reductase; Provisional	85.77
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	85.62
PRK06924	251	short chain dehydrogenase; Provisional	85.59
PRK07680	273	late competence protein ComER; Validated	85.53
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	85.47
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	85.43
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	85.41
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	85.41
PLN03209	576	translocon at the inner envelope of chloroplast su	85.36
PRK06057	255	short chain dehydrogenase; Provisional	85.33
PLN02828	268	formyltetrahydrofolate deformylase	85.29
PRK08655	437	prephenate dehydrogenase; Provisional	85.27
PRK08277	278	D-mannonate oxidoreductase; Provisional	85.09
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	85.05
PRK07035	252	short chain dehydrogenase; Provisional	84.95
PRK06500	249	short chain dehydrogenase; Provisional	84.93
PRK08267	260	short chain dehydrogenase; Provisional	84.85
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	84.75
PRK05650	270	short chain dehydrogenase; Provisional	84.63
PRK07201	657	short chain dehydrogenase; Provisional	84.62
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	84.51
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	84.5
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	84.5
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	84.39
PRK07067	257	sorbitol dehydrogenase; Provisional	84.38
PLN02353	473	probable UDP-glucose 6-dehydrogenase	84.32
PRK06125	259	short chain dehydrogenase; Provisional	84.25
PRK07024	257	short chain dehydrogenase; Provisional	84.23
PRK08251	248	short chain dehydrogenase; Provisional	84.18
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	84.16
PRK11579	346	putative oxidoreductase; Provisional	84.15
PRK07062	265	short chain dehydrogenase; Provisional	84.02
PRK07576	264	short chain dehydrogenase; Provisional	84.0
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	83.97
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	83.96
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	83.84
TIGR00639	190	PurN phosphoribosylglycinamide formyltransferase,	83.82
PRK07074	257	short chain dehydrogenase; Provisional	83.81
PRK08085	254	gluconate 5-dehydrogenase; Provisional	83.77
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	83.74
PRK08862	227	short chain dehydrogenase; Provisional	83.67
PRK08213	259	gluconate 5-dehydrogenase; Provisional	83.58
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	83.45
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	83.39
PRK05647	200	purN phosphoribosylglycinamide formyltransferase;	83.31
PRK12937	245	short chain dehydrogenase; Provisional	83.27
PRK06482	276	short chain dehydrogenase; Provisional	83.21
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	83.21
PRK06181	263	short chain dehydrogenase; Provisional	83.09
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	83.08
PRK08263	275	short chain dehydrogenase; Provisional	83.05
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	83.0
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	83.0
PLN02358	338	glyceraldehyde-3-phosphate dehydrogenase	82.94
PRK10669	558	putative cation:proton antiport protein; Provision	82.92
PRK06101	240	short chain dehydrogenase; Provisional	82.92
PRK12744	257	short chain dehydrogenase; Provisional	82.89
TIGR02712	1201	urea_carbox urea carboxylase. Members of this fami	82.88
TIGR01746	367	Thioester-redct thioester reductase domain. It has	82.87
PF13434	341	K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi	82.84
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	82.75
PRK06196	315	oxidoreductase; Provisional	82.68
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	82.53
PRK12746	254	short chain dehydrogenase; Provisional	82.47
PRK07579	245	hypothetical protein; Provisional	82.45
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	82.38
PRK07453	322	protochlorophyllide oxidoreductase; Validated	82.31
PF00044	151	Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase,	82.3
PRK06194	287	hypothetical protein; Provisional	82.26
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	82.24
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	82.18
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	82.07
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	81.86
PRK12480	330	D-lactate dehydrogenase; Provisional	81.85
PRK05693	274	short chain dehydrogenase; Provisional	81.76
PRK05472	213	redox-sensing transcriptional repressor Rex; Provi	81.7
PRK06545	359	prephenate dehydrogenase; Validated	81.66
PRK07494	388	2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio	81.56
PRK03659	601	glutathione-regulated potassium-efflux system prot	81.47
PRK06223	307	malate dehydrogenase; Reviewed	81.47
PRK07832	272	short chain dehydrogenase; Provisional	81.46
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	81.42
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	81.33
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	81.32
PRK06398	258	aldose dehydrogenase; Validated	81.29
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	81.28
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	81.28
PRK08265	261	short chain dehydrogenase; Provisional	81.19
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	81.06
PRK06701	290	short chain dehydrogenase; Provisional	81.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	80.84
PRK06197	306	short chain dehydrogenase; Provisional	80.83
PRK07236	386	hypothetical protein; Provisional	80.75
PRK07097	265	gluconate 5-dehydrogenase; Provisional	80.7
PRK07775	274	short chain dehydrogenase; Provisional	80.56
PRK06270	341	homoserine dehydrogenase; Provisional	80.54
PRK05865	854	hypothetical protein; Provisional	80.54
PRK12743	256	oxidoreductase; Provisional	80.42
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	80.28
PLN02735	1102	carbamoyl-phosphate synthase	80.19
PRK08643	256	acetoin reductase; Validated	80.19
PRK06483	236	dihydromonapterin reductase; Provisional	80.1

>COG0223 Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]

Probab=99.34  E-value=1.3e-12  Score=109.39  Aligned_cols=52  Identities=25%  Similarity=0.291  Sum_probs=46.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCCC------Ccc----------eeeehhhhcc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRE------DIV----------DEMYSLWRVA  113 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g~------~~l----------~~~~~~~r~~  113 (124)
                      |||+|||||+||+++|++|+++||||++|+||||||.+.      ++|          ++|+.++|..
T Consensus         2 mkivF~GTp~fa~~~L~~L~~~~~eivaV~Tqpdkp~gR~~~l~~spVk~~A~~~~ipv~qP~~l~~~   69 (307)
T COG0223           2 MRIVFFGTPEFAVPSLEALIEAGHEIVAVVTQPDKPAGRGKKLTPSPVKRLALELGIPVFQPEKLNDP   69 (307)
T ss_pred             cEEEEEcCchhhHHHHHHHHhCCCceEEEEeCCCCccCCCCcCCCChHHHHHHHcCCceeccccCCcH
Confidence            899999999999999999999999999999999999876      333          7888888753

>TIGR00460 fmt methionyl-tRNA formyltransferase

Probab=98.88  E-value=2.7e-09  Score=87.43  Aligned_cols=38  Identities=34%  Similarity=0.556  Sum_probs=36.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |||+||||++||.++|++|+++||+|++|+|+||++.+
T Consensus         1 mkIvf~Gs~~~a~~~L~~L~~~~~~i~~Vvt~pd~~~~   38 (313)
T TIGR00460         1 LRIVFFGTPTFSLPVLEELREDNFEVVGVVTQPDKPAG   38 (313)
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCcEEEEEcCCCCccC
Confidence            79999999999999999999999999999999999864

The top-scoring characterized proteins other than methionyl-tRNA formyltransferase (fmt) itself are formyltetrahydrofolate dehydrogenases. The mitochondrial methionyl-tRNA formyltransferases are so divergent that, in a multiple alignment of bacterial fmt, mitochondrial fmt, and formyltetrahydrofolate dehydrogenases, the mitochondrial fmt appears the most different. However, because both bacterial and mitochondrial fmt are included in the seed alignment, all credible fmt sequences score higher than any non-fmt sequence. This enzyme modifies Met on initiator tRNA to f-Met.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.83  E-value=4.8e-09  Score=92.31  Aligned_cols=38  Identities=18%  Similarity=0.285  Sum_probs=36.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |||+|||||+||+++|++|+++||+|++|+|+||+|.+
T Consensus         1 mkivf~g~~~~a~~~l~~L~~~~~~i~~V~t~pd~~~~   38 (660)
T PRK08125          1 MKAVVFAYHDIGCVGIEALLAAGYEIAAVFTHTDNPGE   38 (660)
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCcC
Confidence            79999999999999999999999999999999999864

>PRK06988 putative formyltransferase; Provisional

Probab=98.76  E-value=1.2e-08  Score=83.96  Aligned_cols=38  Identities=21%  Similarity=0.227  Sum_probs=36.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |||+||||++||.++|++|++++++|++|+|+||+|.+
T Consensus         3 mkIvf~Gs~~~a~~~L~~L~~~~~~i~~Vvt~~d~~~~   40 (312)
T PRK06988          3 PRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPTE   40 (312)
T ss_pred             cEEEEEeCcHHHHHHHHHHHhCCCCEEEEEcCCCCCcc
Confidence            89999999999999999999999999999999999864

>PLN02285 methionyl-tRNA formyltransferase

Probab=98.74  E-value=1.5e-08  Score=84.43  Aligned_cols=40  Identities=23%  Similarity=0.230  Sum_probs=36.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC------CCeEEEEEcCCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN------GHSVVGVFTVVDKANR   99 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~------gheVvgVVTqPDKP~g   99 (124)
                      ++|||+||||++||+++|++|+++      +++|++|+|+||++.+
T Consensus         5 ~~~kI~f~Gt~~fa~~~L~~L~~~~~~~~~~~~iv~Vvt~~~~~~g   50 (334)
T PLN02285          5 RKKRLVFLGTPEVAATVLDALLDASQAPDSAFEVAAVVTQPPARRG   50 (334)
T ss_pred             CccEEEEEECCHHHHHHHHHHHhhhhccCCCCeEEEEEeCCCCccc
Confidence            459999999999999999999973      6999999999999854

>PRK00005 fmt methionyl-tRNA formyltransferase; Reviewed

Probab=98.71  E-value=2.3e-08  Score=81.55  Aligned_cols=38  Identities=34%  Similarity=0.559  Sum_probs=35.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |||+||||++||.++|++|++++|+|++|+|+||+|.+
T Consensus         1 mkIvf~G~~~~a~~~L~~L~~~~~~i~~Vvt~~~~~~~   38 (309)
T PRK00005          1 MRIVFMGTPEFAVPSLKALLESGHEVVAVVTQPDRPAG   38 (309)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCC
Confidence            79999999999999999999889999999999999854

>KOG2452|consensus

Probab=98.62  E-value=4.3e-08  Score=89.20  Aligned_cols=55  Identities=53%  Similarity=0.792  Sum_probs=51.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCcc----------eeeehhhhcceee
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIV----------DEMYSLWRVALTA  116 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~~l----------~~~~~~~r~~~~~  116 (124)
                      |||+++|.+.||..+..+|.++||||++|+|-|||-.+.|+|          |++|++||.|.++
T Consensus         1 mkiaiigqs~fg~~vy~~lrk~gheiv~vftipdk~g~~d~l~~ea~kdgvpv~k~srwr~k~~~   65 (881)
T KOG2452|consen    1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKAQA   65 (881)
T ss_pred             CeeEEechhhhhHHHHHHHHhcCceEEEEEEecCCCCCcCcccccccccCcceechhhhhhhccc
Confidence            799999999999999999999999999999999998877776          9999999999875

>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group

Probab=97.89  E-value=2.6e-05  Score=58.99  Aligned_cols=38  Identities=34%  Similarity=0.540  Sum_probs=34.5

Q ss_pred             ceEEEE--cCCHHHHHHHHHHHhCCCe--EEEEEcCCCCCCC
Q psy16773         62 LRVAVI--GQSSFAAEVYKLLKKNGHS--VVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFm--GTp~FAa~iLeeLl~~ghe--VvgVVTqPDKP~g   99 (124)
                      |||+||  |++.++..+|++|.+++++  |++|+|++|++.+
T Consensus         1 mrI~~~~Sg~~~~~~~~l~~l~~~~~~~~iv~Vit~~~~~~~   42 (181)
T PF00551_consen    1 MRIVFFGSGSGSFLKALLEALKARGHNVEIVLVITNPDKPRG   42 (181)
T ss_dssp             EEEEEEESSSSHHHHHHHHHHHTTSSEEEEEEEEESSTTTHH
T ss_pred             CEEEEEEcCCCHHHHHHHHHHHhCCCCceEEEEecccccccc
Confidence            899999  8899999999999988875  9999999999863

Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.60  E-value=8.7e-05  Score=60.48  Aligned_cols=42  Identities=24%  Similarity=0.381  Sum_probs=37.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCcc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIV  103 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~~l  103 (124)
                      |||+++|. |..|..+++|+.++||||+||+++|.|-...+++
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~   43 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV   43 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc
Confidence            79999998 9999999999999999999999999988654443

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.59  E-value=0.0042  Score=44.59  Aligned_cols=36  Identities=25%  Similarity=0.360  Sum_probs=32.0

Q ss_pred             EEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         64 VAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        64 IVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |+++|. |.+|..++++|+++||+|.++++++.+...
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~   37 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED   37 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence            678895 999999999999999999999999886543

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.00  E-value=0.012  Score=45.06  Aligned_cols=36  Identities=25%  Similarity=0.233  Sum_probs=32.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +|||+++|. |.+|..++++|+++||+|+++...+++
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~   53 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDK   53 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence            479999995 999999999999999999999988775

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.92  E-value=0.0094  Score=47.02  Aligned_cols=38  Identities=21%  Similarity=0.399  Sum_probs=35.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |+|+++|.|.||..+.+.|.++||+|+.|...+++-..
T Consensus         1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~   38 (225)
T COG0569           1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEE   38 (225)
T ss_pred             CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence            78999999999999999999999999999999987543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.87  E-value=0.02  Score=41.84  Aligned_cols=37  Identities=16%  Similarity=0.082  Sum_probs=31.9

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.++|++.|. +.+|..+.+.|+++||+|+++.+.+++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~   41 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEA   41 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhH
Confidence            4468999997 999999999999999999888877654

>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below)

Probab=95.67  E-value=0.012  Score=42.50  Aligned_cols=37  Identities=19%  Similarity=0.293  Sum_probs=33.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      -||.++|.|++|+.+++++.+.|++.++|.++||+..
T Consensus         3 kkvLIanrGeia~r~~ra~r~~Gi~tv~v~s~~d~~s   39 (110)
T PF00289_consen    3 KKVLIANRGEIAVRIIRALRELGIETVAVNSNPDTVS   39 (110)
T ss_dssp             SEEEESS-HHHHHHHHHHHHHTTSEEEEEEEGGGTTG
T ss_pred             CEEEEECCCHHHHHHHHHHHHhCCcceeccCchhccc
Confidence            4799999999999999999999999999999999864

CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.65  E-value=0.019  Score=45.67  Aligned_cols=35  Identities=17%  Similarity=0.305  Sum_probs=31.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||++.|. |.+|..++++|+++||+|.++..++++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~   36 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK   36 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH
Confidence            68999995 999999999999999999999988654

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.55  E-value=0.044  Score=39.30  Aligned_cols=36  Identities=19%  Similarity=0.412  Sum_probs=32.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHh-CCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKK-NGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~-~gheVvgVVTqPDKP   97 (124)
                      |||++.|. |..|..+.+.+.+ .+++++|++...+.+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~   38 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSA   38 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTST
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcc
Confidence            79999999 9999999999998 579999999988743

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=95.51  E-value=0.04  Score=45.43  Aligned_cols=41  Identities=20%  Similarity=0.273  Sum_probs=35.6

Q ss_pred             ccCCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         55 SQIHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        55 ~~M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..|..++|||++.|. |.+|..+.+.|+++||+|.++...++
T Consensus        15 ~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~   56 (370)
T PLN02695         15 PYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKN   56 (370)
T ss_pred             CCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccc
Confidence            347778899999997 99999999999999999999986543

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.34  E-value=0.022  Score=37.71  Aligned_cols=35  Identities=26%  Similarity=0.433  Sum_probs=29.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCC---CeEEEE-EcCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNG---HSVVGV-FTVVDKA   97 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~g---heVvgV-VTqPDKP   97 (124)
                      ||+|+|+|..|..+++.|++.|   ++|.-+ -.+|++.
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~   39 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKA   39 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHH
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHH
Confidence            7999999999999999999998   899865 5566543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=95.18  E-value=0.052  Score=43.87  Aligned_cols=39  Identities=15%  Similarity=0.196  Sum_probs=33.4

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |++.+|||+++|.|.+|.-.--.|.+.||+|..+...+.
T Consensus         1 ~~~~~m~I~IiG~GaiG~~lA~~L~~~g~~V~~~~r~~~   39 (313)
T PRK06249          1 MDSETPRIGIIGTGAIGGFYGAMLARAGFDVHFLLRSDY   39 (313)
T ss_pred             CCCcCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence            456679999999999999988888888999998887653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.07  E-value=0.033  Score=41.67  Aligned_cols=40  Identities=20%  Similarity=0.258  Sum_probs=34.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKANRED  101 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~  101 (124)
                      |+|++.|. |.+|..++++|+++||+|.++..+|++.....
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~   41 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA   41 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence            56777776 99999999999999999999999998775433

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.88  E-value=0.047  Score=42.07  Aligned_cols=34  Identities=18%  Similarity=0.277  Sum_probs=29.1

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||.|+| +|.+|..+...|.++||+|..+-..++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~   35 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLE   35 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHH
Confidence            7899997 899999999999999999986655553

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=94.88  E-value=0.041  Score=42.34  Aligned_cols=36  Identities=31%  Similarity=0.462  Sum_probs=28.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||.++|.|-+|.+.-..|.+.||+|+|+=.++++.
T Consensus         1 M~I~ViGlGyvGl~~A~~lA~~G~~V~g~D~~~~~v   36 (185)
T PF03721_consen    1 MKIAVIGLGYVGLPLAAALAEKGHQVIGVDIDEEKV   36 (185)
T ss_dssp             -EEEEE--STTHHHHHHHHHHTTSEEEEE-S-HHHH
T ss_pred             CEEEEECCCcchHHHHHHHHhCCCEEEEEeCChHHH
Confidence            899999999999999999999999999999988855

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=94.80  E-value=0.059  Score=41.67  Aligned_cols=36  Identities=11%  Similarity=0.159  Sum_probs=31.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      +|++.|. |.+|..++++|+++||+|.++.++|++..
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~   37 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA   37 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc
Confidence            4777777 99999999999999999999999998654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=94.71  E-value=0.08  Score=41.17  Aligned_cols=36  Identities=25%  Similarity=0.237  Sum_probs=31.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++|++.|. |.+|..+.+.|+++||+|+++...+++
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            378999995 999999999999999999999887654

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.59  E-value=0.053  Score=43.88  Aligned_cols=36  Identities=22%  Similarity=0.242  Sum_probs=31.4

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .|||.|+|.|.+|..+...|.++||+|..+-+.+++
T Consensus         4 ~m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~   39 (328)
T PRK14618          4 GMRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEF   39 (328)
T ss_pred             CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            389999999999999999999999999887776553

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.47  E-value=0.088  Score=40.16  Aligned_cols=37  Identities=24%  Similarity=0.386  Sum_probs=32.1

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      |+|.+.| ||-+|..+.+.|+++||+|.++-+.+++..
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~   38 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD   38 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc
Confidence            4589999 699999999999999999999998776543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.42  E-value=0.086  Score=39.03  Aligned_cols=37  Identities=16%  Similarity=0.100  Sum_probs=32.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.++|++.|. +.+|..+.+.|+++|++|+++.+.+++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~   41 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEA   41 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            4468999997 999999999999999999999888764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.37  E-value=0.1  Score=43.76  Aligned_cols=38  Identities=26%  Similarity=0.267  Sum_probs=33.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ..|||++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~   97 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGI   97 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhc
Confidence            3479999997 9999999999999999999998877543

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.33  E-value=0.034  Score=41.21  Aligned_cols=35  Identities=29%  Similarity=0.626  Sum_probs=29.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      .+|||.|+|.|..|...-..|.+.||+|++|+..-
T Consensus         9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs   43 (127)
T PF10727_consen    9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRS   43 (127)
T ss_dssp             ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCH
T ss_pred             CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            35999999999999999999988999999998754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=94.30  E-value=0.08  Score=41.29  Aligned_cols=35  Identities=20%  Similarity=0.300  Sum_probs=30.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||.++|+|.+|..+-..|.+.||+|..+...+++
T Consensus         1 m~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~   35 (304)
T PRK06522          1 MKIAILGAGAIGGLFGAALAQAGHDVTLVARRGAH   35 (304)
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEECChHH
Confidence            68999999999999988888889999988875543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.24  E-value=0.14  Score=37.54  Aligned_cols=38  Identities=16%  Similarity=0.150  Sum_probs=31.6

Q ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         58 HKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        58 ~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..+.++|++.|. +.+|..+.+.|+++|++|+.+..+++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~   40 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE   40 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence            344568999987 99999999999999999977777665

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=94.20  E-value=0.098  Score=40.29  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=31.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |+|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD   36 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence            57999986 999999999999999999999987765

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02240 UDP-glucose 4-epimerase

Probab=94.20  E-value=0.14  Score=40.41  Aligned_cols=37  Identities=16%  Similarity=0.114  Sum_probs=31.0

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |+...+||++.|. |.+|..+.+.|+++||+|+++...
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4455678999986 999999999999999999988643

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.16  E-value=0.12  Score=34.96  Aligned_cols=32  Identities=28%  Similarity=0.440  Sum_probs=27.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTq   93 (124)
                      |||+++|.|.+|...++.+.+.  +.+|+||+..
T Consensus         1 i~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~   34 (120)
T PF01408_consen    1 IRVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDP   34 (120)
T ss_dssp             EEEEEESTSHHHHHHHHHHHHTTTTEEEEEEECS
T ss_pred             CEEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            6899999999999999998875  4688888654

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK13011 formyltetrahydrofolate deformylase; Reviewed

Probab=94.15  E-value=0.058  Score=44.64  Aligned_cols=35  Identities=17%  Similarity=0.121  Sum_probs=26.8

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHh------CCCeEEEEEc-CCC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKK------NGHSVVGVFT-VVD   95 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~------~gheVvgVVT-qPD   95 (124)
                      .++|||+||||+.  -..|++|++      .+++|++|++ +||
T Consensus        87 ~~~~ri~vl~Sg~--g~nl~al~~~~~~~~~~~~i~~visn~~~  128 (286)
T PRK13011         87 AARPKVLIMVSKF--DHCLNDLLYRWRIGELPMDIVGVVSNHPD  128 (286)
T ss_pred             ccCceEEEEEcCC--cccHHHHHHHHHcCCCCcEEEEEEECCcc
Confidence            3468999999984  567777773      2589999999 554

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.15  E-value=0.16  Score=41.60  Aligned_cols=42  Identities=19%  Similarity=0.265  Sum_probs=35.9

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ++.++|||+++|++..+...++++.+.||+|+.+-..|+.|.
T Consensus         8 ~~~~~~~ilIiG~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~   49 (395)
T PRK09288          8 LSPSATRVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAPA   49 (395)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCch
Confidence            344668999999999999999998888999999988887653

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.11  E-value=0.066  Score=39.47  Aligned_cols=35  Identities=20%  Similarity=0.290  Sum_probs=28.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||.|+|.|..|.++.+.|+++||+|.+-=..+++
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~   36 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEK   36 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHH
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhh
Confidence            89999999999999999999999999765545443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08462 biotin carboxylase; Validated

Probab=94.05  E-value=0.12  Score=43.64  Aligned_cols=36  Identities=14%  Similarity=0.413  Sum_probs=33.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      -||.++|.|++++++++++.+.|+++++|.+.+|+.
T Consensus         5 k~ili~~~g~~~~~~~~~~~~~G~~~v~~~~~~d~~   40 (445)
T PRK08462          5 KRILIANRGEIALRAIRTIQEMGKEAIAIYSTADKD   40 (445)
T ss_pred             CEEEEECCcHHHHHHHHHHHHcCCCEEEEechhhcC
Confidence            489999999999999999999999999999999974

>PRK07326 short chain dehydrogenase; Provisional

Probab=94.03  E-value=0.094  Score=38.75  Aligned_cols=36  Identities=11%  Similarity=0.042  Sum_probs=31.1

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+|++.|. +.+|..+.+.|+++|++|+++.+.|++
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~   42 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKE   42 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHH
Confidence            467888986 999999999999999999999887754

>PLN02650 dihydroflavonol-4-reductase

Probab=93.97  E-value=0.14  Score=40.97  Aligned_cols=38  Identities=16%  Similarity=0.074  Sum_probs=32.6

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.+++|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~   41 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPAN   41 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcch
Confidence            34578999997 999999999999999999998877654

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=93.94  E-value=0.082  Score=41.73  Aligned_cols=34  Identities=26%  Similarity=0.445  Sum_probs=30.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|+|.|..|..+...|.+.||+|..+-+.++
T Consensus         2 mkI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~   35 (325)
T PRK00094          2 MKIAVLGAGSWGTALAIVLARNGHDVTLWARDPE   35 (325)
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            7999999999999999999999999977766554

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=93.87  E-value=0.13  Score=44.14  Aligned_cols=36  Identities=22%  Similarity=0.297  Sum_probs=31.8

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      ...+.|||++.|. |.+|..+.++|+++||+|+++-.
T Consensus       116 ~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr  152 (436)
T PLN02166        116 IGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDN  152 (436)
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence            4556699999997 99999999999999999999864

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=93.86  E-value=0.087  Score=45.00  Aligned_cols=38  Identities=16%  Similarity=0.137  Sum_probs=34.1

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .|||+|+|.|.+|.+.-..|.++||+|+++=..+++..
T Consensus         3 ~~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~   40 (415)
T PRK11064          3 FETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVD   40 (415)
T ss_pred             ccEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence            48999999999999999999999999999988877653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=93.81  E-value=0.15  Score=39.97  Aligned_cols=31  Identities=32%  Similarity=0.390  Sum_probs=27.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |||++.|. |.+|..+.+.|+++||+|+++-.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~   32 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDN   32 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEec
Confidence            68999995 99999999999999999998743

>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional

Probab=93.79  E-value=0.17  Score=43.61  Aligned_cols=36  Identities=17%  Similarity=0.274  Sum_probs=33.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .||.++|.|++|.++++++.+.|++++++.+.+|+-
T Consensus         6 ~~vLi~~~geia~~ii~aa~~lG~~~v~~~s~~d~~   41 (467)
T PRK12833          6 RKVLVANRGEIAVRIIRAARELGMRTVAACSDADRD   41 (467)
T ss_pred             cEEEEECCcHHHHHHHHHHHHcCCeEEEEECCCCCC
Confidence            589999999999999999999999999999988753

>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family

Probab=93.73  E-value=0.19  Score=36.27  Aligned_cols=32  Identities=19%  Similarity=0.405  Sum_probs=28.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +++++|++.+|..+++.|.+.|++++|.+...
T Consensus         1 ~~~I~Gag~~g~~~~~~l~~~g~~vvgfid~~   32 (201)
T TIGR03570         1 KLVIIGAGGHGRVVADIAEDSGWEIVGFLDDN   32 (201)
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCCEEEEEEcCC
Confidence            47899999999999999988899999999764

These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=93.64  E-value=0.12  Score=41.12  Aligned_cols=33  Identities=12%  Similarity=0.104  Sum_probs=27.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCC----CeEEEEEc
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNG----HSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~g----heVvgVVT   92 (124)
                      ..|||.|+|.|.+|..+...|+++|    ++|...-.
T Consensus         2 ~~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r   38 (279)
T PRK07679          2 SIQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNR   38 (279)
T ss_pred             CCCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECC
Confidence            3489999999999999999999887    66655433

>KOG1502|consensus

Probab=93.63  E-value=0.15  Score=43.84  Aligned_cols=40  Identities=23%  Similarity=0.285  Sum_probs=35.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      ..++|.+-|. |-+|..+++.|+++||.|.|.++.|.++.+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~   45 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK   45 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence            4578999998 999999999999999999999999997533

>TIGR01921 DAP-DH diaminopimelate dehydrogenase

Probab=93.45  E-value=0.17  Score=43.20  Aligned_cols=36  Identities=25%  Similarity=0.492  Sum_probs=31.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      +++||+++|+|.+|..+++.+.++ +.|++||++..|
T Consensus         2 ~kIRVgIVG~GnIGr~~a~al~~~pd~ELVgV~dr~~   38 (324)
T TIGR01921         2 SKIRAAIVGYGNLGRSVEKAIQQQPDMELVGVFSRRG   38 (324)
T ss_pred             CCcEEEEEeecHHHHHHHHHHHhCCCcEEEEEEcCCc
Confidence            359999999999999999888765 689999998875

This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=93.44  E-value=0.12  Score=40.57  Aligned_cols=31  Identities=23%  Similarity=0.341  Sum_probs=28.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |||+++|.|.+|..+-..|.++||+|..+..
T Consensus         1 mkI~IiG~G~iG~~~a~~L~~~g~~V~~~~r   31 (305)
T PRK12921          1 MRIAVVGAGAVGGTFGGRLLEAGRDVTFLVR   31 (305)
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCCceEEEec
Confidence            7899999999999999999988999988876

>PLN00198 anthocyanidin reductase; Provisional

Probab=93.27  E-value=0.24  Score=39.31  Aligned_cols=36  Identities=25%  Similarity=0.269  Sum_probs=31.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +++|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~   45 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN   45 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence            478999995 999999999999999999998887654

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=93.21  E-value=0.11  Score=43.78  Aligned_cols=36  Identities=33%  Similarity=0.444  Sum_probs=32.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||.|+|.|.+|.+.-..|.++||+|+++-..+++.
T Consensus         1 mkI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v   36 (411)
T TIGR03026         1 MKIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKV   36 (411)
T ss_pred             CEEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence            689999999999999999999999999987776654

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PLN02688 pyrroline-5-carboxylate reductase

Probab=93.19  E-value=0.11  Score=40.32  Aligned_cols=29  Identities=24%  Similarity=0.382  Sum_probs=25.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC----eEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH----SVVGV   90 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh----eVvgV   90 (124)
                      |||.|+|.|.+|..+.+.|+++||    +|...
T Consensus         1 ~kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~   33 (266)
T PLN02688          1 FRVGFIGAGKMAEAIARGLVASGVVPPSRISTA   33 (266)
T ss_pred             CeEEEECCcHHHHHHHHHHHHCCCCCcceEEEE
Confidence            789999999999999999999887    66544

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.17  E-value=0.11  Score=41.39  Aligned_cols=35  Identities=20%  Similarity=0.348  Sum_probs=30.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||.|+|.|.+|..+...|.++||+|.++-..+++
T Consensus         1 m~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~   35 (279)
T PRK07417          1 MKIGIVGLGLIGGSLGLDLRSLGHTVYGVSRREST   35 (279)
T ss_pred             CeEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            68999999999999999999889999998876653

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=93.15  E-value=0.28  Score=38.53  Aligned_cols=37  Identities=22%  Similarity=0.159  Sum_probs=31.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++|++.|. |.+|..+.+.|+++||+|+++...+++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~   41 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKD   41 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcc
Confidence            3478999996 999999999999999999988777654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.05  E-value=0.24  Score=36.15  Aligned_cols=34  Identities=18%  Similarity=0.199  Sum_probs=28.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++|++.|. +.+|..+.+.|+++||+|+.+....+
T Consensus         7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~   41 (249)
T PRK12825          7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDE   41 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence            57999986 99999999999999999877666554

>PLN02427 UDP-apiose/xylose synthase

Probab=92.99  E-value=0.21  Score=40.77  Aligned_cols=36  Identities=19%  Similarity=0.274  Sum_probs=30.8

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      ++|||++.|. |.+|..+++.|+++ ||+|+++...++
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~   50 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYND   50 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCch
Confidence            4589999996 99999999999988 599999876543

>PLN00016 RNA-binding protein; Provisional

Probab=92.95  E-value=0.17  Score=41.48  Aligned_cols=37  Identities=22%  Similarity=0.190  Sum_probs=32.0

Q ss_pred             CCceEEEE----c-CCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVI----G-QSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFm----G-Tp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++||++.    | ||.+|..+.++|+++||+|.++...+.+
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            34789999    6 5999999999999999999999987653

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=92.91  E-value=0.13  Score=42.63  Aligned_cols=35  Identities=11%  Similarity=0.239  Sum_probs=31.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||+++|.|.+|..+.+.|.++|++|+.|-..+++
T Consensus         1 m~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~   35 (453)
T PRK09496          1 MKIIIVGAGQVGYTLAENLSGENNDVTVIDTDEER   35 (453)
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence            68999999999999999999889999977666664

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=92.66  E-value=0.27  Score=39.70  Aligned_cols=34  Identities=21%  Similarity=0.277  Sum_probs=29.4

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +|||.|+|+|.+|..+-..|.++||+|...-+.+
T Consensus         4 ~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          4 PKTIAILGAGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4899999999999999999999999997665543

>PLN02583 cinnamoyl-CoA reductase

Probab=92.66  E-value=0.33  Score=38.36  Aligned_cols=34  Identities=18%  Similarity=0.086  Sum_probs=29.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +.+|++.|. |.+|..+.++|+++||+|++++..+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~   40 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN   40 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence            357888886 9999999999999999999998754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=92.64  E-value=0.25  Score=39.66  Aligned_cols=36  Identities=19%  Similarity=0.164  Sum_probs=31.4

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..|||++.|. |.+|..+.++|+++|++|+++...++
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~   45 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPA   45 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChH
Confidence            3489999996 99999999999999999999877654

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=92.64  E-value=0.3  Score=39.43  Aligned_cols=35  Identities=14%  Similarity=0.140  Sum_probs=30.9

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +.|||++.|. |-+|..+.++|+++|++|+++...+
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~   49 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS   49 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4589999996 9999999999999999999997644

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=92.60  E-value=0.4  Score=37.72  Aligned_cols=36  Identities=25%  Similarity=0.227  Sum_probs=31.4

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++|++.|. |.+|..+.++|+++||+|++++..+.+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTD   41 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            468999996 999999999999999999998887653

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=92.59  E-value=0.45  Score=30.91  Aligned_cols=33  Identities=27%  Similarity=0.261  Sum_probs=28.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ||+++|.|..|.++...|.+.|.+|.-+...+.
T Consensus         1 ~vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIGGGFIGIELAEALAELGKEVTLIERSDR   33 (80)
T ss_dssp             EEEEESSSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHhCcEEEEEeccch
Confidence            689999999999999999999999976555543

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PLN02214 cinnamoyl-CoA reductase

Probab=92.52  E-value=0.29  Score=39.61  Aligned_cols=36  Identities=28%  Similarity=0.338  Sum_probs=32.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            367999997 999999999999999999999887764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=92.52  E-value=0.22  Score=36.72  Aligned_cols=34  Identities=21%  Similarity=0.162  Sum_probs=30.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++|++.|. +.+|..+.+.|+++|++|+++.+.++
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~   41 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGD   41 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            57999996 99999999999999999999888754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=92.43  E-value=0.21  Score=37.76  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=30.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |+|++.|. +.+|..+.+.|+++|++|+++.+.+++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~   36 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER   36 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            67888886 999999999999999999998887653

>PRK08264 short chain dehydrogenase; Validated

Probab=92.41  E-value=0.35  Score=35.87  Aligned_cols=38  Identities=16%  Similarity=0.095  Sum_probs=32.2

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      ...+|++.|. +.+|..+.+.|+++|+ +|+.+.+.+++.
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~   44 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV   44 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh
Confidence            4467899985 9999999999999998 999888877654

>PRK12828 short chain dehydrogenase; Provisional

Probab=92.27  E-value=0.36  Score=35.24  Aligned_cols=36  Identities=17%  Similarity=0.105  Sum_probs=31.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+|++.|. +.+|..+.+.|+++|++|+++.+++++
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~   43 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAP   43 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHh
Confidence            457888987 999999999999999999999887654

>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed

Probab=92.19  E-value=0.14  Score=42.28  Aligned_cols=38  Identities=13%  Similarity=0.106  Sum_probs=28.9

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHH---hC---CCeEEEEEcCCCCC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLK---KN---GHSVVGVFTVVDKA   97 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl---~~---gheVvgVVTqPDKP   97 (124)
                      ..++|||++++||.  -..|++|+   ++   +++|++|+|+++..
T Consensus        86 ~~~~~ri~vl~Sg~--gsnl~al~~~~~~~~~~~~i~~visn~~~~  129 (286)
T PRK06027         86 SAERKRVVILVSKE--DHCLGDLLWRWRSGELPVEIAAVISNHDDL  129 (286)
T ss_pred             cccCcEEEEEEcCC--CCCHHHHHHHHHcCCCCcEEEEEEEcChhH
Confidence            34568999999987  45667777   44   47999999998744

>PRK07178 pyruvate carboxylase subunit A; Validated

Probab=92.18  E-value=0.32  Score=41.91  Aligned_cols=36  Identities=11%  Similarity=0.327  Sum_probs=33.9

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ||.++|.|++|.++++++.+.|+++++|.+.+|.+.
T Consensus         4 kvLi~~~geia~~ii~a~~~~Gi~~v~v~~~~d~~a   39 (472)
T PRK07178          4 KILIANRGEIAVRIVRACAEMGIRSVAIYSEADRHA   39 (472)
T ss_pred             EEEEECCcHHHHHHHHHHHHcCCeEEEEeCCCccCC
Confidence            799999999999999999999999999999999764

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=92.15  E-value=0.19  Score=40.48  Aligned_cols=32  Identities=25%  Similarity=0.459  Sum_probs=27.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |||.|+|.|..|.++.+.|++.||+|...-..
T Consensus         1 m~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~   32 (301)
T PRK09599          1 MQLGMIGLGRMGGNMARRLLRGGHEVVGYDRN   32 (301)
T ss_pred             CEEEEEcccHHHHHHHHHHHHCCCeEEEEECC
Confidence            68999999999999999999999998665333

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=92.09  E-value=0.29  Score=39.37  Aligned_cols=32  Identities=22%  Similarity=0.232  Sum_probs=29.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |||.|+|.|.+|..+-..|.++||+|..+-..
T Consensus         3 mkI~IiG~G~mG~~~A~~L~~~G~~V~~~~r~   34 (341)
T PRK08229          3 ARICVLGAGSIGCYLGGRLAAAGADVTLIGRA   34 (341)
T ss_pred             ceEEEECCCHHHHHHHHHHHhcCCcEEEEecH
Confidence            89999999999999999999999999987654

>PRK08463 acetyl-CoA carboxylase subunit A; Validated

Probab=92.06  E-value=0.36  Score=41.78  Aligned_cols=37  Identities=14%  Similarity=0.239  Sum_probs=34.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .||.++|.|++|.++++++.+.|+++++|.+.||.+.
T Consensus         3 kkiLi~~~ge~a~~~i~aa~~lG~~~v~v~~~~d~~~   39 (478)
T PRK08463          3 HKILIANRGEIAVRVIRACRDLHIKSVAIYTEPDREC   39 (478)
T ss_pred             cEEEEECCCHHHHHHHHHHHHcCCeEEEEECCCccCC
Confidence            5899999999999999999999999999999998753

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=92.03  E-value=0.33  Score=36.54  Aligned_cols=33  Identities=21%  Similarity=0.240  Sum_probs=29.4

Q ss_pred             EEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         64 VAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        64 IVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |+++|. |.+|..+++.|++.+|+|.+++..+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~   34 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS   34 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch
Confidence            677885 999999999999999999999998854

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=91.97  E-value=0.2  Score=40.45  Aligned_cols=34  Identities=29%  Similarity=0.492  Sum_probs=29.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||.|+|.|.+|..+...|.++||+|.+.=..++
T Consensus         1 M~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~   34 (298)
T TIGR00872         1 MQLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQD   34 (298)
T ss_pred             CEEEEEcchHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            6899999999999999999999999987655544

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07454 short chain dehydrogenase; Provisional

Probab=91.92  E-value=0.3  Score=36.41  Aligned_cols=37  Identities=19%  Similarity=0.211  Sum_probs=29.7

Q ss_pred             CCc-eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDL-RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~M-KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+| ++++.|. +.+|..+.++|+++|++|+.+..++++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~   42 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDA   42 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            334 5677776 999999999999999999988776653

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=91.87  E-value=0.35  Score=39.15  Aligned_cols=34  Identities=24%  Similarity=0.375  Sum_probs=29.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHh--CCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKK--NGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~--~gheVvgVVTq   93 (124)
                      ++|||+++|.|.+|..+.+.|.+  .++++++|...
T Consensus         5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr   40 (271)
T PRK13302          5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVR   40 (271)
T ss_pred             CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECC
Confidence            45999999999999999999876  36899888764

>PRK09072 short chain dehydrogenase; Provisional

Probab=91.82  E-value=0.31  Score=36.99  Aligned_cols=37  Identities=19%  Similarity=0.184  Sum_probs=30.8

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+..+|++.|. +.+|..+.+.|+++|++|+++...++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~   40 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAE   40 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence            34457888886 99999999999999999998887654

>PLN02206 UDP-glucuronate decarboxylase

Probab=91.73  E-value=0.47  Score=40.84  Aligned_cols=37  Identities=27%  Similarity=0.336  Sum_probs=31.7

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +..+.|||++.|. |.+|..+.++|+++||+|+++...
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~  152 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNF  152 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCC
Confidence            4445699999996 999999999999999999988543

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=91.71  E-value=0.28  Score=40.65  Aligned_cols=36  Identities=28%  Similarity=0.296  Sum_probs=32.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +++|+++|.|.+|..+.+.|.+.|++|+.|-..|++
T Consensus       231 ~~~iiIiG~G~~g~~l~~~L~~~~~~v~vid~~~~~  266 (453)
T PRK09496        231 VKRVMIVGGGNIGYYLAKLLEKEGYSVKLIERDPER  266 (453)
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            478999999999999999998889999999888775

>PRK07023 short chain dehydrogenase; Provisional

Probab=91.71  E-value=0.4  Score=35.87  Aligned_cols=35  Identities=26%  Similarity=0.365  Sum_probs=30.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |+|++.|. +.+|..+.+.|+++|++|+.+.+++++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~   37 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP   37 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence            68899888 999999999999999999998876653

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=91.66  E-value=0.33  Score=39.52  Aligned_cols=33  Identities=15%  Similarity=0.198  Sum_probs=28.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||.|+|.|..|.+....|++.||+|...-..|
T Consensus         1 m~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~   33 (292)
T PRK15059          1 MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGP   33 (292)
T ss_pred             CeEEEEccCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            589999999999999999999999987544433

>PRK06179 short chain dehydrogenase; Provisional

Probab=91.63  E-value=0.59  Score=35.51  Aligned_cols=41  Identities=20%  Similarity=0.111  Sum_probs=33.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKANREDI  102 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~~  102 (124)
                      .+|++.|. +.+|..+.++|.++|++|+++...+++....++
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~   46 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG   46 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCC
Confidence            46888886 999999999999999999999988776544333

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=91.58  E-value=0.35  Score=36.59  Aligned_cols=34  Identities=18%  Similarity=0.246  Sum_probs=29.3

Q ss_pred             EEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         64 VAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        64 IVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |++.|. |.+|..+.++|+++||+|.++.+.+++.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   35 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG   35 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence            356665 9999999999999999999999988764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK06138 short chain dehydrogenase; Provisional

Probab=91.56  E-value=0.37  Score=35.80  Aligned_cols=36  Identities=22%  Similarity=0.215  Sum_probs=30.8

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.+.|+++|++|+++.++++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~   40 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAE   40 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHH
Confidence            3457888888 99999999999999999998887765

>PRK06180 short chain dehydrogenase; Provisional

Probab=91.51  E-value=0.38  Score=37.15  Aligned_cols=35  Identities=23%  Similarity=0.278  Sum_probs=30.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.+.|+++|++|+++.+++++
T Consensus         5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~   40 (277)
T PRK06180          5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAA   40 (277)
T ss_pred             CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHH
Confidence            56888887 999999999999999999999887764

>PRK05875 short chain dehydrogenase; Provisional

Probab=91.38  E-value=0.39  Score=36.59  Aligned_cols=38  Identities=29%  Similarity=0.115  Sum_probs=31.8

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++..+|++.|. +.+|..+.+.|+++|++|+++..++++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~   43 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDK   43 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            34578999997 899999999999999999988776543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=91.26  E-value=0.28  Score=33.21  Aligned_cols=34  Identities=26%  Similarity=0.365  Sum_probs=28.6

Q ss_pred             EEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         64 VAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        64 IVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |+++|.+.+|..+++.|.+.+.+|+.|-..|++.
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~   34 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERV   34 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHH
Confidence            6889999999999999999666899998888653

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=91.02  E-value=0.39  Score=36.70  Aligned_cols=31  Identities=23%  Similarity=0.433  Sum_probs=27.4

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ||++.|. |.+|..+.++|+++||+|.++.+.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            5788885 999999999999999999988764

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=90.97  E-value=0.69  Score=35.35  Aligned_cols=25  Identities=24%  Similarity=0.361  Sum_probs=22.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNG   84 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~g   84 (124)
                      +.|||+|+|+|.+|..+...|++++
T Consensus         3 ~~~kI~iIG~G~mg~ala~~l~~~~   27 (245)
T PRK07634          3 KKHRILFIGAGRMAEAIFSGLLKTS   27 (245)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHhCC
Confidence            4689999999999999999998776

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=90.91  E-value=0.47  Score=39.91  Aligned_cols=37  Identities=16%  Similarity=0.289  Sum_probs=33.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .||.++|.|+.|.++++++.+.|++++++.+.+|.+.
T Consensus         3 k~iLi~g~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a   39 (451)
T PRK08591          3 DKILIANRGEIALRIIRACKELGIKTVAVHSTADRDA   39 (451)
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCeEEEEcChhhccC
Confidence            5899999999999999999999999999999888643

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=90.83  E-value=0.38  Score=38.82  Aligned_cols=33  Identities=18%  Similarity=0.192  Sum_probs=28.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||.++|.|.+|..+-..|.++||+|..+-+.+
T Consensus         1 MkI~IiGaGa~G~ala~~L~~~g~~V~l~~r~~   33 (326)
T PRK14620          1 MKISILGAGSFGTAIAIALSSKKISVNLWGRNH   33 (326)
T ss_pred             CEEEEECcCHHHHHHHHHHHHCCCeEEEEecCH
Confidence            689999999999999998988899998666544

>PRK07825 short chain dehydrogenase; Provisional

Probab=90.81  E-value=0.45  Score=36.31  Aligned_cols=37  Identities=16%  Similarity=-0.033  Sum_probs=31.0

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.++|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~   41 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEAL   41 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            3467888987 999999999999999999888776654

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=90.81  E-value=0.67  Score=34.83  Aligned_cols=31  Identities=29%  Similarity=0.234  Sum_probs=27.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEE
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgV   90 (124)
                      +..||+++|.|.+|..-++.|++.|++|+-|
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga~V~VI   42 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGAFVTVV   42 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEE
Confidence            3478999999999999999999999999855

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=90.67  E-value=0.34  Score=39.11  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=27.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||.|+|.|.+|.+..+.|+++||+|+..=..+
T Consensus         1 m~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~   33 (299)
T PRK12490          1 MKLGLIGLGKMGGNMAERLREDGHEVVGYDVNQ   33 (299)
T ss_pred             CEEEEEcccHHHHHHHHHHHhCCCEEEEEECCH
Confidence            689999999999999999999999987543333

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=90.64  E-value=0.69  Score=37.10  Aligned_cols=35  Identities=20%  Similarity=0.065  Sum_probs=30.4

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+||++.|. |.+|..+.+.|+++||+|+++...++
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~   39 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPP   39 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCc
Confidence            378999996 99999999999999999998876554

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07060 short chain dehydrogenase; Provisional

Probab=90.63  E-value=0.56  Score=34.70  Aligned_cols=36  Identities=22%  Similarity=0.198  Sum_probs=30.4

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.+++++.|. +.+|..+.+.|.++|++|+.+.+.+.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~   44 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAA   44 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3468899997 89999999999999999988876653

>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=90.60  E-value=0.56  Score=39.26  Aligned_cols=37  Identities=16%  Similarity=0.351  Sum_probs=33.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .||.++|.|..|.++++++.+.|++++++.+.+|.+.
T Consensus         3 ~~ililg~g~~~~~~~~~a~~lG~~~v~~~~~~~~~a   39 (450)
T PRK06111          3 QKVLIANRGEIAVRIIRTCQKLGIRTVAIYSEADRDA   39 (450)
T ss_pred             ceEEEECCcHHHHHHHHHHHHcCCeEEEEechhhccC
Confidence            5899999999999999999999999999998877654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=90.60  E-value=0.47  Score=37.93  Aligned_cols=34  Identities=18%  Similarity=0.236  Sum_probs=29.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      |||++.|. |.+|..+.++|+++ ||+|+++...++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~   37 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD   37 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH
Confidence            78999996 99999999999986 699999976543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=90.56  E-value=0.75  Score=33.59  Aligned_cols=34  Identities=18%  Similarity=0.333  Sum_probs=28.7

Q ss_pred             EEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         64 VAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        64 IVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |+++|. |-+|..+.++|+++||+|+++.+.++..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~   35 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSE   35 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGG
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccc
Confidence            577885 9999999999999999999777766644

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=90.54  E-value=0.72  Score=32.46  Aligned_cols=33  Identities=24%  Similarity=0.475  Sum_probs=29.1

Q ss_pred             eEEEEc-CCHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         63 RVAVIG-QSSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmG-Tp~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      ||+++| ||..|..+++.|.++ .++++.++...+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            799999 899999999998875 469999998887

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=90.48  E-value=0.61  Score=37.97  Aligned_cols=36  Identities=22%  Similarity=0.300  Sum_probs=32.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ||.++|++..|..+.+++.+.|++|+++-.+|+.|.
T Consensus         1 kililG~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~   36 (380)
T TIGR01142         1 RVLLLGSGELGKEVAIEAQRLGVEVIAVDRYANAPA   36 (380)
T ss_pred             CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCch
Confidence            689999999999999999999999999999888664

This enzyme is an alternative to PurN (TIGR00639)

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=90.43  E-value=0.43  Score=40.07  Aligned_cols=36  Identities=28%  Similarity=0.346  Sum_probs=33.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||+|+|.|..|.+.-..|+++||+|..--..|+|+
T Consensus         1 ~kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka   36 (286)
T COG2084           1 MKIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKA   36 (286)
T ss_pred             CeEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhh
Confidence            589999999999999999999999999988888874

>PRK06182 short chain dehydrogenase; Validated

Probab=90.41  E-value=0.5  Score=36.21  Aligned_cols=35  Identities=29%  Similarity=0.302  Sum_probs=30.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|+++||+|+++..++++
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~   39 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK   39 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            57888886 999999999999999999999887764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=90.37  E-value=0.62  Score=34.63  Aligned_cols=35  Identities=26%  Similarity=0.150  Sum_probs=30.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.+.|+++|++|+++.+.+++
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~   40 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEA   40 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            57889985 999999999999999999999887664

>PRK07102 short chain dehydrogenase; Provisional

Probab=90.36  E-value=0.46  Score=35.57  Aligned_cols=35  Identities=17%  Similarity=0.231  Sum_probs=30.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~   37 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVER   37 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence            57888886 999999999999999999999877653

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=90.24  E-value=0.64  Score=39.34  Aligned_cols=34  Identities=15%  Similarity=0.303  Sum_probs=28.9

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      +++||+++|+|.+|...+..+.+. +.++++|+-.
T Consensus         3 ~klrVAIIGtG~IGt~hm~~l~~~~~velvAVvdi   37 (302)
T PRK08300          3 SKLKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGI   37 (302)
T ss_pred             CCCeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            569999999999999988888864 5799998854

>PRK05586 biotin carboxylase; Validated

Probab=90.15  E-value=0.44  Score=40.49  Aligned_cols=36  Identities=17%  Similarity=0.368  Sum_probs=32.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .||.++|.|+.|.++++++.+.|+++++|.+.+|..
T Consensus         3 kkvli~g~G~~~~~~~~aa~~lG~~~v~v~~~~d~~   38 (447)
T PRK05586          3 KKILIANRGEIAVRIIRACREMGIETVAVYSEADKD   38 (447)
T ss_pred             ceEEEECCcHHHHHHHHHHHHcCCcEEEEcChHhcc
Confidence            489999999999999999999999999999887764

>PLN00093 geranylgeranyl diphosphate reductase; Provisional

Probab=90.11  E-value=1.7  Score=37.50  Aligned_cols=60  Identities=22%  Similarity=0.225  Sum_probs=46.7

Q ss_pred             eeeccccCceeEEecCCCCccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         36 VRTICHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        36 ~~~~c~~~~~~~~~~~s~~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +...|+..+....+..+.++ |+..++.|+++|.|.-|..+-..|.++|++|+-+=.+++.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~-~~~~~~DViIVGaGPAG~~aA~~LA~~G~~VlllEr~~~~   74 (450)
T PLN00093         15 AAKSVSRPGLRVLAAAASKK-LSGRKLRVAVIGGGPAGACAAETLAKGGIETFLIERKLDN   74 (450)
T ss_pred             cccccccccceeeecCCCCC-cCCCCCeEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence            34567777777776665555 7777899999999999998888888889998877666543

>PRK12829 short chain dehydrogenase; Provisional

Probab=90.09  E-value=0.68  Score=34.62  Aligned_cols=36  Identities=22%  Similarity=0.179  Sum_probs=31.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.++|++.|. +.+|..+.+.|+++||+|+.+...++
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~   46 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEA   46 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4478999998 99999999999999999988887653

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=90.08  E-value=0.4  Score=38.00  Aligned_cols=33  Identities=27%  Similarity=0.221  Sum_probs=28.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||.|+|.|..|..+.+.|.+.||+|.+.-.++
T Consensus         3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~   35 (296)
T PRK11559          3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNP   35 (296)
T ss_pred             ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            789999999999999999999999987654433

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=89.99  E-value=0.72  Score=34.65  Aligned_cols=39  Identities=15%  Similarity=0.083  Sum_probs=32.2

Q ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         58 HKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        58 ~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ....++|++.|. +.+|..+.+.|+++|++|+.+...+++
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~   47 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT   47 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence            334467888888 999999999999999999999887653

>PRK12939 short chain dehydrogenase; Provisional

Probab=89.94  E-value=0.68  Score=34.24  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=30.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++|++.|. +.+|..+.+.|+++|++|+++-..++
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~   42 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAA   42 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            467889987 99999999999999999988866555

>PRK05884 short chain dehydrogenase; Provisional

Probab=89.94  E-value=0.45  Score=35.96  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=30.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ||+++.|. +.+|..+.+.|.++|++|+.+..++++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~   36 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDD   36 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            57888886 999999999999999999998777654

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=89.88  E-value=0.58  Score=37.44  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=29.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +||.|+|.|.+|..+...|.+.||+|+++-..++
T Consensus         5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~   38 (311)
T PRK06130          5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEG   38 (311)
T ss_pred             cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            5899999999999999999998999988865543

>PRK12827 short chain dehydrogenase; Provisional

Probab=89.80  E-value=0.9  Score=33.47  Aligned_cols=33  Identities=18%  Similarity=0.230  Sum_probs=28.6

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      .|+|++.|. +.+|..+.++|+++||+|+.+...
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~   39 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIH   39 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCc
Confidence            478999997 999999999999999999887653

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=89.80  E-value=0.59  Score=39.67  Aligned_cols=35  Identities=17%  Similarity=0.353  Sum_probs=32.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ||.++|.|+.|.++++++.+.|++++++.+.+|..
T Consensus         4 kili~g~g~~~~~~~~aa~~lG~~vv~~~~~~d~~   38 (449)
T TIGR00514         4 KILIANRGEIALRILRACKELGIKTVAVHSTADRD   38 (449)
T ss_pred             eEEEeCCCHHHHHHHHHHHHcCCeEEEEEChhhhc
Confidence            89999999999999999999999999998877744

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]

Probab=89.68  E-value=0.67  Score=40.49  Aligned_cols=40  Identities=20%  Similarity=0.255  Sum_probs=33.7

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcCCCCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTVVDKANRE  100 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTqPDKP~g~  100 (124)
                      .|+++..|+|.+|...+++|+++ +.|++|++-..+.+.+.
T Consensus         2 ~~~vvqyGtG~vGv~air~l~akpe~elvgawv~s~ak~Gk   42 (350)
T COG3804           2 SLRVVQYGTGSVGVAAIRGLLAKPELELVGAWVHSAAKSGK   42 (350)
T ss_pred             CceeEEeccchHHHHHHHHHHcCCCCceEEEEecCcccccc
Confidence            38899999999999999999976 89999988777655443

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=89.67  E-value=0.55  Score=38.18  Aligned_cols=35  Identities=14%  Similarity=0.141  Sum_probs=30.7

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|||+++|.|.+|..+--.|.+.|++|..|...++
T Consensus         2 ~m~I~IiGaGaiG~~~a~~L~~~G~~V~lv~r~~~   36 (305)
T PRK05708          2 SMTWHILGAGSLGSLWACRLARAGLPVRLILRDRQ   36 (305)
T ss_pred             CceEEEECCCHHHHHHHHHHHhCCCCeEEEEechH
Confidence            48999999999999888888888999999988653

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.60  E-value=1  Score=33.46  Aligned_cols=33  Identities=21%  Similarity=0.365  Sum_probs=27.8

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      +..+|++.|. +.+|..+.+.|+++|++|+.+..
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~   37 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH   37 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence            3467889986 99999999999999999987654

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=89.53  E-value=0.6  Score=37.18  Aligned_cols=35  Identities=20%  Similarity=0.234  Sum_probs=30.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .||+|+|.|.+|..+-..|+.+||+|+.+-..+++
T Consensus         5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (292)
T PRK07530          5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADR   39 (292)
T ss_pred             CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            68999999999999999999999999988766543

>PLN02256 arogenate dehydrogenase

Probab=89.51  E-value=0.9  Score=37.63  Aligned_cols=34  Identities=24%  Similarity=0.442  Sum_probs=29.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ++|||+|+|.|.+|..+...|.+.|++|.++-..
T Consensus        35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~   68 (304)
T PLN02256         35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRS   68 (304)
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECc
Confidence            4589999999999999999998888999876544

>PRK09186 flagellin modification protein A; Provisional

Probab=89.47  E-value=0.88  Score=33.98  Aligned_cols=36  Identities=11%  Similarity=0.159  Sum_probs=30.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++|++.|. +.+|..+.+.|+++|++|+++..++++
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~   40 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEA   40 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHH
Confidence            367888887 899999999999999999998777654

>PRK04148 hypothetical protein; Provisional

Probab=89.47  E-value=0.51  Score=35.73  Aligned_cols=37  Identities=22%  Similarity=0.261  Sum_probs=31.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +.+||+.+|.| ||..+.+.|.+.||+|+||=..|+..
T Consensus        16 ~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV   52 (134)
T PRK04148         16 KNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAV   52 (134)
T ss_pred             cCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHH
Confidence            34889999999 88877788888899999999888843

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=89.40  E-value=0.8  Score=34.86  Aligned_cols=36  Identities=17%  Similarity=0.101  Sum_probs=29.4

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..++++.|. +.+|..+.+.|+++|++|+.+-...+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~   40 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAA   40 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3456788887 89999999999999999988766543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=89.34  E-value=0.91  Score=38.72  Aligned_cols=48  Identities=25%  Similarity=0.192  Sum_probs=35.3

Q ss_pred             eEEecCCCCccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         46 VFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        46 ~~~~~~s~~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++++++..-+.+  +.++|+|+|.|..|..+.+.|.+.|++|+.....+.
T Consensus         4 ~~~~~d~~~~~L--~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~   51 (330)
T PRK05479          4 VYYDKDADLSLI--KGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGS   51 (330)
T ss_pred             eeccCCCChhhh--CCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCch
Confidence            455555433333  347899999999999999999999999876555433

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=89.33  E-value=0.84  Score=36.71  Aligned_cols=33  Identities=30%  Similarity=0.386  Sum_probs=28.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTqP   94 (124)
                      |||+++|.|.+|..+++.|.+. +.++++|+..+
T Consensus         2 ~rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~   35 (265)
T PRK13303          2 MKVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPE   35 (265)
T ss_pred             cEEEEECCCHHHHHHHHHHhhCCCceEEEEEEcC
Confidence            8999999999999999998765 58999998543

>PRK06914 short chain dehydrogenase; Provisional

Probab=89.31  E-value=0.82  Score=34.93  Aligned_cols=34  Identities=26%  Similarity=0.253  Sum_probs=29.1

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .|++.|. +.+|..+.+.|+++||+|+++.+.+++
T Consensus         5 ~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~   39 (280)
T PRK06914          5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEK   39 (280)
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence            4677775 999999999999999999999887764

>PRK08654 pyruvate carboxylase subunit A; Validated

Probab=89.30  E-value=0.79  Score=40.37  Aligned_cols=37  Identities=19%  Similarity=0.346  Sum_probs=33.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .||.++|.|++|.++++++.+.|+++++|++.+|...
T Consensus         3 ~kvLIan~Geia~~iiraar~lGi~~V~v~s~~d~~a   39 (499)
T PRK08654          3 KKILIANRGEIAIRVMRACRELGIKTVAVYSEADKNA   39 (499)
T ss_pred             ceEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc
Confidence            4799999999999999999999999999999998643

>PRK08017 oxidoreductase; Provisional

Probab=89.26  E-value=0.72  Score=34.44  Aligned_cols=35  Identities=26%  Similarity=0.280  Sum_probs=30.6

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +|++.|. +.+|..+.+.|+++|++|+++...+++.
T Consensus         4 ~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~   39 (256)
T PRK08017          4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV   39 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh
Confidence            5888987 9999999999999999999888777654

>PRK06849 hypothetical protein; Provisional

Probab=89.25  E-value=1  Score=37.28  Aligned_cols=38  Identities=21%  Similarity=0.268  Sum_probs=32.5

Q ss_pred             CCceEEEEcCCH-HHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSS-FAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~-FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ++|||++.|.+. .|..+.+.|.+.||+|+++-+.++.+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~   41 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL   41 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            469999999954 79999999999999999998887643

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=89.21  E-value=0.98  Score=36.44  Aligned_cols=34  Identities=26%  Similarity=0.389  Sum_probs=29.7

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHh-CCCeEEEEEcCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKK-NGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~-~gheVvgVVTqPD   95 (124)
                      |||+++| +|.+|..+++.+.+ .++++++++-.++
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~   37 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHG   37 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence            7999999 79999999999886 4799999987554

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=89.14  E-value=0.91  Score=37.89  Aligned_cols=34  Identities=26%  Similarity=0.225  Sum_probs=29.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +..+|+++|.|.+|..+.+.|.++||+|+++-..
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~   37 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEK   37 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4578999999999999999999999999887544

>PRK07806 short chain dehydrogenase; Provisional

Probab=89.12  E-value=1.1  Score=33.49  Aligned_cols=34  Identities=24%  Similarity=0.269  Sum_probs=29.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.++|+++||+|+++..+.+
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~   41 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKA   41 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCch
Confidence            57888896 99999999999999999998876554

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.99  E-value=0.87  Score=33.50  Aligned_cols=34  Identities=24%  Similarity=0.215  Sum_probs=28.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEE-EcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGV-FTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgV-VTqPD   95 (124)
                      .+|++.|. +.+|..+.+.|+++|++|+.+ .+.++
T Consensus         6 ~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~   41 (247)
T PRK05565          6 KVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEE   41 (247)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            47899987 999999999999999999888 44443

>PRK07577 short chain dehydrogenase; Provisional

Probab=88.96  E-value=1.3  Score=32.60  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=30.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~   39 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID   39 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            56788887 999999999999999999999887765

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=88.96  E-value=0.61  Score=37.69  Aligned_cols=34  Identities=21%  Similarity=0.205  Sum_probs=28.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +||.|+|.|.+|......|++.||+|...=..++
T Consensus         2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~   35 (296)
T PRK15461          2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQ   35 (296)
T ss_pred             CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence            4899999999999999999999999876644444

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=88.89  E-value=0.65  Score=35.28  Aligned_cols=34  Identities=24%  Similarity=0.184  Sum_probs=29.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |++++.|. +.+|..+.+.|.++|++|+.+-.+++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~   35 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEE   35 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            67899997 99999999999999999988876654

>PRK02318 mannitol-1-phosphate 5-dehydrogenase; Provisional

Probab=88.88  E-value=0.57  Score=39.42  Aligned_cols=34  Identities=18%  Similarity=0.167  Sum_probs=28.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHh-CCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKK-NGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~-~gheVvgVVTqPD   95 (124)
                      |||+.+|.|.||.-.+..++. .|++|++|-..+.
T Consensus         1 mki~~~GaGa~gr~~~~~~l~~~g~~V~~vd~~~~   35 (381)
T PRK02318          1 MKAVHFGAGNIGRGFIGKLLADNGFEVTFVDVNQE   35 (381)
T ss_pred             CceEEECCchhhHHHHHHHHHhCCCeEEEEECCHH
Confidence            789999999999988877775 5799999976443

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=88.85  E-value=0.55  Score=36.58  Aligned_cols=33  Identities=15%  Similarity=0.224  Sum_probs=26.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC---CeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG---HSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g---heVvgVVTqP   94 (124)
                      |||.|+|.|.+|..+...|.++|   ++|..+-.++
T Consensus         3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~   38 (267)
T PRK11880          3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSP   38 (267)
T ss_pred             CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence            79999999999999999998877   5665554444

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=88.79  E-value=0.61  Score=37.31  Aligned_cols=29  Identities=21%  Similarity=0.471  Sum_probs=26.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEE
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgV   90 (124)
                      |||.++|. |.+|..+.+.|.++|++|+++
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~   30 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIAT   30 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEe
Confidence            89999995 999999999998888999988

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=88.74  E-value=1.4  Score=35.15  Aligned_cols=44  Identities=23%  Similarity=0.277  Sum_probs=35.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCcc
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIV  103 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~~l  103 (124)
                      +.+||++.|.|.+|..+.+.|.+.|..|++|.-..--...++++
T Consensus        30 ~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gl   73 (227)
T cd01076          30 AGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGL   73 (227)
T ss_pred             cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCC
Confidence            45899999999999999999999999999997654333344444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PLN02778 3,5-epimerase/4-reductase

Probab=88.72  E-value=0.96  Score=36.23  Aligned_cols=31  Identities=16%  Similarity=0.169  Sum_probs=27.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEE
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgV   90 (124)
                      .+|||++.|. |.+|..+.+.|+++||+|+..
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~   39 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG   39 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence            3489999997 999999999999999998753

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=88.72  E-value=1.1  Score=37.33  Aligned_cols=35  Identities=17%  Similarity=0.314  Sum_probs=29.0

Q ss_pred             CceEEEEc-CCHHHHHHHHHHHhCC-CeEEEEEcCCC
Q psy16773         61 DLRVAVIG-QSSFAAEVYKLLKKNG-HSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmG-Tp~FAa~iLeeLl~~g-heVvgVVTqPD   95 (124)
                      ++||+++| ||.+|..+++.|.++. .+++++++.+.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~   39 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER   39 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence            48999998 6999999999888754 49999966654

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=88.58  E-value=0.61  Score=37.70  Aligned_cols=34  Identities=21%  Similarity=0.111  Sum_probs=30.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|+|.|.+|..+-..|.++||+|+++-..++
T Consensus         3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            6899999999999999999999999998876654

>PRK09134 short chain dehydrogenase; Provisional

Probab=88.58  E-value=1.5  Score=33.19  Aligned_cols=34  Identities=15%  Similarity=0.135  Sum_probs=28.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ..+++++.|. +.+|..+.+.|.++|++|+.+..+
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~   42 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNR   42 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3467888888 999999999999999999877654

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=88.57  E-value=0.49  Score=37.59  Aligned_cols=33  Identities=18%  Similarity=0.143  Sum_probs=28.3

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ||.|+|.|..|..+.+.|.+.||+|.++=.+++
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~   33 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPE   33 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence            589999999999999999999999987655543

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=88.49  E-value=1  Score=35.93  Aligned_cols=33  Identities=15%  Similarity=0.185  Sum_probs=29.0

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|++.|. |-+|..+.++|+++||+|+++...++
T Consensus         2 ~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         2 IALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             eEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            6788886 99999999999999999999887664

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK12320 hypothetical protein; Provisional

Probab=88.44  E-value=0.83  Score=42.60  Aligned_cols=34  Identities=21%  Similarity=0.346  Sum_probs=30.4

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||++.| +|.+|..+.++|+++||+|+++...+.
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~   35 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH   35 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            6899999 599999999999999999999887654

>PRK06172 short chain dehydrogenase; Provisional

Probab=88.38  E-value=0.99  Score=33.85  Aligned_cols=36  Identities=14%  Similarity=0.058  Sum_probs=30.8

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+|++.|. +.+|..+.+.|+++|++|+.+.+.+++
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~   43 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAG   43 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            357888887 999999999999999999998877653

>PRK08507 prephenate dehydrogenase; Validated

Probab=88.35  E-value=0.63  Score=36.88  Aligned_cols=33  Identities=21%  Similarity=0.302  Sum_probs=26.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqP   94 (124)
                      |||+|+|.|.+|..+...|.+.|+  +|.++-..+
T Consensus         1 m~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~   35 (275)
T PRK08507          1 MKIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNE   35 (275)
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCH
Confidence            689999999999999999998885  666654433

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=88.33  E-value=0.7  Score=36.18  Aligned_cols=27  Identities=15%  Similarity=0.279  Sum_probs=23.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVV   88 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVv   88 (124)
                      |||.|+|.|.+|..+.+.|++.|+++.
T Consensus         1 m~IgiIG~G~mG~aia~~L~~~g~~~~   27 (258)
T PRK06476          1 MKIGFIGTGAITEAMVTGLLTSPADVS   27 (258)
T ss_pred             CeEEEECcCHHHHHHHHHHHhCCCChh
Confidence            689999999999999999998887653

>PRK09135 pteridine reductase; Provisional

Probab=88.30  E-value=1.3  Score=32.54  Aligned_cols=33  Identities=15%  Similarity=0.167  Sum_probs=29.1

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ..+|++.|. +.+|..+.+.|+++|++|+++...
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~   39 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHR   39 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            367888997 999999999999999999998865

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=88.30  E-value=1.4  Score=32.90  Aligned_cols=34  Identities=18%  Similarity=0.178  Sum_probs=28.9

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+++...+
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~   39 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE   39 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch
Confidence            357888887 8999999999999999998887643

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=88.28  E-value=0.53  Score=40.25  Aligned_cols=35  Identities=14%  Similarity=0.267  Sum_probs=30.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||.++|.|-.|.++-..+ ..||+|+++=..+++.
T Consensus         1 mkI~VIGlGyvGl~~A~~l-A~G~~VigvD~d~~kv   35 (388)
T PRK15057          1 MKITISGTGYVGLSNGLLI-AQNHEVVALDILPSRV   35 (388)
T ss_pred             CEEEEECCCHHHHHHHHHH-HhCCcEEEEECCHHHH
Confidence            6899999999999988544 4599999999998876

>PLN02686 cinnamoyl-CoA reductase

Probab=88.25  E-value=0.89  Score=37.49  Aligned_cols=36  Identities=22%  Similarity=0.153  Sum_probs=30.7

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.++|++.|. |.+|..+.+.|+++||+|++++..++
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~   88 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQE   88 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3468999987 99999999999999999998876543

>PRK07890 short chain dehydrogenase; Provisional

Probab=88.25  E-value=0.89  Score=34.01  Aligned_cols=36  Identities=17%  Similarity=0.110  Sum_probs=30.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++|++.|. +.+|..+.+.|+++|++|+.+-..++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~   40 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAE   40 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            3467888887 99999999999999999988876654

>PRK05866 short chain dehydrogenase; Provisional

Probab=88.23  E-value=1.1  Score=35.51  Aligned_cols=40  Identities=20%  Similarity=0.281  Sum_probs=32.7

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |..+..+|++.|. +.+|..+.++|+++|++|+.+..++++
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~   76 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDL   76 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            3444467888887 999999999999999999998877653

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=88.22  E-value=1.1  Score=35.57  Aligned_cols=35  Identities=14%  Similarity=0.160  Sum_probs=30.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++|++.|. |.+|..+.++|+++|++|+++...++
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            478999996 99999999999999999999876654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=88.12  E-value=1.2  Score=33.31  Aligned_cols=34  Identities=24%  Similarity=0.175  Sum_probs=29.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.+.|+++|++|+.+...++
T Consensus         8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~   42 (262)
T PRK13394          8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQD   42 (262)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChH
Confidence            56888888 99999999999999999998877664

>PRK08219 short chain dehydrogenase; Provisional

Probab=88.11  E-value=0.75  Score=33.51  Aligned_cols=34  Identities=12%  Similarity=0.153  Sum_probs=29.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.++|+++ |+|+++..++++
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~   38 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAER   38 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHH
Confidence            57888887 99999999999998 999999877643

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.11  E-value=1.6  Score=32.28  Aligned_cols=35  Identities=20%  Similarity=0.184  Sum_probs=29.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++++.|. +.+|..+.+.|+++|++|+.+-..++.
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~   41 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP   41 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            56778886 999999999999999999888776543

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=88.05  E-value=0.97  Score=36.29  Aligned_cols=32  Identities=13%  Similarity=0.340  Sum_probs=27.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTq   93 (124)
                      |||+++|.|.+|..+.+.|.+.  ++++++|+..
T Consensus         2 mrIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~   35 (265)
T PRK13304          2 LKIGIVGCGAIASLITKAILSGRINAELYAFYDR   35 (265)
T ss_pred             CEEEEECccHHHHHHHHHHHcCCCCeEEEEEECC
Confidence            8999999999999999998875  4788887643

>PRK07856 short chain dehydrogenase; Provisional

Probab=88.05  E-value=1.4  Score=33.27  Aligned_cols=37  Identities=19%  Similarity=0.136  Sum_probs=30.9

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +..++++.|. +.+|..+.+.|+++|++|+.+...+++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~   42 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            3467888887 899999999999999999988877654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=88.05  E-value=1.5  Score=32.63  Aligned_cols=34  Identities=21%  Similarity=0.204  Sum_probs=29.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      .+++++.|. +.+|..+.+.|+++|++|+++...+
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~   42 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF   42 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence            357888887 8999999999999999999998766

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=88.02  E-value=0.73  Score=41.08  Aligned_cols=36  Identities=28%  Similarity=0.279  Sum_probs=32.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||.++|||-.|.-.---|.+.||||++|=-.+.|.
T Consensus         1 MkI~viGtGYVGLv~g~~lA~~GHeVv~vDid~~KV   36 (414)
T COG1004           1 MKITVIGTGYVGLVTGACLAELGHEVVCVDIDESKV   36 (414)
T ss_pred             CceEEECCchHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence            899999999999987766777899999999888876

>PRK07478 short chain dehydrogenase; Provisional

Probab=87.92  E-value=1.1  Score=33.72  Aligned_cols=35  Identities=20%  Similarity=0.182  Sum_probs=29.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+.+.+++
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~   42 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE   42 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            46888887 899999999999999999888776543

>PRK07774 short chain dehydrogenase; Provisional

Probab=87.92  E-value=1.2  Score=33.09  Aligned_cols=35  Identities=23%  Similarity=0.213  Sum_probs=30.1

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+++++.|. +.+|..+.+.|+++|++|+.+-..++
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~   41 (250)
T PRK07774          6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAE   41 (250)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            367899998 99999999999999999998876653

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=87.84  E-value=1.3  Score=34.58  Aligned_cols=31  Identities=26%  Similarity=0.347  Sum_probs=27.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEE
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgV   90 (124)
                      +..||+++|.|++|...++.|++.|++|+-|
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VI   39 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVI   39 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence            3468999999999999999999999988755

>PRK09291 short chain dehydrogenase; Provisional

Probab=87.83  E-value=0.83  Score=34.13  Aligned_cols=33  Identities=27%  Similarity=0.481  Sum_probs=29.0

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|++.|. +.+|..+.+.|+++|++|+++...++
T Consensus         4 ~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~   37 (257)
T PRK09291          4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAP   37 (257)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            6888887 99999999999999999999887654

>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A

Probab=87.82  E-value=1.3  Score=32.18  Aligned_cols=35  Identities=31%  Similarity=0.277  Sum_probs=28.2

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .-+|+++|+|.-|..++.+|.+.|-+|..+.+.|.
T Consensus       167 ~k~V~VVG~G~SA~d~a~~l~~~g~~V~~~~R~~~  201 (203)
T PF13738_consen  167 GKRVVVVGGGNSAVDIAYALAKAGKSVTLVTRSPI  201 (203)
T ss_dssp             TSEEEEE--SHHHHHHHHHHTTTCSEEEEEESS--
T ss_pred             CCcEEEEcChHHHHHHHHHHHhhCCEEEEEecCCC
Confidence            46899999999999999999998888999888875

...

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.80  E-value=1.1  Score=33.00  Aligned_cols=34  Identities=24%  Similarity=0.190  Sum_probs=29.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.+.|+++|++|+++...++
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~   40 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNEN   40 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            47888887 89999999999999999999887665

>PRK08177 short chain dehydrogenase; Provisional

Probab=87.78  E-value=1.6  Score=32.51  Aligned_cols=36  Identities=14%  Similarity=0.186  Sum_probs=30.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .++++.|. +.+|..+.+.|.++|++|+++-..+++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~   38 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQD   38 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence            35778885 9999999999999999999998887654

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=87.55  E-value=1.1  Score=36.77  Aligned_cols=37  Identities=24%  Similarity=0.245  Sum_probs=30.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDKP~   98 (124)
                      |||+++|+|.+|..+...|..+|  ++|+.+=..+++..
T Consensus         1 mkI~IIGaG~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~   39 (308)
T cd05292           1 MKVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAE   39 (308)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCCEEEEEECCchhhh
Confidence            68999999999999999988888  57777766666553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02712 arogenate dehydrogenase

Probab=87.51  E-value=1.2  Score=40.87  Aligned_cols=35  Identities=26%  Similarity=0.426  Sum_probs=29.8

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ..+|||+|+|.|.+|..+.+.|.+.|++|+++-..
T Consensus        50 ~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~   84 (667)
T PLN02712         50 TTQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRS   84 (667)
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34589999999999999999999889999876543

>PRK08628 short chain dehydrogenase; Provisional

Probab=87.50  E-value=1.4  Score=33.14  Aligned_cols=37  Identities=24%  Similarity=0.116  Sum_probs=30.4

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +..+|++.|. +.+|..+.+.|+++|++|+.+...+++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~   43 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD   43 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhh
Confidence            4457888886 899999999999999999887766654

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=87.48  E-value=0.86  Score=37.18  Aligned_cols=34  Identities=24%  Similarity=0.291  Sum_probs=28.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |+|+++|+|++|..+-..+...||||+=--+..+
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~   35 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGP   35 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCCh
Confidence            8899999999999999899999999865544443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=87.28  E-value=1  Score=36.54  Aligned_cols=36  Identities=25%  Similarity=0.329  Sum_probs=31.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      -||+++|.|..|..+-..++..||+|+.+-..|++-
T Consensus         6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819          6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            389999999999999999999999999988877753

>PRK08309 short chain dehydrogenase; Provisional

Probab=87.25  E-value=0.94  Score=34.60  Aligned_cols=35  Identities=23%  Similarity=0.210  Sum_probs=28.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |++++.|...|+..+.+.|.++||+|..+...+++
T Consensus         1 m~vlVtGGtG~gg~la~~L~~~G~~V~v~~R~~~~   35 (177)
T PRK08309          1 MHALVIGGTGMLKRVSLWLCEKGFHVSVIARREVK   35 (177)
T ss_pred             CEEEEECcCHHHHHHHHHHHHCcCEEEEEECCHHH
Confidence            67888998778888889999999999887665543

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=87.23  E-value=1.2  Score=39.89  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=30.8

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      .|||++.|. |.+|..+.++|+++ ||+|+++...++
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~  351 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSD  351 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCch
Confidence            489999996 99999999999985 799999987665

>PLN02712 arogenate dehydrogenase

Probab=87.14  E-value=1.1  Score=41.08  Aligned_cols=34  Identities=26%  Similarity=0.480  Sum_probs=29.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ++|||+|+|.|.+|..+.+.|.+.|++|+++-..
T Consensus       368 ~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~  401 (667)
T PLN02712        368 SKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRS  401 (667)
T ss_pred             CCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECC
Confidence            4589999999999999999998889999866544

>PRK07814 short chain dehydrogenase; Provisional

Probab=87.14  E-value=1.2  Score=34.00  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=30.1

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+++++.|. +.+|..+.+.|+++|++|+.+.+.++
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~   45 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTES   45 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            467888888 88999999999999999998887664

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=87.13  E-value=1.8  Score=34.65  Aligned_cols=33  Identities=18%  Similarity=0.300  Sum_probs=27.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqP   94 (124)
                      |||+++|. |.+|..+++.+.+. ++++++++-..
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~   36 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRP   36 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            89999997 99999999888764 68999987543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=87.10  E-value=1.1  Score=34.81  Aligned_cols=34  Identities=18%  Similarity=0.104  Sum_probs=29.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +.++|++.|.|.+|..+.+.|.+.|++|++.-.+
T Consensus        27 ~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~   60 (200)
T cd01075          27 EGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADIN   60 (200)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            4578999999999999999999999999854333

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=87.06  E-value=1.4  Score=36.07  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=29.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||+++|. ++ |..+.+.|.++||+|++.++.+...
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~   36 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK   36 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc
Confidence            67887776 66 9999999999999999999888654

This enzyme was found to be a monomer by gel filtration.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=87.03  E-value=1  Score=33.66  Aligned_cols=36  Identities=22%  Similarity=0.230  Sum_probs=29.9

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.++++++| +|.+|..+.+.|.++|++|..+-..++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~   63 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLE   63 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            447899998 599999999999988999988766554

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=87.02  E-value=1.3  Score=33.61  Aligned_cols=34  Identities=12%  Similarity=0.123  Sum_probs=29.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.+.|+++|++|+.+-.+++
T Consensus         7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~   41 (263)
T PRK06200          7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAE   41 (263)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            56888887 89999999999999999988876654

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=86.98  E-value=0.67  Score=34.11  Aligned_cols=33  Identities=30%  Similarity=0.413  Sum_probs=28.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ||+++|+|.+|..+-..|.++||+|..--+.++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~   33 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEE   33 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHH
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHH
Confidence            799999999999888888889999887766553

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=86.90  E-value=1.4  Score=35.28  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=28.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC----CeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG----HSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g----heVvgVVTqP   94 (124)
                      |||.|+|.|.+|..+...|.++|    ++|.++...+
T Consensus         2 ~~I~iIG~G~mG~ala~~L~~~g~~~~~~V~~~~r~~   38 (277)
T PRK06928          2 EKIGFIGYGSMADMIATKLLETEVATPEEIILYSSSK   38 (277)
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCCCcccEEEEeCCc
Confidence            68999999999999999999877    7888776543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=86.85  E-value=1.3  Score=33.31  Aligned_cols=34  Identities=18%  Similarity=0.077  Sum_probs=29.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.+.|+++|++|+.+-..++
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~   45 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPA   45 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            47888887 99999999999999999988766554

>PRK06949 short chain dehydrogenase; Provisional

Probab=86.75  E-value=1.2  Score=33.23  Aligned_cols=36  Identities=25%  Similarity=0.281  Sum_probs=31.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++|++.|. +.+|..+.+.|.++|++|+++..++++
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~   45 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVER   45 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            367888887 999999999999999999999887654

>PRK06523 short chain dehydrogenase; Provisional

Probab=86.71  E-value=1.9  Score=32.41  Aligned_cols=37  Identities=22%  Similarity=0.179  Sum_probs=31.0

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.++|++.|. +.+|..+.+.|.++|++|+++...+++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~   45 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD   45 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh
Confidence            3467888886 899999999999999999988876553

>PRK05867 short chain dehydrogenase; Provisional

Probab=86.62  E-value=1.4  Score=33.20  Aligned_cols=35  Identities=17%  Similarity=0.174  Sum_probs=29.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++++.|. +.+|..+.+.|+++|++|+.+..+++
T Consensus         9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~   44 (253)
T PRK05867          9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLD   44 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            356888887 99999999999999999988877654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=86.52  E-value=1.3  Score=31.22  Aligned_cols=37  Identities=24%  Similarity=0.255  Sum_probs=29.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCC-CeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNG-HSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~g-heVvgVVTqPDK   96 (124)
                      +..||+++|.|..|..+.+.|.+.| ++|..+-.++++
T Consensus        18 ~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~   55 (155)
T cd01065          18 KGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEK   55 (155)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHH
Confidence            3478999999999999999998875 667666555443

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=86.51  E-value=2.1  Score=32.34  Aligned_cols=35  Identities=9%  Similarity=0.176  Sum_probs=28.9

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +.+++++.|. +.+|..+.+.|.++|++|+.+....
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~   41 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA   41 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence            3467888886 9999999999999999998765543

>PRK06841 short chain dehydrogenase; Provisional

Probab=86.51  E-value=1.9  Score=32.23  Aligned_cols=36  Identities=19%  Similarity=0.184  Sum_probs=30.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.+.|+++|++|+.+.+.++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~   50 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED   50 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3457888886 99999999999999999988776554

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=86.46  E-value=1.5  Score=32.31  Aligned_cols=35  Identities=11%  Similarity=0.198  Sum_probs=29.8

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++++.|. +.+|..+.+.|+++|++|+.+...++
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~   40 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQE   40 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            457889997 99999999999999999988876654

>PRK05993 short chain dehydrogenase; Provisional

Probab=86.37  E-value=1.6  Score=33.77  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=30.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|.++|++|+++..++++
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~   40 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEED   40 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            36788887 999999999999999999999887764

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=86.31  E-value=0.97  Score=39.50  Aligned_cols=35  Identities=14%  Similarity=0.075  Sum_probs=29.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||+|+|+|.+|..+...|+.+||+|...=..|++
T Consensus         5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~   39 (495)
T PRK07531          5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEA   39 (495)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            68999999999999999999999999766555443

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=86.27  E-value=1.7  Score=30.21  Aligned_cols=32  Identities=25%  Similarity=0.468  Sum_probs=26.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVV   94 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqP   94 (124)
                      ||+++|+ +..|..+++.|.+. ++++++|++.+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~   34 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASA   34 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEech
Confidence            6899995 88999999988874 78999997754

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK08703 short chain dehydrogenase; Provisional

Probab=86.25  E-value=1.6  Score=32.55  Aligned_cols=35  Identities=23%  Similarity=0.251  Sum_probs=30.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.+.|+++|++|+.+-..+++
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~   42 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKK   42 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHH
Confidence            57888887 999999999999999999988877753

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=86.14  E-value=0.94  Score=39.18  Aligned_cols=36  Identities=19%  Similarity=0.280  Sum_probs=31.8

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .|||.|+|.|..|.+.-..|.+ +|+|+++=..+++.
T Consensus         6 ~mkI~vIGlGyvGlpmA~~la~-~~~V~g~D~~~~~v   41 (425)
T PRK15182          6 EVKIAIIGLGYVGLPLAVEFGK-SRQVVGFDVNKKRI   41 (425)
T ss_pred             CCeEEEECcCcchHHHHHHHhc-CCEEEEEeCCHHHH
Confidence            4899999999999999888665 69999999988875

>PLN02572 UDP-sulfoquinovose synthase

Probab=86.12  E-value=1.5  Score=37.55  Aligned_cols=32  Identities=28%  Similarity=0.132  Sum_probs=28.4

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEE
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +.|||++.|. |.+|..+.+.|+++||+|+++-
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d   78 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVD   78 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe
Confidence            3478999997 9999999999999999999874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=86.04  E-value=1.6  Score=32.46  Aligned_cols=34  Identities=18%  Similarity=0.139  Sum_probs=29.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.+.|+++|++|+.+...++
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~   42 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEE   42 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46888887 89999999999999999998877654

>PRK08278 short chain dehydrogenase; Provisional

Probab=86.03  E-value=2.5  Score=32.77  Aligned_cols=36  Identities=8%  Similarity=0.145  Sum_probs=30.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++++.|. +.+|..+.+.|+++|++|+.+....++
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   42 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEP   42 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccccc
Confidence            346888887 999999999999999999888776553

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=85.98  E-value=1.3  Score=35.33  Aligned_cols=35  Identities=17%  Similarity=0.193  Sum_probs=30.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .||+|+|.|..|..+...|+..|++|.++-.++++
T Consensus         5 ~~V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~   39 (295)
T PLN02545          5 KKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAA   39 (295)
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            47999999999999999999999999988766654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=85.91  E-value=1.7  Score=31.96  Aligned_cols=35  Identities=26%  Similarity=0.251  Sum_probs=28.3

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++++.|. +.+|..+.++|+++|+.|+....+++
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~   41 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVE   41 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            357888886 99999999999999998776655554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=85.85  E-value=2.6  Score=31.94  Aligned_cols=38  Identities=24%  Similarity=0.170  Sum_probs=31.2

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +..++++.|. +.+|..+.+.|+++|++|+.+-..+++.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~   46 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG   46 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc
Confidence            3456788886 9999999999999999999887776654

>PRK06114 short chain dehydrogenase; Provisional

Probab=85.85  E-value=2.9  Score=31.65  Aligned_cols=36  Identities=19%  Similarity=0.060  Sum_probs=28.8

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +...+++.|. +.+|..+.+.|.++|++|+.+....+
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~   43 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD   43 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            3346777887 89999999999999999987766543

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=85.84  E-value=1.3  Score=36.71  Aligned_cols=33  Identities=18%  Similarity=0.340  Sum_probs=29.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||.++|+|.+|....-.|.+.|++|..+...+
T Consensus         1 mkI~IlGaGAvG~l~g~~L~~~g~~V~~~~R~~   33 (307)
T COG1893           1 MKILILGAGAIGSLLGARLAKAGHDVTLLVRSR   33 (307)
T ss_pred             CeEEEECCcHHHHHHHHHHHhCCCeEEEEecHH
Confidence            799999999999999999998887777777666

>PTZ00431 pyrroline carboxylate reductase; Provisional

Probab=85.77  E-value=1.8  Score=34.29  Aligned_cols=34  Identities=12%  Similarity=0.179  Sum_probs=26.4

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCC----CeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNG----HSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~g----heVvgVVTqP   94 (124)
                      .|||.|+|.|..|..++..|++.+    .+|.+.-.++
T Consensus         3 ~mkI~iIG~G~mG~ai~~~l~~~~~~~~~~i~~~~~~~   40 (260)
T PTZ00431          3 NIRVGFIGLGKMGSALAYGIENSNIIGKENIYYHTPSK   40 (260)
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCCCCcceEEEECCCh
Confidence            489999999999999999999865    2365554333

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=85.62  E-value=1.4  Score=33.04  Aligned_cols=35  Identities=17%  Similarity=0.204  Sum_probs=30.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus        12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~   47 (247)
T PRK08945         12 DRIILVTGAGDGIGREAALTYARHGATVILLGRTEE   47 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHH
Confidence            356888877 99999999999999999999888764

>PRK06924 short chain dehydrogenase; Provisional

Probab=85.59  E-value=2  Score=32.08  Aligned_cols=32  Identities=16%  Similarity=0.295  Sum_probs=28.1

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +|++.|. +.+|..+.++|+++|++|+.+...+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~   35 (251)
T PRK06924          3 YVIITGTSQGLGEAIANQLLEKGTHVISISRTE   35 (251)
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence            5788886 9999999999999999999887766

>PRK07680 late competence protein ComER; Validated

Probab=85.53  E-value=1  Score=35.67  Aligned_cols=24  Identities=13%  Similarity=0.385  Sum_probs=21.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH   85 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh   85 (124)
                      |||.|+|.|..|..+...|.+.|+
T Consensus         1 m~I~iIG~G~mG~ala~~L~~~g~   24 (273)
T PRK07680          1 MNIGFIGTGNMGTILIEAFLESGA   24 (273)
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC
Confidence            689999999999999999998873

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=85.47  E-value=1.5  Score=32.59  Aligned_cols=35  Identities=11%  Similarity=0.101  Sum_probs=29.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~   39 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREA   39 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH
Confidence            56888886 999999999999999999888776653

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=85.43  E-value=1.7  Score=36.35  Aligned_cols=31  Identities=26%  Similarity=0.239  Sum_probs=26.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      .+||+|+|.|..|..+.+.|.+.|++|+...
T Consensus         3 ~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~   33 (314)
T TIGR00465         3 GKTVAIIGYGSQGHAQALNLRDSGLNVIVGL   33 (314)
T ss_pred             cCEEEEEeEcHHHHHHHHHHHHCCCeEEEEE
Confidence            4789999999999999999999998875443

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=85.41  E-value=2.3  Score=36.50  Aligned_cols=39  Identities=21%  Similarity=0.245  Sum_probs=31.5

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCC-------CeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNG-------HSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~g-------heVvgVVTqPD   95 (124)
                      +..++|||.++|+|.||..+-..|.+++       |+|..-...++
T Consensus         7 ~~~~~~ki~ViGaG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~   52 (365)
T PTZ00345          7 LRCGPLKVSVIGSGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEI   52 (365)
T ss_pred             cccCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEeccc
Confidence            4456799999999999999988888776       78877766664

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=85.41  E-value=1.2  Score=35.60  Aligned_cols=35  Identities=14%  Similarity=0.218  Sum_probs=30.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      -||+++|.|.+|..+...|..+|++|+.+-..+++
T Consensus         4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (291)
T PRK06035          4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEI   38 (291)
T ss_pred             cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            36999999999999999999999999988766654

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=85.36  E-value=1.5  Score=40.34  Aligned_cols=36  Identities=19%  Similarity=0.132  Sum_probs=31.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ..|++.|. |.+|..+.++|+++||+|+++..++++.
T Consensus        81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl  117 (576)
T PLN03209         81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRA  117 (576)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            45778887 9999999999999999999999887754

>PRK06057 short chain dehydrogenase; Provisional

Probab=85.33  E-value=1.8  Score=32.69  Aligned_cols=35  Identities=17%  Similarity=0.092  Sum_probs=30.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~   43 (255)
T PRK06057          8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA   43 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            57889998 999999999999999999988776653

>PLN02828 formyltetrahydrofolate deformylase

Probab=85.29  E-value=2.3  Score=35.38  Aligned_cols=37  Identities=11%  Similarity=0.148  Sum_probs=25.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHh---C---CCeEEEEEcCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKK---N---GHSVVGVFTVVDKAN   98 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~---~---gheVvgVVTqPDKP~   98 (124)
                      +++||++|.|+. | -+|++|++   .   ..||++|+|++|+|.
T Consensus        69 ~~~riavlvSg~-g-~nl~~ll~~~~~g~l~~eI~~ViSn~~~~~  111 (268)
T PLN02828         69 PKYKIAVLASKQ-D-HCLIDLLHRWQDGRLPVDITCVISNHERGP  111 (268)
T ss_pred             CCcEEEEEEcCC-C-hhHHHHHHhhhcCCCCceEEEEEeCCCCCC
Confidence            458999998843 1 24444443   2   369999999998763

>PRK08655 prephenate dehydrogenase; Provisional

Probab=85.27  E-value=1.4  Score=38.05  Aligned_cols=35  Identities=20%  Similarity=0.357  Sum_probs=30.0

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||+|+| +|.+|..+...|.++|++|.++-..+++
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            6899998 7999999999999889999887766554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=85.09  E-value=1.9  Score=32.99  Aligned_cols=36  Identities=14%  Similarity=0.101  Sum_probs=29.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +...+++.|. +.+|..+.+.|+++|++|+.+..+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~   45 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQE   45 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3456788887 99999999999999999988877654

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=85.05  E-value=1.1  Score=36.22  Aligned_cols=24  Identities=8%  Similarity=0.138  Sum_probs=22.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH   85 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh   85 (124)
                      |||.|+|.|..|..+...|+++|+
T Consensus         3 ~~IgfIG~G~MG~aia~~L~~~g~   26 (272)
T PRK12491          3 KQIGFIGCGNMGIAMIGGMINKNI   26 (272)
T ss_pred             CeEEEECccHHHHHHHHHHHHCCC
Confidence            689999999999999999998775

>PRK07035 short chain dehydrogenase; Provisional

Probab=84.95  E-value=1.9  Score=32.28  Aligned_cols=34  Identities=24%  Similarity=0.284  Sum_probs=29.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.++|.++|++|+++.++++
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~   43 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLD   43 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            45778886 99999999999999999999987654

>PRK06500 short chain dehydrogenase; Provisional

Probab=84.93  E-value=1.8  Score=32.09  Aligned_cols=34  Identities=15%  Similarity=0.048  Sum_probs=29.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.++|+++|++|+++..+++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~   41 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPA   41 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHH
Confidence            47888887 99999999999999999988766543

>PRK08267 short chain dehydrogenase; Provisional

Probab=84.85  E-value=1.5  Score=33.13  Aligned_cols=34  Identities=15%  Similarity=0.093  Sum_probs=28.8

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++++.|. +.+|..+.+.|+++|++|+.+..++++
T Consensus         3 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~   37 (260)
T PRK08267          3 SIFITGAASGIGRATALLFAAEGWRVGAYDINEAG   37 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            4778886 999999999999999999988776653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=84.75  E-value=2.2  Score=33.90  Aligned_cols=32  Identities=9%  Similarity=0.186  Sum_probs=26.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +||++.|. |.+|..+.++|+++|++++.++..
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~   34 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDK   34 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEec
Confidence            57999986 999999999999999887666543

>PRK05650 short chain dehydrogenase; Provisional

Probab=84.63  E-value=1.7  Score=33.22  Aligned_cols=34  Identities=15%  Similarity=0.141  Sum_probs=28.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |+|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~   35 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEE   35 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46788876 99999999999999999988776554

>PRK07201 short chain dehydrogenase; Provisional

Probab=84.62  E-value=1.9  Score=37.41  Aligned_cols=34  Identities=15%  Similarity=0.116  Sum_probs=29.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHH--hCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLK--KNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl--~~gheVvgVVTqPD   95 (124)
                      |||++.|. |.+|..++++|+  ++||+|.++...++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~   37 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS   37 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch
Confidence            68999986 999999999999  46899999998543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=84.51  E-value=1.5  Score=32.57  Aligned_cols=33  Identities=21%  Similarity=0.083  Sum_probs=28.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|++.|. +.+|..+.+.|+++|++|+++.+.++
T Consensus         3 ~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~   36 (255)
T TIGR01963         3 TALVTGAASGIGLAIALALAAAGANVVVNDLGEA   36 (255)
T ss_pred             EEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            5788885 99999999999999999999988765

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=84.50  E-value=3.1  Score=30.86  Aligned_cols=31  Identities=26%  Similarity=0.198  Sum_probs=26.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+..
T Consensus         7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~   38 (252)
T PRK06077          7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK   38 (252)
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            57888886 88999999999999999876553

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=84.50  E-value=1.9  Score=32.91  Aligned_cols=28  Identities=25%  Similarity=0.437  Sum_probs=24.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEE
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgV   90 (124)
                      ||++.|. |.+|..+.++|+++|++|+++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~   29 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVL   29 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEE
Confidence            4777775 999999999999999999876

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=84.39  E-value=1.3  Score=35.07  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=30.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .||+++|.|..|..+...|..+|++|+++-.+|++
T Consensus         4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~   38 (282)
T PRK05808          4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAA   38 (282)
T ss_pred             cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHH
Confidence            47999999999999999999999999988665554

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=84.38  E-value=2.1  Score=32.24  Aligned_cols=34  Identities=18%  Similarity=0.044  Sum_probs=28.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.+.|+++|++|+.+-..++
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~   41 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPA   41 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHH
Confidence            46888886 99999999999999999988866554

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=84.32  E-value=1.4  Score=38.92  Aligned_cols=36  Identities=17%  Similarity=0.218  Sum_probs=32.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTqPDKP   97 (124)
                      |||+++|.|-+|.+.--.|.+.  ||+|++|-..+++.
T Consensus         2 m~I~ViG~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v   39 (473)
T PLN02353          2 VKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISVPRI   39 (473)
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCCeEEEEECCHHHH
Confidence            8999999999999998888876  58899999888876

>PRK06125 short chain dehydrogenase; Provisional

Probab=84.25  E-value=2.1  Score=32.45  Aligned_cols=37  Identities=19%  Similarity=0.197  Sum_probs=30.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +..++++.|. +.+|..+.+.|+++|++|+++-..+++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~   43 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADA   43 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            3467888887 899999999999999999888776653

>PRK07024 short chain dehydrogenase; Provisional

Probab=84.23  E-value=1.7  Score=32.98  Aligned_cols=35  Identities=20%  Similarity=0.265  Sum_probs=29.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.+.|+++|++|+.+..++++
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~   38 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDA   38 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            57888886 999999999999999999988776553

>PRK08251 short chain dehydrogenase; Provisional

Probab=84.18  E-value=1.9  Score=32.16  Aligned_cols=35  Identities=14%  Similarity=0.268  Sum_probs=29.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++++.|. +.+|..+.+.|+++|++|+.+..++++
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~   38 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDR   38 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            45788886 999999999999999999988877653

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=84.16  E-value=2.4  Score=35.38  Aligned_cols=32  Identities=22%  Similarity=0.422  Sum_probs=27.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      |||+++|. |.+|..+++.|.+. ++++++|...
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~   36 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR   36 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence            89999995 99999999988875 5899999884

>PRK11579 putative oxidoreductase; Provisional

Probab=84.15  E-value=2.7  Score=34.28  Aligned_cols=34  Identities=21%  Similarity=0.239  Sum_probs=26.2

Q ss_pred             CCceEEEEcCCHHHHH-HHHHHHh-CCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAE-VYKLLKK-NGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~-iLeeLl~-~gheVvgVVTq   93 (124)
                      +++||+++|+|.+|.. .++.+.. .+.+++||...
T Consensus         3 ~~irvgiiG~G~i~~~~~~~~~~~~~~~~l~av~d~   38 (346)
T PRK11579          3 DKIRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSS   38 (346)
T ss_pred             CcceEEEECCCHHHHHHHHHHHhhCCCCEEEEEECC
Confidence            3589999999999985 5565554 36899999753

>PRK07062 short chain dehydrogenase; Provisional

Probab=84.02  E-value=2.2  Score=32.26  Aligned_cols=35  Identities=23%  Similarity=0.158  Sum_probs=29.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+++.|. +.+|..+.++|+++|++|+.+.+.+++
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~   44 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEER   44 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            45777887 899999999999999999988887754

>PRK07576 short chain dehydrogenase; Provisional

Probab=84.00  E-value=2.1  Score=32.90  Aligned_cols=35  Identities=20%  Similarity=0.266  Sum_probs=29.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|+++|++|+++-..+++
T Consensus        10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~   45 (264)
T PRK07576         10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEK   45 (264)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            46778887 999999999999999999998876654

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=83.97  E-value=1.4  Score=35.10  Aligned_cols=34  Identities=12%  Similarity=0.204  Sum_probs=29.3

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ||+|+|.|.+|..+-..|.++||+|..+-..+++
T Consensus         3 ~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~   36 (288)
T PRK09260          3 KLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQ   36 (288)
T ss_pred             EEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            6999999999999999898899999988665543

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=83.96  E-value=1.7  Score=35.94  Aligned_cols=35  Identities=17%  Similarity=0.325  Sum_probs=27.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..|||.++|+|.+|..+-..|.++|+ ++.....++
T Consensus         6 ~~mkI~IiGaGa~G~alA~~La~~g~-v~l~~~~~~   40 (341)
T PRK12439          6 REPKVVVLGGGSWGTTVASICARRGP-TLQWVRSAE   40 (341)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEeCCHH
Confidence            34899999999999999888888874 555545443

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=83.84  E-value=1.6  Score=37.74  Aligned_cols=34  Identities=32%  Similarity=0.457  Sum_probs=29.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||.++|+|.||..+-..|.++||+|..-...|+
T Consensus         2 ~kI~ViGaGswGTALA~~la~ng~~V~lw~r~~~   35 (329)
T COG0240           2 MKIAVIGAGSWGTALAKVLARNGHEVRLWGRDEE   35 (329)
T ss_pred             ceEEEEcCChHHHHHHHHHHhcCCeeEEEecCHH
Confidence            7899999999999998888889999988776543

>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent

Probab=83.82  E-value=2.4  Score=33.03  Aligned_cols=33  Identities=24%  Similarity=0.159  Sum_probs=27.2

Q ss_pred             ceEEEEcC--CHHHHHHHHHHHhCC--CeEEEEEcCC
Q psy16773         62 LRVAVIGQ--SSFAAEVYKLLKKNG--HSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT--p~FAa~iLeeLl~~g--heVvgVVTqP   94 (124)
                      |||+++.+  |..+.++++.+.+.+  .+|++|+++.
T Consensus         1 ~riail~sg~gs~~~~ll~~~~~~~l~~~I~~vi~~~   37 (190)
T TIGR00639         1 KRIVVLISGNGSNLQAIIDACKEGKIPASVVLVISNK   37 (190)
T ss_pred             CeEEEEEcCCChhHHHHHHHHHcCCCCceEEEEEECC
Confidence            57888777  999999999987654  4899999985

In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.

>PRK07074 short chain dehydrogenase; Provisional

Probab=83.81  E-value=2.2  Score=32.03  Aligned_cols=34  Identities=12%  Similarity=0.149  Sum_probs=29.0

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +|++.|. +.+|..+.+.|+++|++|+++.+.+++
T Consensus         4 ~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~   38 (257)
T PRK07074          4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAA   38 (257)
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            5777876 999999999999999999998877653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=83.77  E-value=2.3  Score=31.99  Aligned_cols=34  Identities=9%  Similarity=0.084  Sum_probs=28.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+-.+++
T Consensus        10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~   44 (254)
T PRK08085         10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAE   44 (254)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHH
Confidence            46788886 99999999999999999988776654

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=83.74  E-value=1.3  Score=36.85  Aligned_cols=23  Identities=22%  Similarity=0.499  Sum_probs=22.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG   84 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g   84 (124)
                      |||.|+|.|..|..++..|+++|
T Consensus         2 ~~IgfIG~G~Mg~Ai~~gl~~~g   24 (266)
T COG0345           2 MKIGFIGAGNMGEAILSGLLKSG   24 (266)
T ss_pred             ceEEEEccCHHHHHHHHHHHhcC
Confidence            79999999999999999999988

>PRK08862 short chain dehydrogenase; Provisional

Probab=83.67  E-value=2.4  Score=32.44  Aligned_cols=37  Identities=5%  Similarity=-0.019  Sum_probs=30.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +...+++.|. ..+|..+.++|.++|++|+.+-+.+++
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~   41 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSA   41 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            3456888887 889999999999999999988776654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=83.58  E-value=2.1  Score=32.30  Aligned_cols=36  Identities=17%  Similarity=0.185  Sum_probs=30.1

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+|++.|. +.+|..+.+.|+++|++|+.+...+++
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~   48 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE   48 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            367888886 999999999999999999888776553

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=83.45  E-value=3.1  Score=34.63  Aligned_cols=37  Identities=14%  Similarity=0.099  Sum_probs=32.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ++|.++|.|..|....+++.+.|++|+.+-..|+.|.
T Consensus         3 ~~igilG~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa   39 (372)
T PRK06019          3 KTIGIIGGGQLGRMLALAAAPLGYKVIVLDPDPDSPA   39 (372)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCch
Confidence            6799999999999999998888999999887777664

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=83.39  E-value=2.1  Score=34.22  Aligned_cols=34  Identities=15%  Similarity=0.067  Sum_probs=29.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +||+++|+|.+|..+-..|.++||+|..+-..++
T Consensus         4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~   37 (287)
T PRK08293          4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDE   37 (287)
T ss_pred             cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence            5899999999999998888888999988876554

>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed

Probab=83.31  E-value=2.7  Score=32.92  Aligned_cols=34  Identities=15%  Similarity=0.162  Sum_probs=28.0

Q ss_pred             ceEEEEcC--CHHHHHHHHHHHhCC--CeEEEEEcCCC
Q psy16773         62 LRVAVIGQ--SSFAAEVYKLLKKNG--HSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT--p~FAa~iLeeLl~~g--heVvgVVTqPD   95 (124)
                      |||+++-+  |..+.++++++.+.+  ++|+.|+++.+
T Consensus         2 ~ki~vl~sg~gs~~~~ll~~~~~~~~~~~I~~vvs~~~   39 (200)
T PRK05647          2 KRIVVLASGNGSNLQAIIDACAAGQLPAEIVAVISDRP   39 (200)
T ss_pred             ceEEEEEcCCChhHHHHHHHHHcCCCCcEEEEEEecCc
Confidence            78888766  999999999987653  78999998864

>PRK12937 short chain dehydrogenase; Provisional

Probab=83.27  E-value=3.4  Score=30.50  Aligned_cols=33  Identities=18%  Similarity=0.293  Sum_probs=27.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      +..+|++.|. +.+|..+.+.|+++|++|+.+..
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~   37 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYA   37 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence            3467888886 99999999999999999876654

>PRK06482 short chain dehydrogenase; Provisional

Probab=83.21  E-value=2  Score=32.88  Aligned_cols=35  Identities=20%  Similarity=0.212  Sum_probs=30.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.++|+++|++|+++..++++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~   38 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDA   38 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            46888886 999999999999999999998877653

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=83.21  E-value=2.4  Score=34.54  Aligned_cols=36  Identities=22%  Similarity=0.283  Sum_probs=31.3

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDKAN   98 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDKP~   98 (124)
                      ||+++|+|.+|..+...|+..|  ++|+.+-..+++..
T Consensus         2 kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~   39 (306)
T cd05291           2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAE   39 (306)
T ss_pred             EEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhh
Confidence            7999999999999999998888  68888888777653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK06181 short chain dehydrogenase; Provisional

Probab=83.09  E-value=2.1  Score=32.26  Aligned_cols=34  Identities=15%  Similarity=0.109  Sum_probs=29.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.+.|+++|++|+++...++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~   36 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNET   36 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            35778887 99999999999999999999887654

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=83.08  E-value=2.8  Score=31.50  Aligned_cols=31  Identities=19%  Similarity=0.278  Sum_probs=26.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      |||++.|.|.+|..+++.+.++ +.+++++.-
T Consensus         1 ikv~I~G~GriGr~v~~~~~~~~~~~lvai~d   32 (149)
T smart00846        1 IKVGINGFGRIGRLVLRALLERPDIEVVAIND   32 (149)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCCEEEEeec
Confidence            6899999999999999988754 689999864

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PRK08263 short chain dehydrogenase; Provisional

Probab=83.05  E-value=2.4  Score=32.60  Aligned_cols=35  Identities=14%  Similarity=0.090  Sum_probs=29.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.+.|+++|++|+.+..++++
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~   39 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTAT   39 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            35777886 999999999999999999988876653

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=83.00  E-value=2.8  Score=32.66  Aligned_cols=32  Identities=19%  Similarity=0.285  Sum_probs=27.0

Q ss_pred             EEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         64 VAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        64 IVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |++.|. |.+|..+.+.|+++||++++++..++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~   34 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK   34 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCC
Confidence            566775 99999999999999998888887654

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=83.00  E-value=2  Score=34.56  Aligned_cols=34  Identities=24%  Similarity=0.389  Sum_probs=28.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPD   95 (124)
                      +||+++|.|.+|..+...|.+.|+  +|.++-..++
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~   42 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAE   42 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence            689999999999999999988774  7777665554

>PLN02358 glyceraldehyde-3-phosphate dehydrogenase

Probab=82.94  E-value=2.5  Score=36.14  Aligned_cols=35  Identities=14%  Similarity=0.241  Sum_probs=29.2

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEE
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVF   91 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVV   91 (124)
                      |..+++||++.|.|.+|..+++.+.+. +.++++|.
T Consensus         1 ~~~~~lrVaI~G~GrIGr~~~r~~~~~~~velvaI~   36 (338)
T PLN02358          1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVN   36 (338)
T ss_pred             CCCCceEEEEEeecHHHHHHHHHHhhCCCcEEEEEe
Confidence            344569999999999999999998864 57999885

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=82.92  E-value=1.3  Score=38.73  Aligned_cols=36  Identities=14%  Similarity=0.111  Sum_probs=32.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      =+|+++|.|++|..+.++|.++||+++.|=.++++.
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~  453 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRV  453 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            469999999999999999999999999998888765

>PRK06101 short chain dehydrogenase; Provisional

Probab=82.92  E-value=1.9  Score=32.47  Aligned_cols=34  Identities=18%  Similarity=0.155  Sum_probs=28.4

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         3 ~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~   37 (240)
T PRK06101          3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV   37 (240)
T ss_pred             EEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            4677776 999999999999999999988776543

>PRK12744 short chain dehydrogenase; Provisional

Probab=82.89  E-value=4.1  Score=30.81  Aligned_cols=35  Identities=14%  Similarity=0.176  Sum_probs=28.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++++.|. +.+|..+.+.|+++|++|+.+..+++
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~   43 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSA   43 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCc
Confidence            357888886 99999999999999999877765543

>TIGR02712 urea_carbox urea carboxylase

Probab=82.88  E-value=2.7  Score=41.31  Aligned_cols=37  Identities=22%  Similarity=0.358  Sum_probs=34.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .||.++|.|++|.++++++.+.|+++++|.+.+|.+.
T Consensus         2 ~kvLI~g~Geia~~iiraak~lGi~~v~v~sd~d~~a   38 (1201)
T TIGR02712         2 DTVLIANRGEIAVRIIRTLRRMGIRSVAVYSDADAAS   38 (1201)
T ss_pred             cEEEEECCCHHHHHHHHHHHHcCCeEEEEECCCCCCc
Confidence            4799999999999999999999999999999998754

Members of this family are ATP-dependent urea carboxylase, including characterized members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae. The allophanate hydrolase domain of the yeast enzyme is not included in this model and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from Oleomonas sagaranensis was shown to be highly active on acetamide and formamide as well as urea.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=82.87  E-value=2.7  Score=32.48  Aligned_cols=33  Identities=15%  Similarity=0.215  Sum_probs=27.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCC--CeEEEEEcCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNG--HSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~g--heVvgVVTqPD   95 (124)
                      +|++.|. |.+|..++++|+++|  ++|.++++.++
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~   36 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS   36 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence            3677786 999999999999988  56999988765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B

Probab=82.84  E-value=0.89  Score=38.00  Aligned_cols=38  Identities=29%  Similarity=0.277  Sum_probs=29.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDKP   97 (124)
                      ...+|+++|+|.=|++++..|++++  .+|..|...|-..
T Consensus       189 ~~~~V~VVGgGQSAAEi~~~L~~~~~~~~V~~i~R~~~~~  228 (341)
T PF13434_consen  189 AGKRVAVVGGGQSAAEIFLDLLRRGPEAKVTWISRSPGFF  228 (341)
T ss_dssp             --EEEEEE-SSHHHHHHHHHHHHH-TTEEEEEEESSSS-E
T ss_pred             CCCeEEEECCcHhHHHHHHHHHhCCCCcEEEEEECCCccC
Confidence            4579999999999999999999875  4899888877543

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=82.75  E-value=2.7  Score=34.28  Aligned_cols=36  Identities=11%  Similarity=0.089  Sum_probs=31.4

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      +|.++|+|..|....+++.+.|++|+.+-..|+.|.
T Consensus         1 ~igiiG~gql~~~l~~aa~~lG~~v~~~d~~~~~p~   36 (352)
T TIGR01161         1 TVGILGGGQLGRMLALAARPLGIKVHVLDPDANSPA   36 (352)
T ss_pred             CEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCCCh
Confidence            388999999999999999999999999877777664

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK06196 oxidoreductase; Provisional

Probab=82.68  E-value=2.6  Score=33.43  Aligned_cols=35  Identities=23%  Similarity=0.202  Sum_probs=30.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|+++|++|+++..++++
T Consensus        27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~   62 (315)
T PRK06196         27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDV   62 (315)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            46888887 899999999999999999998776653

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=82.53  E-value=3.8  Score=28.92  Aligned_cols=31  Identities=23%  Similarity=0.274  Sum_probs=27.6

Q ss_pred             EEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         64 VAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        64 IVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |+++|.|.+|..+-..|.+.||+|..+...+
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~   31 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP   31 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred             CEEECcCHHHHHHHHHHHHCCCceEEEEccc
Confidence            7899999999999988988899988887766

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK12746 short chain dehydrogenase; Provisional

Probab=82.47  E-value=3.7  Score=30.69  Aligned_cols=32  Identities=16%  Similarity=0.124  Sum_probs=27.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      .+|++.|. +.+|..+.+.|+++|++|+.+++.
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r   39 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGR   39 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            57899997 999999999999999998766543

>PRK07579 hypothetical protein; Provisional

Probab=82.45  E-value=2.4  Score=35.08  Aligned_cols=35  Identities=11%  Similarity=0.022  Sum_probs=31.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC----CCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN----GHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~----gheVvgVVTqPDK   96 (124)
                      +||+|+|.-..|..+++.|+++    .+++.+|.+..++
T Consensus         2 k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   40 (245)
T PRK07579          2 KTILVLTDNVHAHALAVDLIARKNDMDVDYFCSFKSQTS   40 (245)
T ss_pred             ceEEEEcccHHHHHHHHHHHhhccCcceEEEEeccCCcc
Confidence            6899999999999999999964    2688999998876

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=82.38  E-value=3.4  Score=34.31  Aligned_cols=40  Identities=18%  Similarity=0.217  Sum_probs=31.2

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDK   96 (124)
                      |.+..+||+++|.|.+|..+.-.|..++.  |++.+=...++
T Consensus         2 ~~~~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~   43 (315)
T PRK00066          2 MKKQHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEK   43 (315)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCch
Confidence            44556899999999999999888887775  67776665554

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=82.31  E-value=2.5  Score=33.49  Aligned_cols=35  Identities=26%  Similarity=0.232  Sum_probs=29.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~   42 (322)
T PRK07453          7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK   42 (322)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            46788886 999999999999999999888765543

>PF00044 Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; InterPro: IPR020828 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis [] by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate

Probab=82.30  E-value=2.5  Score=32.17  Aligned_cols=30  Identities=17%  Similarity=0.226  Sum_probs=26.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVV   91 (124)
                      |||++-|-|.+|..+++.++.+ ..||+||-
T Consensus         1 ikVgINGfGRIGR~v~r~~~~~~~~evvaIn   31 (151)
T PF00044_consen    1 IKVGINGFGRIGRLVLRAALDQPDIEVVAIN   31 (151)
T ss_dssp             EEEEEESTSHHHHHHHHHHHTSTTEEEEEEE
T ss_pred             CEEEEECCCcccHHHHHhhcccceEEEEEEe
Confidence            6899999999999999999965 47999993

The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme []. GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself. GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins []. This entry represents the N-terminal domain which is a Rossmann NAD(P) binding fold.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 2G82_Q 1CER_R 1ZNQ_Q 3GPD_G 1U8F_R 3DOC_B 2YYY_A 1GPD_G 4GPD_1 2I5P_O ....

>PRK06194 hypothetical protein; Provisional

Probab=82.26  E-value=3.3  Score=31.75  Aligned_cols=34  Identities=18%  Similarity=0.126  Sum_probs=28.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+-..++
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~   41 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQD   41 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChH
Confidence            56888887 99999999999999999987766543

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=82.24  E-value=2.7  Score=35.26  Aligned_cols=31  Identities=23%  Similarity=0.351  Sum_probs=27.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      +||++.|.|.+|..+++.+.++ +.+|+||.-
T Consensus         2 ikVaI~G~GrIGr~va~al~~~~d~eLvav~d   33 (341)
T PRK04207          2 IKVGVNGYGTIGKRVADAVAAQPDMELVGVAK   33 (341)
T ss_pred             eEEEEECCCHHHHHHHHHHhcCCCcEEEEEEC
Confidence            7999999999999999988764 589999986

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=82.18  E-value=2.3  Score=33.77  Aligned_cols=31  Identities=13%  Similarity=0.291  Sum_probs=26.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |||.+.|. |.+|..+.+.|+++| +|+++...
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~   32 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVH   32 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccc
Confidence            68999997 999999999999888 68776543

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=82.07  E-value=3.3  Score=35.06  Aligned_cols=27  Identities=22%  Similarity=0.487  Sum_probs=22.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeE
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSV   87 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheV   87 (124)
                      +|||+++|+ |..|.++++.|.+++|.+
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~   31 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPV   31 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCc
Confidence            389999998 999999999888766643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=81.86  E-value=3.3  Score=30.56  Aligned_cols=30  Identities=20%  Similarity=0.232  Sum_probs=25.2

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      .+++.|. +.+|..+.++|+++|++|+.+..
T Consensus         3 ~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~   33 (247)
T PRK09730          3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQ   33 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            4677787 99999999999999999877553

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=81.85  E-value=3.1  Score=34.81  Aligned_cols=36  Identities=19%  Similarity=0.279  Sum_probs=31.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..|+|.++|.|.+|..+.+.|...|++|.+.-..++
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~  180 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPN  180 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            347899999999999999998888999998876654

>PRK05693 short chain dehydrogenase; Provisional

Probab=81.76  E-value=2.5  Score=32.37  Aligned_cols=34  Identities=18%  Similarity=0.186  Sum_probs=28.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++++.|. +.+|..+.+.|.++|++|+++..++++
T Consensus         3 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~   37 (274)
T PRK05693          3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAED   37 (274)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            5777776 999999999999999999988776643

>PRK05472 redox-sensing transcriptional repressor Rex; Provisional

Probab=81.70  E-value=3.7  Score=31.69  Aligned_cols=33  Identities=24%  Similarity=0.466  Sum_probs=26.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHH--hCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLK--KNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl--~~gheVvgVVTq   93 (124)
                      +.||+++|+|..|..+.+.+.  ..|++|+|++-.
T Consensus        84 ~~rV~IIGaG~iG~~l~~~~~~~~~g~~ivgv~D~  118 (213)
T PRK05472         84 TWNVALVGAGNLGRALLNYNGFEKRGFKIVAAFDV  118 (213)
T ss_pred             CcEEEEECCCHHHHHHHHhhhcccCCcEEEEEEEC
Confidence            468999999999998887643  347999999865

>PRK06545 prephenate dehydrogenase; Validated

Probab=81.66  E-value=2.7  Score=35.03  Aligned_cols=33  Identities=15%  Similarity=0.124  Sum_probs=28.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ||.|+|+|.+|..+...|.+.|++|..+-..++
T Consensus         2 ~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~   34 (359)
T PRK06545          2 TVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPS   34 (359)
T ss_pred             eEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence            699999999999999999999998877666655

>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional

Probab=81.56  E-value=3.3  Score=33.44  Aligned_cols=38  Identities=26%  Similarity=0.207  Sum_probs=30.9

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |.++.++|+++|.|..|..+--.|.++|++|+-+=..+
T Consensus         3 ~~~~~~dViIVGaG~~Gl~~A~~L~~~G~~v~liE~~~   40 (388)
T PRK07494          3 MEKEHTDIAVIGGGPAGLAAAIALARAGASVALVAPEP   40 (388)
T ss_pred             CCCCCCCEEEECcCHHHHHHHHHHhcCCCeEEEEeCCC
Confidence            66677899999999999988878888899876665544

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=81.47  E-value=1.7  Score=39.01  Aligned_cols=37  Identities=16%  Similarity=0.229  Sum_probs=33.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +.+|+++|.|.+|..+.+.|.++|++++.|-.+|++.
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v  436 (601)
T PRK03659        400 KPQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAV  436 (601)
T ss_pred             cCCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHH
Confidence            4689999999999999999998999999999998864

>PRK06223 malate dehydrogenase; Reviewed

Probab=81.47  E-value=3.9  Score=32.81  Aligned_cols=36  Identities=22%  Similarity=0.228  Sum_probs=30.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      |||+++|.|..|..+...+...|+ +|+.+-..+++.
T Consensus         3 ~KI~VIGaG~vG~~ia~~la~~~~~ev~L~D~~~~~~   39 (307)
T PRK06223          3 KKISIIGAGNVGATLAHLLALKELGDVVLFDIVEGVP   39 (307)
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEEECCCchh
Confidence            799999999999999888877665 888887766654

>PRK07832 short chain dehydrogenase; Provisional

Probab=81.46  E-value=2.5  Score=32.44  Aligned_cols=33  Identities=21%  Similarity=0.135  Sum_probs=27.8

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++++.|. +.+|..+.++|.++|++|+.+...++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~   35 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDAD   35 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            5788886 99999999999999999988776554

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=81.42  E-value=2.4  Score=29.32  Aligned_cols=34  Identities=29%  Similarity=0.300  Sum_probs=28.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +..+|+++|.|+.|..-++.|++.|.+|.-|-..
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~   39 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPE   39 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCc
Confidence            3468999999999999999999999888776655

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=81.33  E-value=4.3  Score=32.24  Aligned_cols=35  Identities=29%  Similarity=0.230  Sum_probs=31.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +.+||++.|-|.+|....+.|.+.|..|++|.-.-
T Consensus        22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~   56 (217)
T cd05211          22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPD   56 (217)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCC
Confidence            45899999999999999999999999999988643

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=81.32  E-value=3.7  Score=33.83  Aligned_cols=33  Identities=18%  Similarity=0.246  Sum_probs=28.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCC--eEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGH--SVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gh--eVvgVVTqP   94 (124)
                      |||+++|+ |.+|..+...|+..|+  +|+++-..+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            79999997 9999999999998875  588887744

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK06398 aldose dehydrogenase; Validated

Probab=81.29  E-value=5.2  Score=30.60  Aligned_cols=34  Identities=21%  Similarity=0.202  Sum_probs=28.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.+.|.++|++|+.+-...+
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~   41 (258)
T PRK06398          7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP   41 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc
Confidence            56888887 89999999999999999988766554

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=81.28  E-value=2.1  Score=37.57  Aligned_cols=37  Identities=24%  Similarity=0.303  Sum_probs=33.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC-CeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG-HSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g-heVvgVVTqPDKP~   98 (124)
                      |||+++|.|.+|..+.+.|.+++ +||...=+.+++..
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~   39 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCA   39 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHH
Confidence            89999999999999999999887 89999888887763

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=81.28  E-value=3.3  Score=34.60  Aligned_cols=35  Identities=17%  Similarity=0.332  Sum_probs=28.3

Q ss_pred             CceEEEEcCCHHHHHHHHHHHh-CCCeEEEEEc-CCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKK-NGHSVVGVFT-VVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~-~gheVvgVVT-qPD   95 (124)
                      ++||+++|+|.+|...+..+++ .+.++++|+- .|+
T Consensus         1 klrVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~e   37 (285)
T TIGR03215         1 KVKVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPE   37 (285)
T ss_pred             CcEEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcc
Confidence            3799999999999999888875 4689998875 444

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK08265 short chain dehydrogenase; Provisional

Probab=81.19  E-value=4  Score=31.21  Aligned_cols=34  Identities=26%  Similarity=0.159  Sum_probs=29.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+-.+++
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~   41 (261)
T PRK08265          7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDAD   41 (261)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            57888887 99999999999999999988877665

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=81.06  E-value=3  Score=31.68  Aligned_cols=34  Identities=24%  Similarity=0.302  Sum_probs=28.1

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ||+++|+|..|..+-..++..||+|..+-..++.
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~   34 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEA   34 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            6899999999999988888889999988876653

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=81.00  E-value=5.1  Score=31.62  Aligned_cols=36  Identities=19%  Similarity=0.194  Sum_probs=30.2

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.++|++.|. +.+|..+.+.|+++|++|+.+...++
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~   81 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH   81 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            3467889986 99999999999999999988776654

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=80.84  E-value=3  Score=33.10  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=24.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCe-EEEE
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHS-VVGV   90 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~ghe-VvgV   90 (124)
                      |||++.|. |.+|..+.++|+++|++ |+++
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~   31 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNV   31 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEe
Confidence            68999987 99999999999998876 4443

>PRK06197 short chain dehydrogenase; Provisional

Probab=80.83  E-value=2.5  Score=33.19  Aligned_cols=35  Identities=23%  Similarity=0.227  Sum_probs=29.6

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+.+..+++
T Consensus        16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~   51 (306)
T PRK06197         16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLD   51 (306)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            356888887 99999999999999999988877654

>PRK07236 hypothetical protein; Provisional

Probab=80.75  E-value=6.4  Score=32.11  Aligned_cols=37  Identities=24%  Similarity=0.095  Sum_probs=30.8

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++.++|+++|.|-.|..+-..|.++|++|+-+=..+.
T Consensus         4 ~~~~~ViIVGaG~aGl~~A~~L~~~G~~v~v~E~~~~   40 (386)
T PRK07236          4 MSGPRAVVIGGSLGGLFAALLLRRAGWDVDVFERSPT   40 (386)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            3558999999999999988888888999877776653

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=80.70  E-value=3.9  Score=31.15  Aligned_cols=36  Identities=14%  Similarity=0.039  Sum_probs=28.8

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..++++.|. +.+|..+.+.|+++|++|+.+-..++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~   45 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQE   45 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            3346788887 89999999999999999887765544

>PRK07775 short chain dehydrogenase; Provisional

Probab=80.56  E-value=3.4  Score=31.89  Aligned_cols=34  Identities=24%  Similarity=0.114  Sum_probs=28.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..+++.|. +.+|..+.+.|+++|++|+.+...++
T Consensus        11 ~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~   45 (274)
T PRK07775         11 RPALVAGASSGIGAATAIELAAAGFPVALGARRVE   45 (274)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46788886 99999999999999999988876554

>PRK06270 homoserine dehydrogenase; Provisional

Probab=80.54  E-value=3  Score=34.83  Aligned_cols=32  Identities=25%  Similarity=0.442  Sum_probs=27.3

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC----------CCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN----------GHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~----------gheVvgVVT   92 (124)
                      .+||+++|.|.+|..+++.|.++          +.+|++|..
T Consensus         2 ~i~V~IiG~G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d   43 (341)
T PRK06270          2 EMKIALIGFGGVGQGVAELLAEKREYLKKRYGLDLKVVAIAD   43 (341)
T ss_pred             eEEEEEECCCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEe
Confidence            48999999999999999888754          468999986

>PRK05865 hypothetical protein; Provisional

Probab=80.54  E-value=3.1  Score=39.78  Aligned_cols=33  Identities=30%  Similarity=0.461  Sum_probs=29.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||++.|. |.+|..+.+.|+++||+|+++...+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~   34 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHR   34 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc
Confidence            68999996 9999999999999999999988764

>PRK12743 oxidoreductase; Provisional

Probab=80.42  E-value=3.8  Score=31.06  Aligned_cols=32  Identities=16%  Similarity=0.124  Sum_probs=26.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ++++.|. +.+|..+.+.|+++|++|+.+....
T Consensus         4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~   36 (256)
T PRK12743          4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSD   36 (256)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4777787 8999999999999999998776543

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=80.28  E-value=3.6  Score=30.05  Aligned_cols=30  Identities=20%  Similarity=0.272  Sum_probs=25.5

Q ss_pred             EEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         65 AVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        65 VFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ++.|. +.+|..+.+.|+++||+|+++.+.+
T Consensus         2 lItG~~g~iG~~la~~l~~~G~~v~~~~r~~   32 (239)
T TIGR01830         2 LVTGASRGIGRAIALKLAKEGAKVIITYRSS   32 (239)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            45665 9999999999999999998887765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PLN02735 carbamoyl-phosphate synthase

Probab=80.19  E-value=3.8  Score=39.87  Aligned_cols=37  Identities=19%  Similarity=0.275  Sum_probs=31.9

Q ss_pred             CceEEEEcCCHH-----------HHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSF-----------AAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~F-----------Aa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ..||.++|+|.+           |..++++|.+.||+|++|-.+|+..
T Consensus        23 ~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~~Vi~vd~np~t~   70 (1102)
T PLN02735         23 LKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLINSNPATI   70 (1102)
T ss_pred             CCEEEEECCCccccccceeecchHHHHHHHHHHcCCEEEEEeCCcccc
Confidence            368999999885           6679999999999999999998653

>PRK08643 acetoin reductase; Validated

Probab=80.19  E-value=3.8  Score=30.74  Aligned_cols=34  Identities=21%  Similarity=0.147  Sum_probs=28.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++++.|. +.+|..+.+.|+++|++|+.+..++++
T Consensus         4 ~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~   38 (256)
T PRK08643          4 VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEET   38 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            4677777 999999999999999999888776543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=80.10  E-value=5.2  Score=29.75  Aligned_cols=34  Identities=12%  Similarity=0.158  Sum_probs=28.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.++|.++|++|+.+-.+++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~   37 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY   37 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch
Confidence            45778886 89999999999999999998876654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	124
1s3i_A	310	Crystal Structure Of The N Terminal Hydrolase Domai		5e-08
2bw0_A	329	Crystal Structure Of The Hydrolase Domain Of Human		6e-08

>pdb|1S3I|A Chain A, Crystal Structure Of The N Terminal Hydrolase Domain Of 10- Formyltetrahydrofolate Dehydrogenase Length = 310

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           +++AVIGQS F  EVY  L+K GH VVGVFT+ DK  + D
Sbjct: 1   MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDGKAD 40

>pdb|2BW0|A Chain A, Crystal Structure Of The Hydrolase Domain Of Human 10- Formyltetrahydrofolate 2 Dehydrogenase Length = 329

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED 101
           +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D
Sbjct: 23  MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKAD 62

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	124
2bw0_A	329	10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase	1e-10

>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A Length = 329

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 5/63 (7%)

Query: 41  HPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRE 100
           H +G+        +  ++   +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + 
Sbjct: 7   HSSGVDLG-----TENLYFQSMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKA 61

Query: 101 DIV 103
           D +
Sbjct: 62  DPL 64

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	124
3rfo_A	317	Methionyl-tRNA formyltransferase; structural genom	99.27
3tqq_A	314	Methionyl-tRNA formyltransferase; protein synthesi	99.27
3q0i_A	318	Methionyl-tRNA formyltransferase; structural genom	99.25
2bw0_A	329	10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase	99.17
1fmt_A	314	Methionyl-tRNA FMet formyltransferase; initiator t	99.11
2bln_A	305	Protein YFBG; transferase, formyltransferase, L-AR	98.9
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.61
2ywr_A	216	Phosphoribosylglycinamide formyltransferase; rossm	97.84
3auf_A	229	Glycinamide ribonucleotide transformylase 1; struc	97.73
3av3_A	212	Phosphoribosylglycinamide formyltransferase; struc	97.43
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.04
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	96.95
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.92
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.91
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.78
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.65
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.64
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.55
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.48
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.47
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.42
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	96.38
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.33
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	96.29
3da8_A	215	Probable 5'-phosphoribosylglycinamide formyltransf	96.22
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	96.2
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.19
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.19
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.18
3tqr_A	215	Phosphoribosylglycinamide formyltransferase; purin	96.13
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.13
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.98
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.97
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	95.93
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.92
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	95.91
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.9
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.89
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.86
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.83
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.83
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.82
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	95.81
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.79
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	95.77
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.76
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.76
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.75
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	95.73
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.67
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.56
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.56
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	95.55
1jkx_A	212	GART;, phosphoribosylglycinamide formyltransferase	95.5
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.49
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	95.49
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	95.4
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.32
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.3
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.3
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.27
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.26
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.26
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.25
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	95.23
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.22
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.21
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.21
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	95.2
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	95.19
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.19
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.18
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.15
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.1
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.09
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.09
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	95.07
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	95.06
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.05
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.02
3nkl_A	141	UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo	95.01
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	94.98
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.95
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.95
3c85_A	183	Putative glutathione-regulated potassium-efflux S	94.92
3bio_A	304	Oxidoreductase, GFO/IDH/MOCA family; structural ge	94.92
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	94.89
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	94.89
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	94.89
1xq6_A	253	Unknown protein; structural genomics, protein stru	94.88
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.86
3m2t_A	359	Probable dehydrogenase; PSI, SGXNY, structural gen	94.83
4ds3_A	209	Phosphoribosylglycinamide formyltransferase; struc	94.82
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	94.82
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	94.78
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	94.74
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	94.73
1meo_A	209	Phosophoribosylglycinamide formyltransferase; puri	94.72
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	94.72
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	94.69
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	94.67
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	94.67
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	94.66
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	94.63
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	94.63
4g65_A	461	TRK system potassium uptake protein TRKA; structur	94.6
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	94.58
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	94.58
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	94.55
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	94.55
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	94.53
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.49
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	94.48
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	94.46
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.45
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	94.43
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	94.43
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	94.41
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	94.4
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	94.37
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	94.21
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	94.13
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	94.08
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	94.06
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	94.06
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	94.04
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	94.04
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	94.04
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.02
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	93.95
4ea9_A	220	Perosamine N-acetyltransferase; beta helix, acetyl	93.94
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	93.92
4ezb_A	317	Uncharacterized conserved protein; structural geno	93.9
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	93.89
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	93.84
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	93.84
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	93.84
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	93.81
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	93.8
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	93.77
1f06_A	320	MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH	93.76
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	93.76
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	93.75
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.75
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	93.66
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	93.66
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	93.64
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	93.62
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	93.61
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	93.59
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	93.57
4dim_A	403	Phosphoribosylglycinamide synthetase; structural g	93.57
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	93.56
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	93.56
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	93.55
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	93.51
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	93.44
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	93.41
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	93.4
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	93.4
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	93.4
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	93.36
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	93.34
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	93.34
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	93.34
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	93.33
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	93.33
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	93.31
3ouz_A	446	Biotin carboxylase; structural genomics, center fo	93.3
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	93.28
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	93.24
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	93.23
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	93.2
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	93.19
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	93.18
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	93.15
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	93.13
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	92.94
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	92.92
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	92.9
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	92.81
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	92.8
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	92.79
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	92.74
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	92.67
3btv_A	438	Galactose/lactose metabolism regulatory protein GA	92.67
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	92.65
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	92.65
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	92.62
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	92.53
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	92.53
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	92.44
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	92.44
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	92.43
3tl2_A	315	Malate dehydrogenase; center for structural genomi	92.42
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	92.4
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	92.38
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	92.36
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	92.34
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	92.33
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	92.32
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	92.32
4ew6_A	330	D-galactose-1-dehydrogenase protein; nysgrc, PSI-b	92.29
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	92.28
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	92.24
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	92.22
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	92.19
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	92.17
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	92.13
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	92.1
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	92.05
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	92.0
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	91.94
3c1a_A	315	Putative oxidoreductase; ZP_00056571.1, oxidoreduc	91.91
2p2s_A	336	Putative oxidoreductase; YP_050235.1, structural g	91.86
1ydw_A	362	AX110P-like protein; structural genomics, protein	91.86
1xq1_A	266	Putative tropinone reducatse; structural genomics,	91.85
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	91.83
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	91.81
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	91.78
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	91.78
2dzd_A	461	Pyruvate carboxylase; biotin carboxylase, ligase;	91.77
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	91.69
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	91.69
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	91.69
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	91.66
3vot_A	425	L-amino acid ligase, BL00235; ATP-grAsp motif, ATP	91.65
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	91.64
4f6c_A	427	AUSA reductase domain protein; thioester reductase	91.63
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	91.57
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	91.56
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	91.54
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	91.52
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	91.5
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	91.46
3bfp_A	194	Acetyltransferase; LEFT-handed beta helix, COA bin	91.44
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	91.43
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	91.41
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	91.39
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	91.38
3kcq_A	215	Phosphoribosylglycinamide formyltransferase; struc	91.29
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	91.26
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	91.25
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	91.19
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	91.13
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	91.13
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	91.11
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	91.1
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	91.04
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	90.94
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	90.89
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	90.87
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	90.85
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	90.82
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	90.79
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	90.75
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	90.71
3dty_A	398	Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram	90.69
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	90.61
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	90.58
1lc0_A	294	Biliverdin reductase A; oxidoreductase, tetrapyrro	90.58
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	90.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	90.56
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	90.52
2zbw_A	335	Thioredoxin reductase; redox protein, oxidoreducta	90.52
4f6l_B	508	AUSA reductase domain protein; thioester reductase	90.5
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	90.5
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	90.41
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	90.38
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	90.36
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	90.36
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	90.34
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	90.25
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	90.23
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	90.2
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	90.19
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	90.15
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	90.11
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	90.1
1j5p_A	253	Aspartate dehydrogenase; TM1643, structural genomi	90.1
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	90.1
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	90.02
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	90.02
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	89.89
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	89.87
4had_A	350	Probable oxidoreductase protein; structural genomi	89.84
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	89.79
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	89.74
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	89.69
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	89.65
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	89.64
4hb9_A	412	Similarities with probable monooxygenase; flavin,	89.63
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	89.63
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	89.62
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	89.55
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	89.54
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	89.46
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	89.41
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	89.39
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	89.38
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	89.35
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	89.35
1h6d_A	433	Precursor form of glucose-fructose oxidoreductase;	89.28
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	89.26
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	89.15
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	89.04
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	88.94
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	88.93
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	88.92
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	88.88
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	88.85
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	88.81
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	88.81
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	88.81
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	88.8
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	88.77
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	88.77
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	88.69
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	88.68
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	88.63
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	88.62
4gmf_A	372	Yersiniabactin biosynthetic protein YBTU; rossmann	88.59
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	88.54
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	88.48
3c7a_A	404	Octopine dehydrogenase; L) stereospecific opine de	88.48
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	88.34
2r85_A	334	PURP protein PF1517; ATP-grAsp superfamily, unknow	88.24
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	88.15
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	88.11
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	88.11
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	88.03
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	88.01
1y56_B	382	Sarcosine oxidase; dehydrogenase, protein-protein	87.97
2vou_A	397	2,6-dihydroxypyridine hydroxylase; oxidoreductase,	87.91
1c0p_A	363	D-amino acid oxidase; alpha-beta-alpha motif, flav	87.84
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	87.83
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	87.74
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	87.73
3u9t_A	675	MCC alpha, methylcrotonyl-COA carboxylase, alpha-s	87.68
3r9u_A	315	Thioredoxin reductase; structural genomics, center	87.66
2nvw_A	479	Galactose/lactose metabolism regulatory protein GA	87.55
3itj_A	338	Thioredoxin reductase 1; disulfide B flavoprotein,	87.47
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	87.46
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	87.45
2b4r_O	345	Glyceraldehyde-3-phosphate dehydrogenase; SGPP, st	87.45
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	87.44
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	87.4
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	87.36
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	87.33
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	87.32
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	87.3
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	87.24
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	87.18
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	87.14
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	87.07
3aw8_A	369	PURK, phosphoribosylaminoimidazole carboxylase, AT	87.02
3c8m_A	331	Homoserine dehydrogenase; structural genomics, APC	87.0
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	86.99
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	86.95
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	86.85
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	86.79
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	86.75
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	86.52
3kkj_A	336	Amine oxidase, flavin-containing; oxidoreductase,	86.49
1ebf_A	358	Homoserine dehydrogenase; dinucleotide, NAD, dimer	86.43
3rih_A	293	Short chain dehydrogenase or reductase; structural	86.41
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	86.36
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	86.31
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	86.28
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	86.25
3ing_A	325	Homoserine dehydrogenase; NP_394635.1, structural	86.19
2z04_A	365	Phosphoribosylaminoimidazole carboxylase ATPase su	86.08
3n0v_A	286	Formyltetrahydrofolate deformylase; formyl transfe	86.08
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	85.94
2vt3_A	215	REX, redox-sensing transcriptional repressor REX;	85.91
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	85.91
3o0h_A	484	Glutathione reductase; ssgcid, structur genomics,	85.85
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	85.78
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	85.75
1lnq_A	336	MTHK channels, potassium channel related protein;	85.55
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	85.54
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	85.46
3nix_A	421	Flavoprotein/dehydrogenase; structural genomics, P	85.34
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	85.33
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	85.32
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	85.31
3cxt_A	291	Dehydrogenase with different specificities; rossma	85.25
4h3v_A	390	Oxidoreductase domain protein; structural genomics	85.23
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	85.21
1vkz_A	412	Phosphoribosylamine--glycine ligase; TM1250, struc	85.11
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	85.06
3e5r_O	337	PP38, glyceraldehyde-3-phosphate dehydrogenase, cy	85.05
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	84.91
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	84.86
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	84.77
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	84.77
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	84.73
2vpq_A	451	Acetyl-COA carboxylase; bacteria, ATP-grAsp domain	84.71
3moi_A	387	Probable dehydrogenase; structural genomics, PSI2,	84.55
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	84.51
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	84.47
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	84.46
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	84.42
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	84.3
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	84.27
4a9w_A	357	Monooxygenase; baeyer-villiger, FAD, oxidoreductas	84.26
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	84.16
1ulz_A	451	Pyruvate carboxylase N-terminal domain; biotin car	84.13
2ejw_A	332	HDH, homoserine dehydrogenase; NAD-dependent, oxid	84.12
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	84.07
4fgw_A	391	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi	84.03
1u8f_O	335	GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l	84.02
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	83.96
2w70_A	449	Biotin carboxylase; ligase, ATP-binding, fatty aci	83.89
2gag_B	405	Heterotetrameric sarcosine oxidase beta-subunit; f	83.8
3rp8_A	407	Flavoprotein monooxygenase; FAD-binding protein, o	83.78
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	83.78
3d1c_A	369	Flavin-containing putative monooxygenase; NP_37310	83.76
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	83.75
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	83.74
1vdc_A	333	NTR, NADPH dependent thioredoxin reductase; hypoth	83.73
3cps_A	354	Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g	83.63
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	83.63
3f8d_A	323	Thioredoxin reductase (TRXB-3); redox protein, nuc	83.62
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	83.6
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	83.57
2q7x_A	326	UPF0052 protein SP_1565; structural genomics, join	83.51
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	83.35
3ip3_A	337	Oxidoreductase, putative; structural genomics, PSI	83.28
3hja_A	356	GAPDH, glyceraldehyde-3-phosphate dehydrogenase; n	83.27
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	83.25
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	83.23
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	83.19
1xhl_A	297	Short-chain dehydrogenase/reductase family member	83.19
2bi7_A	384	UDP-galactopyranose mutase; FAD, flavoprotein, iso	83.09
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	83.07
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	83.06
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	83.03
4dqx_A	277	Probable oxidoreductase protein; structural genomi	83.01
1ryi_A	382	Glycine oxidase; flavoprotein, protein-inhibitor c	82.96
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	82.96
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	82.95
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	82.91
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	82.87
1trb_A	320	Thioredoxin reductase; oxidoreductase(flavoenzyme)	82.84
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	82.82
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	82.81
2x3n_A	399	Probable FAD-dependent monooxygenase; oxidoreducta	82.8
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	82.8
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	82.67
3dme_A	369	Conserved exported protein; structural genomics, P	82.59
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	82.54
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	82.52
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	82.51
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	82.44
2ywl_A	180	Thioredoxin reductase related protein; uncharacter	82.4
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	82.37
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	82.37
2pn1_A	331	Carbamoylphosphate synthase large subunit; ZP_0053	82.22
3mtj_A	444	Homoserine dehydrogenase; rossmann-fold, PSI, MCSG	82.21
3f4l_A	345	Putative oxidoreductase YHHX; structural genomics,	82.18
1spx_A	278	Short-chain reductase family member (5L265); paral	82.18
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	82.16
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	82.04
1iow_A	306	DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen pho	82.02
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	81.99
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	81.94
2yyy_A	343	Glyceraldehyde-3-phosphate dehydrogenase; glyceral	81.83
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	81.79
3fbs_A	297	Oxidoreductase; structural genomics, PSI2, MCSG, p	81.78
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	81.77
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	81.69
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	81.62
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	81.59
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	81.43
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	81.41
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	81.33
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	81.31
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	81.31
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	81.24
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	81.19
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	81.12
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	81.1
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	81.07
3do5_A	327	HOM, homoserine dehydrogenase; NP_069768.1, putati	81.01
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	81.01
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	81.0
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	81.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	80.95
3hbl_A	1150	Pyruvate carboxylase; TIM barrel, ligase; HET: BTI	80.79
2duw_A	145	Putative COA-binding protein; ligand binding prote	80.71
2g82_O	331	GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G	80.63
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	80.61
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	80.54
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	80.41
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	80.38
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	80.3
3cz5_A	153	Two-component response regulator, LUXR family; str	80.26
3upl_A	446	Oxidoreductase; rossmann fold, NADPH binding; 1.50	80.19
2dt5_A	211	AT-rich DNA-binding protein; REX, NADH, NAD, rossm	80.14

>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}

Probab=99.27  E-value=3.1e-12  Score=104.09  Aligned_cols=39  Identities=26%  Similarity=0.496  Sum_probs=34.0

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      +|||+|||||+||+++|++|+++||+|++|+||||||.+
T Consensus         2 ~mrivf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~g   40 (314)
T 3tqq_A            2 SLKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSG   40 (314)
T ss_dssp             CCEEEEEECSGGGHHHHHHHHHSSSEEEEEECCCC----
T ss_pred             CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCCCccc
Confidence            499999999999999999999999999999999999964

>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}

Probab=99.25  E-value=4.9e-12  Score=103.23  Aligned_cols=40  Identities=25%  Similarity=0.439  Sum_probs=34.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      ++|||+||||++||+++|++|++++|+|++|+||||||.+
T Consensus         6 ~~mrivf~Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~g   45 (318)
T 3q0i_A            6 QSLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPAG   45 (318)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHTSSSEEEEEECCCC----
T ss_pred             cCCEEEEEecCHHHHHHHHHHHHCCCcEEEEEcCCCCccc
Confidence            5799999999999999999999999999999999999974

>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A

Probab=99.17  E-value=2.4e-11  Score=99.27  Aligned_cols=67  Identities=45%  Similarity=0.703  Sum_probs=47.1

Q ss_pred             ccCceeEEecCCCCccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCcc----------eeeehhh
Q psy16773         41 HPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIV----------DEMYSLW  110 (124)
Q Consensus        41 ~~~~~~~~~~~s~~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~~l----------~~~~~~~  110 (124)
                      |.+|.-|.++.+    |+ ++|||+||||++|++++|++|++++|+|++|+||||+|.+++++          ++|+.++
T Consensus         7 ~~~~~~~~~~~~----~~-~~mrIvf~G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~   81 (329)
T 2bw0_A            7 HSSGVDLGTENL----YF-QSMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRW   81 (329)
T ss_dssp             -------------------CCCEEEEECCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCC
T ss_pred             cccccCcccccc----cC-CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcc
Confidence            456666777553    33 34999999999999999999999899999999999999777765          7888877


Q ss_pred             hc
Q psy16773        111 RV  112 (124)
Q Consensus       111 r~  112 (124)
                      +.
T Consensus        82 ~~   83 (329)
T 2bw0_A           82 RA   83 (329)
T ss_dssp             EE
T ss_pred             cc
Confidence            64

>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A

Probab=99.11  E-value=7.3e-11  Score=95.85  Aligned_cols=40  Identities=40%  Similarity=0.589  Sum_probs=36.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      ++|||+|||||+||.++|++|+++||+|++|+|+||+|.+
T Consensus         2 ~~mrIvf~Gt~~fa~~~L~~L~~~~~~i~~Vvt~pd~p~g   41 (314)
T 1fmt_A            2 ESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG   41 (314)
T ss_dssp             CCCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCCCBC--
T ss_pred             CCCEEEEEecCHHHHHHHHHHHHCCCcEEEEEeCCCCccc
Confidence            4599999999999999999999999999999999999864

>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A

Probab=98.90  E-value=1.1e-09  Score=88.55  Aligned_cols=38  Identities=16%  Similarity=0.269  Sum_probs=33.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |||+|||||+||.++|++|++++|+|++|+||||+|.+
T Consensus         1 mrivf~gt~~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g   38 (305)
T 2bln_A            1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGE   38 (305)
T ss_dssp             CEEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC----
T ss_pred             CEEEEEEcCHHHHHHHHHHHHCCCcEEEEEcCCCCCCC
Confidence            79999999999999999999999999999999999864

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.61  E-value=2.7e-08  Score=84.59  Aligned_cols=38  Identities=16%  Similarity=0.269  Sum_probs=33.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |||+|||||+||.++|++|++++|+|++|+|+||+|.+
T Consensus         1 ~ri~~~~s~~~~~~~l~~l~~~~~~i~~v~t~~~~~~~   38 (660)
T 1z7e_A            1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGE   38 (660)
T ss_dssp             CEEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC----
T ss_pred             CEEEEEEeCHHHHHHHHHHHhCCCCEEEEEeCCCCCcc
Confidence            79999999999999999999999999999999999863

>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}

Probab=97.84  E-value=2.4e-05  Score=60.23  Aligned_cols=36  Identities=22%  Similarity=0.284  Sum_probs=33.1

Q ss_pred             ceEEEE--cCCHHHHHHHHHHHhCCC--eEEEEEcCCCCC
Q psy16773         62 LRVAVI--GQSSFAAEVYKLLKKNGH--SVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFm--GTp~FAa~iLeeLl~~gh--eVvgVVTqPDKP   97 (124)
                      |||+||  |+|.++.++|++|.+.++  +|++|+|++|++
T Consensus         2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~   41 (216)
T 2ywr_A            2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKA   41 (216)
T ss_dssp             EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTC
T ss_pred             CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCh
Confidence            799999  999999999999988777  999999998876

>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}

Probab=97.73  E-value=4.3e-05  Score=59.76  Aligned_cols=37  Identities=16%  Similarity=0.192  Sum_probs=32.5

Q ss_pred             CceEEEE--cCCHHHHHHHHHHHhC--CCeEEEEEcCCCCC
Q psy16773         61 DLRVAVI--GQSSFAAEVYKLLKKN--GHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFm--GTp~FAa~iLeeLl~~--gheVvgVVTqPDKP   97 (124)
                      +|||+||  |+|.++.++|++|.+.  +++|++|+|++|++
T Consensus        22 ~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~   62 (229)
T 3auf_A           22 MIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADA   62 (229)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTC
T ss_pred             CcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCch
Confidence            4799999  9999999999999876  57999999997654

>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}

Probab=97.43  E-value=8.9e-05  Score=56.96  Aligned_cols=36  Identities=17%  Similarity=0.057  Sum_probs=30.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTqPDKP   97 (124)
                      +.|+|+|+|.++.++|++|.+.  +++|++|+|+++++
T Consensus         6 i~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~   43 (212)
T 3av3_A            6 LAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGA   43 (212)
T ss_dssp             EEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTC
T ss_pred             EEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCc
Confidence            4556779999999999999876  68999999997644

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.04  E-value=0.001  Score=49.83  Aligned_cols=35  Identities=29%  Similarity=0.308  Sum_probs=32.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||++.|. |-+|..+.++|+++||+|+++.++|++
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~   36 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP   36 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            89999997 999999999999999999999988764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=96.95  E-value=0.0013  Score=48.85  Aligned_cols=36  Identities=19%  Similarity=0.334  Sum_probs=33.3

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +|||++.|+|.+|..+.++|+++||+|+++...+++
T Consensus         3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~   38 (286)
T 3gpi_A            3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP   38 (286)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            479999999999999999999999999999998765

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.92  E-value=0.00098  Score=46.99  Aligned_cols=36  Identities=19%  Similarity=0.438  Sum_probs=32.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~   37 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI   37 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh
Confidence            78999995 9999999999999999999999987653

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.91  E-value=0.0013  Score=45.81  Aligned_cols=44  Identities=20%  Similarity=0.198  Sum_probs=33.3

Q ss_pred             CccCCCC--CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         54 SSQIHKC--DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        54 ~~~M~~k--~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |-+|+..  .++|+++|.|.+|..+.+.|.+.|++|+++-..+++.
T Consensus        10 ~~~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~   55 (155)
T 2g1u_A           10 HHHMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAF   55 (155)
T ss_dssp             -------CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGG
T ss_pred             hhhhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            3346553  4799999999999999999999999999998877764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.78  E-value=0.0015  Score=48.22  Aligned_cols=35  Identities=17%  Similarity=0.218  Sum_probs=32.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||++.|+|.+|..+.++|+++||+|+++...+++
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~   40 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQ   40 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGG
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhh
Confidence            79999999999999999999999999999988764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.65  E-value=0.0028  Score=45.41  Aligned_cols=38  Identities=11%  Similarity=0.253  Sum_probs=33.9

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |||++.| ||.+|..+.++|+++||+|+++...+++...
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~   39 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ   39 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh
Confidence            6899999 5999999999999999999999999876543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.64  E-value=0.0017  Score=42.83  Aligned_cols=36  Identities=19%  Similarity=0.251  Sum_probs=30.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .|||+++|.|.+|..+.+.|.+.|++|+.+-..+++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~   39 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDI   39 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            489999999999999999999999999988765543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.55  E-value=0.0042  Score=46.74  Aligned_cols=39  Identities=23%  Similarity=0.174  Sum_probs=32.2

Q ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         58 HKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        58 ~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+..|||++.|. |.+|..+.++|+++||+|+++...+++
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   50 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSS   50 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            345689999997 999999999999999999999987764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.48  E-value=0.0048  Score=42.78  Aligned_cols=36  Identities=11%  Similarity=0.141  Sum_probs=33.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |+|++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~   40 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL   40 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc
Confidence            89999998 9999999999999999999999887754

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.47  E-value=0.004  Score=45.11  Aligned_cols=39  Identities=26%  Similarity=0.357  Sum_probs=33.6

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+.|||++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~   58 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG   58 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH
Confidence            34689999997 9999999999999999999999887653

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.42  E-value=0.0026  Score=45.20  Aligned_cols=36  Identities=25%  Similarity=0.464  Sum_probs=32.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~   37 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA   37 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence            78999997 9999999999999999999999887653

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=96.38  E-value=0.0062  Score=45.98  Aligned_cols=36  Identities=25%  Similarity=0.267  Sum_probs=32.1

Q ss_pred             CceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .|+|++.| +|.+|..+.++|+++||+|++++..+++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~   45 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDN   45 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcch
Confidence            47899999 5999999999999999999999887764

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.33  E-value=0.0035  Score=44.72  Aligned_cols=38  Identities=16%  Similarity=0.230  Sum_probs=33.8

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .|||++.|. |.+|..+.++|+++||+|+++...+++..
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   42 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK   42 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch
Confidence            379999995 99999999999999999999999887653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=96.29  E-value=0.0038  Score=40.03  Aligned_cols=37  Identities=19%  Similarity=0.192  Sum_probs=32.4

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCC-CeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNG-HSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~g-heVvgVVTqPDKP   97 (124)
                      .|||+++|.|.+|..+.+.|.++| ++|+++-.++++.
T Consensus         5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~   42 (118)
T 3ic5_A            5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAAL   42 (118)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHH
T ss_pred             cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHH
Confidence            378999999999999999999999 9999888777643

>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*

Probab=96.22  E-value=0.0037  Score=48.61  Aligned_cols=37  Identities=19%  Similarity=0.124  Sum_probs=29.7

Q ss_pred             CceEEEE--cCCHHHHHHHHHHHh-CCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVI--GQSSFAAEVYKLLKK-NGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFm--GTp~FAa~iLeeLl~-~gheVvgVVTqPDKP   97 (124)
                      +|||+||  |+|.....+++++.+ .+++|++|+|++|++
T Consensus        12 ~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a~   51 (215)
T 3da8_A           12 PARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECR   51 (215)
T ss_dssp             SEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCCH
T ss_pred             CcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCchH
Confidence            4899999  889988888887643 135999999999955

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.20  E-value=0.0059  Score=42.88  Aligned_cols=37  Identities=11%  Similarity=0.045  Sum_probs=32.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCC--eEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGH--SVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gh--eVvgVVTqPDK   96 (124)
                      ..|||++.|. |.+|..+.++|+++|+  +|+++...+++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~   43 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA   43 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence            3579999995 9999999999999998  99999888775

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.19  E-value=0.0043  Score=47.10  Aligned_cols=40  Identities=13%  Similarity=0.101  Sum_probs=34.6

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |..+.|||++.|. |.+|..++++|+++||+|+++...+++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   61 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTG   61 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence            4445689999995 999999999999999999999987764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.19  E-value=0.0098  Score=44.69  Aligned_cols=38  Identities=16%  Similarity=0.343  Sum_probs=33.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +.|||++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   50 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI   50 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh
Confidence            3479999996 9999999999999999999999887653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.18  E-value=0.0036  Score=42.40  Aligned_cols=35  Identities=23%  Similarity=0.294  Sum_probs=31.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|+++|.|.+|..+.+.|.++||+|+++-.+|++
T Consensus         7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~   41 (141)
T 3llv_A            7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEK   41 (141)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            58999999999999999999999999999887764

>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0

Probab=96.13  E-value=0.0081  Score=46.69  Aligned_cols=41  Identities=15%  Similarity=0.264  Sum_probs=31.0

Q ss_pred             CCCCCceEEEE--cCCHHHHHHHHHHHhC-CCeEEEEEcCCCCC
Q psy16773         57 IHKCDLRVAVI--GQSSFAAEVYKLLKKN-GHSVVGVFTVVDKA   97 (124)
Q Consensus        57 M~~k~MKIVFm--GTp~FAa~iLeeLl~~-gheVvgVVTqPDKP   97 (124)
                      |+.+++||+++  |+|.....++++..+. +++|++|+|+++++
T Consensus         1 ~~~~~~riavl~SG~Gsnl~all~~~~~~~~~eI~~Vis~~~~a   44 (215)
T 3tqr_A            1 MNREPLPIVVLISGNGTNLQAIIGAIQKGLAIEIRAVISNRADA   44 (215)
T ss_dssp             ---CCEEEEEEESSCCHHHHHHHHHHHTTCSEEEEEEEESCTTC
T ss_pred             CCCCCcEEEEEEeCCcHHHHHHHHHHHcCCCCEEEEEEeCCcch
Confidence            44567999999  7789888888877552 58999999987655

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.13  E-value=0.0082  Score=45.47  Aligned_cols=38  Identities=18%  Similarity=0.213  Sum_probs=31.8

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+.|+|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   55 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG   55 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence            34589999998 999999999999999999999988865

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.98  E-value=0.017  Score=45.02  Aligned_cols=41  Identities=20%  Similarity=0.300  Sum_probs=35.4

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |..+.|+|++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   66 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH   66 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc
Confidence            5555589999998 9999999999999999999999887653

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.97  E-value=0.013  Score=43.75  Aligned_cols=39  Identities=15%  Similarity=0.193  Sum_probs=31.9

Q ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         58 HKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        58 ~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.+.++|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   48 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA   48 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc
Confidence            445688999987 999999999999999999999887764

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=95.93  E-value=0.0051  Score=48.02  Aligned_cols=35  Identities=23%  Similarity=0.392  Sum_probs=30.1

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .|||.|+|.|.+|..+...|.++||+|..+-..++
T Consensus        14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~   48 (335)
T 1z82_A           14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKE   48 (335)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            49999999999999999999999999976655443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.92  E-value=0.0095  Score=44.86  Aligned_cols=33  Identities=15%  Similarity=0.128  Sum_probs=30.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|++.|. |.+|..+.++|+++||+|.++...++
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~   46 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS   46 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred             eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence            8999995 99999999999999999999988875

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=95.91  E-value=0.0065  Score=45.88  Aligned_cols=37  Identities=16%  Similarity=0.223  Sum_probs=29.0

Q ss_pred             cCCCCCceEEEEcCCHHHHHHHHHHHhC-----C-CeEEEEEc
Q psy16773         56 QIHKCDLRVAVIGQSSFAAEVYKLLKKN-----G-HSVVGVFT   92 (124)
Q Consensus        56 ~M~~k~MKIVFmGTp~FAa~iLeeLl~~-----g-heVvgVVT   92 (124)
                      -|+..+|||.|+|.|.+|..+...|.+.     | |+|..+-.
T Consensus         3 ~m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r   45 (317)
T 2qyt_A            3 AMNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR   45 (317)
T ss_dssp             ----CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred             CCCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence            3666679999999999999998889888     8 99987644

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.90  E-value=0.0037  Score=46.41  Aligned_cols=34  Identities=9%  Similarity=0.104  Sum_probs=29.4

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      ++.|||+|+|+|.+|..+.+.|.+.||+|+.++.
T Consensus        21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~   54 (220)
T 4huj_A           21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANS   54 (220)
T ss_dssp             GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECT
T ss_pred             hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEEC
Confidence            3458999999999999999999999999988443

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.89  E-value=0.0042  Score=45.38  Aligned_cols=36  Identities=17%  Similarity=0.139  Sum_probs=32.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||+++|.|.+|..+.+.|.++||+|+.+-.+|++.
T Consensus         1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~   36 (218)
T 3l4b_C            1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELC   36 (218)
T ss_dssp             CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            789999999999999999999999999998777643

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.86  E-value=0.016  Score=43.57  Aligned_cols=38  Identities=18%  Similarity=0.121  Sum_probs=33.0

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+|+|++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~   42 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSK   42 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcch
Confidence            4589999996 9999999999999999999988776643

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.83  E-value=0.015  Score=45.80  Aligned_cols=40  Identities=18%  Similarity=0.240  Sum_probs=33.9

Q ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         58 HKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        58 ~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ++.+|+|++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~   42 (352)
T 1xgk_A            2 AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL   42 (352)
T ss_dssp             -CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh
Confidence            334588999996 9999999999999999999999887753

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.83  E-value=0.01  Score=44.84  Aligned_cols=37  Identities=16%  Similarity=0.082  Sum_probs=31.4

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.++|++.| +|.+|..+.++|+++||+|++++..+++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   41 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN   41 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch
Confidence            346899999 5999999999999999999999987763

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.82  E-value=0.018  Score=39.79  Aligned_cols=34  Identities=21%  Similarity=0.229  Sum_probs=30.7

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +.+|+++|.|.+|..+.+.|.+.||+|+.|-..+
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~   36 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP   36 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence            4679999999999999999999999999998765

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=95.81  E-value=0.015  Score=43.08  Aligned_cols=35  Identities=26%  Similarity=0.424  Sum_probs=31.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||.|+|.|.+|..+...|.+.||+|..+-..+++
T Consensus         1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~   35 (291)
T 1ks9_A            1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQP   35 (291)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccc
Confidence            68999999999999999999999999888766654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.79  E-value=0.013  Score=44.97  Aligned_cols=35  Identities=11%  Similarity=-0.112  Sum_probs=31.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      .+|||++.|. |.+|..++++|+++||+|.++...+
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~   44 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG   44 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence            3579999997 9999999999999999999999877

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=95.77  E-value=0.021  Score=44.64  Aligned_cols=43  Identities=21%  Similarity=0.298  Sum_probs=37.8

Q ss_pred             ccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         55 SQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        55 ~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+|..+.|||+++|.+..|..+.+++.+.|++|+++...|+.+
T Consensus         5 ~pm~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~~   47 (391)
T 1kjq_A            5 TALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAP   47 (391)
T ss_dssp             CTTSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCG
T ss_pred             CCCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCCc
Confidence            3466677999999999999999999988999999999988865

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.76  E-value=0.0058  Score=49.53  Aligned_cols=42  Identities=17%  Similarity=0.251  Sum_probs=33.3

Q ss_pred             ccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         55 SQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        55 ~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.|.+..|||+|+|+|.+|..+-..|.++||+|..+...+++
T Consensus        23 ~~m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~   64 (356)
T 3k96_A           23 NAMEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDH   64 (356)
T ss_dssp             ----CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHH
T ss_pred             hcccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            346666799999999999999999999999999988776553

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.76  E-value=0.015  Score=44.56  Aligned_cols=37  Identities=16%  Similarity=0.239  Sum_probs=33.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqPDKP   97 (124)
                      .|||++.|. |.+|..++++|+++ ||+|+++...+++.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~   62 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL   62 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh
Confidence            479999995 99999999999998 89999999887754

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.75  E-value=0.0067  Score=45.37  Aligned_cols=34  Identities=15%  Similarity=0.305  Sum_probs=30.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|+|.|.+|..+...|.++||+|..+-..++
T Consensus         4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~   37 (316)
T 2ew2_A            4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPA   37 (316)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence            8999999999999999999999999988766554

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=95.73  E-value=0.012  Score=42.07  Aligned_cols=36  Identities=8%  Similarity=0.113  Sum_probs=31.7

Q ss_pred             ce-EEEEcC-CHHHHHHHHHHH-hCCCeEEEEEcCCC-CC
Q psy16773         62 LR-VAVIGQ-SSFAAEVYKLLK-KNGHSVVGVFTVVD-KA   97 (124)
Q Consensus        62 MK-IVFmGT-p~FAa~iLeeLl-~~gheVvgVVTqPD-KP   97 (124)
                      || |++.|. +.+|..+.++|+ ++||+|+++..+++ +.
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~   44 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI   44 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc
Confidence            56 999994 999999999999 79999999998887 44

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.67  E-value=0.016  Score=42.30  Aligned_cols=37  Identities=16%  Similarity=0.102  Sum_probs=32.7

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCC-CeEEEEEcCCCCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNG-HSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~g-heVvgVVTqPDKP~   98 (124)
                      ++|++.| ++.+|..+.++|+++| ++|+++..++++..
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~   62 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH   62 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc
Confidence            5789999 5999999999999999 89999999887654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.56  E-value=0.026  Score=42.91  Aligned_cols=39  Identities=10%  Similarity=0.282  Sum_probs=33.4

Q ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         58 HKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        58 ~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+.|+|++.|. |.+|..+.++|+++||+|+++...++.
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~   56 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATG   56 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            334589999997 999999999999999999999886543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.56  E-value=0.011  Score=42.55  Aligned_cols=35  Identities=26%  Similarity=0.333  Sum_probs=30.6

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||+++| +|.+|..+.+.|.++||+|..+-..+++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~   36 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            6899999 9999999999999999999887666553

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=95.55  E-value=0.019  Score=42.50  Aligned_cols=35  Identities=14%  Similarity=0.180  Sum_probs=32.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|||++.|. |.+|..+.++|+++||+|+++...++
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            479999998 99999999999999999999988766

>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*

Probab=95.50  E-value=0.023  Score=43.65  Aligned_cols=37  Identities=22%  Similarity=0.200  Sum_probs=26.2

Q ss_pred             ceEEEEcCC--HHHHHHHHHHHhC--CCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQS--SFAAEVYKLLKKN--GHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp--~FAa~iLeeLl~~--gheVvgVVTqPDKP~   98 (124)
                      |||++++||  .....+++++.+.  +++|++|+|++|++.
T Consensus         1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~   41 (212)
T 1jkx_A            1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAF   41 (212)
T ss_dssp             CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCH
T ss_pred             CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCchH
Confidence            589999775  5444555554443  489999999988763

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.49  E-value=0.0096  Score=45.71  Aligned_cols=36  Identities=19%  Similarity=0.089  Sum_probs=30.1

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.|||+++|.|.+|..+...|.+.||+|..+-..++
T Consensus         3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~   38 (359)
T 1bg6_A            3 ESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQ   38 (359)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence            348999999999999999999888999887755444

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=95.49  E-value=0.025  Score=46.75  Aligned_cols=37  Identities=24%  Similarity=0.358  Sum_probs=33.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .|||++.|. |.+|..++++|+++||+|+++...+++.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~  184 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP  184 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc
Confidence            589999995 9999999999999999999999987753

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=95.40  E-value=0.017  Score=39.66  Aligned_cols=36  Identities=11%  Similarity=0.062  Sum_probs=33.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+|+++|.|.+|..+.+.|.+.|++|++|-.+|++.
T Consensus         8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~   43 (140)
T 3fwz_A            8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRV   43 (140)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred             CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            679999999999999999999999999999988754

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.32  E-value=0.021  Score=43.80  Aligned_cols=39  Identities=21%  Similarity=0.279  Sum_probs=31.9

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+..|||+|+|.|.+|..+...|.+.|++|..+-..+++
T Consensus        27 ~~~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~   65 (316)
T 2uyy_A           27 TPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEK   65 (316)
T ss_dssp             CCCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGG
T ss_pred             CCCCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence            334589999999999999999999999998766555554

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.30  E-value=0.018  Score=45.47  Aligned_cols=38  Identities=21%  Similarity=0.228  Sum_probs=29.2

Q ss_pred             cCCCCCceEEEEcCCHHHH-HHHHHHHhC-CCeEEEEEcC
Q psy16773         56 QIHKCDLRVAVIGQSSFAA-EVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        56 ~M~~k~MKIVFmGTp~FAa-~iLeeLl~~-gheVvgVVTq   93 (124)
                      .|++++|||+++|.|.+|. ..++.|.+. +++|++|+..
T Consensus        22 ~~~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~   61 (350)
T 3rc1_A           22 PANANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR   61 (350)
T ss_dssp             ----CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES
T ss_pred             CCCCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC
Confidence            3555779999999999998 688888775 6899998753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.30  E-value=0.027  Score=41.94  Aligned_cols=36  Identities=25%  Similarity=0.208  Sum_probs=32.6

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCC-CeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNG-HSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~g-heVvgVVTqPDK   96 (124)
                      +|+|++.|. |.+|..+.++|+++| |+|.++...|++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~   42 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRK   42 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCC
Confidence            478999997 999999999999988 999999998875

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.27  E-value=0.013  Score=43.40  Aligned_cols=36  Identities=22%  Similarity=0.272  Sum_probs=30.8

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .|||+|+|+|.+|..+.+.|.+.||+|.++-..+++
T Consensus        28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~   63 (215)
T 2vns_A           28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKR   63 (215)
T ss_dssp             -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHH
T ss_pred             CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            379999999999999999999999999887666553

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.26  E-value=0.013  Score=45.26  Aligned_cols=36  Identities=19%  Similarity=0.229  Sum_probs=30.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++|||.|+|.|.+|..+...|.+.||+|.+.-..++
T Consensus         6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~   41 (303)
T 3g0o_A            6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ   41 (303)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            458999999999999999999999999987755543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.26  E-value=0.022  Score=42.15  Aligned_cols=37  Identities=11%  Similarity=0.088  Sum_probs=33.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqPDKP~   98 (124)
                      |||++.|. |.+|..++++|.++ |++|+++...+++..
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~   39 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP   39 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHH
Confidence            68999995 99999999999887 899999999987654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.25  E-value=0.03  Score=41.76  Aligned_cols=36  Identities=25%  Similarity=0.215  Sum_probs=32.2

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .|+|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   39 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE   39 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            478999997 999999999999999999999887764

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=95.23  E-value=0.025  Score=44.87  Aligned_cols=37  Identities=16%  Similarity=0.300  Sum_probs=30.1

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      |+++++||+++|.|.+|...++.|.+. +++|+||+..
T Consensus         1 M~m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~   38 (359)
T 3e18_A            1 MSLKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI   38 (359)
T ss_dssp             --CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS
T ss_pred             CCCCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC
Confidence            556779999999999999999888765 6899998753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.22  E-value=0.036  Score=41.51  Aligned_cols=35  Identities=20%  Similarity=0.351  Sum_probs=31.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||++.|. |.+|..++++|+++||+|+++...+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   38 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN   38 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc
Confidence            78999995 999999999999999999999988554

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.21  E-value=0.026  Score=42.06  Aligned_cols=36  Identities=25%  Similarity=0.202  Sum_probs=31.9

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.|+|++.|. |.+|..+.++|+++||+|+++...++
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~   46 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSAS   46 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            4579999998 99999999999999999999987654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.21  E-value=0.026  Score=41.97  Aligned_cols=35  Identities=17%  Similarity=0.213  Sum_probs=31.1

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|+|++.|. |.+|..++++|+++||+|+++...++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~   39 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV   39 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCc
Confidence            478999995 99999999999999999999888754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=95.20  E-value=0.03  Score=41.59  Aligned_cols=35  Identities=23%  Similarity=0.259  Sum_probs=31.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSG   36 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence            68999998 999999999999999999999876654

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=95.19  E-value=0.034  Score=44.44  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=35.7

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |..+.|||+++|.+..|..+++++.+.|++|+++...|+.+
T Consensus        15 ~~~~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~~~   55 (433)
T 2dwc_A           15 TTDSAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANAP   55 (433)
T ss_dssp             TSTTCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTTCH
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh
Confidence            44445899999999999999999999999999999988764

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.19  E-value=0.012  Score=44.55  Aligned_cols=36  Identities=17%  Similarity=0.201  Sum_probs=29.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++|||+|+|.|.+|..+.+.|.+.||+|..+-..++
T Consensus         3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~   38 (301)
T 3cky_A            3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA   38 (301)
T ss_dssp             -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            458999999999999999999998999876544443

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.18  E-value=0.039  Score=38.76  Aligned_cols=35  Identities=14%  Similarity=0.238  Sum_probs=30.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++|||++.|. +.+|..+.++|+ +|++|+++...++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~   37 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG   37 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc
Confidence            3589999997 999999999999 9999999887654

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.15  E-value=0.024  Score=43.12  Aligned_cols=35  Identities=26%  Similarity=0.202  Sum_probs=30.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||.|+|.|.+|..+...|.+.||+|++.-..+++
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEK   36 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            89999999999999999999999999877666554

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.10  E-value=0.029  Score=41.62  Aligned_cols=35  Identities=20%  Similarity=0.194  Sum_probs=30.9

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|+|++.|. |.+|..++++|+++||+|.++...+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~   39 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST   39 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcc
Confidence            378999996 99999999999999999998877654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.09  E-value=0.029  Score=43.54  Aligned_cols=36  Identities=22%  Similarity=0.213  Sum_probs=31.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .|||.|+|.|.+|..+...|.+.||+|.+.-..+++
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~   56 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            389999999999999999999999999887666654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.09  E-value=0.02  Score=44.23  Aligned_cols=37  Identities=14%  Similarity=0.136  Sum_probs=32.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +|||.|+|.|.+|..+...|.+.||+|.++-..+++.
T Consensus        15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~   51 (296)
T 3qha_A           15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAM   51 (296)
T ss_dssp             CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred             CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            4899999999999999999999999999887777654

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=95.07  E-value=0.028  Score=43.30  Aligned_cols=37  Identities=19%  Similarity=0.357  Sum_probs=27.7

Q ss_pred             CCCCCceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVTq   93 (124)
                      |++++|||+++|.|.+|.. .++.|.+. ++++++|+..
T Consensus         1 m~m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~   39 (319)
T 1tlt_A            1 MSLKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP   39 (319)
T ss_dssp             ----CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS
T ss_pred             CCCCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC
Confidence            4556799999999999997 88887763 6899988764

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=95.06  E-value=0.017  Score=43.35  Aligned_cols=34  Identities=15%  Similarity=0.227  Sum_probs=28.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||+|+|.|.+|..+...|.+.||+|..+- .+++
T Consensus         4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~   37 (295)
T 1yb4_A            4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPV   37 (295)
T ss_dssp             CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCC
T ss_pred             CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHH
Confidence            899999999999999999999999997554 4443

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.05  E-value=0.018  Score=44.92  Aligned_cols=37  Identities=11%  Similarity=0.211  Sum_probs=30.1

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      |++++|||+++|.|.+|...++.|.+. +++|++|+..
T Consensus         1 M~m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~   38 (330)
T 3e9m_A            1 MSLDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR   38 (330)
T ss_dssp             --CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS
T ss_pred             CCCCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC
Confidence            455679999999999999999998874 6899988753

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.02  E-value=0.053  Score=40.40  Aligned_cols=34  Identities=21%  Similarity=0.420  Sum_probs=29.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|+|.|.+|....+.|.+.|+++++|+-..+
T Consensus         1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~   34 (236)
T 2dc1_A            1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG   34 (236)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc
Confidence            6899999999999999999888999998876443

>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}

Probab=95.01  E-value=0.041  Score=37.20  Aligned_cols=35  Identities=11%  Similarity=0.208  Sum_probs=30.1

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTqP   94 (124)
                      ++.|++++|+|..|..+++.|.++ ||+|+|++...
T Consensus         3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~   38 (141)
T 3nkl_A            3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDD   38 (141)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECC
Confidence            446899999999999999998765 79999999754

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=94.98  E-value=0.039  Score=40.74  Aligned_cols=36  Identities=11%  Similarity=0.198  Sum_probs=30.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..|||+|+|.|.+|..+...|.+.||+|..+-..++
T Consensus        18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~   53 (209)
T 2raf_A           18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ   53 (209)
T ss_dssp             --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            458999999999999999999999999988766555

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.95  E-value=0.052  Score=41.34  Aligned_cols=37  Identities=22%  Similarity=0.145  Sum_probs=33.1

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .|+|++.|. |.+|..+.++|+++||+|+++...+++.
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   46 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV   46 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc
Confidence            479999996 9999999999999999999999887654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.95  E-value=0.021  Score=43.87  Aligned_cols=41  Identities=29%  Similarity=0.268  Sum_probs=32.0

Q ss_pred             ccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         55 SQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        55 ~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |.|....+||+|+|.|.+|..+...|.+.||+|+.+-..++
T Consensus         9 ~~~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~   49 (302)
T 1f0y_A            9 SAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED   49 (302)
T ss_dssp             ---CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ccccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            44655556899999999999999999999999987766554

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=94.92  E-value=0.017  Score=40.78  Aligned_cols=38  Identities=18%  Similarity=0.337  Sum_probs=33.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTqPDKP   97 (124)
                      ..++|+++|.|.+|..+.+.|.+. |++|+++-..+++.
T Consensus        38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~   76 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAA   76 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHH
Confidence            357899999999999999999998 99999998877653

>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}

Probab=94.92  E-value=0.031  Score=43.82  Aligned_cols=33  Identities=15%  Similarity=0.398  Sum_probs=28.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      +++||+++|.|.+|...++.|.+. +++|+||+.
T Consensus         8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d   41 (304)
T 3bio_A            8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVR   41 (304)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEc
Confidence            569999999999999999988764 689999875

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=94.89  E-value=0.017  Score=38.03  Aligned_cols=35  Identities=34%  Similarity=0.466  Sum_probs=30.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|+++|.|.+|..+.+.|.+.|++|+.+-..+++
T Consensus         7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~   41 (144)
T 2hmt_A            7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEK   41 (144)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHH
T ss_pred             CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            46999999999999999999999999888766554

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=94.89  E-value=0.038  Score=42.95  Aligned_cols=37  Identities=16%  Similarity=0.208  Sum_probs=28.3

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      |++++|||+++|.|.+|...++.|.+. +.+|++|+..
T Consensus         1 M~m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~   38 (329)
T 3evn_A            1 MSLSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR   38 (329)
T ss_dssp             ----CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS
T ss_pred             CCCCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC
Confidence            455679999999999999999888764 5789998754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=94.89  E-value=0.02  Score=45.12  Aligned_cols=39  Identities=15%  Similarity=0.324  Sum_probs=32.8

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHh-CCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKK-NGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~-~gheVvgVVTqPD   95 (124)
                      |++++|||+++|. |.+|..+++.+.+ .+++++|++..++
T Consensus         1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~   41 (273)
T 1dih_A            1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG   41 (273)
T ss_dssp             -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred             CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence            5667799999997 9999999998875 5799999988765

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=94.88  E-value=0.029  Score=39.85  Aligned_cols=36  Identities=25%  Similarity=0.233  Sum_probs=31.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhC--CCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKN--GHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~--gheVvgVVTqPDK   96 (124)
                      .|+|++.|. |.+|..+.++|+++  ||+|+++...+++
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~   42 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG   42 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc
Confidence            478999995 99999999999998  8999999887653

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.86  E-value=0.023  Score=43.15  Aligned_cols=35  Identities=14%  Similarity=0.339  Sum_probs=29.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .|||+|+|. |.+|..+.+.|.+.||+|+++-..++
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~   46 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPE   46 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            379999999 99999999999999999986654443

>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}

Probab=94.83  E-value=0.038  Score=43.77  Aligned_cols=37  Identities=14%  Similarity=0.184  Sum_probs=29.2

Q ss_pred             CCCCCceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVTq   93 (124)
                      |++++|||+++|.|.+|.. .++.|.+. +.+|++|+..
T Consensus         1 M~M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~   39 (359)
T 3m2t_A            1 MSLSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS   39 (359)
T ss_dssp             --CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS
T ss_pred             CCCCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC
Confidence            5567799999999999996 77887764 6899998754

>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}

Probab=94.82  E-value=0.018  Score=44.48  Aligned_cols=37  Identities=24%  Similarity=0.324  Sum_probs=27.3

Q ss_pred             CceEE--EEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCCC
Q psy16773         61 DLRVA--VIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIV--FmGTp~FAa~iLeeLl~~g--heVvgVVTqPDKP   97 (124)
                      ++||+  +.|+|.....+|+++.+.+  ++|++|+|+.+..
T Consensus         7 ~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a   47 (209)
T 4ds3_A            7 RNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEA   47 (209)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTC
T ss_pred             CccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCccc
Confidence            35555  4577999999999886543  6999999975433

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=94.82  E-value=0.035  Score=41.66  Aligned_cols=33  Identities=6%  Similarity=-0.003  Sum_probs=30.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |+|++.|. |.+|..++++|+++||+|.++...+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~   38 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL   38 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence            78999995 9999999999999999999988876

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=94.78  E-value=0.016  Score=43.70  Aligned_cols=34  Identities=26%  Similarity=0.242  Sum_probs=28.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|+|.|.+|..+...|.+.||+|..+-..++
T Consensus         6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~   39 (299)
T 1vpd_A            6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE   39 (299)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence            7999999999999999999998999866544443

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=94.74  E-value=0.068  Score=41.01  Aligned_cols=39  Identities=8%  Similarity=-0.014  Sum_probs=33.3

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHh--CCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKK--NGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~--~gheVvgVVTqPD   95 (124)
                      |..+.|+|++.|. |.+|..+.++|++  +||+|+++...++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            3445689999976 9999999999999  8999999988665

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=94.73  E-value=0.058  Score=40.95  Aligned_cols=36  Identities=19%  Similarity=0.215  Sum_probs=31.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.|+|++.|. |.+|..+.++|+++||+|+++...++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   62 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT   62 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence            3478999997 99999999999999999999987654

>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*

Probab=94.72  E-value=0.042  Score=42.15  Aligned_cols=37  Identities=16%  Similarity=0.066  Sum_probs=24.7

Q ss_pred             ceEEEEcC--CHHHHHHHHHHHhC--CCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQ--SSFAAEVYKLLKKN--GHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGT--p~FAa~iLeeLl~~--gheVvgVVTqPDKP~   98 (124)
                      +||+++.+  |..-..+++++.+.  +++|++|+|+||++.
T Consensus         1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~   41 (209)
T 1meo_A            1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVA   41 (209)
T ss_dssp             CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCH
T ss_pred             CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChH
Confidence            47888755  55444444443322  689999999999874

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=94.72  E-value=0.022  Score=42.72  Aligned_cols=34  Identities=24%  Similarity=0.465  Sum_probs=29.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|+|.|.+|..+...|.+.||+|.++-..++
T Consensus         1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~   34 (279)
T 2f1k_A            1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQS   34 (279)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            6899999999999999999999999887755443

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=94.69  E-value=0.02  Score=42.61  Aligned_cols=35  Identities=20%  Similarity=0.390  Sum_probs=28.3

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|||+|+|.|.+|..+.+.|.+.|++|..+-..++
T Consensus         3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~   37 (259)
T 2ahr_A            3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLE   37 (259)
T ss_dssp             CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHH
T ss_pred             ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHH
Confidence            38999999999999999999888888755444433

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=94.67  E-value=0.034  Score=44.16  Aligned_cols=42  Identities=14%  Similarity=0.097  Sum_probs=26.0

Q ss_pred             CCCCccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         51 GSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        51 ~s~~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +.+|+.|..++|||+++|+|.+|..+.+.|.+ .++|..+-..
T Consensus         6 ~~~~~~~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~   47 (365)
T 3abi_A            6 HHHHHHIEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVN   47 (365)
T ss_dssp             ----------CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESC
T ss_pred             ccccccccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcC
Confidence            34555688889999999999999999888755 5887655443

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=94.67  E-value=0.058  Score=42.17  Aligned_cols=35  Identities=26%  Similarity=0.561  Sum_probs=30.4

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|||+++|.|.+|..+.+.+.++++++++++...+
T Consensus         3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            38999999999999999999887679999887643

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=94.66  E-value=0.035  Score=41.09  Aligned_cols=36  Identities=3%  Similarity=0.114  Sum_probs=30.1

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCC----CeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNG----HSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~g----heVvgVVTqPDK   96 (124)
                      .|||.|+|.|.+|..+...|.++|    |+|..+-..+++
T Consensus         4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~   43 (262)
T 2rcy_A            4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN   43 (262)
T ss_dssp             SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred             CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence            589999999999999999998888    788766555553

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=94.63  E-value=0.029  Score=42.15  Aligned_cols=37  Identities=19%  Similarity=0.208  Sum_probs=32.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..|||.|+|+|.+|..+...|.+.||+|...-..+++
T Consensus        18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            3589999999999999999999999999888777765

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=94.63  E-value=0.038  Score=44.21  Aligned_cols=42  Identities=19%  Similarity=0.085  Sum_probs=33.9

Q ss_pred             cCCCCCceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         56 QIHKCDLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        56 ~M~~k~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      .|.+++|||+++|+|.+|..+...|..+|| +|+.+-..+++.
T Consensus         4 ~~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~   46 (331)
T 1pzg_A            4 ALVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   46 (331)
T ss_dssp             CCCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             CcCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHH
Confidence            477778999999999999998888888888 976666655543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=94.60  E-value=0.014  Score=48.89  Aligned_cols=38  Identities=11%  Similarity=0.170  Sum_probs=33.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +.|||+++|.|.+|..+.+.|.++||+|+.|=..|++-
T Consensus         2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~   39 (461)
T 4g65_A            2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRL   39 (461)
T ss_dssp             CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHH
T ss_pred             CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            46999999999999999999988899999887777654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=94.58  E-value=0.045  Score=40.80  Aligned_cols=35  Identities=26%  Similarity=0.240  Sum_probs=28.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |+|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   38 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR   38 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC
Confidence            78999997 999999999999999999998865543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=94.58  E-value=0.039  Score=42.09  Aligned_cols=36  Identities=17%  Similarity=0.135  Sum_probs=31.9

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.|+|++.|. |.+|..+.++|+++||+|+++...++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   62 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT   62 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence            4478999998 99999999999999999999987664

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=94.55  E-value=0.043  Score=42.92  Aligned_cols=36  Identities=19%  Similarity=0.384  Sum_probs=30.3

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTV   93 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTq   93 (124)
                      .+++|||+++|.|.+|...++.|.+.  +++|++|+..
T Consensus        10 ~~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~   47 (354)
T 3q2i_A           10 TDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDI   47 (354)
T ss_dssp             CSSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS
T ss_pred             CCCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC
Confidence            34568999999999999999998875  6899998753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=94.55  E-value=0.056  Score=41.93  Aligned_cols=37  Identities=22%  Similarity=0.251  Sum_probs=32.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCC-CeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNG-HSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~g-heVvgVVTqPDK   96 (124)
                      +.|+|++.|. |.+|..+.++|+++| |+|+++...+++
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   69 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSA   69 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCC
Confidence            3478999996 999999999999999 999999877654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=94.53  E-value=0.057  Score=40.38  Aligned_cols=35  Identities=20%  Similarity=0.254  Sum_probs=31.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqPDK   96 (124)
                      |||++.|. |.+|..+.++|+++ ||+|+++...+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~   37 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA   37 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcch
Confidence            68999997 99999999999998 8999999987765

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.49  E-value=0.042  Score=40.99  Aligned_cols=32  Identities=28%  Similarity=0.562  Sum_probs=27.2

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      .|||+|+|.|.+|..+.+.|.+.||+++.++.
T Consensus        10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~   41 (266)
T 3d1l_A           10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYS   41 (266)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEe
Confidence            48999999999999999999888999555553

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=94.48  E-value=0.037  Score=40.98  Aligned_cols=33  Identities=9%  Similarity=0.207  Sum_probs=30.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |+|++.|. |.+|..++++|+++||+|+++...+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~   36 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKT   36 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence            68999996 9999999999999999999988876

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=94.46  E-value=0.072  Score=39.83  Aligned_cols=34  Identities=24%  Similarity=0.215  Sum_probs=30.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||++.|. |.+|..+.++|+++||+|+++...++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQT   36 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence            78999986 99999999999999999999876554

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.45  E-value=0.026  Score=45.93  Aligned_cols=37  Identities=24%  Similarity=0.374  Sum_probs=31.0

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++.|||.|+|.|.+|..+...|.+.||+|++.-..++
T Consensus        20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~   56 (358)
T 4e21_A           20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN   56 (358)
T ss_dssp             --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence            4558999999999999999999999999987765554

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=94.43  E-value=0.017  Score=45.30  Aligned_cols=34  Identities=21%  Similarity=0.296  Sum_probs=29.2

Q ss_pred             c-eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 L-RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 M-KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      | ||+|+|.|.+|..+...|.++||+|..+-..++
T Consensus        15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~   49 (366)
T 1evy_A           15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEE   49 (366)
T ss_dssp             EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHH
T ss_pred             cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            5 999999999999999999988999987755543

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=94.43  E-value=0.05  Score=41.44  Aligned_cols=34  Identities=24%  Similarity=0.241  Sum_probs=25.7

Q ss_pred             CceEEEEcCCHHHH-----HHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAA-----EVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa-----~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|||+|+..|..|-     ++-++|.++||+|+- +|.++
T Consensus        22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~-~t~~~   60 (400)
T 4amg_A           22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRY-ATGGD   60 (400)
T ss_dssp             CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEE-EECSS
T ss_pred             CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEE-EeCcc
Confidence            59999998876654     566788899999974 45443

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=94.41  E-value=0.039  Score=43.12  Aligned_cols=35  Identities=14%  Similarity=0.228  Sum_probs=28.2

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTq   93 (124)
                      +..|||.|+|.|.+|..+...|.+.|| +|.+.-..
T Consensus        22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~   57 (312)
T 3qsg_A           22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA   57 (312)
T ss_dssp             ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred             CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence            345899999999999999999999999 88766554

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=94.40  E-value=0.077  Score=40.34  Aligned_cols=35  Identities=23%  Similarity=0.371  Sum_probs=31.1

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .|+|++.|. |.+|..+.++|+++||+|+++...++
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~   56 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT   56 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence            378999985 99999999999999999999987754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=94.37  E-value=0.073  Score=38.14  Aligned_cols=38  Identities=13%  Similarity=0.035  Sum_probs=33.2

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCC--eEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGH--SVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gh--eVvgVVTqPDKP   97 (124)
                      +.|+|++.|. +.+|..+.++|+++|+  +|+++...+++.
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~   57 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF   57 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc
Confidence            3478999995 9999999999999999  999999888754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=94.21  E-value=0.061  Score=40.65  Aligned_cols=38  Identities=5%  Similarity=0.141  Sum_probs=29.3

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCC--CeEEEEEcCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNG--HSVVGVFTVV   94 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~g--heVvgVVTqP   94 (124)
                      |.++.|||++.|. |.+|..++++|+++|  ++|+++-..+
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~   60 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT   60 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence            3345689999998 999999999999988  6777776654

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=94.13  E-value=0.034  Score=46.83  Aligned_cols=40  Identities=23%  Similarity=0.248  Sum_probs=33.4

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +-.+|||+++|.|.+|.+.-..|.+.||+|+++-..+++.
T Consensus         5 ~~~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v   44 (478)
T 2y0c_A            5 HHGSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKI   44 (478)
T ss_dssp             --CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             cCCCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            3356999999999999999999999999999997766543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=94.08  E-value=0.092  Score=40.43  Aligned_cols=35  Identities=14%  Similarity=0.143  Sum_probs=31.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~   64 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN   64 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence            47999997 999999999999999999999887764

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=94.06  E-value=0.034  Score=41.89  Aligned_cols=34  Identities=24%  Similarity=0.263  Sum_probs=29.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||.|+|.|.+|..+.+.|.+.||+|..+-..++
T Consensus         1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~   34 (296)
T 2gf2_A            1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD   34 (296)
T ss_dssp             CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred             CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            6899999999999999999999999886655554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=94.06  E-value=0.11  Score=37.20  Aligned_cols=35  Identities=29%  Similarity=0.481  Sum_probs=30.8

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +|++.|. +.+|..+.++|+++|++|+++...+++.
T Consensus         3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~   38 (255)
T 2dkn_A            3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADI   38 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc
Confidence            6888887 9999999999999999999998877643

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=94.04  E-value=0.057  Score=42.26  Aligned_cols=37  Identities=22%  Similarity=0.289  Sum_probs=29.7

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCC----CeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNG----HSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~g----heVvgVVTqPD   95 (124)
                      ++.|||.|+|.|.+|..+...|.+.|    |+|..+-..++
T Consensus        20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~   60 (322)
T 2izz_A           20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD   60 (322)
T ss_dssp             --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence            44589999999999999999999988    88876654443

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=94.04  E-value=0.068  Score=39.66  Aligned_cols=28  Identities=36%  Similarity=0.461  Sum_probs=26.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVG   89 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvg   89 (124)
                      |||.|+|.|.+|..+...|.+.||+|.+
T Consensus         1 M~I~iIG~G~mG~~la~~l~~~g~~V~~   28 (264)
T 1i36_A            1 LRVGFIGFGEVAQTLASRLRSRGVEVVT   28 (264)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCEEEE
T ss_pred             CeEEEEechHHHHHHHHHHHHCCCeEEE
Confidence            6899999999999999999999999877

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=94.04  E-value=0.026  Score=42.97  Aligned_cols=31  Identities=23%  Similarity=0.260  Sum_probs=28.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |||+|+|.|.+|..+...|.++||+|..+-.
T Consensus         1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r   31 (335)
T 1txg_A            1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT   31 (335)
T ss_dssp             CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence            6899999999999999999988999988765

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.02  E-value=0.035  Score=43.43  Aligned_cols=37  Identities=11%  Similarity=0.138  Sum_probs=31.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.|||.|+|.|.+|..+.+.|.+.||+|.++-..+++
T Consensus        30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~   66 (320)
T 4dll_A           30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPAR   66 (320)
T ss_dssp             CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            3489999999999999999999999999877555543

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=93.95  E-value=0.071  Score=41.70  Aligned_cols=32  Identities=13%  Similarity=0.178  Sum_probs=29.0

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      .|||+++|.|.+|..+...|.+.||+|..+..
T Consensus         3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r   34 (335)
T 3ghy_A            3 LTRICIVGAGAVGGYLGARLALAGEAINVLAR   34 (335)
T ss_dssp             CCCEEEESCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred             CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEC
Confidence            48999999999999999999999999988765

>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*

Probab=93.94  E-value=0.15  Score=37.44  Aligned_cols=34  Identities=24%  Similarity=0.297  Sum_probs=30.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .|++++|++.+|..+++.|.+.+|+++|.+-..+
T Consensus        13 k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~   46 (220)
T 4ea9_A           13 GGVVIIGGGGHAKVVIESLRACGETVAAIVDADP   46 (220)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred             CCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence            4799999999999999999888899999987543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=93.92  E-value=0.12  Score=39.78  Aligned_cols=35  Identities=31%  Similarity=0.375  Sum_probs=31.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHH-hCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLK-KNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl-~~gheVvgVVTqPDK   96 (124)
                      |+|++.|. |.+|..+.++|+ ++||+|+++...+++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~   39 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGT   39 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcc
Confidence            78999996 999999999999 999999998876654

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=93.90  E-value=0.057  Score=42.44  Aligned_cols=34  Identities=15%  Similarity=0.005  Sum_probs=30.7

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCC-CeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNG-HSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~g-heVvgVVTqP   94 (124)
                      .|||.|+|.|.+|..+...|.+.| |+|.+.-..+
T Consensus        24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            379999999999999999999999 9999877666

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=93.89  E-value=0.062  Score=40.03  Aligned_cols=33  Identities=18%  Similarity=0.270  Sum_probs=28.8

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      .|||++.|. |.+|..+.++|+++||+|+++...
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~   36 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   36 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecC
Confidence            489999996 999999999999999998886543

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=93.84  E-value=0.033  Score=41.23  Aligned_cols=34  Identities=24%  Similarity=0.202  Sum_probs=28.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC-CeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG-HSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g-heVvgVVTqPD   95 (124)
                      |||.|+|.|.+|..+...|.+.| |+|..+-..++
T Consensus         1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~   35 (263)
T 1yqg_A            1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAE   35 (263)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred             CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHH
Confidence            68999999999999999999889 99876544443

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=93.84  E-value=0.024  Score=44.48  Aligned_cols=36  Identities=22%  Similarity=0.307  Sum_probs=30.3

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |....|||.|+|.|.+|..+-..|.++||+|+++..
T Consensus         2 ~~~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~   37 (232)
T 3dfu_A            2 MQAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA   37 (232)
T ss_dssp             -CCCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred             CCCCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence            334559999999999999999999999999998655

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=93.84  E-value=0.067  Score=42.55  Aligned_cols=42  Identities=21%  Similarity=0.163  Sum_probs=30.7

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDKAN   98 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDKP~   98 (124)
                      |++++|||+++|+|.+|.++.-.|..+++  +|+.+=..+++..
T Consensus         3 m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~   46 (318)
T 1y6j_A            3 MVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAI   46 (318)
T ss_dssp             ----CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CC
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHH
Confidence            54556999999999999999988888776  8988888777654

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=93.81  E-value=0.052  Score=42.82  Aligned_cols=37  Identities=3%  Similarity=-0.031  Sum_probs=28.8

Q ss_pred             CCCCCceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVTq   93 (124)
                      |+++++||+++|.|.+|.. .+..|.+. +++|+||+..
T Consensus         1 M~~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~   39 (362)
T 3fhl_A            1 MSLEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER   39 (362)
T ss_dssp             --CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS
T ss_pred             CCCCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence            5567799999999999997 67776654 6899998863

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=93.80  E-value=0.046  Score=42.73  Aligned_cols=35  Identities=20%  Similarity=0.375  Sum_probs=29.9

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|||+++|.|.+|..+-..|.++||+|..+ ..++
T Consensus        18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~   52 (318)
T 3hwr_A           18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQ   52 (318)
T ss_dssp             --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHH
T ss_pred             cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHh
Confidence            4589999999999999999999999999988 6654

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=93.77  E-value=0.082  Score=41.33  Aligned_cols=34  Identities=21%  Similarity=0.237  Sum_probs=29.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      ++|||+++|.|.+|...++.|.+. +++|++|+..
T Consensus         4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~   38 (354)
T 3db2_A            4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR   38 (354)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred             CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC
Confidence            458999999999999999988775 7899998754

>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*

Probab=93.76  E-value=0.075  Score=41.94  Aligned_cols=34  Identities=32%  Similarity=0.632  Sum_probs=29.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      ++|||+++|+|.+|..+++.|.+. +.++++|+..
T Consensus         2 ~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~   36 (320)
T 1f06_A            2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSR   36 (320)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcC
Confidence            469999999999999999998876 5799988764

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=93.76  E-value=0.053  Score=41.92  Aligned_cols=35  Identities=20%  Similarity=0.236  Sum_probs=29.8

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCC---eEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGH---SVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gh---eVvgVVTqPD   95 (124)
                      .|||.|+|.|.+|..+...|.++||   +|...-..++
T Consensus         3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~   40 (280)
T 3tri_A            3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD   40 (280)
T ss_dssp             CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred             CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence            4899999999999999999999998   8876655554

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=93.75  E-value=0.086  Score=40.56  Aligned_cols=34  Identities=26%  Similarity=0.121  Sum_probs=29.0

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +.|||++.|. |.+|..+.++|+++||+|+++...
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~   44 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNL   44 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEec
Confidence            4489999987 999999999999999999998653

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=93.66  E-value=0.07  Score=42.13  Aligned_cols=37  Identities=14%  Similarity=0.128  Sum_probs=28.6

Q ss_pred             CCCCCceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVTq   93 (124)
                      |+++++||+++|.|.+|.. .+..|.+. +++|+||...
T Consensus         1 M~m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~   39 (358)
T 3gdo_A            1 MSLDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS   39 (358)
T ss_dssp             -CTTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS
T ss_pred             CCCCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence            5556799999999999997 66666554 6899998864

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=93.66  E-value=0.22  Score=39.68  Aligned_cols=39  Identities=18%  Similarity=0.155  Sum_probs=33.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ..++|.++|.|..|..+.+++.+.|++|+++-..|+.|.
T Consensus        11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~   49 (377)
T 3orq_A           11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPC   49 (377)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChh
Confidence            446899999999999999999999999999977777553

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=93.64  E-value=0.088  Score=41.77  Aligned_cols=36  Identities=11%  Similarity=0.310  Sum_probs=30.9

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      ++|||+++| +|..|..+++.+.++ +++++|++...+
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            358999999 899999999998865 689999988654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=93.62  E-value=0.043  Score=41.71  Aligned_cols=36  Identities=14%  Similarity=0.075  Sum_probs=31.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||.|+|.|.+|..+...|.+.||+|.+.-..+++.
T Consensus         2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   37 (287)
T 3pdu_A            2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKC   37 (287)
T ss_dssp             CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGG
T ss_pred             CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            689999999999999999999999998886666643

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=93.61  E-value=0.1  Score=38.69  Aligned_cols=34  Identities=29%  Similarity=0.251  Sum_probs=28.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc-CCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT-VVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT-qPD   95 (124)
                      ++|++.|. |.+|..+.++|+++||+|+++.. .++
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   37 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPE   37 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC--
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCcc
Confidence            57889995 99999999999999999999887 554

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=93.59  E-value=0.039  Score=46.51  Aligned_cols=38  Identities=13%  Similarity=0.199  Sum_probs=30.3

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++.++||.|+|.|.+|..+...|.++||+|...-..++
T Consensus        12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~   49 (480)
T 2zyd_A           12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE   49 (480)
T ss_dssp             ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred             ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            44678999999999999999999999999976655444

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=93.57  E-value=0.038  Score=45.26  Aligned_cols=35  Identities=29%  Similarity=0.435  Sum_probs=31.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||+++|+|.+|..+...|.+.||+|+++-..+++
T Consensus         1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~   35 (436)
T 1mv8_A            1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (436)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            78999999999999999999999999988666654

>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}

Probab=93.57  E-value=0.078  Score=41.62  Aligned_cols=38  Identities=18%  Similarity=0.250  Sum_probs=30.4

Q ss_pred             cCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         56 QIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        56 ~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .| ++.+||+++|.+..+..+++++.+.|+++++| +.+|
T Consensus         3 ~m-~~~~~ilI~g~g~~~~~~~~a~~~~G~~~v~v-~~~~   40 (403)
T 4dim_A            3 AM-YDNKRLLILGAGRGQLGLYKAAKELGIHTIAG-TMPN   40 (403)
T ss_dssp             ----CCCEEEEECCCGGGHHHHHHHHHHTCEEEEE-ECSS
T ss_pred             cc-cCCCEEEEECCcHhHHHHHHHHHHCCCEEEEE-cCCC
Confidence            35 34589999999999999999999899999999 4444

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=93.56  E-value=0.13  Score=39.41  Aligned_cols=35  Identities=14%  Similarity=0.154  Sum_probs=31.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   60 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSS   60 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccc
Confidence            47999996 999999999999999999999887764

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=93.56  E-value=0.052  Score=42.18  Aligned_cols=35  Identities=23%  Similarity=0.275  Sum_probs=30.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .|||.|+|.|.+|..+.+.|.+.||+|.+.-..++
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~   43 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG   43 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            47999999999999999999999999987755554

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=93.55  E-value=0.19  Score=36.50  Aligned_cols=40  Identities=18%  Similarity=0.039  Sum_probs=33.3

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |..+..+|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~   48 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG   48 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSS
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHh
Confidence            4445567888887 999999999999999999998887654

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=93.51  E-value=0.11  Score=42.35  Aligned_cols=36  Identities=22%  Similarity=0.322  Sum_probs=30.1

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhCC-CeEEEEEcCCC
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKNG-HSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~g-heVvgVVTqPD   95 (124)
                      ++|||++.| ||.+|..+++.|.++. .+|++|....+
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~   52 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRK   52 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTT
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchh
Confidence            458999999 8999999999998765 59999887543

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=93.44  E-value=0.11  Score=40.37  Aligned_cols=34  Identities=18%  Similarity=0.182  Sum_probs=29.1

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      ++|||+++|.|.+|...++.|.+. +++|++|+..
T Consensus         3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~   37 (344)
T 3euw_A            3 LTLRIALFGAGRIGHVHAANIAANPDLELVVIADP   37 (344)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC
Confidence            358999999999999999998875 6899998754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=93.41  E-value=0.08  Score=39.04  Aligned_cols=32  Identities=9%  Similarity=0.173  Sum_probs=28.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||++.|. |.+|..+.++|+ +||+|+++...+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~   33 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS   33 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc
Confidence            68999997 999999999999 899999987765

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=93.40  E-value=0.11  Score=39.59  Aligned_cols=37  Identities=19%  Similarity=0.241  Sum_probs=30.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCC-CeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNG-HSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~g-heVvgVVTqPDK   96 (124)
                      +.|+|++.|. |.+|..+.++|+++| ++|+++...+++
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   83 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG   83 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc
Confidence            3478999998 999999999999999 999998876653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=93.40  E-value=0.077  Score=39.12  Aligned_cols=35  Identities=17%  Similarity=0.283  Sum_probs=29.7

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ...+||++.|. |.+|..+.++|+++||+|+++...
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   45 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   45 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence            34589999987 999999999999999999998764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=93.40  E-value=0.11  Score=38.90  Aligned_cols=34  Identities=9%  Similarity=0.227  Sum_probs=29.6

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCC--CeEEEEEcCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNG--HSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~g--heVvgVVTqP   94 (124)
                      .|||++.|. |.+|..+.++|+++|  |+|+++...+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~   39 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLG   39 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence            489999995 999999999999876  8999987654

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=93.36  E-value=0.051  Score=41.79  Aligned_cols=34  Identities=18%  Similarity=0.157  Sum_probs=30.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|+|.|.+|..+...|.++|++|..+...++
T Consensus         3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~   36 (294)
T 3g17_A            3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAK   36 (294)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCE
T ss_pred             cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccC
Confidence            8999999999999888888888999998877754

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=93.34  E-value=0.12  Score=40.21  Aligned_cols=33  Identities=33%  Similarity=0.350  Sum_probs=29.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||+++|.|.+|..+-..|.+.||+|..+...+
T Consensus         3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~   35 (320)
T 3i83_A            3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD   35 (320)
T ss_dssp             CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence            899999999999999988988899998876654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=93.34  E-value=0.058  Score=39.56  Aligned_cols=36  Identities=25%  Similarity=0.420  Sum_probs=31.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC--CCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN--GHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~--gheVvgVVTqPDKP   97 (124)
                      |+|++.|. |.+|..+.++|+++  ||+|+++...+++.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~   39 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA   39 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH
Confidence            46888987 99999999999998  99999999887653

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=93.34  E-value=0.087  Score=39.82  Aligned_cols=36  Identities=17%  Similarity=0.182  Sum_probs=32.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCC-----CeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNG-----HSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~g-----heVvgVVTqPDKP   97 (124)
                      |||++.|. |.+|..++++|+++|     |+|+++...+++.
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~   43 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA   43 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcc
Confidence            78999996 999999999999999     9999999887754

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=93.33  E-value=0.12  Score=43.51  Aligned_cols=39  Identities=26%  Similarity=0.239  Sum_probs=35.0

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      -.+.||+|+|.|.+|.+.-..|.++||+|+++-..+++.
T Consensus         6 ~~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv   44 (446)
T 4a7p_A            6 HGSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKI   44 (446)
T ss_dssp             -CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             CCceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            356899999999999999999999999999999988875

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=93.33  E-value=0.11  Score=41.13  Aligned_cols=34  Identities=21%  Similarity=0.418  Sum_probs=29.1

Q ss_pred             CCceEEEEcCCHHHHHHHHHHH-h-CCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLK-K-NGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl-~-~gheVvgVVTq   93 (124)
                      +++||+++|.|.+|...++.|. + .+++|++|+..
T Consensus        22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~   57 (357)
T 3ec7_A           22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI   57 (357)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC
Confidence            5689999999999999999988 4 36899998764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=93.31  E-value=0.17  Score=38.12  Aligned_cols=34  Identities=18%  Similarity=0.088  Sum_probs=29.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |+|++.|. |.+|..+.++|+++||+|+++...++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHN   37 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCc
Confidence            78999985 99999999999999999999876543

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*

Probab=93.30  E-value=0.086  Score=42.52  Aligned_cols=36  Identities=17%  Similarity=0.351  Sum_probs=32.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .||.++|.+++|..+++++.+.|+++++|.+.+|..
T Consensus         7 ~kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~~~~~~   42 (446)
T 3ouz_A            7 KSILIANRGEIALRALRTIKEMGKKAICVYSEADKD   42 (446)
T ss_dssp             CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTT
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCEEEEEEcCcccc
Confidence            489999999999999999999999999999887743

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=93.28  E-value=0.063  Score=41.18  Aligned_cols=36  Identities=17%  Similarity=0.193  Sum_probs=30.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDK   96 (124)
                      .|||+++|.|.+|..+...|...|+  +|+.+-..+++
T Consensus         7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~   44 (319)
T 1lld_A            7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKER   44 (319)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhH
Confidence            4899999999999999999988898  99877665543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=93.24  E-value=0.18  Score=37.70  Aligned_cols=32  Identities=6%  Similarity=0.168  Sum_probs=28.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |+|++.|. |.+|..+.++|+++||+|+++...
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNL   34 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCC
Confidence            68999995 999999999999999999998764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=93.23  E-value=0.14  Score=38.11  Aligned_cols=31  Identities=23%  Similarity=0.245  Sum_probs=28.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |||++.|. |.+|..+.++|+++||+|+++..
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r   32 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDN   32 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence            68999987 99999999999999999998865

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=93.20  E-value=0.056  Score=45.15  Aligned_cols=35  Identities=23%  Similarity=0.186  Sum_probs=32.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||+|+|.|.+|.++-..|.++||+|+++-..+++
T Consensus         3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~   37 (450)
T 3gg2_A            3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNK   37 (450)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence            89999999999999999999999999998877664

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=93.19  E-value=0.055  Score=39.81  Aligned_cols=33  Identities=12%  Similarity=0.154  Sum_probs=29.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||++.|. |.+|..+.++|+++||+|+++...+
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL   39 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc
Confidence            78999995 9999999999999999999997743

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=93.18  E-value=0.095  Score=38.73  Aligned_cols=35  Identities=17%  Similarity=0.216  Sum_probs=31.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC--CCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN--GHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~--gheVvgVVTqPDK   96 (124)
                      |||++.|. |.+|..+.++|+++  ||+|+++...+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~   40 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN   40 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc
Confidence            78999998 99999999999998  8999999887664

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=93.15  E-value=0.16  Score=38.23  Aligned_cols=38  Identities=16%  Similarity=0.216  Sum_probs=32.7

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCC-------CeEEEEEcCCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNG-------HSVVGVFTVVDK   96 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~g-------heVvgVVTqPDK   96 (124)
                      .+.|+|++.|. |.+|..+.++|+++|       ++|+++...+++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~   57 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPE   57 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCC
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCc
Confidence            35589999995 999999999999999       899999887654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=93.13  E-value=0.24  Score=37.12  Aligned_cols=36  Identities=14%  Similarity=0.206  Sum_probs=31.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+..++++.
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~   58 (253)
T 2nm0_A           22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP   58 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh
Confidence            46888887 9999999999999999999988877654

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=92.94  E-value=0.12  Score=39.56  Aligned_cols=34  Identities=29%  Similarity=0.500  Sum_probs=27.8

Q ss_pred             CCceEEEEcCCHHHHH-HHHHHHh-CCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAE-VYKLLKK-NGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~-iLeeLl~-~gheVvgVVTq   93 (124)
                      ++|||+++|.|.+|.. .++.|.+ .++++++|+..
T Consensus         5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~   40 (308)
T 3uuw_A            5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP   40 (308)
T ss_dssp             CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS
T ss_pred             ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC
Confidence            4589999999999997 7777766 36899998764

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=92.92  E-value=0.11  Score=40.51  Aligned_cols=37  Identities=19%  Similarity=0.188  Sum_probs=30.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDK   96 (124)
                      ++|||+++|.|.+|..+...|..+|+ +|+.+-..+++
T Consensus         3 ~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~   40 (317)
T 2ewd_A            3 ERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGI   40 (317)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchH
Confidence            35899999999999999999988888 87776665543

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=92.90  E-value=0.15  Score=41.20  Aligned_cols=35  Identities=14%  Similarity=0.110  Sum_probs=29.2

Q ss_pred             CceEEEEc-CCHHHHHHHHHHHhCC-CeEEEEEcCCC
Q psy16773         61 DLRVAVIG-QSSFAAEVYKLLKKNG-HSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmG-Tp~FAa~iLeeLl~~g-heVvgVVTqPD   95 (124)
                      +|||+++| ||.+|..+++.|.++. .||++|....+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~   40 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRF   40 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchh
Confidence            48999999 7999999999988765 59998877443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=92.81  E-value=0.078  Score=38.18  Aligned_cols=34  Identities=18%  Similarity=0.120  Sum_probs=29.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~   40 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEK   40 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            46888877 99999999999999999999887654

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=92.80  E-value=0.066  Score=39.90  Aligned_cols=34  Identities=6%  Similarity=0.051  Sum_probs=29.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC----eEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH----SVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh----eVvgVVTqPD   95 (124)
                      |||.|+|.|.+|..+...|.++||    +|...-..++
T Consensus         3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~   40 (247)
T 3gt0_A            3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA   40 (247)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred             CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence            799999999999999999999998    8876655544

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=92.79  E-value=0.074  Score=41.15  Aligned_cols=35  Identities=17%  Similarity=0.288  Sum_probs=30.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCC-------CeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNG-------HSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~g-------heVvgVVTqPD   95 (124)
                      +|||+|+|.|.+|..+...|.++|       |+|..+-..++
T Consensus         8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~   49 (354)
T 1x0v_A            8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED   49 (354)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred             CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence            589999999999999999998888       89988776665

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=92.74  E-value=0.19  Score=37.88  Aligned_cols=34  Identities=12%  Similarity=0.084  Sum_probs=30.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC--CCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN--GHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~--gheVvgVVTqPD   95 (124)
                      |+|++.|. |.+|..+.++|+++  ||+|+++...++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~   41 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY   41 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence            68999995 99999999999988  899999987653

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=92.67  E-value=0.22  Score=37.41  Aligned_cols=31  Identities=29%  Similarity=0.387  Sum_probs=27.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |||++.|. |.+|..+.++|+++||+|+++..
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~   32 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence            68999986 99999999999999999998754

>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A

Probab=92.67  E-value=0.068  Score=43.76  Aligned_cols=42  Identities=14%  Similarity=0.217  Sum_probs=29.0

Q ss_pred             CCCcc-CCCCCceEEEEcC----CHHHHHHHHHHHhC--CCeEEEEEcC
Q psy16773         52 SKSSQ-IHKCDLRVAVIGQ----SSFAAEVYKLLKKN--GHSVVGVFTV   93 (124)
Q Consensus        52 s~~~~-M~~k~MKIVFmGT----p~FAa~iLeeLl~~--gheVvgVVTq   93 (124)
                      +.-+. |.++++||+++|.    |.+|...++.|.+.  +++|+||...
T Consensus        10 ~~~~~~m~m~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~   58 (438)
T 3btv_A           10 SSVSTVPNAAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP   58 (438)
T ss_dssp             ---------CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS
T ss_pred             CccccccccCCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC
Confidence            33344 4446799999999    88899899888875  6899998754

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=92.65  E-value=0.12  Score=40.18  Aligned_cols=34  Identities=24%  Similarity=0.220  Sum_probs=29.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|||+|+|.|.+|..+...|. +|++|..+...++
T Consensus         2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~   35 (307)
T 3ego_A            2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQE   35 (307)
T ss_dssp             CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred             CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHH
Confidence            389999999999998888888 8999998877654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=92.65  E-value=0.078  Score=43.90  Aligned_cols=37  Identities=24%  Similarity=0.273  Sum_probs=33.8

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +|+|+++|.|.+|..+.+.|.++|++|++|-..|++.
T Consensus         4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v   40 (413)
T 3l9w_A            4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHI   40 (413)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHH
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            4789999999999999999999999999999988764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=92.62  E-value=0.16  Score=38.53  Aligned_cols=35  Identities=14%  Similarity=0.145  Sum_probs=28.6

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |+|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            67999995 999999999999999999999877653

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=92.53  E-value=0.1  Score=40.28  Aligned_cols=31  Identities=10%  Similarity=0.219  Sum_probs=27.3

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCC-eEEEEEc
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGH-SVVGVFT   92 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gh-eVvgVVT   92 (124)
                      |||++.| ||.+|..++++|+++|+ +|+++-.
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            7899999 59999999999999998 8887644

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=92.53  E-value=0.24  Score=35.93  Aligned_cols=40  Identities=13%  Similarity=0.220  Sum_probs=32.7

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |..+.++|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~   50 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAAD   50 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchh
Confidence            3344567888987 999999999999999999998876553

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=92.44  E-value=0.19  Score=38.59  Aligned_cols=35  Identities=11%  Similarity=0.054  Sum_probs=26.5

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHh--------CCCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKK--------NGHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~--------~gheVvgVVTq   93 (124)
                      |+++||+++|+|.+|...++.+..        .+.+|+||...
T Consensus        23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~   65 (393)
T 4fb5_A           23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA   65 (393)
T ss_dssp             -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC
T ss_pred             CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC
Confidence            367899999999999877665532        25789998863

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=92.44  E-value=0.14  Score=40.08  Aligned_cols=40  Identities=13%  Similarity=0.159  Sum_probs=27.8

Q ss_pred             CccCCC-CCceEEEEcCC-HHHHHHHHHHHhC--CCeEEEEEcC
Q psy16773         54 SSQIHK-CDLRVAVIGQS-SFAAEVYKLLKKN--GHSVVGVFTV   93 (124)
Q Consensus        54 ~~~M~~-k~MKIVFmGTp-~FAa~iLeeLl~~--gheVvgVVTq   93 (124)
                      |-+|+. +++||+++|.| .+|...++.|.+.  +.+|++|...
T Consensus        10 ~~~~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~   53 (340)
T 1zh8_A           10 HHHMKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR   53 (340)
T ss_dssp             ------CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS
T ss_pred             ccccCCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC
Confidence            344554 45899999999 7888899888764  4789998763

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=92.43  E-value=0.079  Score=39.48  Aligned_cols=33  Identities=15%  Similarity=0.134  Sum_probs=27.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|+|.|.+|..+...|.+ ||+|..+-..++
T Consensus         2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~   34 (289)
T 2cvz_A            2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE   34 (289)
T ss_dssp             CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred             CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence            689999999999999999999 999876544443

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=92.42  E-value=0.21  Score=40.08  Aligned_cols=38  Identities=26%  Similarity=0.134  Sum_probs=32.0

Q ss_pred             cCCCCCceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcC
Q psy16773         56 QIHKCDLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTV   93 (124)
Q Consensus        56 ~M~~k~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTq   93 (124)
                      .|+++.+||+++|+|.+|..+...|..+|+ +|+.+-..
T Consensus         3 ~m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~   41 (315)
T 3tl2_A            3 AMTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP   41 (315)
T ss_dssp             -CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred             CcccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence            476677899999999999999998888888 88777665

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=92.40  E-value=0.19  Score=36.43  Aligned_cols=33  Identities=24%  Similarity=0.539  Sum_probs=29.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||++.|. |.+|..+.++|++ ||+|+++...++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~   34 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSE   34 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCc
Confidence            67999995 9999999999995 899999988774

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=92.38  E-value=0.12  Score=39.91  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=28.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||+++|.|.+|..+...|.++||+|..+...+
T Consensus         3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~   35 (312)
T 3hn2_A            3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD   35 (312)
T ss_dssp             -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred             CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence            899999999999999999998999998876643

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=92.36  E-value=0.21  Score=42.35  Aligned_cols=38  Identities=18%  Similarity=0.118  Sum_probs=31.6

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+.|+|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~   47 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNS   47 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcc
Confidence            34578999986 999999999999999999998876553

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=92.34  E-value=0.072  Score=43.43  Aligned_cols=35  Identities=23%  Similarity=0.211  Sum_probs=30.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||+|+|.|.+|.+....|.+ ||+|+++-..+++.
T Consensus         1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~   35 (402)
T 1dlj_A            1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKV   35 (402)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHH
Confidence            789999999999999999988 99999997766543

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=92.33  E-value=0.13  Score=40.40  Aligned_cols=36  Identities=19%  Similarity=0.295  Sum_probs=27.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .||.|+|.|..|.+.-..|+++||+|.+-=..+++.
T Consensus         6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~   41 (297)
T 4gbj_A            6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKA   41 (297)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------
T ss_pred             CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            479999999999999999999999998765555544

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=92.32  E-value=0.22  Score=38.92  Aligned_cols=34  Identities=18%  Similarity=0.271  Sum_probs=28.0

Q ss_pred             CCceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVTq   93 (124)
                      +++||+++|.|.+|.. .+..|.+. +.+|+||...
T Consensus         6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~   41 (352)
T 3kux_A            6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS   41 (352)
T ss_dssp             CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS
T ss_pred             CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC
Confidence            5699999999999997 77777654 6899998864

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=92.32  E-value=0.1  Score=37.62  Aligned_cols=39  Identities=18%  Similarity=0.132  Sum_probs=32.5

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+.++|++.|. +.+|..+.++|+++|++|+++...++
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~   46 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD   46 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            4445578888887 99999999999999999998877654

>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}

Probab=92.29  E-value=0.17  Score=39.70  Aligned_cols=35  Identities=14%  Similarity=0.256  Sum_probs=29.1

Q ss_pred             CCceEEEEcCCHHHH-HHHHHHHhC-CCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAA-EVYKLLKKN-GHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa-~iLeeLl~~-gheVvgVVTqP   94 (124)
                      ++|||+++|.|.+|. ..++.|.+. +.+|+||...-
T Consensus        24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~   60 (330)
T 4ew6_A           24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH   60 (330)
T ss_dssp             CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS
T ss_pred             CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence            468999999999998 688888764 68999998543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=92.28  E-value=0.17  Score=36.43  Aligned_cols=36  Identities=28%  Similarity=0.368  Sum_probs=31.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.++|++.|. +.+|..+.++|+++|++|+++...++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~   42 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS   42 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4578999988 99999999999999999998877654

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=92.24  E-value=0.17  Score=40.04  Aligned_cols=36  Identities=17%  Similarity=0.199  Sum_probs=26.9

Q ss_pred             CCCCceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEcC
Q psy16773         58 HKCDLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVTq   93 (124)
                      +++++||+++|.|.+|.. .+..|.+. +++|+||+..
T Consensus         4 ~~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~   41 (364)
T 3e82_A            4 SNNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR   41 (364)
T ss_dssp             ---CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS
T ss_pred             CCCcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence            345689999999999997 66666554 6899998864

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=92.22  E-value=0.39  Score=37.96  Aligned_cols=39  Identities=10%  Similarity=0.083  Sum_probs=33.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ...+|+++|.|..|..+.+++.+.|++|+++-..|+.|.
T Consensus        13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~   51 (389)
T 3q2o_A           13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPC   51 (389)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCch
Confidence            345899999999999999999999999999977776653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=92.19  E-value=0.23  Score=35.78  Aligned_cols=35  Identities=14%  Similarity=0.060  Sum_probs=29.1

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEE
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVV   91 (124)
                      |..+.++|++.|. +.+|..+.++|+++|++|+.+.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~   36 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG   36 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence            3334567888887 9999999999999999999884

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=92.17  E-value=0.13  Score=41.09  Aligned_cols=34  Identities=9%  Similarity=0.198  Sum_probs=26.8

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHh---------CCCeEEEEEc
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKK---------NGHSVVGVFT   92 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~---------~gheVvgVVT   92 (124)
                      +++|||+++|+|.+|...++.+.+         .+.+|+||..
T Consensus        24 s~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d   66 (412)
T 4gqa_A           24 SARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALAD   66 (412)
T ss_dssp             -CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEEC
T ss_pred             cccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEc
Confidence            456999999999999988877754         2468999875

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=92.13  E-value=0.072  Score=44.15  Aligned_cols=36  Identities=11%  Similarity=0.067  Sum_probs=31.0

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTqPDK   96 (124)
                      .|||+|+|.|.+|.+....|.+.  ||+|+++-..+++
T Consensus         5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~   42 (467)
T 2q3e_A            5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESR   42 (467)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHH
T ss_pred             ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHH
Confidence            38999999999999999999887  7999988666554

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=92.10  E-value=0.13  Score=40.63  Aligned_cols=34  Identities=18%  Similarity=0.236  Sum_probs=29.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqP   94 (124)
                      .|||+|+|.|.+|..+...|.+.|+  +|+++-..+
T Consensus        33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~   68 (314)
T 3ggo_A           33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP   68 (314)
T ss_dssp             CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence            4799999999999999999999999  888775554

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=92.05  E-value=0.084  Score=39.80  Aligned_cols=34  Identities=15%  Similarity=0.162  Sum_probs=27.8

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTqP   94 (124)
                      .|||+|+|.|.+|..+...|.+.  +++|.++-..+
T Consensus         6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~   41 (290)
T 3b1f_A            6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD   41 (290)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred             cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence            48999999999999999999876  57887664443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=92.00  E-value=0.17  Score=36.94  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=30.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhC--CCeEEEEEcCCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKN--GHSVVGVFTVVDKA   97 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~--gheVvgVVTqPDKP   97 (124)
                      ||++.|. |.+|..+.++|+++  ||+|+++...+++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~   38 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA   38 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh
Confidence            4788886 99999999999998  99999999887653

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=91.94  E-value=0.18  Score=38.77  Aligned_cols=34  Identities=26%  Similarity=0.372  Sum_probs=28.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHH-h-CCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLK-K-NGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl-~-~gheVvgVVTq   93 (124)
                      ++|||+++|.|.+|...++.|. + .+++|++|...
T Consensus         7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~   42 (346)
T 3cea_A            7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL   42 (346)
T ss_dssp             CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS
T ss_pred             CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC
Confidence            4589999999999999999887 4 36889988754

>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}

Probab=91.91  E-value=0.1  Score=40.14  Aligned_cols=35  Identities=17%  Similarity=0.353  Sum_probs=29.1

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      +++|||+++|.|.+|...++.|.+. ++++++|+..
T Consensus         8 ~~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~   43 (315)
T 3c1a_A            8 NSPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS   43 (315)
T ss_dssp             -CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES
T ss_pred             CCcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC
Confidence            4569999999999999999988875 6889888764

>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}

Probab=91.86  E-value=0.22  Score=38.56  Aligned_cols=34  Identities=26%  Similarity=0.419  Sum_probs=27.0

Q ss_pred             CCceEEEEcCCHHHH-HHHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAA-EVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa-~iLeeLl~~gheVvgVVTq   93 (124)
                      ++|||+++|.|.++. ..++.|...+++|++|...
T Consensus         3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~   37 (336)
T 2p2s_A            3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES   37 (336)
T ss_dssp             -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC
Confidence            568999999998886 5667776668999998864

>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A

Probab=91.86  E-value=0.18  Score=39.49  Aligned_cols=34  Identities=21%  Similarity=0.409  Sum_probs=28.5

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      ++|||+++|.|.+|...++.|.+. ++++++|+..
T Consensus         5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~   39 (362)
T 1ydw_A            5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASR   39 (362)
T ss_dssp             -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC
Confidence            459999999999999999988774 6799988764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=91.85  E-value=0.14  Score=37.50  Aligned_cols=39  Identities=10%  Similarity=-0.036  Sum_probs=32.1

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+.++|++.|. +.+|..+.++|+++|++|+++...++
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~   49 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEY   49 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4445567888877 99999999999999999999887654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=91.83  E-value=0.19  Score=36.49  Aligned_cols=36  Identities=14%  Similarity=0.030  Sum_probs=30.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~   48 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEA   48 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4457888887 99999999999999999999887654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=91.81  E-value=0.15  Score=39.05  Aligned_cols=35  Identities=17%  Similarity=0.161  Sum_probs=30.2

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+||+|+|.|.+|..+...|.+.||+|+.+-..++
T Consensus         4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~   38 (283)
T 4e12_A            4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD   38 (283)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            36899999999999999999999999988755554

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=91.78  E-value=0.14  Score=37.92  Aligned_cols=40  Identities=13%  Similarity=0.066  Sum_probs=32.6

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |..+..+|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~   70 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPA   70 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            4445567888887 899999999999999999998877654

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=91.78  E-value=0.13  Score=38.57  Aligned_cols=33  Identities=18%  Similarity=0.273  Sum_probs=28.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqP   94 (124)
                      |||+|+|.|.+|..+...|.+.||  +|+++-..+
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~   36 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP   36 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence            689999999999999999998898  887754433

>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}

Probab=91.77  E-value=0.13  Score=41.52  Aligned_cols=36  Identities=19%  Similarity=0.328  Sum_probs=32.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .||+++|.++.|..+++++.+.|+++++|.+.+|..
T Consensus         7 k~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~   42 (461)
T 2dzd_A            7 RKVLVANRGEIAIRVFRACTELGIRTVAIYSKEDVG   42 (461)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHTCEEEEEECGGGTT
T ss_pred             cEEEEECCcHHHHHHHHHHHHcCCEEEEEECCcccc
Confidence            479999999999999999988899999999988753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=91.69  E-value=0.46  Score=34.94  Aligned_cols=40  Identities=15%  Similarity=0.133  Sum_probs=33.0

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |..+.++|++.|. +.+|..+.++|+++|++|+++...++.
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~   43 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ   43 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            4444567888887 999999999999999999998887663

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=91.69  E-value=0.21  Score=36.57  Aligned_cols=39  Identities=21%  Similarity=0.132  Sum_probs=31.6

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+..+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~   51 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADD   51 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChh
Confidence            4444567888887 99999999999999999998866543

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=91.69  E-value=0.21  Score=40.31  Aligned_cols=36  Identities=14%  Similarity=0.346  Sum_probs=30.8

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      +++||+++| +|.+|..+++.+.++ +++++|++..++
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~   57 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKG   57 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence            458999999 899999999998864 689999998765

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=91.66  E-value=0.19  Score=37.29  Aligned_cols=37  Identities=19%  Similarity=0.248  Sum_probs=30.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.++|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~   41 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEA   41 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            3356777777 999999999999999999998877654

>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}

Probab=91.65  E-value=0.23  Score=39.57  Aligned_cols=43  Identities=14%  Similarity=0.194  Sum_probs=36.9

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |.++..||+++|.+.-...+++++.+.|+++++|...||....
T Consensus         1 M~~~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~~~~   43 (425)
T 3vot_A            1 MTKRNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAEDFPG   43 (425)
T ss_dssp             -CCCCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSCCCC
T ss_pred             CCCCCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCccccc
Confidence            6677789999999888888999998899999999999987654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=91.64  E-value=0.32  Score=37.96  Aligned_cols=34  Identities=15%  Similarity=0.321  Sum_probs=29.4

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      |||+++| +|.+|..+.+.+.++ ++++++++...+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~   36 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD   36 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC
Confidence            6899999 599999999988765 899999997654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=91.63  E-value=0.2  Score=39.59  Aligned_cols=35  Identities=11%  Similarity=0.085  Sum_probs=31.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .|+|++.|. |.+|..++++|+++|++|+++...++
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~  104 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN  104 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence            368999996 99999999999888999999998887

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=91.57  E-value=0.08  Score=38.88  Aligned_cols=35  Identities=20%  Similarity=0.058  Sum_probs=31.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. |.+|..+.++|+++||+|+++...+++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   38 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLG   38 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence            47999997 999999999999999999999888764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=91.56  E-value=0.15  Score=37.21  Aligned_cols=36  Identities=17%  Similarity=0.108  Sum_probs=30.9

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |..+.++|++.|. +.+|..+.++|+++|++|+++..
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r   53 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG   53 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            5555678888887 99999999999999999998876

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=91.54  E-value=0.14  Score=43.41  Aligned_cols=39  Identities=10%  Similarity=0.160  Sum_probs=30.5

Q ss_pred             CccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         54 SSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        54 ~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |-+|+   .||.|+|.|.+|..+...|.++||+|.+.-..++
T Consensus         6 ~~~~~---~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~   44 (497)
T 2p4q_A            6 HHHMS---ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS   44 (497)
T ss_dssp             ---CC---CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred             cccCC---CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            44454   6899999999999999999999999976655554

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=91.52  E-value=0.2  Score=37.85  Aligned_cols=39  Identities=13%  Similarity=0.039  Sum_probs=31.2

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+..+|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~   64 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE   64 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4344457888887 99999999999999999988866554

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=91.50  E-value=0.37  Score=36.14  Aligned_cols=33  Identities=15%  Similarity=0.240  Sum_probs=29.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC---C---CeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN---G---HSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~---g---heVvgVVTqP   94 (124)
                      |||++.|. |.+|..+.++|+++   |   |+|+++...+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~   40 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLT   40 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCC
Confidence            68999985 99999999999996   7   9999987654

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=91.46  E-value=0.26  Score=37.97  Aligned_cols=33  Identities=18%  Similarity=0.263  Sum_probs=28.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      +|||+++|.|.+|...++.|.+. +++|++|+..
T Consensus         3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~   36 (331)
T 4hkt_A            3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA   36 (331)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC
Confidence            38999999999999999998874 7899998754

>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A

Probab=91.44  E-value=0.19  Score=36.61  Aligned_cols=32  Identities=13%  Similarity=0.075  Sum_probs=25.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      .|++++|++.+|..+++.+.+++|++++.+-.
T Consensus         4 ~~~~I~Gagg~gk~v~~~~~~~~~~v~~f~Dd   35 (194)
T 3bfp_A            4 EKIYIYGASGHGLVCEDVAKNMGYKECIFLDD   35 (194)
T ss_dssp             SEEEEEC--CHHHHHHHHHHHHTCSEEEEEC-
T ss_pred             ccEEEEeCCHHHHHHHHHHHhCCCeEEEEEeC
Confidence            37999999999999999887667999998875

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=91.43  E-value=0.12  Score=41.75  Aligned_cols=32  Identities=25%  Similarity=0.330  Sum_probs=26.2

Q ss_pred             CceEEEEc-CCHHHHHHHHHHHhCCC---eEEEEEc
Q psy16773         61 DLRVAVIG-QSSFAAEVYKLLKKNGH---SVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmG-Tp~FAa~iLeeLl~~gh---eVvgVVT   92 (124)
                      +|||+++| ||.+|..+++.|.+++|   +|+++..
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s   41 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   41 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            48999999 79999999999986654   6676664

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=91.41  E-value=0.3  Score=35.90  Aligned_cols=34  Identities=21%  Similarity=0.312  Sum_probs=29.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCC-CeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNG-HSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~g-heVvgVVTqPDK   96 (124)
                      ||++.|. |.+|..+.++|+++| |+|+++...+++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   36 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG   36 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCC
Confidence            4788887 999999999999999 999998876653

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=91.39  E-value=0.24  Score=35.71  Aligned_cols=36  Identities=25%  Similarity=0.284  Sum_probs=30.7

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~   42 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA   42 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3457888887 99999999999999999998877654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=91.38  E-value=0.24  Score=35.83  Aligned_cols=37  Identities=16%  Similarity=0.166  Sum_probs=31.0

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+..+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~   46 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAA   46 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            34457888887 99999999999999999999877654

>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0

Probab=91.29  E-value=0.17  Score=39.22  Aligned_cols=36  Identities=22%  Similarity=0.260  Sum_probs=27.0

Q ss_pred             CceEEE--EcCCHHHHHHHHHHHhC--CCeEEEEEcCCCC
Q psy16773         61 DLRVAV--IGQSSFAAEVYKLLKKN--GHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVF--mGTp~FAa~iLeeLl~~--gheVvgVVTqPDK   96 (124)
                      ++||++  .|+|.....+|+++.+.  +++|++|+|+++.
T Consensus         8 ~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~   47 (215)
T 3kcq_A            8 ELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAE   47 (215)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTT
T ss_pred             CCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcc
Confidence            356654  57799999999887653  3799999997543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=91.26  E-value=0.22  Score=39.52  Aligned_cols=37  Identities=16%  Similarity=0.134  Sum_probs=28.2

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCC-------eEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGH-------SVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gh-------eVvgVVTq   93 (124)
                      |.+++|||++.|. |.+|..+...|+.+++       +|+.+-..
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~   45 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP   45 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence            4455799999997 9999999998888775       67775333

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=91.25  E-value=0.28  Score=37.11  Aligned_cols=33  Identities=18%  Similarity=0.356  Sum_probs=29.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqP   94 (124)
                      |||++.|. |.+|..+.+.|+++ ||+|+++...+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~   35 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT   35 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCC
Confidence            68999996 99999999999987 79999987654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=91.19  E-value=0.41  Score=34.70  Aligned_cols=34  Identities=24%  Similarity=0.390  Sum_probs=29.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~   37 (257)
T 1fjh_A            3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE   37 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            4777887 999999999999999999998887664

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=91.13  E-value=0.28  Score=36.20  Aligned_cols=39  Identities=15%  Similarity=0.026  Sum_probs=31.8

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+.++|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~   44 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQK   44 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4444567888887 89999999999999999998877654

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=91.13  E-value=0.14  Score=42.65  Aligned_cols=35  Identities=11%  Similarity=0.138  Sum_probs=29.4

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|||+|+|.|.+|..+...|.++||+|..+-..++
T Consensus         5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~   39 (474)
T 2iz1_A            5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTS   39 (474)
T ss_dssp             TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence            58999999999999999999999999876544443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=91.11  E-value=0.22  Score=36.93  Aligned_cols=37  Identities=11%  Similarity=-0.041  Sum_probs=32.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ++|++.|. +.+|..+.++|+++|++|+++...+++..
T Consensus         4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~   41 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA   41 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc
Confidence            46888885 99999999999999999999999887654

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=91.10  E-value=0.31  Score=37.31  Aligned_cols=32  Identities=28%  Similarity=0.410  Sum_probs=27.3

Q ss_pred             ceEEEEcCCHHHHHH-HHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEV-YKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~i-LeeLl~~gheVvgVVTq   93 (124)
                      |||+++|+|.+|... ++.|.+.++++++|+..
T Consensus         1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~   33 (332)
T 2glx_A            1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMST   33 (332)
T ss_dssp             CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECS
T ss_pred             CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECC
Confidence            689999999999987 77887767899998754

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=91.04  E-value=0.39  Score=38.74  Aligned_cols=38  Identities=11%  Similarity=0.069  Sum_probs=33.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      +.+||+++|.|..|..+.+++.+.|++|+++- .++.|.
T Consensus        23 ~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~   60 (403)
T 3k5i_A           23 NSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPA   60 (403)
T ss_dssp             SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcH
Confidence            34699999999999999999988899999998 777664

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=90.94  E-value=0.27  Score=36.22  Aligned_cols=36  Identities=19%  Similarity=0.231  Sum_probs=30.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.+++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~   40 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEG   40 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4467888887 99999999999999999998877654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=90.89  E-value=0.45  Score=34.49  Aligned_cols=36  Identities=22%  Similarity=0.401  Sum_probs=31.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ++|++.|. +.+|..+.++|+++|++|+++..++++.
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~   40 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ   40 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc
Confidence            56888887 9999999999999999999998887753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=90.87  E-value=0.58  Score=34.19  Aligned_cols=37  Identities=14%  Similarity=0.091  Sum_probs=29.9

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCe-EEEEEcCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHS-VVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~ghe-VvgVVTqPD   95 (124)
                      .+.++|++.|. +.+|..+.++|+++|++ |+.+-..++
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~   41 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN   41 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch
Confidence            34467888887 99999999999999997 777766653

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=90.85  E-value=0.24  Score=42.24  Aligned_cols=36  Identities=14%  Similarity=0.125  Sum_probs=33.1

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CC-eEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GH-SVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gh-eVvgVVTqPD   95 (124)
                      +.|||+|+|.|.+|.++-..|.+. || +|+++-..++
T Consensus        17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            348999999999999999999999 99 9999988888

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=90.82  E-value=0.086  Score=38.65  Aligned_cols=35  Identities=17%  Similarity=0.055  Sum_probs=29.2

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +++|+++|.|.+|..+.+.|.+.|+ |++|-.+|++
T Consensus         9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~   43 (234)
T 2aef_A            9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVR   43 (234)
T ss_dssp             -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGH
T ss_pred             CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHH
Confidence            4789999999999999999988888 8877666653

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=90.79  E-value=0.29  Score=39.87  Aligned_cols=35  Identities=11%  Similarity=0.091  Sum_probs=29.0

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      +++|||+++|+|.+|...++.|.+. +.+|++|...
T Consensus        18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~   53 (444)
T 2ixa_A           18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP   53 (444)
T ss_dssp             -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC
Confidence            4569999999999999999888764 6899998753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=90.75  E-value=0.58  Score=34.09  Aligned_cols=36  Identities=17%  Similarity=0.242  Sum_probs=31.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ++|++.|. +.+|..+.+.|+++|++|+.+..++++.
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~   44 (241)
T 1dhr_A            8 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE   44 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc
Confidence            56888887 9999999999999999999998887653

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=90.71  E-value=0.2  Score=42.85  Aligned_cols=37  Identities=19%  Similarity=0.305  Sum_probs=31.7

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|||.|+|.|.+|..+...|.+.||+|++.-..+++
T Consensus         3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~   39 (484)
T 4gwg_A            3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSK   39 (484)
T ss_dssp             CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHH
T ss_pred             CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            3489999999999999999999999999887666553

>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}

Probab=90.69  E-value=0.26  Score=39.41  Aligned_cols=37  Identities=16%  Similarity=0.070  Sum_probs=29.6

Q ss_pred             CCCceEEEEcCCH---HHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQSS---FAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGTp~---FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      ++++||+++|.|.   +|...+..+... +++++++++.+|
T Consensus        10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~   50 (398)
T 3dty_A           10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDID   50 (398)
T ss_dssp             CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSS
T ss_pred             cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCC
Confidence            4679999999999   999888887665 479998666555

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=90.61  E-value=0.28  Score=38.89  Aligned_cols=35  Identities=26%  Similarity=0.161  Sum_probs=29.7

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .|||+|+|.|.+|..+...|.+.|++|+.....++
T Consensus        16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~   50 (338)
T 1np3_A           16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS   50 (338)
T ss_dssp             TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred             CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence            47899999999999999999999999876655554

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=90.58  E-value=0.15  Score=42.68  Aligned_cols=34  Identities=18%  Similarity=0.243  Sum_probs=29.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||.|+|.|.+|..+...|.++||+|..+-..++
T Consensus         2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~   35 (478)
T 1pgj_A            2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYS   35 (478)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            7899999999999999999999999876655444

>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*

Probab=90.58  E-value=0.36  Score=37.27  Aligned_cols=35  Identities=17%  Similarity=0.206  Sum_probs=28.9

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHh----CCCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKK----NGHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~----~gheVvgVVTq   93 (124)
                      +++|||+++|.|.+|...++.|.+    .+.++++|...
T Consensus         5 ~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~   43 (294)
T 1lc0_A            5 SGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSR   43 (294)
T ss_dssp             CCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECS
T ss_pred             CCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECc
Confidence            356899999999999999988764    35789998864

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=90.00  E-value=0.048  Score=40.49  Aligned_cols=35  Identities=20%  Similarity=0.098  Sum_probs=29.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .|||.|+|.|.+|..+.+.|.+.|++|..+-..++
T Consensus        19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~   53 (201)
T 2yjz_A           19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ   53 (201)
Confidence            47899999999999999999988999877655443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=90.56  E-value=0.63  Score=35.19  Aligned_cols=42  Identities=12%  Similarity=0.132  Sum_probs=33.2

Q ss_pred             ccCCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         55 SQIHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        55 ~~M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.|..+...+++-|. +.+|..+.++|+++|++|+.+...+++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~   45 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEP   45 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhh
Confidence            345555567888887 999999999999999999998888764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=90.52  E-value=0.27  Score=36.91  Aligned_cols=40  Identities=13%  Similarity=0.197  Sum_probs=30.7

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |..+..+|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~   63 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA   63 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence            4434456788887 999999999999999999998887654

>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}

Probab=90.52  E-value=0.36  Score=35.98  Aligned_cols=36  Identities=14%  Similarity=-0.033  Sum_probs=28.7

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +++.++|+++|.|..|..+...|.++|++|+-+=.+
T Consensus         2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~   37 (335)
T 2zbw_A            2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPL   37 (335)
T ss_dssp             -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            344578999999999999988898889998655443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=90.50  E-value=0.18  Score=41.16  Aligned_cols=36  Identities=11%  Similarity=0.054  Sum_probs=32.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..|+|++.|. |.+|..++++|.++|++|.+++..++
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~  185 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN  185 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSS
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCC
Confidence            3478999996 99999999999888999999998887

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=90.50  E-value=0.17  Score=42.81  Aligned_cols=36  Identities=19%  Similarity=0.244  Sum_probs=30.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .|||+|+|+|.+|.+.-..|.+ ||+|+++-..+++.
T Consensus        36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v   71 (432)
T 3pid_A           36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKV   71 (432)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHH
T ss_pred             CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHh
Confidence            4899999999999998887776 99999988777654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=90.41  E-value=0.17  Score=40.92  Aligned_cols=40  Identities=23%  Similarity=0.190  Sum_probs=32.0

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDK   96 (124)
                      |+++.|||+++|+|.+|..+...|..+|+  +|+.+=..+++
T Consensus         1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k   42 (326)
T 3pqe_A            1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEK   42 (326)
T ss_dssp             -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHH
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHH
Confidence            55567999999999999999998888776  78877665554

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=90.38  E-value=0.23  Score=35.68  Aligned_cols=36  Identities=17%  Similarity=0.105  Sum_probs=30.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~   42 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGE   42 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChH
Confidence            3456788877 99999999999999999999887654

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=90.36  E-value=0.14  Score=42.89  Aligned_cols=37  Identities=14%  Similarity=0.108  Sum_probs=31.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTqPDKP   97 (124)
                      .|||+|+|.|.+|.+.-..|.+.  ||+|+++-..+++.
T Consensus         9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v   47 (481)
T 2o3j_A            9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKI   47 (481)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            48999999999999999889887  79999987766543

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=90.36  E-value=0.15  Score=40.20  Aligned_cols=35  Identities=11%  Similarity=0.207  Sum_probs=30.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDK   96 (124)
                      |||+++|.|.+|..+...|..+|+  +|+.+-..+++
T Consensus         1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~   37 (319)
T 1a5z_A            1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKR   37 (319)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHH
Confidence            689999999999999999988888  89887665543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=90.34  E-value=0.38  Score=34.21  Aligned_cols=35  Identities=20%  Similarity=0.249  Sum_probs=30.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCC--CeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNG--HSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~g--heVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.++|+++|  ++|+++...+++
T Consensus         4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~   41 (250)
T 1yo6_A            4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK   41 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGG
T ss_pred             CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHH
Confidence            46888887 999999999999999  999999887664

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=90.25  E-value=0.39  Score=37.29  Aligned_cols=33  Identities=33%  Similarity=0.541  Sum_probs=28.1

Q ss_pred             CceEEEEcCCHHHHHHHHHHH-h-CCCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLK-K-NGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl-~-~gheVvgVVTq   93 (124)
                      +|||+++|.|.+|...++.|. + .+++|++|+..
T Consensus         2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~   36 (344)
T 3mz0_A            2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV   36 (344)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred             eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC
Confidence            389999999999999999998 4 36899998754

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=90.23  E-value=0.48  Score=34.04  Aligned_cols=36  Identities=17%  Similarity=0.139  Sum_probs=30.3

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC-CCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV-VDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq-PDK   96 (124)
                      .++|++.|. +.+|..+.++|+++|++|+++... +++
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~   44 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN   44 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhh
Confidence            356888877 999999999999999999998887 543

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=90.20  E-value=0.61  Score=36.42  Aligned_cols=36  Identities=17%  Similarity=0.177  Sum_probs=32.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +||+++|.+..|..+.++|.+.|++++.+-..++.|
T Consensus         2 ~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~~~   37 (380)
T 3ax6_A            2 KKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRSP   37 (380)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCT
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence            479999999999999999999999999998887765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=90.19  E-value=0.5  Score=33.61  Aligned_cols=34  Identities=24%  Similarity=0.134  Sum_probs=30.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++|++.|. +.+|..+.++|+++|++|+++...++
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~   37 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   37 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc
Confidence            56888887 99999999999999999999887765

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=90.15  E-value=0.23  Score=41.47  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=29.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||.|+|.|.+|..+...|.++||+|..+-..++
T Consensus         3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~   36 (482)
T 2pgd_A            3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS   36 (482)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred             CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            7899999999999999999999999876655554

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=90.11  E-value=0.26  Score=39.18  Aligned_cols=36  Identities=19%  Similarity=0.186  Sum_probs=29.5

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhCC--CeEEEEEcCCC
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKNG--HSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~g--heVvgVVTqPD   95 (124)
                      ++|||+++| +|.+|..+...|+++|  ++|+.+-..++
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            348999999 7999999999998888  78888765554

>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*

Probab=90.10  E-value=0.38  Score=38.37  Aligned_cols=33  Identities=12%  Similarity=0.293  Sum_probs=28.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      -|||+++|+|.+|..+++.  . ++|+++|+.  +|..
T Consensus        12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~--~k~g   44 (253)
T 1j5p_A           12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD--RISK   44 (253)
T ss_dssp             CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC--SSCC
T ss_pred             cceEEEECcCHHHHHHHhc--C-CcEEEEEEe--cccc
Confidence            3999999999999999998  5 899999987  5543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=90.10  E-value=0.35  Score=35.37  Aligned_cols=39  Identities=23%  Similarity=0.155  Sum_probs=32.3

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+..++++.|. +.+|..+.++|+++|++|+.+-..++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~   44 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKA   44 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            5555567888887 89999999999999999998876654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=90.02  E-value=0.47  Score=36.58  Aligned_cols=33  Identities=9%  Similarity=0.187  Sum_probs=28.6

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +||+|+| .|.+|..+...|.+.||+|..+-..+
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            5899999 99999999999998899998775444

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=90.02  E-value=0.23  Score=39.31  Aligned_cols=34  Identities=18%  Similarity=0.310  Sum_probs=30.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC-------CeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG-------HSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g-------heVvgVVTqPD   95 (124)
                      |||+|+|+|.+|..+...|.++|       |+|..+-..++
T Consensus        22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~   62 (375)
T 1yj8_A           22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF   62 (375)
T ss_dssp             BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred             CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence            79999999999999999998888       99987766665

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=89.89  E-value=0.39  Score=35.76  Aligned_cols=37  Identities=11%  Similarity=-0.130  Sum_probs=31.1

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+..+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~   66 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKH   66 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHH
Confidence            34467888887 99999999999999999998887654

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=89.87  E-value=0.47  Score=38.44  Aligned_cols=37  Identities=14%  Similarity=0.115  Sum_probs=28.1

Q ss_pred             CCCceEEEEcCCH---HHHHHHHHHHhCC-CeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQSS---FAAEVYKLLKKNG-HSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGTp~---FAa~iLeeLl~~g-heVvgVVTqPD   95 (124)
                      ++++||+++|.|.   +|...+..+...+ +++++.++.++
T Consensus        35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~   75 (417)
T 3v5n_A           35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSST   75 (417)
T ss_dssp             CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSS
T ss_pred             CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCC
Confidence            3568999999998   9998888877654 78987555554

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=89.84  E-value=0.39  Score=37.09  Aligned_cols=35  Identities=11%  Similarity=0.210  Sum_probs=26.3

Q ss_pred             CCCceEEEEcCCHHHHHH-HHHHHhC-CCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEV-YKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~i-LeeLl~~-gheVvgVVTq   93 (124)
                      +++|||+++|+|.+|... +..+.+. +.+|+||...
T Consensus        21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~   57 (350)
T 4had_A           21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR   57 (350)
T ss_dssp             -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS
T ss_pred             cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC
Confidence            344899999999999864 5666554 6799998753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=89.79  E-value=0.42  Score=35.61  Aligned_cols=37  Identities=16%  Similarity=0.116  Sum_probs=31.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.++|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~   62 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDV   62 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            4467888887 999999999999999999998776643

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=89.74  E-value=0.76  Score=33.78  Aligned_cols=38  Identities=18%  Similarity=0.212  Sum_probs=31.9

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+.+..++++..
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~   53 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK   53 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence            356778887 99999999999999999999988876543

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=89.69  E-value=0.39  Score=38.07  Aligned_cols=34  Identities=21%  Similarity=0.252  Sum_probs=26.4

Q ss_pred             CCceEEEEcCCHHHHH-HHHHHHhCCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAE-VYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~-iLeeLl~~gheVvgVVTq   93 (124)
                      +++||+++|.|.++.. .+..+...+.+|+||+..
T Consensus        25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~   59 (361)
T 3u3x_A           25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEK   59 (361)
T ss_dssp             -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECS
T ss_pred             cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcC
Confidence            5689999999998864 455555578999999864

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=89.65  E-value=0.18  Score=39.13  Aligned_cols=35  Identities=23%  Similarity=0.218  Sum_probs=29.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDK   96 (124)
                      |||+++|+|.+|..+...|.++|  ++|+.+-..+++
T Consensus         2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~   38 (309)
T 1hyh_A            2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (309)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHH
Confidence            79999999999999999998888  788877665543

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=89.64  E-value=0.38  Score=38.74  Aligned_cols=32  Identities=13%  Similarity=0.305  Sum_probs=27.5

Q ss_pred             CceEEEEc-CCHHHHHHHHHHHhC---CCeEEEEEc
Q psy16773         61 DLRVAVIG-QSSFAAEVYKLLKKN---GHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmG-Tp~FAa~iLeeLl~~---gheVvgVVT   92 (124)
                      +|||++.| ||.+|..+++.|.++   .+||+++..
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s   38 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLAS   38 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEEC
Confidence            48999999 899999999999886   258888874

>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}

Probab=89.63  E-value=0.53  Score=35.53  Aligned_cols=30  Identities=23%  Similarity=0.246  Sum_probs=26.2

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEE
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgV   90 (124)
                      +|||+++|.|..|..+--.|.++|++|+-+
T Consensus         1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~   30 (412)
T 4hb9_A            1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIY   30 (412)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence            489999999999998888888899997655

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=89.63  E-value=0.38  Score=38.74  Aligned_cols=32  Identities=22%  Similarity=0.366  Sum_probs=27.4

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhCC-CeEEEEE
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKNG-HSVVGVF   91 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~g-heVvgVV   91 (124)
                      ++|||++.| ||.+|..+++.|.++. .+|++|.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            458999999 8999999999887653 6899987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=89.62  E-value=0.73  Score=33.97  Aligned_cols=36  Identities=14%  Similarity=0.094  Sum_probs=30.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+.+-.++++
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   42 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG   42 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH
Confidence            356888887 999999999999999999998877664

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=89.55  E-value=0.94  Score=33.37  Aligned_cols=36  Identities=19%  Similarity=0.310  Sum_probs=31.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+|++.|. +.+|..+.++|+++|++|+++..++++.
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~   59 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN   59 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc
Confidence            46888887 8999999999999999999998887754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=89.54  E-value=0.12  Score=35.39  Aligned_cols=36  Identities=14%  Similarity=0.181  Sum_probs=28.3

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+||+++|+|.+|..+++.|.+.|++|..+-..+++
T Consensus        21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~   56 (144)
T 3oj0_A           21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDH   56 (144)
T ss_dssp             CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHH
Confidence            478999999999999999988888895544444443

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=89.46  E-value=0.44  Score=37.34  Aligned_cols=37  Identities=19%  Similarity=0.227  Sum_probs=31.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTqPDKP~   98 (124)
                      |||+++|.|.+|..+...|..+  +++|+.+-..+++..
T Consensus         1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~   39 (310)
T 1guz_A            1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence            7899999999999998888874  799999988776543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=89.41  E-value=0.54  Score=35.14  Aligned_cols=35  Identities=20%  Similarity=0.185  Sum_probs=30.2

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~   53 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE   53 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            357888887 99999999999999999999887654

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=89.39  E-value=0.5  Score=37.96  Aligned_cols=32  Identities=19%  Similarity=0.385  Sum_probs=27.3

Q ss_pred             CceEEEEc-CCHHHHHHHHHHHhCC-CeEEEEEc
Q psy16773         61 DLRVAVIG-QSSFAAEVYKLLKKNG-HSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmG-Tp~FAa~iLeeLl~~g-heVvgVVT   92 (124)
                      +|||+++| ||.+|..+++.|.+++ ++|+++..
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~   41 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAA   41 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence            37999999 8999999999887754 68999874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=89.38  E-value=0.32  Score=35.32  Aligned_cols=37  Identities=27%  Similarity=0.263  Sum_probs=30.9

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+.+++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~   40 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQA   40 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            34467888887 99999999999999999998887664

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=89.35  E-value=0.43  Score=40.41  Aligned_cols=36  Identities=25%  Similarity=0.297  Sum_probs=30.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..+||+|+|.|.+|..+...|.+.||+|+.+-..++
T Consensus         4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e   39 (483)
T 3mog_A            4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE   39 (483)
T ss_dssp             CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            346899999999999999999999999988765554

>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*

Probab=89.28  E-value=0.32  Score=39.78  Aligned_cols=34  Identities=9%  Similarity=0.162  Sum_probs=28.2

Q ss_pred             CCceEEEEcCCHHHH-HHHHHHHhC-CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAA-EVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa-~iLeeLl~~-gheVvgVVTq   93 (124)
                      ++|||+++|.|.+|. ..++.|.+. +++|++|+..
T Consensus        82 ~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~  117 (433)
T 1h6d_A           82 RRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG  117 (433)
T ss_dssp             CCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS
T ss_pred             CceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC
Confidence            568999999999997 788888764 5789998764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=89.26  E-value=0.57  Score=38.25  Aligned_cols=37  Identities=8%  Similarity=0.004  Sum_probs=32.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhC---CCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKN---GHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~---gheVvgVVTqPDK   96 (124)
                      +.|+|++.|. |.+|..++++|+++   |++|+++...+++
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            3479999996 99999999999988   8999999987763

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=89.15  E-value=0.55  Score=39.86  Aligned_cols=38  Identities=18%  Similarity=0.170  Sum_probs=32.7

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqPDKP   97 (124)
                      +.|+|++.|. |.+|..+.++|+++ ||+|+++...+++.
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~  353 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI  353 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTT
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhh
Confidence            3478999995 99999999999998 89999998877653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=89.04  E-value=0.46  Score=37.05  Aligned_cols=33  Identities=15%  Similarity=0.097  Sum_probs=27.5

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCC-------eEEEEEc
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGH-------SVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gh-------eVvgVVT   92 (124)
                      ++|||++.|. |.+|..+...|+++|+       +|+.+-.
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~   43 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI   43 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeC
Confidence            4589999996 9999999999998886       7777643

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=88.94  E-value=0.45  Score=38.93  Aligned_cols=33  Identities=21%  Similarity=0.262  Sum_probs=28.1

Q ss_pred             CceEEEEc-CCHHHHHHHHHHHhCC------CeEEEEEcC
Q psy16773         61 DLRVAVIG-QSSFAAEVYKLLKKNG------HSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmG-Tp~FAa~iLeeLl~~g------heVvgVVTq   93 (124)
                      +|||+++| ||.+|..+++.|.+++      ++|+++...
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~   48 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA   48 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC
Confidence            48999999 7999999999998876      388888753

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=88.93  E-value=0.65  Score=37.88  Aligned_cols=39  Identities=8%  Similarity=-0.034  Sum_probs=31.7

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ....||.++|.|..|..+.+++.+.|++|+.+-..|+.|
T Consensus        33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p   71 (419)
T 4e4t_A           33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASP   71 (419)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCH
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCc
Confidence            345799999999999999999999999998774445443

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=88.92  E-value=0.56  Score=37.43  Aligned_cols=34  Identities=15%  Similarity=0.276  Sum_probs=28.1

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHh--CCCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKK--NGHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~--~gheVvgVVTq   93 (124)
                      +++||+++|+|.+|...++.|.+  .+.++++|+..
T Consensus         3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~   38 (312)
T 1nvm_B            3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI   38 (312)
T ss_dssp             SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECS
T ss_pred             CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeC
Confidence            45899999999999999998865  35688887763

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=88.88  E-value=0.26  Score=40.03  Aligned_cols=34  Identities=21%  Similarity=0.280  Sum_probs=30.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +||+|+|.|.+|..+...|.+.||+|.+.-..++
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~   42 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS   42 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            7899999999999999999999999988766554

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=88.85  E-value=0.42  Score=37.11  Aligned_cols=32  Identities=25%  Similarity=0.249  Sum_probs=27.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      |||+++|.|.+|...++.|.+. +++|++|+..
T Consensus         3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~   35 (344)
T 3ezy_A            3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV   35 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS
T ss_pred             eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC
Confidence            8999999999999999988774 6899998754

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=88.81  E-value=0.61  Score=32.93  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=26.8

Q ss_pred             CceEEEEcC----CHHHHHHHHHHHhCCCeEEEEE
Q psy16773         61 DLRVAVIGQ----SSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        61 ~MKIVFmGT----p~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +.+|+|+|.    +.+|..+++.|++.||+|..|=
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vn   48 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   48 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeC
Confidence            468999999    9999999999999999966553

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=88.81  E-value=0.56  Score=37.86  Aligned_cols=38  Identities=16%  Similarity=0.120  Sum_probs=31.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      +.|||+++|+|.+|..+...|..+|+ +|+.+-..+++.
T Consensus         6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~   44 (324)
T 3gvi_A            6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTP   44 (324)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhH
Confidence            45899999999999999888888888 888777777654

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=88.81  E-value=0.66  Score=37.85  Aligned_cols=34  Identities=12%  Similarity=0.271  Sum_probs=29.2

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhC-CCeEEEEEcCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKN-GHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~-gheVvgVVTqPD   95 (124)
                      |||+++| ||..|..+++.|.++ .++++++....+
T Consensus         5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~   40 (337)
T 3dr3_A            5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQ   40 (337)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETT
T ss_pred             eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCc
Confidence            8999999 599999999988874 579999988763

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=88.80  E-value=0.51  Score=34.76  Aligned_cols=36  Identities=22%  Similarity=0.253  Sum_probs=30.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   42 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVD   42 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            3456888887 99999999999999999998877654

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=88.77  E-value=0.61  Score=37.13  Aligned_cols=38  Identities=13%  Similarity=0.169  Sum_probs=29.9

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      ..|||+++|+|.+|..+...|..+|+ +|+.+=..+++.
T Consensus         3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l   41 (322)
T 1t2d_A            3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   41 (322)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHH
Confidence            34799999999999998888888888 866665555443

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=88.77  E-value=0.51  Score=34.34  Aligned_cols=39  Identities=15%  Similarity=0.108  Sum_probs=31.5

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+..++++.|. +.+|..+.++|+++|++|+.+-..++
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~   44 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAE   44 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            4445567888887 99999999999999999988766544

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=88.69  E-value=0.71  Score=36.64  Aligned_cols=37  Identities=16%  Similarity=0.120  Sum_probs=31.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++|.++|.|.+|..+.+.|...|++|+++-..+++
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~  190 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPR  190 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc
Confidence            3579999999999999999998889999888766653

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=88.68  E-value=0.97  Score=35.03  Aligned_cols=37  Identities=24%  Similarity=0.111  Sum_probs=32.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .||+++|.+.-|..+..++.+.||++++|-..||.|.
T Consensus         2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~   38 (363)
T 4ffl_A            2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALI   38 (363)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTT
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChh
Confidence            4799999999999999888888999999988887664

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=88.63  E-value=0.35  Score=37.59  Aligned_cols=36  Identities=8%  Similarity=0.038  Sum_probs=31.0

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhC-CC-eEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKN-GH-SVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~-gh-eVvgVVTqPD   95 (124)
                      +.|+|++.|. |.+|..+.+.|+++ |+ +|+++.+.++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~   58 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDEL   58 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChh
Confidence            3478999995 99999999999998 97 9999887654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=88.62  E-value=0.46  Score=37.47  Aligned_cols=34  Identities=24%  Similarity=0.147  Sum_probs=28.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .||.|+|.|..|.+.-+.|+++||+|..-=..|+
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~   37 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS   37 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence            4899999999999999999999999876544433

>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*

Probab=88.59  E-value=0.22  Score=40.71  Aligned_cols=33  Identities=21%  Similarity=0.407  Sum_probs=27.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTq   93 (124)
                      +++||+++|+| ||...++++.+.  +++++||+..
T Consensus         6 ~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~   40 (372)
T 4gmf_A            6 PKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ   40 (372)
T ss_dssp             -CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC
T ss_pred             CCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC
Confidence            46999999999 899999888653  5899999864

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=88.54  E-value=0.54  Score=34.68  Aligned_cols=36  Identities=14%  Similarity=0.013  Sum_probs=30.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   42 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNRE   42 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3356788887 99999999999999999998877654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=88.48  E-value=0.36  Score=34.73  Aligned_cols=34  Identities=18%  Similarity=0.057  Sum_probs=29.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHh-CCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKK-NGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~-~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.+.|++ +|++|+.+...++
T Consensus         5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~   40 (276)
T 1wma_A            5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT   40 (276)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChH
Confidence            56788887 9999999999999 8999999887754

>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*

Probab=88.48  E-value=0.42  Score=37.97  Aligned_cols=30  Identities=23%  Similarity=0.223  Sum_probs=26.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHh-CCCeEEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKK-NGHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~-~gheVvgVV   91 (124)
                      |||+++|.|.+|..+...|.+ .||+|..+-
T Consensus         3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~   33 (404)
T 3c7a_A            3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT   33 (404)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred             ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence            899999999999999888877 499998776

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=88.34  E-value=0.65  Score=36.33  Aligned_cols=35  Identities=23%  Similarity=0.233  Sum_probs=30.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDK   96 (124)
                      |||+++|+|.+|..+...|..+|+  +|+.+-..+++
T Consensus         1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~   37 (304)
T 2v6b_A            1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDR   37 (304)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHH
Confidence            689999999999999998888888  89888666553

>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*

Probab=88.24  E-value=0.46  Score=35.68  Aligned_cols=34  Identities=18%  Similarity=0.186  Sum_probs=29.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +|||+++|.+ .+..+++++.+.||+++.+-..++
T Consensus         2 ~m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~~~   35 (334)
T 2r85_A            2 KVRIATYASH-SALQILKGAKDEGFETIAFGSSKV   35 (334)
T ss_dssp             CSEEEEESST-THHHHHHHHHHTTCCEEEESCGGG
T ss_pred             ceEEEEECCh-hHHHHHHHHHhCCCEEEEEECCCC
Confidence            4899999999 888999999999999988877654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=88.15  E-value=0.59  Score=34.43  Aligned_cols=36  Identities=22%  Similarity=0.194  Sum_probs=30.4

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.++|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   47 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVM   47 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3467888887 89999999999999999998877654

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=88.11  E-value=0.59  Score=36.14  Aligned_cols=33  Identities=21%  Similarity=0.307  Sum_probs=27.2

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC---CCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN---GHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~---gheVvgVVTq   93 (124)
                      +|||+++|+|.+|...++.|.+.   +++|+||...
T Consensus         2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~   37 (334)
T 3ohs_X            2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR   37 (334)
T ss_dssp             CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS
T ss_pred             ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC
Confidence            38999999999999999888754   2589998764

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=88.11  E-value=0.76  Score=38.22  Aligned_cols=38  Identities=8%  Similarity=0.086  Sum_probs=35.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      ++|+++|.|.+|..+.++|.+.||+|+.|=.+|++-..
T Consensus       349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~  386 (565)
T 4gx0_A          349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN  386 (565)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh
Confidence            78999999999999999999999999999999987643

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=88.03  E-value=0.72  Score=36.05  Aligned_cols=34  Identities=21%  Similarity=0.378  Sum_probs=29.3

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ++||+++|. |.+|...++.|.+.+.+++||+..-
T Consensus         3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~   37 (318)
T 3oa2_A            3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDIN   37 (318)
T ss_dssp             CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSS
T ss_pred             ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCC
Confidence            389999999 7899999999888788999988643

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=88.01  E-value=0.68  Score=34.73  Aligned_cols=36  Identities=22%  Similarity=0.143  Sum_probs=30.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   57 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEE   57 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3356788887 99999999999999999998877654

>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}

Probab=87.97  E-value=0.74  Score=35.03  Aligned_cols=33  Identities=21%  Similarity=0.233  Sum_probs=27.3

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +..++|+++|.|-.|..+--+|.++|++|+-|=
T Consensus         3 ~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle   35 (382)
T 1y56_B            3 PEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIE   35 (382)
T ss_dssp             CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred             CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence            345789999999999999989999999965443

>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2

Probab=87.91  E-value=0.91  Score=35.33  Aligned_cols=39  Identities=21%  Similarity=0.147  Sum_probs=30.7

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |++.+++|+++|.|..|..+-..|.++|++|+-+=..+.
T Consensus         1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~   39 (397)
T 2vou_A            1 MSPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ   39 (397)
T ss_dssp             -CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            444568999999999999998889889999876654443

>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*

Probab=87.84  E-value=1  Score=34.31  Aligned_cols=36  Identities=22%  Similarity=0.272  Sum_probs=29.5

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |++..+.|+++|.|-.|..+.-+|.++|++|+-|=.
T Consensus         2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~   37 (363)
T 1c0p_A            2 MMHSQKRVVVLGSGVIGLSSALILARKGYSVHILAR   37 (363)
T ss_dssp             CCCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEec
Confidence            334557899999999999888889889999876643

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=87.83  E-value=0.76  Score=35.43  Aligned_cols=33  Identities=21%  Similarity=0.367  Sum_probs=28.0

Q ss_pred             ccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEE
Q psy16773         55 SQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVV   88 (124)
Q Consensus        55 ~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVv   88 (124)
                      ++| ++.|||+++|.........+.|.+.||+|.
T Consensus         2 ~~~-~~~mki~v~~~~~~~~~~~~~L~~~g~~v~   34 (300)
T 2rir_A            2 NAM-LTGLKIAVIGGDARQLEIIRKLTEQQADIY   34 (300)
T ss_dssp             CCC-CCSCEEEEESBCHHHHHHHHHHHHTTCEEE
T ss_pred             Ccc-ccCCEEEEECCCHHHHHHHHHHHhCCCEEE
Confidence            345 456999999999999999999988899985

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=87.74  E-value=0.99  Score=33.45  Aligned_cols=37  Identities=30%  Similarity=0.309  Sum_probs=31.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +..++++.|. +.+|..+.+.|+++|++|+.+-..+++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~   43 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEK   43 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            3456788887 899999999999999999998877664

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=87.73  E-value=1.2  Score=33.31  Aligned_cols=35  Identities=14%  Similarity=0.135  Sum_probs=30.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   44 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG   44 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            56888887 999999999999999999999887765

>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}

Probab=87.66  E-value=0.77  Score=33.40  Aligned_cols=33  Identities=24%  Similarity=0.231  Sum_probs=28.8

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      .++|+++|.|..|..+...|.++|++|+-|+-+
T Consensus         4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~   36 (315)
T 3r9u_A            4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK   36 (315)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS
T ss_pred             CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Confidence            379999999999999999999889998875665

>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A

Probab=87.55  E-value=0.68  Score=38.68  Aligned_cols=35  Identities=17%  Similarity=0.306  Sum_probs=28.9

Q ss_pred             CCCceEEEEcC----CHHHHHHHHHHHhC--CCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQ----SSFAAEVYKLLKKN--GHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGT----p~FAa~iLeeLl~~--gheVvgVVTq   93 (124)
                      +++|||+++|.    |.+|...++.|.+.  +++|+||...
T Consensus        37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~   77 (479)
T 2nvw_A           37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP   77 (479)
T ss_dssp             GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS
T ss_pred             CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC
Confidence            35689999999    89999999888774  6899998763

>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*

Probab=87.47  E-value=0.6  Score=34.35  Aligned_cols=33  Identities=15%  Similarity=0.080  Sum_probs=28.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      .+++|+++|.|..|..+..+|.++|++|+-+=.
T Consensus        21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~   53 (338)
T 3itj_A           21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEG   53 (338)
T ss_dssp             CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence            347999999999999999999999999766544

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=87.46  E-value=0.82  Score=36.69  Aligned_cols=38  Identities=11%  Similarity=0.100  Sum_probs=31.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      +.|||+++|+|.+|..+...|..+++ +|+.+=..+++.
T Consensus         4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~   42 (321)
T 3p7m_A            4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMP   42 (321)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHH
Confidence            45899999999999999888888777 888877777664

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=87.45  E-value=0.61  Score=33.53  Aligned_cols=34  Identities=15%  Similarity=0.103  Sum_probs=29.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~   37 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAE   37 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            45778876 99999999999999999999887654

>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*

Probab=87.45  E-value=0.59  Score=38.93  Aligned_cols=39  Identities=13%  Similarity=0.161  Sum_probs=28.3

Q ss_pred             CccCCCCCceEEEEcCCHHHHHHHHHHHhCC-CeEEEEEc
Q psy16773         54 SSQIHKCDLRVAVIGQSSFAAEVYKLLKKNG-HSVVGVFT   92 (124)
Q Consensus        54 ~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~g-heVvgVVT   92 (124)
                      |-+-++.++||++=|.|.+|..+++.+.+++ .||++|--
T Consensus         4 ~~~~~~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd   43 (345)
T 2b4r_O            4 HHHHHMAATKLGINGFGRIGRLVFRAAFGRKDIEVVAIND   43 (345)
T ss_dssp             -------CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             ccccchhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcC
Confidence            3333557899999999999999999998764 68988854

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=87.44  E-value=0.71  Score=34.48  Aligned_cols=37  Identities=14%  Similarity=0.011  Sum_probs=30.9

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+..++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~   56 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEK   56 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            34457888887 99999999999999999998877654

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=87.40  E-value=0.81  Score=36.44  Aligned_cols=36  Identities=14%  Similarity=0.204  Sum_probs=29.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      |||+++|+|.+|..+...|..+|+ +|+.+-..+++.
T Consensus        15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l   51 (328)
T 2hjr_A           15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVP   51 (328)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHH
Confidence            799999999999998888888888 877766665543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=87.36  E-value=0.49  Score=34.06  Aligned_cols=35  Identities=11%  Similarity=0.060  Sum_probs=29.9

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++|++.|. +.+|..+.++|+++|++|+++...++
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~   41 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSD   41 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            356888887 99999999999999999999887654

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=87.33  E-value=0.89  Score=35.44  Aligned_cols=33  Identities=24%  Similarity=0.262  Sum_probs=28.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ++||+++|. |.+|...++.|.+.+.+++||+..
T Consensus         3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~   36 (312)
T 3o9z_A            3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDP   36 (312)
T ss_dssp             CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECS
T ss_pred             ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcC
Confidence            389999999 789999999998878899998853

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=87.32  E-value=0.71  Score=36.49  Aligned_cols=38  Identities=16%  Similarity=0.127  Sum_probs=29.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDKP   97 (124)
                      ++|||+++|.|.+|.+++-.|..++  .+|+.+=..+++.
T Consensus         5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~   44 (317)
T 3d0o_A            5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKV   44 (317)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHh
Confidence            5589999999999999988888766  4777776655443

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=87.30  E-value=1.6  Score=32.11  Aligned_cols=37  Identities=24%  Similarity=0.328  Sum_probs=30.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ...+++-|. +.+|..+.++|+++|++|+.+-..+++.
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~   44 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAG   44 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence            346777887 9999999999999999999988877653

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=87.24  E-value=0.96  Score=35.34  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=28.9

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +...|++.|. +.+|..+.++|+++|++|++....+
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~   39 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDI   39 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcc
Confidence            3345777786 9999999999999999999988764

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=87.18  E-value=0.85  Score=36.30  Aligned_cols=37  Identities=11%  Similarity=0.089  Sum_probs=31.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++|.++|.|.+|..+.+.|...|++|+++-..+++
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~  185 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE  185 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch
Confidence            3479999999999999999998889999887665543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=87.14  E-value=1  Score=32.81  Aligned_cols=35  Identities=9%  Similarity=0.076  Sum_probs=30.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCC---CeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNG---HSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~g---heVvgVVTqPDK   96 (124)
                      ++|++.|. +.+|..+.++|+++|   ++|+++...+++
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~   60 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ   60 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTS
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhh
Confidence            46777776 999999999999999   999999888764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=87.07  E-value=0.56  Score=36.34  Aligned_cols=35  Identities=17%  Similarity=0.097  Sum_probs=30.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++-|. +.+|..+.++|+++|++|+++..++++
T Consensus         9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~   44 (319)
T 3ioy_A            9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDS   44 (319)
T ss_dssp             CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            36788887 999999999999999999999887654

>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}

Probab=87.02  E-value=0.77  Score=35.69  Aligned_cols=35  Identities=9%  Similarity=-0.023  Sum_probs=30.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ||.++|.+..|..+.+++.+.|++++.+-..++.|
T Consensus         1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~~~~   35 (369)
T 3aw8_A            1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPSPEAC   35 (369)
T ss_dssp             CEEEECCSHHHHHHHHHHTTBTCCEEEEESCTTCG
T ss_pred             CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCh
Confidence            58999999999999999888899999988777654

>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*

Probab=87.00  E-value=0.38  Score=38.57  Aligned_cols=34  Identities=12%  Similarity=0.248  Sum_probs=28.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC--------CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN--------GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~--------gheVvgVVTq   93 (124)
                      +++||+++|.|.+|..+++.|.++        +.+|++|...
T Consensus         5 ~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~   46 (331)
T 3c8m_A            5 KTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS   46 (331)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred             cEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence            568999999999999999888653        3689998764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=86.95  E-value=0.44  Score=35.64  Aligned_cols=37  Identities=24%  Similarity=0.198  Sum_probs=31.4

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +.++|++.|. +.+|..+.++|+++|++|+++...+++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~   64 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKET   64 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            3467888888 999999999999999999998877653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=86.85  E-value=0.51  Score=34.05  Aligned_cols=34  Identities=24%  Similarity=0.266  Sum_probs=28.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +|++.|. +.+|..+.++|+++|++|+.+..++++
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~   37 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESK   37 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            3777887 899999999999999999998876653

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=86.79  E-value=0.59  Score=39.74  Aligned_cols=39  Identities=21%  Similarity=0.224  Sum_probs=27.5

Q ss_pred             CCCCCceEEEEcCCH--HHHHHHHHHHh----CCCeEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQSS--FAAEVYKLLKK----NGHSVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGTp~--FAa~iLeeLl~----~gheVvgVVTqPDK   96 (124)
                      |.+++|||+++|+|.  ||..+++.|+.    .| +|+.+=..+++
T Consensus         1 m~m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~   45 (450)
T 3fef_A            1 MSLDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEA   45 (450)
T ss_dssp             --CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHH
T ss_pred             CCCCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHH
Confidence            455779999999988  67888888775    34 77766555543

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=86.75  E-value=0.3  Score=39.30  Aligned_cols=30  Identities=27%  Similarity=0.490  Sum_probs=25.0

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      |||++.| ||.+|..+++.|.+++|++..+.
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~   31 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELR   31 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEE
Confidence            6899999 89999999999987777655443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=86.52  E-value=0.87  Score=34.21  Aligned_cols=37  Identities=22%  Similarity=0.286  Sum_probs=31.2

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +..+|++-|. +.+|..+.++|+++|++|+.+...+++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~   52 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRK   52 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4457888887 999999999999999999998877654

>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}

Probab=86.49  E-value=1.2  Score=29.03  Aligned_cols=30  Identities=23%  Similarity=0.256  Sum_probs=25.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      ..|+++|.|.-|..+-..|.++|++|+-+=
T Consensus         3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~E   32 (336)
T 3kkj_A            3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFD   32 (336)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred             CCEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence            469999999999999888999999976553

>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*

Probab=86.43  E-value=0.85  Score=37.21  Aligned_cols=34  Identities=21%  Similarity=0.132  Sum_probs=28.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCC----CeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNG----HSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~g----heVvgVVTq   93 (124)
                      ++|||+++|.|.+|..+++.|.++.    .+|++|...
T Consensus         3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~   40 (358)
T 1ebf_A            3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA   40 (358)
T ss_dssp             SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred             ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence            4589999999999999999988753    689998874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=86.41  E-value=0.87  Score=34.99  Aligned_cols=35  Identities=14%  Similarity=0.175  Sum_probs=29.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++++-|. +.+|..+.++|+++|++|+.+...+++
T Consensus        42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~   77 (293)
T 3rih_A           42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRE   77 (293)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            45667776 899999999999999999998877654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=86.36  E-value=0.89  Score=32.94  Aligned_cols=34  Identities=21%  Similarity=0.095  Sum_probs=29.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus         8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~   42 (264)
T 2pd6_A            8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRA   42 (264)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChH
Confidence            46888887 99999999999999999999877654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=86.31  E-value=0.98  Score=32.83  Aligned_cols=35  Identities=14%  Similarity=0.118  Sum_probs=29.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +++++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~   38 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE   38 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            46788887 999999999999999999998877653

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=86.28  E-value=0.51  Score=39.26  Aligned_cols=36  Identities=14%  Similarity=0.228  Sum_probs=30.0

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++|+++|+|.+|..+.+.|.+.|++|+.+-..+++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~   38 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLES   38 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHH
Confidence            368999999999999999999889998776665543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=86.25  E-value=0.59  Score=35.37  Aligned_cols=39  Identities=23%  Similarity=0.176  Sum_probs=27.3

Q ss_pred             CCCCCce-EEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLR-VAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MK-IVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |...+.| +++.|. +.+|..+.++|+++|++|+.+-..++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~   63 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLD   63 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            4433334 455565 89999999999999999998876654

>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}

Probab=86.19  E-value=0.51  Score=38.19  Aligned_cols=34  Identities=21%  Similarity=0.454  Sum_probs=28.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-------CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-------GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-------gheVvgVVTq   93 (124)
                      +++||+++|.|.+|..+++.|.++       +.+|+||...
T Consensus         3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~   43 (325)
T 3ing_A            3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS   43 (325)
T ss_dssp             CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred             ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence            568999999999999999988763       4689999764

>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}

Probab=86.08  E-value=0.71  Score=36.97  Aligned_cols=36  Identities=17%  Similarity=0.078  Sum_probs=27.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHh---CC---CeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKK---NG---HSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~---~g---heVvgVVTqPDKP   97 (124)
                      +++||++|+|+.-  .+|++|++   +|   .+|++|+++.+..
T Consensus        89 ~~~ri~vl~Sg~g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~  130 (286)
T 3n0v_A           89 HRPKVVIMVSKAD--HCLNDLLYRQRIGQLGMDVVAVVSNHPDL  130 (286)
T ss_dssp             CCCEEEEEESSCC--HHHHHHHHHHHTTSSCCEEEEEEESSSTT
T ss_pred             CCcEEEEEEeCCC--CCHHHHHHHHHCCCCCcEEEEEEeCcHHH
Confidence            4589999999763  47777764   23   6999999987654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=85.94  E-value=0.9  Score=33.97  Aligned_cols=35  Identities=20%  Similarity=0.152  Sum_probs=29.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   56 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLE   56 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            346778887 99999999999999999998877654

>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*

Probab=85.91  E-value=1.1  Score=34.31  Aligned_cols=36  Identities=14%  Similarity=0.205  Sum_probs=25.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHH--hCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLK--KNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl--~~gheVvgVVTqPDK   96 (124)
                      .+||+++|.|..|..+++++.  ..|++|+|++..-+.
T Consensus        85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~  122 (215)
T 2vt3_A           85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINES  122 (215)
T ss_dssp             --CEEEECCSHHHHHHHHCC------CCEEEEEESCTT
T ss_pred             CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHH
Confidence            478999999999999998532  347999999984433

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=85.91  E-value=2.1  Score=32.00  Aligned_cols=39  Identities=8%  Similarity=0.034  Sum_probs=32.5

Q ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         58 HKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        58 ~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+..++++-|. +.+|..+.++|+++|++|+.+...+++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~   42 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVA   42 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchh
Confidence            334467888887 999999999999999999998887764

>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}

Probab=85.85  E-value=1.1  Score=36.30  Aligned_cols=38  Identities=21%  Similarity=0.186  Sum_probs=27.5

Q ss_pred             CccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         54 SSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        54 ~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +..|.+....|+++|.|..|..+...|.+.|++|+-|=
T Consensus        19 ~~~M~~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liE   56 (484)
T 3o0h_A           19 PGSMGSFDFDLFVIGSGSGGVRAARLAGALGKRVAIAE   56 (484)
T ss_dssp             -----CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCcCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEe
Confidence            33354445689999999999999889999999876553

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=85.78  E-value=0.9  Score=33.58  Aligned_cols=36  Identities=19%  Similarity=0.138  Sum_probs=30.1

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   48 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSE   48 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3456888887 99999999999999999998877654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=85.75  E-value=0.78  Score=34.37  Aligned_cols=36  Identities=19%  Similarity=0.209  Sum_probs=29.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~   79 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQK   79 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence            3457888887 99999999999999999998665544

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=85.55  E-value=0.3  Score=37.83  Aligned_cols=35  Identities=17%  Similarity=0.055  Sum_probs=29.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +++|+++|.|.+|..+.++|.++|+ |+.|-.+|++
T Consensus       115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~  149 (336)
T 1lnq_A          115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVR  149 (336)
T ss_dssp             -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGH
T ss_pred             cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhh
Confidence            4689999999999999999998898 8888666654

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=85.54  E-value=1.3  Score=36.89  Aligned_cols=33  Identities=24%  Similarity=0.248  Sum_probs=29.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +||+|+|.|.+|..+...|.++||+|+.+-..+
T Consensus        38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~   70 (463)
T 1zcj_A           38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP   70 (463)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence            689999999999999999999999998775544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=85.46  E-value=0.68  Score=34.27  Aligned_cols=36  Identities=25%  Similarity=0.219  Sum_probs=29.4

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~   65 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK   65 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            346777776 999999999999999999888766543

>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}

Probab=85.34  E-value=1  Score=34.68  Aligned_cols=36  Identities=25%  Similarity=0.254  Sum_probs=27.8

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ++.+++|+++|.|..|..+-..|.++|++|+-+=..
T Consensus         2 ~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~   37 (421)
T 3nix_A            2 QREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQ   37 (421)
T ss_dssp             --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             CCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            334478999999999998888888889987655433

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=85.33  E-value=1.4  Score=32.93  Aligned_cols=37  Identities=14%  Similarity=0.207  Sum_probs=30.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      .++++-|. +.+|..+.++|+++|++|+.+...+++..
T Consensus        29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~   66 (260)
T 3un1_A           29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA   66 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc
Confidence            45777776 89999999999999999999988776543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=85.32  E-value=1  Score=33.48  Aligned_cols=36  Identities=17%  Similarity=0.085  Sum_probs=30.2

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   43 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEE   43 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            356888887 999999999999999999988776543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=85.31  E-value=1  Score=32.53  Aligned_cols=26  Identities=15%  Similarity=0.286  Sum_probs=23.2

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGH   85 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gh   85 (124)
                      +.|||++.|. |.+|..++++|+++||
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~   31 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG   31 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence            4589999996 9999999999999886

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=85.23  E-value=0.32  Score=37.25  Aligned_cols=33  Identities=12%  Similarity=0.145  Sum_probs=25.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC--------CCeEEEEEc
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN--------GHSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~--------gheVvgVVT   92 (124)
                      +++||+++|.|.+|...++.+.+.        +.+|+||..
T Consensus         5 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d   45 (390)
T 4h3v_A            5 TNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCG   45 (390)
T ss_dssp             CEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEEC
T ss_pred             CcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEc
Confidence            568999999999999887776532        237888765

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=85.21  E-value=0.69  Score=34.25  Aligned_cols=34  Identities=18%  Similarity=0.249  Sum_probs=29.0

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhC--CCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKN--GHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~--gheVvgVVTqPDK   96 (124)
                      ||++.|. |.+|..+.++|+++  ||+|+++...+++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~   37 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD   37 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcc
Confidence            5788885 99999999999988  7999998876654

>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2

Probab=85.11  E-value=1.2  Score=35.65  Aligned_cols=38  Identities=18%  Similarity=0.103  Sum_probs=22.0

Q ss_pred             cCCCCCceEEEEcCCHHHHHHHHHHHh-CCCeEEEEEcCCCCC
Q psy16773         56 QIHKCDLRVAVIGQSSFAAEVYKLLKK-NGHSVVGVFTVVDKA   97 (124)
Q Consensus        56 ~M~~k~MKIVFmGTp~FAa~iLeeLl~-~gheVvgVVTqPDKP   97 (124)
                      +-++++|||.++|+|.-...+..++.+ .| +|+.+   |++|
T Consensus        10 ~~~~~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~---~~np   48 (412)
T 1vkz_A           10 HHHMKAVRVHILGSGGREHAIGWAFAKQGY-EVHFY---PGNA   48 (412)
T ss_dssp             ------CEEEEEECSHHHHHHHHHHHHTTC-EEEEE---ECCT
T ss_pred             hhccccCEEEEECCCHHHHHHHHHHHhCCC-CEEEE---CCCh
Confidence            345688999999999655555555544 46 77666   5544

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=85.06  E-value=1  Score=33.17  Aligned_cols=34  Identities=18%  Similarity=0.068  Sum_probs=29.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.++|+++|++|+++..+++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   42 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLE   42 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHH
Confidence            46888887 99999999999999999998877654

>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O

Probab=85.05  E-value=1  Score=36.67  Aligned_cols=31  Identities=13%  Similarity=0.225  Sum_probs=27.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      +||++.|.|.+|..+++.|.++ +.||++|.-
T Consensus         4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d   35 (337)
T 3e5r_O            4 IKIGINGFGRIGRLVARVALQSEDVELVAVND   35 (337)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             eEEEEECcCHHHHHHHHHHhCCCCeEEEEEEC
Confidence            7999999999999999998875 579999865

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=84.91  E-value=2.4  Score=31.06  Aligned_cols=33  Identities=9%  Similarity=0.081  Sum_probs=29.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+...+
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   41 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVP   41 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence            56888887 9999999999999999999988776

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=84.86  E-value=0.53  Score=40.12  Aligned_cols=36  Identities=19%  Similarity=0.103  Sum_probs=32.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+|.++|.|-+|.+.--.|.+.||+|+||=.+++|.
T Consensus        22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV   57 (444)
T 3vtf_A           22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIV   57 (444)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred             CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence            589999999999999888888899999998877764

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=84.77  E-value=0.95  Score=36.10  Aligned_cols=35  Identities=20%  Similarity=0.158  Sum_probs=29.9

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +.++|+++|.|..|..-++.|++.|++|+-|-..+
T Consensus        12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~   46 (274)
T 1kyq_A           12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL   46 (274)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence            45899999999999999999999999988665443

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=84.77  E-value=0.78  Score=35.86  Aligned_cols=34  Identities=15%  Similarity=0.154  Sum_probs=26.7

Q ss_pred             CceEEEEcCCHHHH-HHHHHHHhC-CCeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAA-EVYKLLKKN-GHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa-~iLeeLl~~-gheVvgVVTqP   94 (124)
                      +|||+++|.|.+|. ..+..|.+. +++|+||+..-
T Consensus         2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~   37 (349)
T 3i23_A            2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH   37 (349)
T ss_dssp             CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT
T ss_pred             eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC
Confidence            38999999999998 566666543 68999998743

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=84.73  E-value=1.1  Score=33.25  Aligned_cols=31  Identities=16%  Similarity=0.211  Sum_probs=24.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |+|++.|. |.+|..+.++|+++| +++.+...
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~   33 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNL   33 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcC
Confidence            57999996 999999999999998 55555543

>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}

Probab=84.71  E-value=0.83  Score=36.61  Aligned_cols=35  Identities=17%  Similarity=0.335  Sum_probs=31.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .||+++|.+..|..+++++.+.|+++++|.+.+|.
T Consensus         2 k~ilI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~   36 (451)
T 2vpq_A            2 KKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDK   36 (451)
T ss_dssp             CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGT
T ss_pred             ceEEEeCCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence            47999999999999999999999999999987764

>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}

Probab=84.55  E-value=0.93  Score=36.02  Aligned_cols=33  Identities=9%  Similarity=0.196  Sum_probs=27.7

Q ss_pred             CceEEEEcCC-HHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         61 DLRVAVIGQS-SFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp-~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      +|||+++|.| .++...++.|.+. +.+++||+..
T Consensus         2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~   36 (387)
T 3moi_A            2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP   36 (387)
T ss_dssp             CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS
T ss_pred             ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC
Confidence            4899999999 8888888888764 5799998864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=84.51  E-value=1.3  Score=33.10  Aligned_cols=39  Identities=15%  Similarity=0.111  Sum_probs=31.1

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+..++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   64 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST   64 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            3334456777777 99999999999999999998877664

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=84.47  E-value=1.9  Score=32.39  Aligned_cols=37  Identities=16%  Similarity=0.238  Sum_probs=26.1

Q ss_pred             CceEEEEcCC----H------HHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQS----S------FAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp----~------FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +|||+|+...    .      ......++|.++||+|.-+....+..
T Consensus         2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~   48 (439)
T 3fro_A            2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRF   48 (439)
T ss_dssp             CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCS
T ss_pred             ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCc
Confidence            5999998741    1      34456677888999998888665543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=84.46  E-value=1.7  Score=32.22  Aligned_cols=38  Identities=21%  Similarity=0.197  Sum_probs=30.9

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |..+..+|++.|. +.+|..+.++|+++|++|+.+....
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~   63 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN   63 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4444457888887 9999999999999999999888744

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=84.42  E-value=1.2  Score=35.49  Aligned_cols=39  Identities=18%  Similarity=0.236  Sum_probs=29.7

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCCC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDKA   97 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDKP   97 (124)
                      +++|||+++|+|.+|..++-.|+.+++  ||+.+=..+++.
T Consensus         3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~   43 (318)
T 1ez4_A            3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (318)
T ss_dssp             TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHH
Confidence            345899999999999998888877664  777766655443

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=84.30  E-value=0.94  Score=34.56  Aligned_cols=35  Identities=14%  Similarity=0.039  Sum_probs=29.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~   67 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPA   67 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            46888887 899999999999999999988776553

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=84.27  E-value=1  Score=33.36  Aligned_cols=34  Identities=29%  Similarity=0.343  Sum_probs=29.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+|++.|. +.+|..+.++|+++|++|+++...++
T Consensus        33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~   67 (279)
T 1xg5_A           33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVG   67 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChH
Confidence            46788877 99999999999999999999887654

>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}

Probab=84.26  E-value=1.2  Score=32.85  Aligned_cols=32  Identities=25%  Similarity=0.234  Sum_probs=27.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      ++|+++|.|..|..+..+|.++|++|+-+=..
T Consensus         4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~   35 (357)
T 4a9w_A            4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAE   35 (357)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHSSCCEEEECCS
T ss_pred             CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence            68999999999999999999999997655433

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=84.16  E-value=1.4  Score=34.65  Aligned_cols=35  Identities=14%  Similarity=0.152  Sum_probs=28.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDK   96 (124)
                      |||+++|+|.+|..+...|...|+ +|+.+=..+++
T Consensus         3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~   38 (309)
T 1ur5_A            3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGV   38 (309)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccH
Confidence            799999999999999998888886 86555445443

>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2

Probab=84.13  E-value=0.58  Score=37.51  Aligned_cols=36  Identities=19%  Similarity=0.344  Sum_probs=31.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .||+++|.+..|..+++++.+.|+++++|.+.+|..
T Consensus         3 k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~   38 (451)
T 1ulz_A            3 NKVLVANRGEIAVRIIRACKELGIPTVAIYNEVEST   38 (451)
T ss_dssp             SSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTT
T ss_pred             ceEEEECCcHHHHHHHHHHHHcCCeEEEEechhhcc
Confidence            469999999999999999988899999999877743

>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}

Probab=84.12  E-value=0.89  Score=36.92  Aligned_cols=34  Identities=21%  Similarity=0.431  Sum_probs=28.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC---------CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN---------GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~---------gheVvgVVTq   93 (124)
                      +++||+++|.|.+|..+++.|.++         +.+|++|...
T Consensus         2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~   44 (332)
T 2ejw_A            2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR   44 (332)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS
T ss_pred             CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC
Confidence            358999999999999999988764         3688898874

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=84.07  E-value=2  Score=31.90  Aligned_cols=36  Identities=22%  Similarity=0.183  Sum_probs=24.2

Q ss_pred             CCceEEEEcCC---------------H------HHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQS---------------S------FAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp---------------~------FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++|||+++...               .      +.....++|.++||+|.-+....+
T Consensus         2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~   58 (342)
T 2iuy_A            2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGS   58 (342)
T ss_dssp             -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTS
T ss_pred             CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence            35899998865               1      334566777778999876665544

>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}

Probab=84.03  E-value=0.54  Score=39.36  Aligned_cols=42  Identities=19%  Similarity=0.226  Sum_probs=27.5

Q ss_pred             CccCCCCCceEEEEcCCHHHHHHHHHHHhCCC--------eEEEEEcCCC
Q psy16773         54 SSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGH--------SVVGVFTVVD   95 (124)
Q Consensus        54 ~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gh--------eVvgVVTqPD   95 (124)
                      +.....+++||.++|+|.||..+-..|.++||        +|..-...++
T Consensus        27 ~~~~~~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e   76 (391)
T 4fgw_A           27 SLKAAEKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEE   76 (391)
T ss_dssp             ------CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCB
T ss_pred             cccccCCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchH
Confidence            33345567899999999999988887877654        3655555544

>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1

Probab=84.02  E-value=1.1  Score=36.23  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=27.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      +||++.|.|.+|..+++.|.++ +.||++|.-
T Consensus         4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d   35 (335)
T 1u8f_O            4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIND   35 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred             eEEEEEccCHHHHHHHHHHHcCCCcEEEEecC
Confidence            7999999999999999998864 589999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=83.96  E-value=2.2  Score=32.20  Aligned_cols=37  Identities=16%  Similarity=0.167  Sum_probs=31.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +..++++-|. +.+|..+.++|+++|++|+.+...+++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~   68 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDA   68 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            4467888887 999999999999999999988876654

>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...

Probab=83.89  E-value=0.63  Score=37.26  Aligned_cols=35  Identities=17%  Similarity=0.321  Sum_probs=31.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .||+++|.+..|..+++++.+.|+++++|.+.+|.
T Consensus         3 k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~   37 (449)
T 2w70_A            3 DKIVIANRGEIALRILRACKELGIKTVAVHSSADR   37 (449)
T ss_dssp             SEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGT
T ss_pred             ceEEEeCCcHHHHHHHHHHHHcCCeEEEEeccccc
Confidence            37999999999999999998889999999987763

>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*

Probab=83.80  E-value=1.4  Score=33.52  Aligned_cols=38  Identities=16%  Similarity=0.138  Sum_probs=30.2

Q ss_pred             cCCCCCceEEEEcCCHHHHHHHHHHHh-CC-CeEEEEEcC
Q psy16773         56 QIHKCDLRVAVIGQSSFAAEVYKLLKK-NG-HSVVGVFTV   93 (124)
Q Consensus        56 ~M~~k~MKIVFmGTp~FAa~iLeeLl~-~g-heVvgVVTq   93 (124)
                      +|....++|+++|.|-.|..+--+|.+ +| ++|+-|=..
T Consensus        16 ~~~~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~   55 (405)
T 2gag_B           16 PEPKKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKG   55 (405)
T ss_dssp             CCCCSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSS
T ss_pred             CCCCCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            355556899999999999999888988 89 888655433

>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*

Probab=83.78  E-value=2.6  Score=32.67  Aligned_cols=35  Identities=20%  Similarity=0.102  Sum_probs=29.1

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ++++|+++|.|..|..+-..|.++|++|+-+=..+
T Consensus        22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~   56 (407)
T 3rp8_A           22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK   56 (407)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            45899999999999999888999999987665544

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=83.78  E-value=0.95  Score=33.06  Aligned_cols=36  Identities=8%  Similarity=0.085  Sum_probs=30.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++|++.|. +.+|..+.++|+++|++|+.+..++++
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   42 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESK   42 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            356788887 999999999999999999988776543

>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}

Probab=83.76  E-value=1.5  Score=32.89  Aligned_cols=31  Identities=26%  Similarity=0.260  Sum_probs=26.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCC-eEEEEE
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVF   91 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVV   91 (124)
                      .++|+++|.|..|..+...|.+.|+ +|+-|=
T Consensus         4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie   35 (369)
T 3d1c_A            4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILE   35 (369)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEC
T ss_pred             cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEe
Confidence            4789999999999999999998898 776553

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=83.75  E-value=0.6  Score=37.11  Aligned_cols=36  Identities=14%  Similarity=0.058  Sum_probs=30.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDKP   97 (124)
                      |||+++|+|.+|..+...|..+++  +|+.+-..+++.
T Consensus         1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~   38 (294)
T 1oju_A            1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLA   38 (294)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHH
Confidence            799999999999999888888777  888877766653

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=83.74  E-value=0.68  Score=38.52  Aligned_cols=38  Identities=18%  Similarity=0.232  Sum_probs=33.4

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+++|+++|.|.+|..+.++|.+.|++|+.|-.+|++.
T Consensus       126 ~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~  163 (565)
T 4gx0_A          126 TRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQA  163 (565)
T ss_dssp             CCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHH
T ss_pred             cCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            35789999999999999999998899999998887653

>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*

Probab=83.73  E-value=0.75  Score=34.19  Aligned_cols=32  Identities=9%  Similarity=0.059  Sum_probs=27.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      ..++|+++|.|..|..+...|.+.|++|+-+=
T Consensus         7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie   38 (333)
T 1vdc_A            7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFE   38 (333)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEe
Confidence            34789999999999999999988899876553

>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*

Probab=83.63  E-value=1.4  Score=36.43  Aligned_cols=32  Identities=13%  Similarity=0.121  Sum_probs=27.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      ++||++.|.|.+|..+++.|.++ ..||++|-.
T Consensus        17 ~ikVgI~G~G~iGr~llR~l~~~p~veivaind   49 (354)
T 3cps_A           17 QGTLGINGFGRIGRLVLRACMERNDITVVAIND   49 (354)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEEC
T ss_pred             ceEEEEECCCHHHHHHHHHHHcCCCeEEEEecC
Confidence            37999999999999999999876 589999875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=83.63  E-value=1.3  Score=32.65  Aligned_cols=35  Identities=20%  Similarity=0.172  Sum_probs=29.8

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   40 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDE   40 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            356888887 99999999999999999998877654

>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*

Probab=83.62  E-value=1.7  Score=31.54  Aligned_cols=31  Identities=10%  Similarity=-0.002  Sum_probs=26.7

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +++|+++|.|..|..+...|.++|++|+-+=
T Consensus        15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie   45 (323)
T 3f8d_A           15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIG   45 (323)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ccCEEEECccHHHHHHHHHHHHCCCcEEEEe
Confidence            3689999999999999999999999976553

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=83.60  E-value=0.79  Score=33.26  Aligned_cols=33  Identities=12%  Similarity=0.117  Sum_probs=28.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc-CC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT-VV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT-qP   94 (124)
                      ++|++.|. +.+|..+.++|+++|++|+.+.. ++
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~   42 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE   42 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCCh
Confidence            56788876 99999999999999999998876 44

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=83.57  E-value=1.7  Score=35.06  Aligned_cols=37  Identities=14%  Similarity=0.071  Sum_probs=31.1

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++|.|+|.|.+|..+.+.|...|++|.+.-..+++
T Consensus       163 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~  199 (333)
T 3ba1_A          163 SGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKP  199 (333)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchh
Confidence            3478999999999999999998889999887665554

>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}

Probab=83.51  E-value=1.7  Score=35.79  Aligned_cols=38  Identities=18%  Similarity=0.295  Sum_probs=33.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +.+||+++|-|.=...+|+.|.+..+++++|||--|.-
T Consensus         3 ~~~~IV~igGGtGl~~ll~gLk~~~~~iTaIVtvaDDG   40 (326)
T 2q7x_A            3 RXPXITVIGGGTGSPVILXSLREXDVEIAAIVTVADDG   40 (326)
T ss_dssp             CCCEEEEECCCTTHHHHHHHHHHSSCEEEEEECCBSCG
T ss_pred             CCCeEEEEcCcccHHHHHHHhccCCCCeEEEEECccCC
Confidence            45899999999878889999988788999999999964

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=83.35  E-value=0.29  Score=37.14  Aligned_cols=29  Identities=14%  Similarity=0.232  Sum_probs=21.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      |||.|+|.|.+|..+.+.|.+. |+|++|+
T Consensus         3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~   31 (276)
T 2i76_A            3 LVLNFVGTGTLTRFFLECLKDR-YEIGYIL   31 (276)
T ss_dssp             -CCEEESCCHHHHHHHHTTC-----CCCEE
T ss_pred             ceEEEEeCCHHHHHHHHHHHHc-CcEEEEE
Confidence            7999999999999999888877 8886554

>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}

Probab=83.28  E-value=0.44  Score=37.02  Aligned_cols=32  Identities=25%  Similarity=0.331  Sum_probs=27.3

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +|||+++|+|.++...++.| ..+.+|+||...
T Consensus         2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~   33 (337)
T 3ip3_A            2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPG   33 (337)
T ss_dssp             CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECS
T ss_pred             ceEEEEEccchhHHHHHHhc-CCCcEEEEEecC
Confidence            38999999999998888877 667899999964

>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}

Probab=83.27  E-value=1.5  Score=36.86  Aligned_cols=31  Identities=19%  Similarity=0.430  Sum_probs=27.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      ++||++-|-|.+|..+|+.|.+++.+|++|=
T Consensus        21 ~~kVaInGfGrIGr~vlr~l~e~~~~ivaIn   51 (356)
T 3hja_A           21 SMKLAINGFGRIGRNVFKIAFERGIDIVAIN   51 (356)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence            5899999999999999999998889999883

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=83.25  E-value=0.45  Score=40.51  Aligned_cols=41  Identities=10%  Similarity=0.092  Sum_probs=28.4

Q ss_pred             CCCCCceEEEEcCCHH-HHHHHHHHHhC-----CCeEEEEEcCCCCC
Q psy16773         57 IHKCDLRVAVIGQSSF-AAEVYKLLKKN-----GHSVVGVFTVVDKA   97 (124)
Q Consensus        57 M~~k~MKIVFmGTp~F-Aa~iLeeLl~~-----gheVvgVVTqPDKP   97 (124)
                      |++++|||+++|+|.+ +..+...|+.+     +++|+.+-..+++.
T Consensus        24 m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~   70 (472)
T 1u8x_X           24 MKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQ   70 (472)
T ss_dssp             --CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHH
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHH
Confidence            5455689999999887 44444567766     56888887777654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=83.23  E-value=0.61  Score=34.34  Aligned_cols=34  Identities=15%  Similarity=-0.005  Sum_probs=27.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++++.|. +.+|..+.+.|+++|++|+.+..++++
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   37 (254)
T 1zmt_A            3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ   37 (254)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGS
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            3666676 899999999999999999988776553

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=83.19  E-value=1.4  Score=32.37  Aligned_cols=38  Identities=24%  Similarity=0.131  Sum_probs=28.0

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |..+...+++-|. +.+|..+.++|+++|++|+.+....
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~   43 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG   43 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch
Confidence            4444456778887 9999999999999999998887643

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=83.19  E-value=0.89  Score=34.73  Aligned_cols=35  Identities=17%  Similarity=0.163  Sum_probs=29.3

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~   61 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED   61 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            356777777 99999999999999999998877654

>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*

Probab=83.09  E-value=1.8  Score=34.40  Aligned_cols=32  Identities=19%  Similarity=0.267  Sum_probs=27.1

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      +|+|+++|.|-.|..+...|.++|++|+-+=.
T Consensus         3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~   34 (384)
T 2bi7_A            3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQ   34 (384)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred             cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEe
Confidence            48999999999999998888888998765544

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=83.07  E-value=1.1  Score=32.24  Aligned_cols=35  Identities=20%  Similarity=0.150  Sum_probs=29.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~   49 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEA   49 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHH
Confidence            356788887 99999999999999999988877654

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=83.06  E-value=1.6  Score=34.48  Aligned_cols=33  Identities=21%  Similarity=0.199  Sum_probs=28.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCC--CeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNG--HSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~g--heVvgVVTqP   94 (124)
                      |||+++|+ |.+|..+...|+.++  ++|+.+-..+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            79999998 999999998888877  6888876655

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=83.03  E-value=2  Score=32.66  Aligned_cols=33  Identities=15%  Similarity=0.144  Sum_probs=24.8

Q ss_pred             CCceEEEEcCCHHHH-----HHHHHHHhCCCeEEEEEc
Q psy16773         60 CDLRVAVIGQSSFAA-----EVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGTp~FAa-----~iLeeLl~~gheVvgVVT   92 (124)
                      .+|||+|++.+..|.     .+.++|.++||+|.-+.+
T Consensus        19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~   56 (412)
T 3otg_A           19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATG   56 (412)
T ss_dssp             CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred             ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEcc
Confidence            459999998765443     567888889999876654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=83.01  E-value=1.5  Score=33.15  Aligned_cols=39  Identities=26%  Similarity=0.190  Sum_probs=31.1

Q ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |..+..++++-|. +.+|..+.++|+++|++|+.+-..++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~   62 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNED   62 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3434456777887 99999999999999999988876654

>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*

Probab=82.96  E-value=1.7  Score=32.95  Aligned_cols=31  Identities=16%  Similarity=0.180  Sum_probs=26.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      ++|+++|.|-.|..+-.+|.++|++|+-|=.
T Consensus        18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~   48 (382)
T 1ryi_A           18 YEAVVIGGGIIGSAIAYYLAKENKNTALFES   48 (382)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             CCEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence            6899999999999998899999999765543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=82.96  E-value=1.5  Score=32.84  Aligned_cols=36  Identities=22%  Similarity=0.265  Sum_probs=30.3

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+++++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~   42 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERL   42 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            356888887 999999999999999999998776653

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=82.95  E-value=1.2  Score=35.80  Aligned_cols=36  Identities=25%  Similarity=0.256  Sum_probs=30.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDKP   97 (124)
                      |||+++|+|.+|..+...|+.+++  +|+.+=..+++.
T Consensus         1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~   38 (314)
T 3nep_X            1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMP   38 (314)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHH
Confidence            799999999999999988887775  888877777654

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=82.91  E-value=2.3  Score=33.57  Aligned_cols=37  Identities=19%  Similarity=0.121  Sum_probs=24.7

Q ss_pred             CCCceEEEEcC-----------------C---HHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQ-----------------S---SFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGT-----------------p---~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +++|||+++..                 |   .+.....++|.++||+|.-+...++
T Consensus         5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~   61 (499)
T 2r60_A            5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIK   61 (499)
T ss_dssp             --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred             cccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCC
Confidence            34599999985                 2   2334566777788999987766544

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=82.87  E-value=1.7  Score=34.52  Aligned_cols=33  Identities=21%  Similarity=0.198  Sum_probs=28.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +||+|+|.|..|..+-..|+ .||+|+..=..++
T Consensus        13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~   45 (293)
T 1zej_A           13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK   45 (293)
T ss_dssp             CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred             CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence            78999999999999999999 9999987755443

>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*

Probab=82.84  E-value=0.98  Score=33.25  Aligned_cols=30  Identities=7%  Similarity=0.080  Sum_probs=25.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEE
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgV   90 (124)
                      .++|+++|.|.-|..+...|.+.|++|+-+
T Consensus         5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li   34 (320)
T 1trb_A            5 HSKLLILGSGPAGYTAAVYAARANLQPVLI   34 (320)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHTTTCCCEEE
T ss_pred             cCCEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence            478999999999999999998889987644

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=82.82  E-value=1.1  Score=32.89  Aligned_cols=35  Identities=14%  Similarity=0.145  Sum_probs=29.6

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   49 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQE   49 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            356777777 99999999999999999999877654

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=82.81  E-value=1.8  Score=34.52  Aligned_cols=36  Identities=11%  Similarity=0.096  Sum_probs=30.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++|.++|.|.+|..+.+.|...|++|++.-..++
T Consensus       145 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~  180 (333)
T 2d0i_A          145 YGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRK  180 (333)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             CcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence            457899999999999999998888999987766554

>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}

Probab=82.80  E-value=1.6  Score=33.69  Aligned_cols=38  Identities=26%  Similarity=0.231  Sum_probs=28.8

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |...+++|+++|.|..|..+-..|.++|++|+-+=..+
T Consensus         2 M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~   39 (399)
T 2x3n_A            2 MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR   39 (399)
T ss_dssp             ---CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CCCCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence            33345789999999999998888988999987665443

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=82.80  E-value=2.3  Score=31.31  Aligned_cols=34  Identities=21%  Similarity=0.195  Sum_probs=29.3

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ..+|++.|. +.+|..+.++|+++|++|+.+..++
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   53 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE   53 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            357888887 9999999999999999999887654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=82.67  E-value=2.6  Score=33.73  Aligned_cols=37  Identities=16%  Similarity=0.195  Sum_probs=31.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++|.++|.|.+|..+.+.|...|++|++.-..+.+
T Consensus       138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~  174 (315)
T 3pp8_A          138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKS  174 (315)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence            3579999999999999999988889999998766653

>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}

Probab=82.59  E-value=2  Score=31.77  Aligned_cols=33  Identities=24%  Similarity=0.371  Sum_probs=27.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      .+.|+++|.|-.|..+--+|.++|++|+-+=..
T Consensus         4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~   36 (369)
T 3dme_A            4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAA   36 (369)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence            478999999999999988999999998655443

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=82.54  E-value=1.6  Score=33.74  Aligned_cols=32  Identities=22%  Similarity=0.228  Sum_probs=28.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +.++|+++|.|+.|..-++.|++.|.+|+-|-
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVva   61 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVA   61 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCCCEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence            45789999999999999999999999887554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=82.52  E-value=1.6  Score=32.64  Aligned_cols=35  Identities=20%  Similarity=0.153  Sum_probs=29.7

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++++.|. +.+|..+.++|+++|++|+.+-.+++
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   44 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDES   44 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            356888887 99999999999999999998877654

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=82.51  E-value=2.5  Score=33.44  Aligned_cols=37  Identities=19%  Similarity=0.117  Sum_probs=31.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++|.|+|.|.+|..+.+.|...|++|.+.-..+++
T Consensus       143 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~  179 (311)
T 2cuk_A          143 QGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKP  179 (311)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcc
Confidence            4578999999999999999998889999877665554

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=82.44  E-value=1.6  Score=32.91  Aligned_cols=36  Identities=11%  Similarity=0.105  Sum_probs=29.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..++++.|. +.+|..+.++|+++|++|+.+-..++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~   40 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAE   40 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHH
Confidence            3456778887 99999999999999999998876554

>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*

Probab=82.40  E-value=2.9  Score=28.58  Aligned_cols=33  Identities=18%  Similarity=0.129  Sum_probs=29.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ++|+++|.|..|..+...|.+.|.+|+-|-..+
T Consensus         2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~   34 (180)
T 2ywl_A            2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR   34 (180)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            689999999999999999999899988777655

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=82.37  E-value=2.1  Score=31.31  Aligned_cols=34  Identities=18%  Similarity=0.108  Sum_probs=28.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~   39 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP   39 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            46777887 99999999999999999988876654

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=82.37  E-value=0.77  Score=35.17  Aligned_cols=36  Identities=19%  Similarity=0.159  Sum_probs=28.9

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +.+||+++|+|..|..+...|.+.|++|..+-..++
T Consensus       128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~  163 (275)
T 2hk9_A          128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKE  163 (275)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHH
Confidence            347999999999999999999988887765544443

>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}

Probab=82.22  E-value=1.6  Score=32.90  Aligned_cols=38  Identities=8%  Similarity=-0.051  Sum_probs=27.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-C-CeEEEEEcCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-G-HSVVGVFTVVDKAN   98 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-g-heVvgVVTqPDKP~   98 (124)
                      ++|||+++|.|.. ..+.+.|.+. | ++|+++-..|+.+.
T Consensus         3 ~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~~~~~~   42 (331)
T 2pn1_A            3 QKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCSPLASA   42 (331)
T ss_dssp             TCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESCTTCGG
T ss_pred             ccceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCCCcchh
Confidence            4589999999754 3445556554 5 89999988877653

>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}

Probab=82.21  E-value=1.5  Score=37.19  Aligned_cols=35  Identities=14%  Similarity=0.232  Sum_probs=27.9

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHh----------CCCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKK----------NGHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~----------~gheVvgVVTq   93 (124)
                      ++++||+++|.|.+|..+++.|.+          .+.+|++|...
T Consensus         8 Mk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~   52 (444)
T 3mtj_A            8 MKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR   52 (444)
T ss_dssp             CSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS
T ss_pred             hCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC
Confidence            356999999999999988876653          35789998864

>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}

Probab=82.18  E-value=1.5  Score=34.10  Aligned_cols=34  Identities=15%  Similarity=0.174  Sum_probs=26.2

Q ss_pred             CceEEEEcCCHHHHH-HHHHHHh--CCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAE-VYKLLKK--NGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~-iLeeLl~--~gheVvgVVTqP   94 (124)
                      +|||+++|.|.+|.. .+..++.  .+++|++|+..-
T Consensus         2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~   38 (345)
T 3f4l_A            2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRH   38 (345)
T ss_dssp             CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSS
T ss_pred             ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCC
Confidence            389999999999986 5663433  368999998753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=82.18  E-value=1.1  Score=33.12  Aligned_cols=34  Identities=12%  Similarity=0.122  Sum_probs=28.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+..+++
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   41 (278)
T 1spx_A            7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAE   41 (278)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            45777776 99999999999999999999887764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=82.16  E-value=0.67  Score=35.07  Aligned_cols=34  Identities=18%  Similarity=0.190  Sum_probs=28.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+...++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~   56 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREE   56 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            45777777 89999999999999999998877654

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=82.04  E-value=2  Score=33.97  Aligned_cols=36  Identities=11%  Similarity=0.120  Sum_probs=30.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++|.|+|.|.+|..+.+.|...|++|+++-..++
T Consensus       141 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~  176 (313)
T 2ekl_A          141 AGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDI  176 (313)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence            447999999999999999999888999987765554

>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*

Probab=82.02  E-value=1.9  Score=31.82  Aligned_cols=33  Identities=21%  Similarity=0.138  Sum_probs=26.8

Q ss_pred             CceEEEEcCCH---------HHHHHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQSS---------FAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~---------FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      +|||+++|.|.         -|..++++|.+.||+|+.+-..
T Consensus         2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~   43 (306)
T 1iow_A            2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK   43 (306)
T ss_dssp             CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence            38999999875         5678888888899999887655

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=81.99  E-value=1.4  Score=32.30  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=29.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+-.++++
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~   39 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQR   39 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            35778887 999999999999999999988776543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=81.94  E-value=1.6  Score=31.36  Aligned_cols=34  Identities=15%  Similarity=0.263  Sum_probs=28.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ++++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   38 (235)
T 3l77_A            4 VAVITGASRGIGEAIARALARDGYALALGARSVDR   38 (235)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            4677787 899999999999999999888776553

>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}

Probab=81.83  E-value=1.6  Score=35.58  Aligned_cols=31  Identities=23%  Similarity=0.304  Sum_probs=27.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      +||++.|.|.+|..+++.|.++ +.+|+||.-
T Consensus         3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d   34 (343)
T 2yyy_A            3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTK   34 (343)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEE
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCceEEEEec
Confidence            7999999999999999998876 589999864

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=81.79  E-value=1.3  Score=33.27  Aligned_cols=34  Identities=24%  Similarity=0.222  Sum_probs=29.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..+++-|. +.+|..+.++|+++|++|+.+-..++
T Consensus        25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~   59 (279)
T 3sju_A           25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAK   59 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46777887 99999999999999999998877654

>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}

Probab=81.78  E-value=2.4  Score=30.48  Aligned_cols=31  Identities=19%  Similarity=0.158  Sum_probs=27.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      ++|+++|.|..|..+...|.++|++|+-+=.
T Consensus         3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~   33 (297)
T 3fbs_A            3 FDVIIIGGSYAGLSAALQLGRARKNILLVDA   33 (297)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence            6899999999999999999999999876653

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=81.77  E-value=2.9  Score=31.10  Aligned_cols=33  Identities=21%  Similarity=0.113  Sum_probs=21.5

Q ss_pred             CceEEEEcCCHHHH-----HHHHHHHhCCCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAA-----EVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa-----~iLeeLl~~gheVvgVVTq   93 (124)
                      +|||+|+..+.-|.     .+.++|.++||+|.-+...
T Consensus         6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~   43 (364)
T 1f0k_A            6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   43 (364)
T ss_dssp             -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecC
Confidence            38999986542232     4556677789999865543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=81.69  E-value=3.9  Score=30.42  Aligned_cols=35  Identities=17%  Similarity=0.159  Sum_probs=29.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++++-|. +.+|..+.++|+++|++|+.+-.++++
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~   47 (271)
T 3tzq_B           12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETD   47 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            46777887 999999999999999999988777654

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=81.59  E-value=2.6  Score=33.07  Aligned_cols=35  Identities=20%  Similarity=0.091  Sum_probs=29.2

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      .+++||++.|. |.+|..+++.+.+.|+++++.+..
T Consensus         5 ~~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p   40 (288)
T 2nu8_A            5 DKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTP   40 (288)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence            45689999997 999999999998878997776653

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=81.43  E-value=1.3  Score=32.08  Aligned_cols=36  Identities=19%  Similarity=0.224  Sum_probs=30.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..+|++.|. +.+|..+.+.|+++|++|+.+...++
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~   49 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEE   49 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            4467888887 99999999999999999998877654

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=81.41  E-value=1.7  Score=33.36  Aligned_cols=31  Identities=26%  Similarity=0.399  Sum_probs=24.6

Q ss_pred             CceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVT   92 (124)
                      +|||+|+|.|.+|.. .++.|.+. +++|+ |..
T Consensus         2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d   34 (323)
T 1xea_A            2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCT   34 (323)
T ss_dssp             CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EEC
T ss_pred             CcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEe
Confidence            389999999999985 88888764 67888 543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=81.33  E-value=1.5  Score=32.68  Aligned_cols=36  Identities=17%  Similarity=0.175  Sum_probs=29.3

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +..++++-|. +.+|..+.+.|+++|++|+.+-..++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~   55 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVS   55 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            3346777776 99999999999999999988877654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=81.31  E-value=1.5  Score=33.71  Aligned_cols=36  Identities=17%  Similarity=0.099  Sum_probs=31.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++|+++|.|.+|..+.+.|...|++|.++-..++
T Consensus       156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~  191 (300)
T 2rir_A          156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSA  191 (300)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            457999999999999999999888999888766654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=81.31  E-value=3.2  Score=30.80  Aligned_cols=34  Identities=12%  Similarity=0.113  Sum_probs=29.1

Q ss_pred             ceEEEEcC---CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ---SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT---p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|.   +.+|..+.+.|+++|++|+.+...++
T Consensus         7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~   43 (275)
T 2pd4_A            7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES   43 (275)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46888886   59999999999999999998887764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=81.24  E-value=1.9  Score=31.86  Aligned_cols=35  Identities=11%  Similarity=0.061  Sum_probs=29.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .+++++.|. +.+|..+.+.|+++|++|+.+...++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   42 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNRE   42 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            356888887 99999999999999999998877654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=81.19  E-value=1.4  Score=32.41  Aligned_cols=35  Identities=17%  Similarity=0.035  Sum_probs=29.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .+|++.|. +.+|..+.++|+++|++|+.+...+++
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   40 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAA   40 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcch
Confidence            46777776 899999999999999999988776654

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=81.12  E-value=2.4  Score=32.47  Aligned_cols=31  Identities=23%  Similarity=0.232  Sum_probs=24.6

Q ss_pred             CceEEEEcCCHHH-----HHHHHHHHhCCCeEEEEE
Q psy16773         61 DLRVAVIGQSSFA-----AEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        61 ~MKIVFmGTp~FA-----a~iLeeLl~~gheVvgVV   91 (124)
                      +|||+|+..+..|     .++.++|.++||+|.-+.
T Consensus        20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~   55 (415)
T 3rsc_A           20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVT   55 (415)
T ss_dssp             CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEe
Confidence            3899999887665     467788889999987665

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=81.10  E-value=4.1  Score=32.74  Aligned_cols=37  Identities=16%  Similarity=0.194  Sum_probs=31.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ..++|.|+|.|.+|..+.+.|...|++|++.-..+.+
T Consensus       136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~  172 (324)
T 3evt_A          136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHP  172 (324)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcch
Confidence            3478999999999999999998889999998766654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=81.07  E-value=2.4  Score=30.92  Aligned_cols=33  Identities=15%  Similarity=0.167  Sum_probs=27.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++++.|. +.+|..+.++|+++|++|+.+....+
T Consensus         9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~   42 (264)
T 3i4f_A            9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT   42 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCCh
Confidence            4677777 89999999999999999998866543

>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}

Probab=81.01  E-value=2  Score=34.67  Aligned_cols=32  Identities=22%  Similarity=0.394  Sum_probs=27.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC---------CCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN---------GHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~---------gheVvgVVTq   93 (124)
                      |||+++|.|.+|..+++.|.++         +.+|++|...
T Consensus         3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~   43 (327)
T 3do5_A            3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS   43 (327)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred             EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence            8999999999999999988764         5789999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=81.01  E-value=1.3  Score=32.38  Aligned_cols=34  Identities=21%  Similarity=0.177  Sum_probs=28.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc-CCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT-VVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT-qPD   95 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+.. .++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~   40 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQ   40 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence            46777776 99999999999999999988876 443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=81.00  E-value=1.4  Score=32.65  Aligned_cols=34  Identities=18%  Similarity=0.186  Sum_probs=28.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+-..++
T Consensus        31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~   65 (281)
T 3ppi_A           31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAE   65 (281)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChH
Confidence            45777887 99999999999999999988876654

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=81.00  E-value=2.1  Score=34.27  Aligned_cols=40  Identities=18%  Similarity=0.156  Sum_probs=29.9

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCCC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDKA   97 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDKP   97 (124)
                      .+++|||+++|+|.+|..++-.|+.+++  +|+.+=..+++.
T Consensus         6 ~~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~   47 (326)
T 2zqz_A            6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKT   47 (326)
T ss_dssp             CCCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHH
T ss_pred             cCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHh
Confidence            3456999999999999998888776664  677666554443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=80.95  E-value=1.9  Score=31.64  Aligned_cols=35  Identities=20%  Similarity=0.211  Sum_probs=29.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .++++.|. +.+|..+.++|+++|++|+.+..++++
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~   43 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEK   43 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            56788887 999999999999999999988776543

>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*

Probab=80.79  E-value=1.4  Score=41.43  Aligned_cols=38  Identities=16%  Similarity=0.290  Sum_probs=34.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      .||+++|.+++|..+++++.+.|+++++|.+.+|+...
T Consensus         5 kkVLIagrGeia~riiraa~elGi~vVav~s~~d~~s~   42 (1150)
T 3hbl_A            5 KKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSL   42 (1150)
T ss_dssp             CEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCG
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCcccch
Confidence            58999999999999999999999999999999997643

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=80.71  E-value=1.5  Score=30.92  Aligned_cols=29  Identities=28%  Similarity=0.371  Sum_probs=24.8

Q ss_pred             ceEEEEcC----CHHHHHHHHHHHhCCCeEEEE
Q psy16773         62 LRVAVIGQ----SSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        62 MKIVFmGT----p~FAa~iLeeLl~~gheVvgV   90 (124)
                      .+|+++|.    +.+|..+++.|.+.||+|..|
T Consensus        14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~v   46 (145)
T 2duw_A           14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPV   46 (145)
T ss_dssp             CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEE
T ss_pred             CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEe
Confidence            56999999    679999999999989986554

>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*

Probab=80.63  E-value=1.6  Score=35.70  Aligned_cols=31  Identities=19%  Similarity=0.425  Sum_probs=27.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      +||++.|.|.+|..+++.|.++..+|++|--
T Consensus         1 ikVgInG~G~IGr~vlr~l~~~~~evvaind   31 (331)
T 2g82_O            1 MKVGINGFGRIGRQVFRILHSRGVEVALIND   31 (331)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCEEEEEec
Confidence            5899999999999999998876789988754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=80.61  E-value=2  Score=34.73  Aligned_cols=40  Identities=18%  Similarity=0.146  Sum_probs=30.0

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVVDK   96 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqPDK   96 (124)
                      ..+..|||+++|+|.+|..+...|+..++  +|+.+=..+++
T Consensus         5 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k   46 (326)
T 3vku_A            5 TDKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDK   46 (326)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHH
T ss_pred             ccCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHH
Confidence            34456899999999999999988887775  77766555443

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=80.54  E-value=3.2  Score=30.38  Aligned_cols=35  Identities=14%  Similarity=0.213  Sum_probs=28.5

Q ss_pred             CCceEEEEcC-CH--HHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQ-SS--FAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGT-p~--FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +..++++.|. +.  +|..+.++|+++|++|+.+....
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~   43 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE   43 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence            3457888887 55  99999999999999998887654

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=80.41  E-value=2.6  Score=35.87  Aligned_cols=34  Identities=18%  Similarity=0.135  Sum_probs=30.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +||+|+|.|.+|..+-..|.+.||+|+.+-..++
T Consensus        55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e   88 (460)
T 3k6j_A           55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ   88 (460)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence            6899999999999999999999999998876665

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=80.38  E-value=2  Score=32.06  Aligned_cols=35  Identities=31%  Similarity=0.159  Sum_probs=29.6

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..++++-|. +.+|..+.++|+++|++|+.+-..++
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~   46 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPD   46 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            356788887 99999999999999999998876654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=80.30  E-value=2.1  Score=31.08  Aligned_cols=32  Identities=22%  Similarity=0.285  Sum_probs=26.8

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEE
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +..+|++.|. +.+|..+.++|+++|++|+.+.
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~   44 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC   44 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence            4466777777 8999999999999999998876

>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}

Probab=80.26  E-value=3.5  Score=26.93  Aligned_cols=39  Identities=18%  Similarity=0.269  Sum_probs=28.0

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTVVD   95 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~--gheVvgVVTqPD   95 (124)
                      |+++++||+++.....-...|+.++++  |+++++.++..+
T Consensus         1 m~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~   41 (153)
T 3cz5_A            1 MSLSTARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAG   41 (153)
T ss_dssp             ---CCEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHH
T ss_pred             CCCcccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHH
Confidence            455668999999988888888888764  788886666543

>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*

Probab=80.19  E-value=2.1  Score=36.53  Aligned_cols=35  Identities=14%  Similarity=0.286  Sum_probs=29.3

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      .+++||+++|.|.+|...++.+.+. +.+|++|...
T Consensus        21 ~k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~   56 (446)
T 3upl_A           21 GKPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR   56 (446)
T ss_dssp             TCCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS
T ss_pred             CCceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC
Confidence            3569999999999999999887653 6799999864

>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*

Probab=80.14  E-value=1.5  Score=33.39  Aligned_cols=37  Identities=14%  Similarity=0.275  Sum_probs=28.7

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHh-CCCeEEEEEcC-CCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKK-NGHSVVGVFTV-VDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~-~gheVvgVVTq-PDK   96 (124)
                      +.+||+++|.|..|..+++.+.. .|++|+|++-. |++
T Consensus        79 ~~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k  117 (211)
T 2dt5_A           79 RKWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEK  117 (211)
T ss_dssp             SCEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTT
T ss_pred             CCCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHH
Confidence            34799999999999999886332 27899999974 443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	124
d2bw0a2	203	c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehyd	4e-09
d1fmta2	206	c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransf	3e-06
d2blna2	203	c.65.1.1 (A:1-203) Polymyxin resistance protein Ar	1e-05

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 203

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 4e-09
 Identities = 24/45 (53%), Positives = 30/45 (66%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIVDEM 106
           +++AVIGQS F  EVY  L+K GH VVGVFTV DK  + D +   
Sbjct: 1   MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLE 45

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} Length = 206

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

 Score = 42.3 bits (98), Expect = 3e-06
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN 98
          LR+   G   FAA     L  +GH+VVGVFT  D+  
Sbjct: 4  LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPA 40

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 203

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 40.8 bits (94), Expect = 1e-05
 Identities = 6/41 (14%), Positives = 13/41 (31%)

Query: 62  LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDI 102
           ++  V           + L   G+ +  +FT  D    +  
Sbjct: 1   MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAF 41

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	124
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	99.05
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	98.83
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	98.62
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.48
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	97.31
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.1
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.07
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	96.96
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	96.94
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.92
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.75
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.68
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.57
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.42
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.33
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.16
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.12
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.07
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.92
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.9
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	95.83
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.51
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.44
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.42
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.33
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.27
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.24
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	95.21
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.09
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.03
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	94.88
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.87
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.73
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.54
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	94.54
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.5
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.49
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.42
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	94.36
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	94.34
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.33
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.12
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	94.1
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	94.04
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	93.98
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.91
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.88
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	93.71
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	93.42
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	93.37
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	93.36
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.14
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	93.14
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.1
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	93.05
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.97
d1jkxa_	209	Glycinamide ribonucleotide transformylase, GART {E	92.7
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	92.66
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.64
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	92.51
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.48
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	91.99
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	91.96
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.82
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.63
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	91.54
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.31
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.2
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.15
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.14
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	90.87
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	90.86
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.71
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.63
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	90.56
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.48
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	90.41
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.4
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	90.28
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.1
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.97
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	89.77
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	89.66
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.48
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	89.36
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.12
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.07
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	88.75
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	88.6
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	88.56
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	88.52
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	88.38
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	88.2
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.17
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	88.16
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	87.66
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.39
d2py6a1	395	Methyltransferase FkbM {Methylobacillus flagellatu	87.25
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.2
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	87.2
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	87.12
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	86.99
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	86.99
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.93
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	86.92
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.79
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.79
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.71
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	86.1
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	86.01
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	85.99
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	85.89
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	85.85
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	85.84
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	85.7
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	85.26
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	85.24
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.2
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	85.15
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	85.05
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	84.86
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	84.57
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	84.39
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	84.38
d1t71a_	281	Hypothetical protein MPN349 {Mycoplasma pneumoniae	84.36
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	84.18
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.07
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	83.89
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	83.84
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	83.46
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	83.45
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	83.43
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	83.0
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	82.96
d1meoa_	205	Glycinamide ribonucleotide transformylase, GART {H	82.71
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	82.56
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.8
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.76
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	81.67
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	81.55
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	81.5
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	81.29
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	81.05
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	80.99
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.87
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	80.83
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	80.76

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=8.7e-11  Score=87.58  Aligned_cols=51  Identities=55%  Similarity=0.849  Sum_probs=44.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCcc----------eeeehhhhc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDIV----------DEMYSLWRV  112 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~~l----------~~~~~~~r~  112 (124)
                      |||+|+|++.||.++|+.|+++||+|++|+|+||++.+.+++          ++++...+.
T Consensus         1 MkI~~~G~~~~~~~~l~~L~~~~~~i~~V~t~p~~~~~~~~v~~~a~~~~ipv~~~~~~~~   61 (203)
T d2bw0a2           1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRA   61 (203)
T ss_dssp             CEEEEECCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEE
T ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCcEEEEEcCCCcCcCCChhhhhHHhcCCcccccccccc
Confidence            899999999999999999999999999999999999887765          566665543

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=98.83  E-value=2.3e-09  Score=78.64  Aligned_cols=41  Identities=39%  Similarity=0.578  Sum_probs=36.3

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRE  100 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g~  100 (124)
                      .+|||+|+|++.||.++|+.|+++||+|++|+|.||++...
T Consensus         2 ~~mKI~f~G~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~   42 (206)
T d1fmta2           2 ESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGR   42 (206)
T ss_dssp             CCCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCCCBC---
T ss_pred             CCcEEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCccccc
Confidence            56999999999999999999999999999999999987543

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.62  E-value=1.5e-08  Score=75.00  Aligned_cols=37  Identities=16%  Similarity=0.273  Sum_probs=33.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      |||+|+|++++|..+|++|+++||+|++|+|+||++.
T Consensus         1 Mkiv~~~~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~   37 (203)
T d2blna2           1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPG   37 (203)
T ss_dssp             CEEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC---
T ss_pred             CeEEEEecCHHHHHHHHHHHHCCCCEEEEEcCCCCCC
Confidence            8999999999999999999999999999999999874

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.0001  Score=51.68  Aligned_cols=38  Identities=11%  Similarity=0.102  Sum_probs=34.1

Q ss_pred             CceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCCCC
Q psy16773         61 DLRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDKAN   98 (124)
Q Consensus        61 ~MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDKP~   98 (124)
                      ..||+++| ||.+|..++++|+++||+|.++.++|++..
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~   41 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP   41 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcc
Confidence            35899999 599999999999999999999999988753

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=97.31  E-value=0.00015  Score=51.21  Aligned_cols=37  Identities=16%  Similarity=0.161  Sum_probs=32.6

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +++||++.|. |.+|..++++|+++||+|+++..++..
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~   39 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV   39 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcc
Confidence            5689999995 999999999999999999998876653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.10  E-value=0.00019  Score=47.92  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=33.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||+++|.|.+|..+.+.|.++||+|+.|=..|++-
T Consensus         1 M~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~   36 (132)
T d1lssa_           1 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDIC   36 (132)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCcceecCChhhh
Confidence            899999999999999999999999999998888754

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.07  E-value=0.00022  Score=46.35  Aligned_cols=35  Identities=26%  Similarity=0.333  Sum_probs=31.9

Q ss_pred             ceEEEE-cCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVI-GQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFm-GTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||+++ |+|.+|..+-+.|.++||+|+..-++|++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            899999 78999999999999999999988887764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=96.96  E-value=0.00044  Score=47.90  Aligned_cols=37  Identities=19%  Similarity=0.190  Sum_probs=33.4

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ++||++.|. |.+|..++++|+++||+|+++...++..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~   40 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTAS   40 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccc
Confidence            578999997 9999999999999999999999887654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.94  E-value=0.00079  Score=49.89  Aligned_cols=37  Identities=22%  Similarity=0.355  Sum_probs=32.3

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++.|||++.|. |-+|..+++.|+++||+|+++-+...
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~   50 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN   50 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCc
Confidence            36799999997 99999999999999999999866544

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.00073  Score=44.87  Aligned_cols=36  Identities=25%  Similarity=0.392  Sum_probs=32.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||+++|.|.+|..+-..|.+.||+|..+...+.+.
T Consensus         1 MkI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            899999999999999999999999999998776544

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.75  E-value=0.00068  Score=46.13  Aligned_cols=35  Identities=29%  Similarity=0.326  Sum_probs=30.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||.|+|.|..|..+.+.|+++||+|.+....+++
T Consensus         1 MkIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~   35 (152)
T d1i36a2           1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSP   35 (152)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCH
T ss_pred             CEEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhH
Confidence            89999999999999999999999999776655543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.68  E-value=0.0011  Score=45.04  Aligned_cols=32  Identities=25%  Similarity=0.504  Sum_probs=28.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |||.|+|.|.+|..+.+.|.++||+|.+.=.+
T Consensus         1 MkI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~   32 (165)
T d2f1ka2           1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ   32 (165)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCEEEEEECC
Confidence            89999999999999999999999999876443

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.57  E-value=0.0021  Score=44.74  Aligned_cols=43  Identities=26%  Similarity=0.478  Sum_probs=35.0

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCc
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTVVDKANREDI  102 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTqPDKP~g~~~  102 (124)
                      ++|||+++|+|.+|..+++.|.+. +.|+++|+...+.......
T Consensus         2 ~kirvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~~~   45 (170)
T d1f06a1           2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKTP   45 (170)
T ss_dssp             CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSSC
T ss_pred             CcceEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccccccc
Confidence            579999999999999999988764 6899999987765544333

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.42  E-value=0.0026  Score=46.94  Aligned_cols=38  Identities=18%  Similarity=0.247  Sum_probs=34.2

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ++.+|++.|. |.+|..+.++|+++||+|.++++.++++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchh
Confidence            4578999996 9999999999999999999999988765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.33  E-value=0.0019  Score=44.47  Aligned_cols=32  Identities=19%  Similarity=0.269  Sum_probs=28.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      +|||.|+|.|.+|.+..+.|+++||+|.+-=.
T Consensus         1 ~MkIGvIGlG~MG~~ma~~L~~~G~~V~~~dr   32 (178)
T d1pgja2           1 SMDVGVVGLGVMGANLALNIAEKGFKVAVFNR   32 (178)
T ss_dssp             CBSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             CCEEEEEeehHHHHHHHHHHHHCCCeEEEEEC
Confidence            38999999999999999999999999976533

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.16  E-value=0.0021  Score=44.94  Aligned_cols=33  Identities=18%  Similarity=0.273  Sum_probs=29.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||.+.|. |.+|..+.++|.++||+|+++-.+.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            89999997 9999999999999999999985543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.12  E-value=0.0014  Score=44.65  Aligned_cols=34  Identities=24%  Similarity=0.202  Sum_probs=28.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC-CeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG-HSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g-heVvgVVTqPD   95 (124)
                      |||.|+|.|..|..+++.|+++| |+|...-..++
T Consensus         1 MkI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred             CEEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChh
Confidence            89999999999999999999876 88865544443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.07  E-value=0.0016  Score=44.71  Aligned_cols=29  Identities=24%  Similarity=0.476  Sum_probs=26.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgV   90 (124)
                      |||.|+|+|..|..+++.|++.||+|...
T Consensus         1 MkIg~IG~G~mG~al~~~l~~~~~~i~v~   29 (152)
T d2ahra2           1 MKIGIIGVGKMASAIIKGLKQTPHELIIS   29 (152)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTSSCEEEEE
T ss_pred             CEEEEEeccHHHHHHHHHHHhCCCeEEEE
Confidence            89999999999999999999999999643

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=95.92  E-value=0.0045  Score=45.61  Aligned_cols=30  Identities=30%  Similarity=0.394  Sum_probs=28.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEE
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVV   91 (124)
                      |||++.|. |-+|..+.++|+++||+|+++.
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d   31 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILD   31 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEE
Confidence            89999998 9999999999999999999985

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.90  E-value=0.0021  Score=44.11  Aligned_cols=34  Identities=26%  Similarity=0.242  Sum_probs=29.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||.|+|.|..|.++.+.|+++||+|.+.=..++
T Consensus         1 MkIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~   34 (161)
T d1vpda2           1 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE   34 (161)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcc
Confidence            8999999999999999999999999986544443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.83  E-value=0.0045  Score=43.93  Aligned_cols=35  Identities=29%  Similarity=0.435  Sum_probs=31.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      |||.++|.|-+|.+....|.+.||+|+|+=.++++
T Consensus         1 MkI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            89999999999999998888999999998776544

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.51  E-value=0.016  Score=42.01  Aligned_cols=37  Identities=22%  Similarity=0.145  Sum_probs=32.9

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .+||.+.|. |-+|..+.++|+++||+|.++.+.+++.
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~   45 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV   45 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc
Confidence            379999996 9999999999999999999999877653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.44  E-value=0.0059  Score=42.78  Aligned_cols=34  Identities=24%  Similarity=0.265  Sum_probs=29.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+++|+|.+|..+-..|.++||+|....+..|
T Consensus         1 MkI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            8999999999999999999988999987765444

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0089  Score=42.26  Aligned_cols=39  Identities=13%  Similarity=0.067  Sum_probs=33.0

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCC--CeEEEEEcCCCCCC
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNG--HSVVGVFTVVDKAN   98 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~g--heVvgVVTqPDKP~   98 (124)
                      +++||++.|. |.+|..++++|+++|  ++|.++.++|.+..
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~   54 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD   54 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc
Confidence            4468999998 999999999999988  48999998876543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.33  E-value=0.0063  Score=40.74  Aligned_cols=34  Identities=21%  Similarity=0.119  Sum_probs=30.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +||+++|.|.+|..+-..|.++||+|..+-+.+.
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~   35 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQ   35 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            6899999999999999999999999998876554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.27  E-value=0.013  Score=39.10  Aligned_cols=36  Identities=8%  Similarity=0.059  Sum_probs=30.9

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ...||+|+| .|.+|....+.|.++||+|.+.-..++
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            336999999 899999999999999999988765554

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.24  E-value=0.011  Score=41.04  Aligned_cols=35  Identities=20%  Similarity=0.178  Sum_probs=29.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |||+++|.|-.|.++. .++++||+|+|+=.++.+.
T Consensus         1 MkI~ViGlG~vGl~~a-~~~a~g~~V~g~Din~~~v   35 (196)
T d1dlja2           1 MKIAVAGSGYVGLSLG-VLLSLQNEVTIVDILPSKV   35 (196)
T ss_dssp             CEEEEECCSHHHHHHH-HHHTTTSEEEEECSCHHHH
T ss_pred             CEEEEECCChhHHHHH-HHHHCCCcEEEEECCHHHH
Confidence            8999999999999865 4556799999998777653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.21  E-value=0.0063  Score=39.87  Aligned_cols=36  Identities=17%  Similarity=0.250  Sum_probs=30.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      -||+++|+|.+|..+.+.|.++||+|+-+=...++.
T Consensus         3 K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a   38 (182)
T d1e5qa1           3 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESA   38 (182)
T ss_dssp             CEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHH
Confidence            579999999999999999999999997766666544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.09  E-value=0.0061  Score=39.78  Aligned_cols=35  Identities=34%  Similarity=0.487  Sum_probs=31.8

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      |++++|.|.+|..+.+.|.++||+|+.|-.+|++-
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~   36 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKV   36 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHH
Confidence            47889999999999999999999999998888764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.03  E-value=0.022  Score=40.92  Aligned_cols=33  Identities=15%  Similarity=0.165  Sum_probs=29.2

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ++++.|. |-+|..+.++|+++||+|+|+...++
T Consensus         3 ~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~   36 (339)
T d1n7ha_           3 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS   36 (339)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             EEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCc
Confidence            4666677 99999999999999999999998766

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.02  Score=41.40  Aligned_cols=33  Identities=18%  Similarity=0.249  Sum_probs=29.4

Q ss_pred             eE-EEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RV-AVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KI-VFmGT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      || .+.|. |-+|..+.++|+++||+|+|+...++
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~   36 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS   36 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCc
Confidence            68 57787 99999999999999999999998765

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.87  E-value=0.016  Score=43.13  Aligned_cols=29  Identities=31%  Similarity=0.180  Sum_probs=27.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEE
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgV   90 (124)
                      |||.+.|. |-+|..+.++|+++||+|+++
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~i   31 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIV   31 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence            89999998 999999999999999999998

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.73  E-value=0.02  Score=40.60  Aligned_cols=29  Identities=7%  Similarity=0.172  Sum_probs=26.6

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEE
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVV   91 (124)
                      ||.+.|. |-+|..+.++|+++||+|+++-
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id   31 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFD   31 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            7888888 9999999999999999999974

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.024  Score=41.47  Aligned_cols=31  Identities=23%  Similarity=0.284  Sum_probs=28.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      .||++.|. |-+|..+.++|+++||+|+++..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            57999998 99999999999999999999864

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.54  E-value=0.032  Score=39.79  Aligned_cols=34  Identities=26%  Similarity=0.242  Sum_probs=29.9

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      ||.+.|. |-+|..+.+.|+++||+|.++.+..+.
T Consensus         2 ~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~   36 (321)
T d1rpna_           2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSS   36 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCc
Confidence            5788888 999999999999999999999887653

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.50  E-value=0.038  Score=36.96  Aligned_cols=36  Identities=22%  Similarity=0.354  Sum_probs=29.6

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |++...||+++|.|-.|..+--+|.++|++|+ |+-+
T Consensus         2 ~~~~~~kVvVIGaGiaGl~~A~~L~~~G~~V~-vier   37 (268)
T d1c0pa1           2 MMHSQKRVVVLGSGVIGLSSALILARKGYSVH-ILAR   37 (268)
T ss_dssp             CCCCSCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred             CCCCCCcEEEECccHHHHHHHHHHHHCCCCEE-EEeC
Confidence            44555799999999999999889999999976 5544

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.49  E-value=0.021  Score=39.16  Aligned_cols=33  Identities=21%  Similarity=0.426  Sum_probs=28.4

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      +|||+++|.|.+|...++.|... +.+|+||...
T Consensus         1 kiki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~   34 (184)
T d1ydwa1           1 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR   34 (184)
T ss_dssp             CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeC
Confidence            48999999999999999888764 6899998764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.42  E-value=0.021  Score=38.94  Aligned_cols=30  Identities=23%  Similarity=0.154  Sum_probs=27.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +||.|+|.|..|..+.+.|+++||+|.+-=
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d   31 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFD   31 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCCeEEEEE
Confidence            689999999999999999999999987643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=94.36  E-value=0.02  Score=41.98  Aligned_cols=31  Identities=13%  Similarity=0.097  Sum_probs=27.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |||++.|. |-+|..++++|+++||+|..+..
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~   34 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEE
Confidence            89999996 99999999999999998766554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=94.34  E-value=0.031  Score=40.54  Aligned_cols=32  Identities=22%  Similarity=0.344  Sum_probs=28.0

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCC-eEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGH-SVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gh-eVvgVVTq   93 (124)
                      |||++.|. |-+|..+.++|+++|| +|.++-..
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~   34 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG   34 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            89999998 9999999999999885 89888553

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.33  E-value=0.033  Score=38.42  Aligned_cols=35  Identities=20%  Similarity=0.186  Sum_probs=27.2

Q ss_pred             CCCceEEEEcCCHHHHH-HHHHHHhC--CCeEEEEEcC
Q psy16773         59 KCDLRVAVIGQSSFAAE-VYKLLKKN--GHSVVGVFTV   93 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~-iLeeLl~~--gheVvgVVTq   93 (124)
                      |+++||+++|+|.+|.. .+..+.+.  ..+|+||...
T Consensus         1 MkkirigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~   38 (181)
T d1zh8a1           1 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR   38 (181)
T ss_dssp             CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS
T ss_pred             CCCcEEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEec
Confidence            36799999999999986 57776653  3689998754

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.12  E-value=0.026  Score=39.58  Aligned_cols=33  Identities=15%  Similarity=0.242  Sum_probs=26.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHh-C-CCeEEEEEc
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKK-N-GHSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~-~-gheVvgVVT   92 (124)
                      +++||+++|+|.+|...+..+++ . ..|+++|..
T Consensus         3 kkirvaIIGaG~ig~~~~~~~l~~~~~~el~avas   37 (157)
T d1nvmb1           3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVG   37 (157)
T ss_dssp             SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEEC
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEe
Confidence            56999999999999987655554 3 468999986

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=94.10  E-value=0.032  Score=41.83  Aligned_cols=32  Identities=16%  Similarity=0.255  Sum_probs=27.9

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |||++.|. |-+|..+.++|+++||+++..+-.
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            89999998 999999999999999987666543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.073  Score=34.66  Aligned_cols=40  Identities=20%  Similarity=0.256  Sum_probs=33.1

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      +++-||+++|+|--|..+-.+|.++|++|+ |+=.-|++.|
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~V~-VlEa~~r~GG   42 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVT-LLEARDRVGG   42 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTCEEE-EECSSSSSBT
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCCCEE-EEeCCCCCcc
Confidence            355789999999999999999999999964 7767777755

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=93.98  E-value=0.027  Score=39.62  Aligned_cols=33  Identities=18%  Similarity=0.080  Sum_probs=23.7

Q ss_pred             ceEEEEcCCH-----HHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSS-----FAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~-----FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+|++.|.     -...+-++|.++||+|+- +|.|+
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~-~~~~~   38 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRM-CAPPD   38 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEE-EECGG
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEE-EeCcc
Confidence            8999987664     344566888899999874 45544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.91  E-value=0.029  Score=37.50  Aligned_cols=34  Identities=21%  Similarity=0.295  Sum_probs=31.3

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      .|+++|.+.+|..++++|.++|++|+.|...||+
T Consensus         5 HiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~   38 (153)
T d1id1a_           5 HFIVCGHSILAINTILQLNQRGQNVTVISNLPED   38 (153)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHH
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEeccchh
Confidence            5999999999999999999999999999888864

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.88  E-value=0.035  Score=36.50  Aligned_cols=37  Identities=22%  Similarity=0.323  Sum_probs=30.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      |||+++|+|.-|..+-..|.++||+|+ |+=.-|++.|
T Consensus         1 m~V~IIGaG~aGL~aA~~L~~~G~~V~-vlE~~~~~GG   37 (347)
T d2ivda1           1 MNVAVVGGGISGLAVAHHLRSRGTDAV-LLESSARLGG   37 (347)
T ss_dssp             CCEEEECCBHHHHHHHHHHHTTTCCEE-EECSSSSSBT
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCCCEE-EEecCCCCCc
Confidence            789999999999999889999999975 6655555544

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=93.71  E-value=0.038  Score=37.27  Aligned_cols=33  Identities=21%  Similarity=0.426  Sum_probs=26.4

Q ss_pred             CceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEcC
Q psy16773         61 DLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVTq   93 (124)
                      +|||+++|+|.+|.. .+..|... +.+|+||+..
T Consensus         1 Kiri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~   35 (164)
T d1tlta1           1 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP   35 (164)
T ss_dssp             CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEec
Confidence            589999999999986 56666553 6899999854

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.42  E-value=0.055  Score=39.34  Aligned_cols=33  Identities=18%  Similarity=0.145  Sum_probs=28.4

Q ss_pred             CCceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         60 CDLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        60 k~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      ++.+|.+.|. |-+|..+.++|+++||+|.++..
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            3356777788 99999999999999999999864

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=93.37  E-value=0.013  Score=42.60  Aligned_cols=29  Identities=17%  Similarity=0.195  Sum_probs=25.7

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEE
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgV   90 (124)
                      |||++.|. |-+|..+.+.|+++||+|.++
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~   30 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPA   30 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCC
Confidence            89999998 999999999999999876553

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=93.36  E-value=0.053  Score=37.60  Aligned_cols=41  Identities=20%  Similarity=0.088  Sum_probs=30.7

Q ss_pred             CCCCCceEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         57 IHKCDLRVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        57 M~~k~MKIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      |.++++||+++|+|.+|..+.-.|..+++ |++.+-..+++.
T Consensus         3 ~~~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           3 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cccCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            67788999999999999876555555564 887765666654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.14  E-value=0.061  Score=39.07  Aligned_cols=31  Identities=19%  Similarity=0.094  Sum_probs=28.2

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      -||++.|. |-+|..+.++|+++||+|+++..
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            37999998 99999999999999999999964

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=93.14  E-value=0.035  Score=40.81  Aligned_cols=33  Identities=27%  Similarity=0.244  Sum_probs=29.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      -+|++.|. |-+|..++++|+++||+|.|.+..+
T Consensus        12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~   45 (342)
T d1y1pa1          12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA   45 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCc
Confidence            68999998 8899999999999999999988654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.10  E-value=0.025  Score=40.24  Aligned_cols=34  Identities=18%  Similarity=0.227  Sum_probs=28.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      .||+++|+|.+|..+-..|.++||+|......++
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~   41 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEE   41 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHH
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHH
Confidence            4799999999999988888888999987765543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=93.05  E-value=0.048  Score=38.88  Aligned_cols=31  Identities=16%  Similarity=0.282  Sum_probs=27.0

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCCeEEEEE
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +.||++.|. |.+|..++++|+++||+++.+.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~   33 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLR   33 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEec
Confidence            358999998 9999999999999999887543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.97  E-value=0.064  Score=39.73  Aligned_cols=29  Identities=34%  Similarity=0.449  Sum_probs=26.5

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHh-CCCeEEEE
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKK-NGHSVVGV   90 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~-~gheVvgV   90 (124)
                      |||++.|. |-+|..+.++|++ .||+|+++
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~   33 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIV   33 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEE
Confidence            89999998 9999999999996 68999987

>d1jkxa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Glycinamide ribonucleotide transformylase, GART
species: Escherichia coli [TaxId: 562]

Probab=92.70  E-value=0.093  Score=37.90  Aligned_cols=34  Identities=24%  Similarity=0.291  Sum_probs=21.9

Q ss_pred             ceEEEEc--CCHHHHHHHHHHHhC--CCeEEEEEcC-CC
Q psy16773         62 LRVAVIG--QSSFAAEVYKLLKKN--GHSVVGVFTV-VD   95 (124)
Q Consensus        62 MKIVFmG--Tp~FAa~iLeeLl~~--gheVvgVVTq-PD   95 (124)
                      |||++|+  .|.--..+|+++...  +++|++|+|+ ||
T Consensus         1 MkIaVl~SG~GSnL~aLl~a~~~~~l~~~I~~Visn~~~   39 (209)
T d1jkxa_           1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKAD   39 (209)
T ss_dssp             CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTT
T ss_pred             CEEEEEEecCcHHHHHHHHHHHcCCCCCEEEEEEeCCCC
Confidence            8998884  454333445544432  5899999995 44

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.66  E-value=0.039  Score=36.15  Aligned_cols=36  Identities=25%  Similarity=0.295  Sum_probs=29.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCe--EEEEEcCCCCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHS--VVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~ghe--VvgVVTqPDKP   97 (124)
                      .+|++.|. |.+|..+++.|+++||+  |+++..+|++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~   42 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK   42 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH
Confidence            57999995 99999999999999875  66666666543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.64  E-value=0.17  Score=33.52  Aligned_cols=42  Identities=21%  Similarity=0.256  Sum_probs=35.4

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      .....||.++|.|..|.-..++..+-|++++..-..+|.|+.
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~   49 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAM   49 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGGG
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCchh
Confidence            344579999999999999999988889999888778887753

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.51  E-value=0.073  Score=36.26  Aligned_cols=33  Identities=12%  Similarity=0.106  Sum_probs=27.1

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCC--eEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGH--SVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gh--eVvgVVTqP   94 (124)
                      .||++.|. |.+|..++++|+++||  +|..+...+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            58999998 9999999999999987  566555444

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.48  E-value=0.082  Score=38.59  Aligned_cols=28  Identities=25%  Similarity=0.169  Sum_probs=25.2

Q ss_pred             EEEEcC-CHHHHHHHHHHHhCCCeEEEEE
Q psy16773         64 VAVIGQ-SSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        64 IVFmGT-p~FAa~iLeeLl~~gheVvgVV   91 (124)
                      |++.|. |-+|..++++|+++||+|+++.
T Consensus         4 ILVTGatGfIG~~lv~~Ll~~g~~V~~~d   32 (347)
T d1z45a2           4 VLVTGGAGYIGSHTVVELIENGYDCVVAD   32 (347)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEeCCCcHHHHHHHHHHHHCcCeEEEEE
Confidence            667777 9999999999999999999985

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=91.99  E-value=0.045  Score=37.84  Aligned_cols=31  Identities=13%  Similarity=0.251  Sum_probs=24.8

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |||++.|. |-+|..+.++|.++||.| ++...
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~   32 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVH   32 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECC
Confidence            89999997 999999999998887644 44433

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=91.96  E-value=0.062  Score=36.85  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=29.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      -+|.|+|-|..|.+..+.|+++||+|.+.=..|+
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~   36 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS   36 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence            5799999999999999999999999986644443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.82  E-value=0.14  Score=34.74  Aligned_cols=32  Identities=22%  Similarity=0.497  Sum_probs=27.3

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~gheVvgVVTq   93 (124)
                      |||++.|. |..|..+.+.+.+++|++++.+..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~   33 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDV   33 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECC
Confidence            89999995 999998877777789999988753

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.63  E-value=0.072  Score=37.48  Aligned_cols=38  Identities=13%  Similarity=0.223  Sum_probs=32.4

Q ss_pred             CCceEEEEc-CCHHHHHHHHHHHhC-CCeEEEEEcCCCCC
Q psy16773         60 CDLRVAVIG-QSSFAAEVYKLLKKN-GHSVVGVFTVVDKA   97 (124)
Q Consensus        60 k~MKIVFmG-Tp~FAa~iLeeLl~~-gheVvgVVTqPDKP   97 (124)
                      .+|||++.| +|..|..+++.+.++ +.+++|.+..++.+
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~   42 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSS   42 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccch
Confidence            469999999 599999999988875 68999999877654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=91.54  E-value=0.1  Score=38.68  Aligned_cols=33  Identities=21%  Similarity=0.306  Sum_probs=26.3

Q ss_pred             eEE-EEc-CCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVA-VIG-QSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIV-FmG-Tp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ||| +.| ||-+|..+.++|+++||+|+++...+.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~   36 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRAS   36 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCc
Confidence            455 668 599999999999999999999987553

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.31  E-value=0.094  Score=35.23  Aligned_cols=26  Identities=23%  Similarity=0.282  Sum_probs=23.6

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEE
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVV   88 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVv   88 (124)
                      ||.|+|.|..|.+..+.|++.||.++
T Consensus         2 kIg~IGlG~MG~~ma~~L~~~g~~~~   27 (156)
T d2cvza2           2 KVAFIGLGAMGYPMAGHLARRFPTLV   27 (156)
T ss_dssp             CEEEECCSTTHHHHHHHHHTTSCEEE
T ss_pred             eEEEEeHHHHHHHHHHHHHhCCCEEE
Confidence            69999999999999999999888764

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.20  E-value=0.13  Score=36.50  Aligned_cols=32  Identities=19%  Similarity=0.345  Sum_probs=28.2

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      +|||++-|.|.+|..++++|.++ ..||++|--
T Consensus         2 ~irIaINGfGRIGR~v~Ral~~~~dieiVaINd   34 (172)
T d2czca2           2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITK   34 (172)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred             cEEEEEECCCHHHHHHHHHHHhCCCceEEEEec
Confidence            48999999999999999999875 479999874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.15  E-value=0.26  Score=32.27  Aligned_cols=35  Identities=20%  Similarity=0.185  Sum_probs=30.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..||+++|.|.+|.++.++|.++|++|.-|-..+.
T Consensus        30 ~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECcchhHHHHHHHhhcccceEEEEeeccc
Confidence            46899999999999999999999999988776653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.14  E-value=0.31  Score=31.02  Aligned_cols=35  Identities=17%  Similarity=0.100  Sum_probs=30.1

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +-||+++|.|.+|.++-+.|.+.|++|.-|-..+.
T Consensus        22 p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence            35899999999999999999999999887765553

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=90.87  E-value=0.15  Score=35.11  Aligned_cols=37  Identities=19%  Similarity=0.272  Sum_probs=29.7

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDK   96 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDK   96 (124)
                      ++|||+++|+|.+|..+-..|+.++  .||+.+=..+++
T Consensus         4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~   42 (146)
T d1ez4a1           4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDR   42 (146)
T ss_dssp             TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccch
Confidence            4589999999999999888888766  588888655544

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=90.86  E-value=0.095  Score=35.01  Aligned_cols=35  Identities=11%  Similarity=0.238  Sum_probs=28.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHh-CCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKK-NGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~-~gheVvgVVTqPD   95 (124)
                      +.||++.|+|..|..+++++.. .+|+|+|++-.-+
T Consensus         3 ~~~v~I~GaG~~G~~l~~~l~~~~~~~iv~fiDdd~   38 (126)
T d2dt5a2           3 KWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDP   38 (126)
T ss_dssp             CEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCT
T ss_pred             CceEEEEcCCHHHHHHHHhHhhcCCcEEEEEEeCch
Confidence            4789999999999999987753 4799999998443

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.71  E-value=0.16  Score=34.16  Aligned_cols=39  Identities=18%  Similarity=0.291  Sum_probs=30.7

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      ++.||+++|+|.-|..+--.|.++||+|+ |+=.-|++.|
T Consensus        29 ~pkkV~IIGaG~aGLsaA~~L~~~G~~V~-vlE~~~~~GG   67 (370)
T d2iida1          29 NPKHVVIVGAGMAGLSAAYVLAGAGHQVT-VLEASERPGG   67 (370)
T ss_dssp             SCCEEEEECCBHHHHHHHHHHHHHTCEEE-EECSSSSSBT
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCEE-EEeCCCCCCC
Confidence            44699999999999999888998999976 5555555543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.63  E-value=0.29  Score=31.93  Aligned_cols=35  Identities=20%  Similarity=0.195  Sum_probs=30.7

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +-|++++|.|.+|.++-..|.+.|++|.-|-..+.
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCcceeEEEeccc
Confidence            45899999999999999999999999988877654

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=90.56  E-value=0.11  Score=37.37  Aligned_cols=36  Identities=17%  Similarity=0.369  Sum_probs=27.2

Q ss_pred             CCCCCceEEEEcCCH----HHHHHHHHHHh--CCCeEEEEEc
Q psy16773         57 IHKCDLRVAVIGQSS----FAAEVYKLLKK--NGHSVVGVFT   92 (124)
Q Consensus        57 M~~k~MKIVFmGTp~----FAa~iLeeLl~--~gheVvgVVT   92 (124)
                      ++.++|||+++|.|.    ++...+.++.+  .+++|+||..
T Consensus        12 ~~~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d   53 (237)
T d2nvwa1          12 PSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYN   53 (237)
T ss_dssp             GGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEEC
T ss_pred             CCCCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEc
Confidence            445679999999875    56677777765  3579999874

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.48  E-value=0.22  Score=32.67  Aligned_cols=36  Identities=17%  Similarity=0.311  Sum_probs=28.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .||+++|.|..|..+-..|.++|++-+-|+-+-|+.
T Consensus         5 ~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           5 AKIALLGAGPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            689999999999999999999998533455554544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=90.41  E-value=0.2  Score=33.26  Aligned_cols=32  Identities=19%  Similarity=0.298  Sum_probs=26.7

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCC--eEEEEEcCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGH--SVVGVFTVV   94 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gh--eVvgVVTqP   94 (124)
                      ||.|+|.|.+|..+.+.|.++|+  +|.|+-.++
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP   36 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence            69999999999999999998885  677765444

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.40  E-value=0.25  Score=34.32  Aligned_cols=34  Identities=29%  Similarity=0.478  Sum_probs=27.8

Q ss_pred             ceEEEE-cC-CHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVI-GQ-SSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFm-GT-p~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      |||+++ |. +.+|..+-++|.++|++|+.+-.+..
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            677554 65 88999999999999999998876543

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=90.28  E-value=0.13  Score=36.15  Aligned_cols=30  Identities=20%  Similarity=0.218  Sum_probs=21.1

Q ss_pred             ceEEEEcCCHH-----HHHHHHHHHhCCCeEEEEE
Q psy16773         62 LRVAVIGQSSF-----AAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGTp~F-----Aa~iLeeLl~~gheVvgVV   91 (124)
                      |||+|.+.|.-     ...+-++|.++||+|+-+.
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~   35 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCL   35 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEE
Confidence            89999665543     2345677888999997554

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.10  E-value=0.21  Score=37.08  Aligned_cols=38  Identities=18%  Similarity=0.316  Sum_probs=32.3

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      +.||+++|+|-.|..+-..|.++||+|+ |+=.-|+..|
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~-viEk~~~iGG   39 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGHQVH-IIDQRDHIGG   39 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCEEE-EEESSSSSSG
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCCCEE-EEECCCCCcC
Confidence            4789999999999999999988899985 7777777765

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.97  E-value=0.47  Score=30.62  Aligned_cols=35  Identities=17%  Similarity=0.179  Sum_probs=30.6

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      -+-||+++|.|.+|.+.-+.|.+.|.+|.-+...+
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence            34689999999999999999999999998888654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.77  E-value=0.27  Score=31.83  Aligned_cols=33  Identities=18%  Similarity=0.109  Sum_probs=28.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      .||+++|.|..|.++.++|.+.|++|.-|-..|
T Consensus        33 ~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence            479999999999999999999999998665443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=89.66  E-value=0.27  Score=31.68  Aligned_cols=37  Identities=38%  Similarity=0.368  Sum_probs=28.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      .||+++|+|.-|..+-.+|.++|++|+ |+=.-|++.|
T Consensus         2 KkV~IIGaG~aGL~aA~~La~~G~~V~-vlE~~~~~GG   38 (373)
T d1seza1           2 KRVAVIGAGVSGLAAAYKLKIHGLNVT-VFEAEGKAGG   38 (373)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTSCEEE-EECSSSSSCS
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCCEE-EEeCCCCCcC
Confidence            479999999999999889999999965 4444444433

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.48  E-value=0.46  Score=30.82  Aligned_cols=33  Identities=24%  Similarity=0.249  Sum_probs=28.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      -||+++|.|..|.++.+.|.+.|++|.-|-..+
T Consensus        31 k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          31 NNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence            589999999999999999999999987765544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.36  E-value=0.41  Score=30.49  Aligned_cols=35  Identities=17%  Similarity=0.162  Sum_probs=29.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ..||+++|.|++|..-++.|++.|.+|+-+-..+.
T Consensus        12 ~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1          12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            46899999999999999999999988877765544

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.12  E-value=0.27  Score=33.11  Aligned_cols=30  Identities=20%  Similarity=0.102  Sum_probs=24.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC--CCeEEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN--GHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~--gheVvgVV   91 (124)
                      |||+++|.|..|.++..+|.+.  +.+|+-+-
T Consensus         1 ~KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~   32 (198)
T d1nhpa1           1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYE   32 (198)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             CEEEEECCcHHHHHHHHHHHhcCCCCeEEEEe
Confidence            8999999999999999998764  45776554

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=89.07  E-value=0.22  Score=35.47  Aligned_cols=32  Identities=28%  Similarity=0.353  Sum_probs=28.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhC-CCeEEEEEcC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~-gheVvgVVTq   93 (124)
                      .||++-|.|.+|..+++.|.++ +.||++|--.
T Consensus         2 IKVaINGfGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            6999999999999999999986 4799999643

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.75  E-value=0.072  Score=35.67  Aligned_cols=26  Identities=31%  Similarity=0.404  Sum_probs=23.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSV   87 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheV   87 (124)
                      |||+++|.|-+|..+--+|.++|++|
T Consensus         1 mkV~VIGaGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGAGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECchHHHHHHHHHHHHCCCCc
Confidence            89999999999998888898888764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.60  E-value=0.53  Score=30.16  Aligned_cols=33  Identities=21%  Similarity=0.149  Sum_probs=28.9

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      -||+++|.|.+|.++-..|.+.|++|.-|-..+
T Consensus        22 ~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence            579999999999999999999999987776554

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=88.56  E-value=0.3  Score=34.56  Aligned_cols=54  Identities=13%  Similarity=0.020  Sum_probs=37.8

Q ss_pred             cccCceeEEecCCCCccCCCCCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         40 CHPTGIVFRRSGSKSSQIHKCDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        40 c~~~~~~~~~~~s~~~~M~~k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |..-+.+..+.. .+..-..++.||+++|+|.-|..+-..|.++||+|+-+=..+
T Consensus        23 C~~Np~~g~e~~-~~~~~~~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          23 CLVNPRACHETK-MPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCTTTTCTTT-SCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             EeeCccccCccc-cccCCCCCCcEEEEECccHHHHHHHHHHHhhccceEEEeccC
Confidence            666555554443 222233456799999999999999999989999997654433

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=88.52  E-value=0.31  Score=34.65  Aligned_cols=34  Identities=9%  Similarity=0.154  Sum_probs=26.4

Q ss_pred             CCceEEEEcCCHHHHH-HHHHHHhC-CCeEEEEEcC
Q psy16773         60 CDLRVAVIGQSSFAAE-VYKLLKKN-GHSVVGVFTV   93 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~-iLeeLl~~-gheVvgVVTq   93 (124)
                      ++.||+++|.|.+|.. +++.+... +.+|+||+..
T Consensus        32 ~~iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~   67 (221)
T d1h6da1          32 RRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG   67 (221)
T ss_dssp             CCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS
T ss_pred             CCEEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecC
Confidence            5689999999999985 55655443 6799999863

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=88.38  E-value=0.73  Score=28.95  Aligned_cols=41  Identities=22%  Similarity=0.169  Sum_probs=32.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANRED  101 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~  101 (124)
                      ..+|+++|.|.+|.+.-..|...|.+|.-|...+.-....|
T Consensus        22 ~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~~~l~~~d   62 (121)
T d1mo9a2          22 GSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKD   62 (121)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcchhheEeeccchhhcccc
Confidence            36899999999999999999888989988887765333333

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=88.20  E-value=0.18  Score=35.44  Aligned_cols=32  Identities=13%  Similarity=0.105  Sum_probs=26.0

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      +.||+++|++.+|..+++.+.+.++++.+.+-
T Consensus         2 ~kkl~i~Gagg~~~~v~di~~~~~~~~~~f~d   33 (193)
T d3bswa1           2 TEKIYIYGASGHGLVCEDVAKNMGYKECIFLD   33 (193)
T ss_dssp             CSEEEEEC--CHHHHHHHHHHHHTCCEEEECC
T ss_pred             CCEEEEEcCCHhHHHHHHHHHhCCCcEEEEEc
Confidence            46899999999999999988777899988764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.17  E-value=0.56  Score=30.27  Aligned_cols=34  Identities=18%  Similarity=0.056  Sum_probs=27.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ..||+++|.|..|.++..+|.+.|+++.-+...+
T Consensus         3 ~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEECCcHHHHHHHHHHHHcCCceEEEEecC
Confidence            4689999999999999999998888765444443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=88.16  E-value=0.34  Score=32.45  Aligned_cols=36  Identities=19%  Similarity=0.213  Sum_probs=28.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDKP   97 (124)
                      |||+++|.|.+|..+...|..++  .|++.+=..+++.
T Consensus         1 mKI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~   38 (142)
T d1guza1           1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIP   38 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccc
Confidence            89999999999999888887776  5887775555544

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=87.66  E-value=0.28  Score=34.50  Aligned_cols=30  Identities=17%  Similarity=0.025  Sum_probs=20.7

Q ss_pred             ceEEEEcCCHH-----HHHHHHHHHhCCCeEEEEE
Q psy16773         62 LRVAVIGQSSF-----AAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        62 MKIVFmGTp~F-----Aa~iLeeLl~~gheVvgVV   91 (124)
                      |||+|+..|.-     ...+.++|.++||+|+-+.
T Consensus         1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t   35 (401)
T d1rrva_           1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCA   35 (401)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEE
Confidence            78998754432     2345578889999987654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.39  E-value=0.37  Score=30.70  Aligned_cols=33  Identities=21%  Similarity=0.144  Sum_probs=28.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      -|++++|.|..|.++.+.|.+.|++|.-|-..+
T Consensus        22 ~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECCCHHHHHHHHHHhhcccceEEEeeec
Confidence            589999999999999999988899987665544

>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: FkbM-like
domain: Methyltransferase FkbM
species: Methylobacillus flagellatus [TaxId: 405]

Probab=87.25  E-value=0.096  Score=41.71  Aligned_cols=33  Identities=15%  Similarity=0.349  Sum_probs=30.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      .+|+++|+|.||..++..|.++|.+|+|++=..
T Consensus        39 ~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~d~~   71 (395)
T d2py6a1          39 TRLVILGTKGFGAHLMNVRHERPCEVIAAVDDF   71 (395)
T ss_dssp             CEEEEECSSSTHHHHHSCSSSCSSEEEEEECTT
T ss_pred             ceEEEEcCchhHHHHHHHHHHCCceEEEEecCc
Confidence            579999999999999999999999999998764

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=87.20  E-value=0.5  Score=30.65  Aligned_cols=34  Identities=15%  Similarity=0.228  Sum_probs=29.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +-||+++|.|.+|.++...|.+.|.+|.-|...+
T Consensus        22 p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence            3689999999999999999988899998777653

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=87.12  E-value=0.37  Score=32.96  Aligned_cols=27  Identities=22%  Similarity=0.394  Sum_probs=22.9

Q ss_pred             EEEEcC-CHHHHHHHHHHHhCCC-eEEEE
Q psy16773         64 VAVIGQ-SSFAAEVYKLLKKNGH-SVVGV   90 (124)
Q Consensus        64 IVFmGT-p~FAa~iLeeLl~~gh-eVvgV   90 (124)
                      |++.|. |-+|..+.++|+++|+ +|++|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~   30 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVV   30 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEE
Confidence            667777 8899999999999995 78776

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=86.99  E-value=0.62  Score=31.40  Aligned_cols=30  Identities=27%  Similarity=0.244  Sum_probs=26.2

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEE
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgV   90 (124)
                      ..||+++|.|.-|..+-..|.++|++|+-+
T Consensus         4 ~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~   33 (265)
T d2voua1           4 TDRIAVVGGSISGLTAALMLRDAGVDVDVY   33 (265)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCcEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence            478999999999998888888999998855

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.99  E-value=0.43  Score=32.92  Aligned_cols=34  Identities=21%  Similarity=0.132  Sum_probs=27.4

Q ss_pred             CCCceEEEEcCCHHHHHHHHHHHhCC----CeEEEEEc
Q psy16773         59 KCDLRVAVIGQSSFAAEVYKLLKKNG----HSVVGVFT   92 (124)
Q Consensus        59 ~k~MKIVFmGTp~FAa~iLeeLl~~g----heVvgVVT   92 (124)
                      .+.++|+++|.|.+|..+++.|.++.    .+|++|.-
T Consensus         2 ~k~i~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~   39 (168)
T d1ebfa1           2 TKVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAE   39 (168)
T ss_dssp             CSEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEEC
T ss_pred             CCEEEEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEE
Confidence            35589999999999999999988653    36777764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.93  E-value=0.72  Score=29.96  Aligned_cols=31  Identities=26%  Similarity=0.221  Sum_probs=27.8

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      -||+++|.|.+|.++-+.|.+.|.+|.-|..
T Consensus        21 ~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~   51 (122)
T d1h6va2          21 GKTLVVGASYVALECAGFLAGIGLDVTVMVR   51 (122)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CeEEEECCCccHHHHHHHHhhcCCeEEEEEe
Confidence            4799999999999999999999999998753

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.92  E-value=0.73  Score=29.80  Aligned_cols=33  Identities=18%  Similarity=0.184  Sum_probs=29.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      -||+++|.|.+|.++-..|.+.|.+|.-|...+
T Consensus        23 k~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence            579999999999999999999999998877755

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.79  E-value=0.67  Score=30.49  Aligned_cols=36  Identities=28%  Similarity=0.216  Sum_probs=29.7

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .-||+++|.|..|.++.+.|.+.|++|.-|-.. |++
T Consensus        35 ~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~-~~~   70 (133)
T d1q1ra2          35 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTA-ARV   70 (133)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-SST
T ss_pred             CCEEEEECCchHHHHHHHHHHhhCcceeeeeec-ccc
Confidence            468999999999999999999999997655544 444

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.79  E-value=1  Score=30.56  Aligned_cols=36  Identities=17%  Similarity=0.001  Sum_probs=30.1

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      -||+++|.|+.|..+...+++.|.+.+-++..-|++
T Consensus        46 ~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~~~   81 (153)
T d1gtea3          46 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFV   81 (153)
T ss_dssp             SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGG
T ss_pred             CEEEEECCChhHHHHHHHHHHcCCcceeEEEeCChh
Confidence            479999999999999999988887777777766654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=86.71  E-value=0.33  Score=34.43  Aligned_cols=31  Identities=19%  Similarity=0.425  Sum_probs=28.6

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVT   92 (124)
                      |||++-|-|.+|.-+++.|.+++.+|++|--
T Consensus         1 ikigINGfGRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGINGFGRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEECCcHHHHHHHHHHhcCCCEEEEECC
Confidence            7999999999999999999988899999873

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=86.10  E-value=0.36  Score=31.02  Aligned_cols=36  Identities=14%  Similarity=0.090  Sum_probs=27.3

Q ss_pred             CCCCceEEEEcCCHHHHHHHHH-HHhCCCeEEEEEcC
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKL-LKKNGHSVVGVFTV   93 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLee-Ll~~gheVvgVVTq   93 (124)
                      ..+..||-|+|-+..|.-.|.. |.++||+|.|-=..
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~   41 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIA   41 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESC
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            3455899999999989877654 45679999987443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=86.01  E-value=0.75  Score=28.35  Aligned_cols=36  Identities=14%  Similarity=0.081  Sum_probs=31.4

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .||+++|-|.-|..+.+.|.++|++|.+.=..++.+
T Consensus         6 K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~   41 (93)
T d2jfga1           6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP   41 (93)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCT
T ss_pred             CEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCch
Confidence            579999999999999999999999999988766644

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=85.99  E-value=0.48  Score=30.34  Aligned_cols=31  Identities=19%  Similarity=0.338  Sum_probs=25.1

Q ss_pred             ceEEEEcCCHHHHHHHHHH-HhCCCeEEEEEc
Q psy16773         62 LRVAVIGQSSFAAEVYKLL-KKNGHSVVGVFT   92 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeL-l~~gheVvgVVT   92 (124)
                      |||=|+|-+..|.-.|..+ .++||+|.|==.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~   33 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNI   33 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeC
Confidence            8999999999999777554 468999988643

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=85.89  E-value=0.54  Score=29.07  Aligned_cols=34  Identities=24%  Similarity=0.377  Sum_probs=26.5

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCC-eEEEEEcCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGH-SVVGVFTVVDKA   97 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gh-eVvgVVTqPDKP   97 (124)
                      ||+++|+|.-|..+-..|.++|+ +|+ |+=.-|++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~-vlE~~~~~   36 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLL-ILEATDHI   36 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEE-EECSSSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEE-EEECCCCC
Confidence            59999999999999888989995 674 45444444

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=85.85  E-value=0.55  Score=32.71  Aligned_cols=34  Identities=24%  Similarity=0.365  Sum_probs=26.5

Q ss_pred             CCCceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEc
Q psy16773         59 KCDLRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFT   92 (124)
Q Consensus        59 ~k~MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVT   92 (124)
                      ++++||+++|. |-.|.+.++-|.++ ..||..+..
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            46799999999 99999999877654 358776643

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.84  E-value=0.34  Score=34.09  Aligned_cols=33  Identities=33%  Similarity=0.410  Sum_probs=29.0

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      ||+++|+|-.|..+-..+..+||+|+.+-..++
T Consensus         6 kvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           6 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCcEEEEECChH
Confidence            899999999999998888889999987766654

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=85.70  E-value=0.54  Score=31.32  Aligned_cols=28  Identities=25%  Similarity=0.400  Sum_probs=20.9

Q ss_pred             CceEEEEcCCHHHHH-HHHHHHhC-CCeEE
Q psy16773         61 DLRVAVIGQSSFAAE-VYKLLKKN-GHSVV   88 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~-iLeeLl~~-gheVv   88 (124)
                      +|||+++|.|.+|.. .+..|.+. +.+++
T Consensus         1 tirvgiiG~G~~~~~~~~~~l~~~~~~~~~   30 (167)
T d1xeaa1           1 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV   30 (167)
T ss_dssp             CEEEEEECCCHHHHHTHHHHHTTSTTEEEE
T ss_pred             CeEEEEEcCCHHHHHHHHHHHHhCCCcEEE
Confidence            489999999999976 66666554 35664

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.26  E-value=0.8  Score=31.38  Aligned_cols=33  Identities=12%  Similarity=0.272  Sum_probs=27.4

Q ss_pred             ceEEEEcC-CHHHHHHHHHHHhC-CCeEEEEEcCC
Q psy16773         62 LRVAVIGQ-SSFAAEVYKLLKKN-GHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT-p~FAa~iLeeLl~~-gheVvgVVTqP   94 (124)
                      |||+++|. |-.|.+.++-|.++ .++|..+...-
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s   36 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITALTVSA   36 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEeeEeec
Confidence            89999996 99999999988775 46888887643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=85.24  E-value=0.46  Score=34.17  Aligned_cols=33  Identities=18%  Similarity=0.194  Sum_probs=27.3

Q ss_pred             EEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         64 VAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        64 IVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      +++-| ++.+|..+-++|+++|++|+.+-.+.++
T Consensus        28 alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~   61 (294)
T d1w6ua_          28 AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDV   61 (294)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence            44455 5999999999999999999998877653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.20  E-value=0.69  Score=33.42  Aligned_cols=35  Identities=20%  Similarity=0.242  Sum_probs=26.2

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDKP   97 (124)
                      -||+++|+|.-|..++.+|+++|  ++|+ |+=+-+++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~-vfEk~~~i   41 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVT-LFERRGSP   41 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEE-EECSSSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEE-EEECCCCC
Confidence            37999999999999999998765  5775 44444433

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.15  E-value=0.49  Score=32.16  Aligned_cols=36  Identities=14%  Similarity=0.058  Sum_probs=28.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPDKP   97 (124)
                      |||+++|+|.+|..+.-.|..++  .|++.+=..+++.
T Consensus         1 MKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~   38 (142)
T d1ojua1           1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLA   38 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchh
Confidence            89999999999998877777655  4788776666553

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=85.05  E-value=0.7  Score=33.00  Aligned_cols=33  Identities=18%  Similarity=0.280  Sum_probs=22.5

Q ss_pred             ceEEEEcC--CH-----H---HHHHHHHHHhCCCeEEEEEcCC
Q psy16773         62 LRVAVIGQ--SS-----F---AAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        62 MKIVFmGT--p~-----F---Aa~iLeeLl~~gheVvgVVTqP   94 (124)
                      |||+|++.  |.     .   +....++|.++||+|.-|....
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~   43 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH   43 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecCC
Confidence            89999885  22     2   2345677888999997665333

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.86  E-value=0.53  Score=31.09  Aligned_cols=32  Identities=22%  Similarity=0.183  Sum_probs=28.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      +..||+++|.|.+|..-++.|++.|-+|+-|-
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA~VtVva   43 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVS   43 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence            34789999999999999999999998887774

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.57  E-value=0.45  Score=31.97  Aligned_cols=25  Identities=20%  Similarity=0.240  Sum_probs=21.3

Q ss_pred             CCCCceEEEEcCCHHHHHHHHHHHh
Q psy16773         58 HKCDLRVAVIGQSSFAAEVYKLLKK   82 (124)
Q Consensus        58 ~~k~MKIVFmGTp~FAa~iLeeLl~   82 (124)
                      .+.+|||+++|.|.+|...++.|.+
T Consensus         4 ~~~k~kv~iIG~G~~g~~h~~~l~~   28 (172)
T d1lc0a1           4 NSGKFGVVVVGVGRAGSVRLRDLKD   28 (172)
T ss_dssp             CCCSEEEEEECCSHHHHHHHHHHTS
T ss_pred             CCCCcEEEEEcCCHHHHHHHHHHHh
Confidence            4567999999999999998887754

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=84.39  E-value=0.7  Score=31.68  Aligned_cols=35  Identities=29%  Similarity=0.258  Sum_probs=27.8

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      +..||+++|+|+.|..+++.|...|+.-+-|+-+.
T Consensus        23 ~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt   57 (159)
T d1gpja2          23 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT   57 (159)
T ss_dssp             TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred             ccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCc
Confidence            34689999999999999999998887545555443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.38  E-value=0.96  Score=30.15  Aligned_cols=37  Identities=14%  Similarity=0.121  Sum_probs=30.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .-+|+++|+|.+|.-.++.+...|.+|+++-.+++|.
T Consensus        28 g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~   64 (168)
T d1piwa2          28 GKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR   64 (168)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred             CCEEEEECCCCcchhHHHHhhhccccccccccchhHH
Confidence            3679999999999988877666789999988887764

>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: DR1281-like
domain: Hypothetical protein MPN349
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=84.36  E-value=0.086  Score=41.38  Aligned_cols=64  Identities=11%  Similarity=0.072  Sum_probs=49.9

Q ss_pred             CCCceEEEEcC--CHHHHHHHHHHHh---CCCeEEEEEcCCCCCCCCCcc-eeeehhhhcceeeeeecCC
Q psy16773         59 KCDLRVAVIGQ--SSFAAEVYKLLKK---NGHSVVGVFTVVDKANREDIV-DEMYSLWRVALTATFTSGP  122 (124)
Q Consensus        59 ~k~MKIVFmGT--p~FAa~iLeeLl~---~gheVvgVVTqPDKP~g~~~l-~~~~~~~r~~~~~~~~~~~  122 (124)
                      .++|||.|+|-  |.-|...+++.+.   +.|++-.|+.+-.+.+++-++ .-.+..+...|---.|+|-
T Consensus         2 ~~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k~~~eL~~~GvDvIT~GN   71 (281)
T d1t71a_           2 MNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYITMGN   71 (281)
T ss_dssp             CCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCEEECCT
T ss_pred             CccceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcCCCHHHHHHHHHhCCcEEEcCc
Confidence            46799999999  9999988877552   358899999999999888887 4455666777777777763

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.18  E-value=0.59  Score=31.44  Aligned_cols=34  Identities=12%  Similarity=0.193  Sum_probs=25.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCC--CeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNG--HSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~g--heVvgVVTqPD   95 (124)
                      |||.++|+|.+|..+.-.|+.++  .|++.+=..++
T Consensus         1 mKI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~   36 (140)
T d1a5za1           1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKK   36 (140)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccc
Confidence            89999999999998877777655  47766644443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.07  E-value=0.5  Score=29.71  Aligned_cols=29  Identities=24%  Similarity=0.250  Sum_probs=24.0

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCC--eEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGH--SVVGV   90 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gh--eVvgV   90 (124)
                      -||+++|.|..|.++..+|.+.++  +|+-+
T Consensus         3 krivIvGgG~~G~e~A~~l~~~~~~~~Vtli   33 (186)
T d1fcda1           3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLI   33 (186)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             CcEEEECccHHHHHHHHHHHHcCCCCcEEEE
Confidence            489999999999999999988765  55544

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.89  E-value=0.88  Score=30.71  Aligned_cols=32  Identities=25%  Similarity=0.327  Sum_probs=24.5

Q ss_pred             CceEEEEcC-CHHHHHHHHHHHhCCC---eEEEEEc
Q psy16773         61 DLRVAVIGQ-SSFAAEVYKLLKKNGH---SVVGVFT   92 (124)
Q Consensus        61 ~MKIVFmGT-p~FAa~iLeeLl~~gh---eVvgVVT   92 (124)
                      +|||+++|. |-.|.+.++-|.+++|   ++..+.+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s   37 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   37 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence            489999998 9999999987765444   6765544

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=83.84  E-value=1  Score=31.37  Aligned_cols=35  Identities=23%  Similarity=0.454  Sum_probs=30.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         63 RVAVIGQ-SSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        63 KIVFmGT-p~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      ||++.|. +.+|..+-+.|.++|++|+.+-..+++.
T Consensus         4 kVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~   39 (235)
T d1ooea_           4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ   39 (235)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc
Confidence            6888888 9999999999999999999987776643

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.46  E-value=1.9  Score=28.62  Aligned_cols=37  Identities=11%  Similarity=0.125  Sum_probs=27.0

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      +|+|+++|.|.-|..+-..|.++|.+-+.|+=+-+.+
T Consensus         1 ~~~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~~   37 (288)
T d3c96a1           1 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI   37 (288)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence            3899999999999988777878895344455444433

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=83.45  E-value=0.75  Score=31.49  Aligned_cols=29  Identities=17%  Similarity=0.220  Sum_probs=25.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEE
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGV   90 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgV   90 (124)
                      ..|+++|.|-.|..+.-+|.++|++|+-+
T Consensus         5 ~DvvIIGaGi~Gls~A~~La~~G~~V~vl   33 (276)
T d1ryia1           5 YEAVVIGGGIIGSAIAYYLAKENKNTALF   33 (276)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence            56999999999999999999999998744

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.43  E-value=0.66  Score=30.57  Aligned_cols=37  Identities=16%  Similarity=0.102  Sum_probs=31.5

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .-+|+++|.|.+|.-+++.+...|++|+++-.+++|.
T Consensus        28 g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~   64 (166)
T d1llua2          28 GQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKL   64 (166)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEeeccccHHHHHHHHHHcCCccceecchhhHH
Confidence            3579999999999998887777899999998887764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=82.96  E-value=1.3  Score=27.84  Aligned_cols=43  Identities=14%  Similarity=0.078  Sum_probs=31.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCCc
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANREDI  102 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g~~~  102 (124)
                      +..||+++|++.=|..+..+|.+..-+++-+.+.+.....+..
T Consensus        31 ~gK~VlVVG~g~Sa~dia~~l~~~ak~v~~~~~r~~~~~~~~~   73 (107)
T d2gv8a2          31 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGDIQNES   73 (107)
T ss_dssp             TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCSCBCSS
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHhcCEEEEEEecCcccccccc
Confidence            3478999999999999999987655456666666654444433

>d1meoa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Glycinamide ribonucleotide transformylase, GART
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.71  E-value=0.91  Score=32.28  Aligned_cols=34  Identities=21%  Similarity=0.210  Sum_probs=21.5

Q ss_pred             eEEEE--cCCHHHHHHHHHHHh--CCCeEEEEEcCCCC
Q psy16773         63 RVAVI--GQSSFAAEVYKLLKK--NGHSVVGVFTVVDK   96 (124)
Q Consensus        63 KIVFm--GTp~FAa~iLeeLl~--~gheVvgVVTqPDK   96 (124)
                      ||+++  |+|.-...+|++..+  .+++|++|+|+.+.
T Consensus         2 ri~vl~SG~Gsnl~aLl~~~~~~~l~~~I~~Vitn~~~   39 (205)
T d1meoa_           2 RVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAA   39 (205)
T ss_dssp             EEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTT
T ss_pred             EEEEEEeCCcHhHHHHHHHHhcCCCCCEEEEEEECCcc
Confidence            78877  556543444444432  25899999995543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=82.56  E-value=0.61  Score=30.77  Aligned_cols=36  Identities=22%  Similarity=0.115  Sum_probs=30.7

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      -+|+++|+|.+|.-+++.+...|.+|+++-..++|.
T Consensus        28 ~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~   63 (170)
T d1e3ja2          28 TTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL   63 (170)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CEEEEEcccccchhhHhhHhhhcccccccchHHHHH
Confidence            478999999999999887777899999998887754

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.80  E-value=0.64  Score=31.03  Aligned_cols=39  Identities=15%  Similarity=0.159  Sum_probs=28.6

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCe------EEEEEcCCCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHS------VVGVFTVVDKANR   99 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~ghe------VvgVVTqPDKP~g   99 (124)
                      ++||+++|+|.-|..+-..|.++||+      =+-|+=.-|++.|
T Consensus         2 p~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~GG   46 (239)
T d1lqta2           2 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG   46 (239)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred             CcEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCCCCC
Confidence            48999999999999999899887753      1345545555543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.76  E-value=1.3  Score=29.01  Aligned_cols=35  Identities=14%  Similarity=0.094  Sum_probs=30.9

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +-+++++|.|-+|.++-+.+.+.|.+|.-|-..+.
T Consensus        26 p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            45899999999999999998888999998888764

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.67  E-value=1.2  Score=30.10  Aligned_cols=35  Identities=14%  Similarity=-0.024  Sum_probs=27.4

Q ss_pred             eEEEEcCCHHHHHHHHHHHhC--CCeEEEEEcCCCCCC
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKN--GHSVVGVFTVVDKAN   98 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~--gheVvgVVTqPDKP~   98 (124)
                      ||+++|+|.-|..+-+.|.++  ||+|+-+ -+-|+|.
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~-e~~~~~g   39 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIY-EKQLVPF   39 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSCEEEEE-CSSSSSC
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCCeEEEE-eCCCCCC
Confidence            799999999999999988764  6777644 5555553

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.55  E-value=1.1  Score=30.62  Aligned_cols=34  Identities=21%  Similarity=0.269  Sum_probs=27.7

Q ss_pred             ceEEEEc-CCHHHHHHHHHHHhCC--CeEEEEEcCCC
Q psy16773         62 LRVAVIG-QSSFAAEVYKLLKKNG--HSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmG-Tp~FAa~iLeeLl~~g--heVvgVVTqPD   95 (124)
                      |||.++| +|.+|..+.-.|..++  .|++.+-..+|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            8999999 5999999888887777  48877766654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.50  E-value=0.46  Score=31.04  Aligned_cols=37  Identities=24%  Similarity=0.171  Sum_probs=31.0

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKA   97 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP   97 (124)
                      .-+|++.|+|.+|.-++..+...|++|+++.++++|-
T Consensus        28 g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~   64 (168)
T d1rjwa2          28 GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKL   64 (168)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHh
Confidence            3578999999999999888878889998888777764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=81.29  E-value=0.43  Score=33.22  Aligned_cols=34  Identities=12%  Similarity=0.082  Sum_probs=28.5

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      -||+++|+|-+|..+-..++..||+|+.+-.+++
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            3699999999999988778888999997766554

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=81.05  E-value=0.87  Score=31.15  Aligned_cols=38  Identities=21%  Similarity=0.169  Sum_probs=32.4

Q ss_pred             CCCceEEEEc-CCHHHHHHHHHHHhCCCeEEEEEcCCCC
Q psy16773         59 KCDLRVAVIG-QSSFAAEVYKLLKKNGHSVVGVFTVVDK   96 (124)
Q Consensus        59 ~k~MKIVFmG-Tp~FAa~iLeeLl~~gheVvgVVTqPDK   96 (124)
                      -+..+|++.| ++.+|..+-+.|.++|++|+.+-.++++
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~   59 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDK   59 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHH
Confidence            3456899999 5999999999999999999998887765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.99  E-value=1.5  Score=27.16  Aligned_cols=37  Identities=22%  Similarity=0.249  Sum_probs=28.3

Q ss_pred             ceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q psy16773         62 LRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVDKANR   99 (124)
Q Consensus        62 MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPDKP~g   99 (124)
                      .=|+++|+|--|..+-..|.++|++|+ |+=.-|.+.|
T Consensus         6 yDviViGaG~~Gl~~A~~La~~G~~V~-vlE~~~~~GG   42 (297)
T d2bcgg1           6 YDVIVLGTGITECILSGLLSVDGKKVL-HIDKQDHYGG   42 (297)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEE-EECSSSSSCG
T ss_pred             CCEEEECcCHHHHHHHHHHHHCCCCEE-EEcCCCCCCc
Confidence            558999999999999889999999964 4444444443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.87  E-value=1.3  Score=28.54  Aligned_cols=35  Identities=20%  Similarity=0.206  Sum_probs=29.8

Q ss_pred             CceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCCC
Q psy16773         61 DLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVVD   95 (124)
Q Consensus        61 ~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqPD   95 (124)
                      +-|++++|.|-+|.+.-+.+.+.|.+|.-+-..+.
T Consensus        25 p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEccchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            35899999999999999999888999996665554

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=80.83  E-value=1.6  Score=30.04  Aligned_cols=35  Identities=20%  Similarity=0.180  Sum_probs=29.2

Q ss_pred             CCceEEEEcCCHHHHHHHHHHHhCCCeEEEEEcCC
Q psy16773         60 CDLRVAVIGQSSFAAEVYKLLKKNGHSVVGVFTVV   94 (124)
Q Consensus        60 k~MKIVFmGTp~FAa~iLeeLl~~gheVvgVVTqP   94 (124)
                      ..-||+++|.|.-|..+..+|.++||+|+-+-.++
T Consensus        48 ~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCceEEEEcccHHHHHHHHHHHHhccceeeEeecc
Confidence            44799999999999999999999999977664443

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.76  E-value=1.3  Score=28.36  Aligned_cols=28  Identities=21%  Similarity=0.224  Sum_probs=23.2

Q ss_pred             eEEEEcCCHHHHHHHHHHHhCCCeEEEEE
Q psy16773         63 RVAVIGQSSFAAEVYKLLKKNGHSVVGVF   91 (124)
Q Consensus        63 KIVFmGTp~FAa~iLeeLl~~gheVvgVV   91 (124)
                      ||+++|.|..|.++..+|. ++++|.-|-
T Consensus         2 rVvIIGgG~~G~e~A~~l~-~~~~Vtvv~   29 (167)
T d1xhca1           2 KVVIVGNGPGGFELAKQLS-QTYEVTVID   29 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHT-TTSEEEEEC
T ss_pred             eEEEECCcHHHHHHHHHHH-cCCCEEEEe
Confidence            7999999999999998885 467877543