Psyllid ID: psy16789
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 608 | 2.2.26 [Sep-21-2011] | |||||||
| P57709 | 953 | Calcium-transporting ATPa | yes | N/A | 0.787 | 0.502 | 0.583 | 1e-164 | |
| Q5R5K5 | 918 | Calcium-transporting ATPa | yes | N/A | 0.787 | 0.521 | 0.586 | 1e-164 | |
| Q80XR2 | 918 | Calcium-transporting ATPa | yes | N/A | 0.787 | 0.521 | 0.583 | 1e-163 | |
| P98194 | 919 | Calcium-transporting ATPa | yes | N/A | 0.787 | 0.521 | 0.581 | 1e-163 | |
| Q64566 | 919 | Calcium-transporting ATPa | yes | N/A | 0.787 | 0.521 | 0.583 | 1e-163 | |
| Q8R4C1 | 944 | Calcium-transporting ATPa | no | N/A | 0.784 | 0.505 | 0.543 | 1e-149 | |
| A7L9Z8 | 944 | Calcium-transporting ATPa | no | N/A | 0.774 | 0.498 | 0.543 | 1e-146 | |
| O75185 | 946 | Calcium-transporting ATPa | no | N/A | 0.817 | 0.525 | 0.500 | 1e-145 | |
| O59868 | 899 | Calcium-transporting ATPa | yes | N/A | 0.800 | 0.541 | 0.473 | 1e-130 | |
| P13586 | 950 | Calcium-transporting ATPa | yes | N/A | 0.833 | 0.533 | 0.450 | 1e-124 |
| >sp|P57709|AT2C1_BOVIN Calcium-transporting ATPase type 2C member 1 OS=Bos taurus GN=ATP2C1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 294/504 (58%), Positives = 374/504 (74%), Gaps = 25/504 (4%)
Query: 116 LHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKM 175
+ R++E GCVCN+A I ++L+G+PTEGAL+A MK GL + + Y+R EYPFSSEQK
Sbjct: 435 VSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIRKAEYPFSSEQKW 494
Query: 176 MAVR-VHKIGHNLPS----KRDGKMILSQSCSEYPKFQTL-------------------- 210
MAV+ VH+ + P K + ++ + + K QTL
Sbjct: 495 MAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYHSKGQTLTLTQQQRDLYQQEKAQMGSA 554
Query: 211 GKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI 270
G ++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD QETA AI
Sbjct: 555 GLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAVAI 614
Query: 271 ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVG 330
AS +GL + + +SG++ID M QL Q+V V VFYR +PRHK+ I+K+ Q NG +V
Sbjct: 615 ASRLGLYSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVA 674
Query: 331 MTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390
MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEGKGI+ NI+
Sbjct: 675 MTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIK 734
Query: 391 NFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKI 450
NFVRFQLSTSIAAL+LI+LATL+ PNPLNAMQILWINIIMDGPPAQSLGVEPVD DV
Sbjct: 735 NFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIR 794
Query: 451 QKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTCFVFFDM 510
+ PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTFTCFVFFDM
Sbjct: 795 KPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTFTCFVFFDM 854
Query: 511 FNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAF 570
FNALS RSQ KSVF IGL +NKMF +AV S++GQL VIYFPPLQKVFQTE+L+I D+ F
Sbjct: 855 FNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTESLSILDLLF 914
Query: 571 LTALTSTVFFVSEIKKAIERICER 594
L LTS+V V+EI K +ER E+
Sbjct: 915 LLGLTSSVCIVAEIIKKVERSREK 938
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Bos taurus (taxid: 9913) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q5R5K5|AT2C1_PONAB Calcium-transporting ATPase type 2C member 1 OS=Pongo abelii GN=ATP2C1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 295/503 (58%), Positives = 374/503 (74%), Gaps = 24/503 (4%)
Query: 116 LHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKM 175
+ R++E GCVCN+A I ++L+G+PTEGAL+A MK GL + + Y+R EYPFSSEQK
Sbjct: 401 VSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIRKAEYPFSSEQKW 460
Query: 176 MAVR-VHKIGHNLPS---KRDGKMILSQSCSEY-PKFQTL-------------------G 211
MAV+ VH+ + P + + + C+ Y K QTL G
Sbjct: 461 MAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYQSKGQTLTLTQQQRDVQQEKARMGSAG 520
Query: 212 KGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA 271
++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD QETA AIA
Sbjct: 521 LRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAIAIA 580
Query: 272 SMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGM 331
S +GL + + +SG++ID M QL Q+V V VFYR +PRHK+ I+K+ Q NG +V M
Sbjct: 581 SRLGLYSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVAM 640
Query: 332 TGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRN 391
TGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEGKGI+ NI+N
Sbjct: 641 TGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKN 700
Query: 392 FVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQ 451
FVRFQLSTSIAAL+LI+LATL+ PNPLNAMQILWINIIMDGPPAQSLGVEPVD DV +
Sbjct: 701 FVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRK 760
Query: 452 KPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTCFVFFDMF 511
PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTFTCFVFFDMF
Sbjct: 761 PPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTFTCFVFFDMF 820
Query: 512 NALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFL 571
NALS RSQ KSVF IGL +NKMF +AV S++GQL VIYFPPLQKVFQTE+L+I D+ FL
Sbjct: 821 NALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTESLSILDLLFL 880
Query: 572 TALTSTVFFVSEIKKAIERICER 594
LTS+V V+EI K +ER E+
Sbjct: 881 LGLTSSVCIVAEIIKKVERSREK 903
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Pongo abelii (taxid: 9601) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q80XR2|AT2C1_MOUSE Calcium-transporting ATPase type 2C member 1 OS=Mus musculus GN=Atp2c1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 577 bits (1487), Expect = e-163, Method: Compositional matrix adjust.
Identities = 294/504 (58%), Positives = 373/504 (74%), Gaps = 25/504 (4%)
Query: 116 LHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKM 175
+ R++E GCVCN+A I ++L+G+PTEGAL+A MK GL + + Y+R EYPFSSEQK
Sbjct: 400 VSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIRKAEYPFSSEQKW 459
Query: 176 MAVR-VHKIGHNLPS---KRDGKMILSQSCSEY-PKFQTL-------------------- 210
MAV+ VH+ + P + + + C+ Y K QTL
Sbjct: 460 MAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYNSKGQTLALTQQQRDLYQQEKARMGSA 519
Query: 211 GKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI 270
G ++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD QETA AI
Sbjct: 520 GLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAIAI 579
Query: 271 ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVG 330
AS +GL + + +SG+++D M L Q+V V VFYR +PRHK+ I+K+ Q NG +V
Sbjct: 580 ASRLGLYSKTSQSVSGEEVDTMEVQHLSQIVPKVAVFYRASPRHKMKIIKSLQKNGAVVA 639
Query: 331 MTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390
MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEGKGI+ NI+
Sbjct: 640 MTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIK 699
Query: 391 NFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKI 450
NFVRFQLSTSIAAL+LI+LATL+ PNPLNAMQILWINIIMDGPPAQSLGVEPVD DV
Sbjct: 700 NFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIR 759
Query: 451 QKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTCFVFFDM 510
+ PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTFTCFVFFDM
Sbjct: 760 KPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTFTCFVFFDM 819
Query: 511 FNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAF 570
FNALS RSQ KSVF IGL +NKMF +AV S++GQL VIYFPPLQKVFQTE+L+I D+ F
Sbjct: 820 FNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTESLSILDLLF 879
Query: 571 LTALTSTVFFVSEIKKAIERICER 594
L LTS+V VSEI K +ER E+
Sbjct: 880 LLGLTSSVCIVSEIIKKVERSREK 903
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P98194|AT2C1_HUMAN Calcium-transporting ATPase type 2C member 1 OS=Homo sapiens GN=ATP2C1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 576 bits (1485), Expect = e-163, Method: Compositional matrix adjust.
Identities = 293/504 (58%), Positives = 373/504 (74%), Gaps = 25/504 (4%)
Query: 116 LHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKM 175
+ R++E GCVCN+A I ++L+G+PTEGAL+A MK GL + + Y+R EYPFSSEQK
Sbjct: 401 VSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIRKAEYPFSSEQKW 460
Query: 176 MAVR-VHKIGHNLPS----KRDGKMILSQSCSEYPKFQTL-------------------- 210
MAV+ VH+ + P K + ++ + K QTL
Sbjct: 461 MAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYQSKGQTLTLTQQQRDVYQQEKARMGSA 520
Query: 211 GKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI 270
G ++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD QETA AI
Sbjct: 521 GLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAVAI 580
Query: 271 ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVG 330
AS +GL + + +SG++ID M QL Q+V V VFYR +PRHK+ I+K+ Q NG +V
Sbjct: 581 ASRLGLYSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVA 640
Query: 331 MTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390
MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEGKGI+ NI+
Sbjct: 641 MTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIK 700
Query: 391 NFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKI 450
NFVRFQLSTSIAAL+LI+LATL+ PNPLNAMQILWINIIMDGPPAQSLGVEPVD DV
Sbjct: 701 NFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIR 760
Query: 451 QKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTCFVFFDM 510
+ PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTFTCFVFFDM
Sbjct: 761 KPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTFTCFVFFDM 820
Query: 511 FNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAF 570
FNALS RSQ KSVF IGL +N+MF +AV S++GQL VIYFPPLQKVFQTE+L+I D+ F
Sbjct: 821 FNALSSRSQTKSVFEIGLCSNRMFCYAVLGSIMGQLLVIYFPPLQKVFQTESLSILDLLF 880
Query: 571 LTALTSTVFFVSEIKKAIERICER 594
L LTS+V V+EI K +ER E+
Sbjct: 881 LLGLTSSVCIVAEIIKKVERSREK 904
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q64566|AT2C1_RAT Calcium-transporting ATPase type 2C member 1 OS=Rattus norvegicus GN=Atp2c1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 294/504 (58%), Positives = 373/504 (74%), Gaps = 25/504 (4%)
Query: 116 LHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKM 175
+ R++E GCVCN+A I ++L+G+PTEGAL+A MK GL + + Y+R EYPFSSEQK
Sbjct: 401 VSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIRKAEYPFSSEQKW 460
Query: 176 MAVR-VHKIGHNLPS---KRDGKMILSQSCSEY-PKFQTL-------------------- 210
MAV+ VH+ + P + + + C+ Y K QTL
Sbjct: 461 MAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYNSKGQTLALTQQQRDLYQQEKAQMGSA 520
Query: 211 GKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI 270
G ++A+A G +L L +GLVGI DPPR V+E ++TL+ SGV +K++TGD QETA AI
Sbjct: 521 GLRVLALASGPDLGQLTLLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAIAI 580
Query: 271 ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVG 330
AS +GL + + +SG+++D M L Q+V V VFYR +PRHK+ I+K+ Q NG +V
Sbjct: 581 ASRLGLYSKTSQSVSGEEVDTMEVQHLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVA 640
Query: 331 MTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390
MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEGKGI+ NI+
Sbjct: 641 MTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIK 700
Query: 391 NFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKI 450
NFVRFQLSTSIAAL+LI+LATL+ PNPLNAMQILWINIIMDGPPAQSLGVEPVD DV
Sbjct: 701 NFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIR 760
Query: 451 QKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTCFVFFDM 510
+ PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTFTCFVFFDM
Sbjct: 761 KPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTFTCFVFFDM 820
Query: 511 FNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAF 570
FNALS RSQ KSVF IGL +NKMF +AV S++GQL VIYFPPLQKVFQTE+L+I D+ F
Sbjct: 821 FNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTESLSILDLLF 880
Query: 571 LTALTSTVFFVSEIKKAIERICER 594
L LTS+V VSEI K +ER E+
Sbjct: 881 LLGLTSSVCIVSEIIKKVERSREK 904
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q8R4C1|AT2C2_RAT Calcium-transporting ATPase type 2C member 2 OS=Rattus norvegicus GN=Atp2c2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/502 (54%), Positives = 354/502 (70%), Gaps = 25/502 (4%)
Query: 118 RLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMA 177
+L+E GCV NNA + ++++GQPTEGAL+ MK L ++ + Y+R KE PFSSEQK MA
Sbjct: 432 KLVEAGCVANNAVVRKNAVMGQPTEGALVVLAMKMNLGSIKDSYIRKKEIPFSSEQKWMA 491
Query: 178 VRV-----------------HKIGHNLPSKRDGKMIL-------SQSCSEYPKFQTLGKG 213
VR ++ H+ + +G + L S E K +LG
Sbjct: 492 VRCSLKNEDEEDVYFMKGAFEEVIHHCSTYNNGGIPLPLTPQQKSYCQQEEKKMGSLGLR 551
Query: 214 LVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM 273
++A+A G L L ++GLVGI DPPR V+E + L +S V VK+VTGD ETA AI
Sbjct: 552 VLALASGPELGRLTFLGLVGIIDPPRAGVKEAVQALSESDVSVKMVTGDALETALAIGRT 611
Query: 274 VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTG 333
+GL K +SG++++ M + L V V+VF+R +P+HK+ I+KA Q +G IV MTG
Sbjct: 612 IGLCDEKLKAMSGEEVEGMEQDALAARVRQVSVFFRTSPKHKVKIIKALQESGAIVAMTG 671
Query: 334 DGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFV 393
DGVND VALK ADIGIAMG+ GTDV KEAADMILVDDDF+ I++A+EEGKGIFYNI+NFV
Sbjct: 672 DGVNDSVALKSADIGIAMGQTGTDVSKEAADMILVDDDFSAIMSAVEEGKGIFYNIKNFV 731
Query: 394 RFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKP 453
RFQLSTSIAALSLI L+T+ +PNPLNAMQILW+NIIMDGPPAQSLGVEPVD D + P
Sbjct: 732 RFQLSTSIAALSLITLSTVCNLPNPLNAMQILWVNIIMDGPPAQSLGVEPVDRDALKRPP 791
Query: 454 RNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSK-RDTTMTFTCFVFFDMFN 512
R+VK+ ++ RAL++ +LMSA++I+ GTL++F RE+ +N S R TTM FTCFVFFD+FN
Sbjct: 792 RSVKDTILNRALILKILMSAAVILGGTLFIFWREIPENRTSTPRTTTMAFTCFVFFDLFN 851
Query: 513 ALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLT 572
ALSCRSQ K +F IG F N+MFL+++ S++GQL VIY PPLQKVFQTE L+ D+ LT
Sbjct: 852 ALSCRSQTKLIFEIGFFRNRMFLYSILGSLLGQLAVIYAPPLQKVFQTENLSALDLLLLT 911
Query: 573 ALTSTVFFVSEIKKAIERICER 594
L S+VF +SE+ K E+ C R
Sbjct: 912 GLASSVFILSELLKLCEKFCSR 933
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|A7L9Z8|AT2C2_MOUSE Calcium-transporting ATPase type 2C member 2 OS=Mus musculus GN=Atp2c2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/508 (54%), Positives = 349/508 (68%), Gaps = 37/508 (7%)
Query: 118 RLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMA 177
+L+E GCV NNA I ++++GQPTEGAL+ MK L ++ + YVR KE PFSSEQK MA
Sbjct: 432 KLVEAGCVANNAVIRKNAVMGQPTEGALVVLAMKMNLGSIKDSYVRKKEIPFSSEQKWMA 491
Query: 178 VRVHKIGHNLPSKRDGKMI---------LSQSCSEY---------------------PKF 207
VR P DG+ I + CS Y K
Sbjct: 492 VRCG------PKSEDGEDIYFMKGAFEEVIHHCSMYNNGGIPLPLTPQQKSYCQQEEKKM 545
Query: 208 QTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETA 267
+LG ++A+A G L L ++GLVGI DPPR V+E + L +SGV VK+VTGD ETA
Sbjct: 546 GSLGLRVLALASGPELGRLTFLGLVGIIDPPRAGVKEAVQVLSESGVSVKMVTGDALETA 605
Query: 268 TAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGV 327
AI +GL K +SG++++ + L V V+VF+R +P+HK+ I+KA Q +G
Sbjct: 606 LAIGRTIGLCNEKLKAMSGEEVEGTEQGALAARVRQVSVFFRTSPKHKVKIIKALQESGA 665
Query: 328 IVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFY 387
IV MTGDGVND VALK ADIGIAMG+ GTDV KEAA+MILVDDDF+ I++A+EEGKGIFY
Sbjct: 666 IVAMTGDGVNDSVALKSADIGIAMGQTGTDVSKEAANMILVDDDFSAIMSAVEEGKGIFY 725
Query: 388 NIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDD 447
NI+NFVRFQLSTSIAALSLI L+T+ +P+PLNAMQILW+NIIMDGPPAQSLGVEPVD D
Sbjct: 726 NIKNFVRFQLSTSIAALSLITLSTVCNLPSPLNAMQILWVNIIMDGPPAQSLGVEPVDRD 785
Query: 448 VKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSK-RDTTMTFTCFV 506
+ PR+V + ++ RAL++ VLMSA++II GTL++F RE+ N S R TTM FTCFV
Sbjct: 786 ALRRPPRSVGDTILNRALILRVLMSAAVIIGGTLFIFWREIPANGTSTPRTTTMAFTCFV 845
Query: 507 FFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTIN 566
FFD+FNALSCRSQ K +F IG F N+MFL++V S++GQL VIY PPLQKVFQTE L+
Sbjct: 846 FFDLFNALSCRSQTKLIFEIGFFRNRMFLYSVLGSLLGQLAVIYAPPLQKVFQTENLSAL 905
Query: 567 DIAFLTALTSTVFFVSEIKKAIERICER 594
D+ LT L S+VF +SE+ K E+ R
Sbjct: 906 DLLLLTGLASSVFILSELLKLWEKFLSR 933
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O75185|AT2C2_HUMAN Calcium-transporting ATPase type 2C member 2 OS=Homo sapiens GN=ATP2C2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/561 (50%), Positives = 363/561 (64%), Gaps = 64/561 (11%)
Query: 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMM 95
G L+E GCV NNA I ++++GQPTEGAL+A MK L + Y+R KE PFSSEQK M
Sbjct: 433 GKLVEAGCVANNAVIRKNAVMGQPTEGALMALAMKMDLSDIKNSYIRKKEIPFSSEQKWM 492
Query: 96 AVRCIPKEGSSCDVDTRFFFLHRLLEVGCVC---NNASIIGDSLLGQPTEGALLAAGMKF 152
AV+C K D+ +F L EV C NN I
Sbjct: 493 AVKCSLKTEDQEDI---YFMKGALEEVIRYCTMYNNGGI--------------------- 528
Query: 153 GLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGK 212
P + +Q+ ++ K + +LG
Sbjct: 529 -------------PLPLTPQQRSFCLQEEK-----------------------RMGSLGL 552
Query: 213 GLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS 272
++A+A G L L ++GLVGI DPPR V+E + L +SGV VK++TGD ETA AI
Sbjct: 553 RVLALASGPELGRLTFLGLVGIIDPPRVGVKEAVQVLSESGVSVKMITGDALETALAIGR 612
Query: 273 MVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMT 332
+GL + +SG+++D + + +L V V+VF+R +P+HKL I+KA Q +G IV MT
Sbjct: 613 NIGLCNGKLQAMSGEEVDSVEKGELADRVGKVSVFFRTSPKHKLKIIKALQESGAIVAMT 672
Query: 333 GDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNF 392
GDGVND VALK ADIGIAMG+ GTDV KEAA+MILVDDDF+ I+ A+EEGKGIFYNI+NF
Sbjct: 673 GDGVNDAVALKSADIGIAMGQTGTDVSKEAANMILVDDDFSAIMNAVEEGKGIFYNIKNF 732
Query: 393 VRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQK 452
VRFQLSTSI+ALSLI L+T+ +P+PLNAMQILWINIIMDGPPAQSLGVEPVD D Q
Sbjct: 733 VRFQLSTSISALSLITLSTVFNLPSPLNAMQILWINIIMDGPPAQSLGVEPVDKDAFRQP 792
Query: 453 PRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS-KRDTTMTFTCFVFFDMF 511
PR+V++ +++RAL++ +LMSA+III GTL++F +EM ++ S R TTMTFTCFVFFD+F
Sbjct: 793 PRSVRDTILSRALILKILMSAAIIISGTLFIFWKEMPEDRASTPRTTTMTFTCFVFFDLF 852
Query: 512 NALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFL 571
NAL+CRSQ K +F IG N MFL++V S++GQL VIY PPLQ+VFQTE L D+ FL
Sbjct: 853 NALTCRSQTKLIFEIGFLRNHMFLYSVLGSILGQLAVIYIPPLQRVFQTENLGALDLLFL 912
Query: 572 TALTSTVFFVSEIKKAIERIC 592
T L S+VF +SE+ K E+ C
Sbjct: 913 TGLASSVFILSELLKLCEKYC 933
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O59868|ATC1_SCHPO Calcium-transporting ATPase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmr1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/528 (47%), Positives = 333/528 (63%), Gaps = 41/528 (7%)
Query: 112 RFFFLHRLLEVGCVCNNASI--IGDSLL-------GQPTEGALLAAGMKFGLYAVNEHYV 162
R + + L +CNN+ + DS+L G P + AL+ +FGL E Y
Sbjct: 367 RTVGIEKALLAAALCNNSKVHNKADSILDTTCPWAGFPVDVALIECSERFGLKDPRETYS 426
Query: 163 RLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYP----------------- 205
R+ E FSSE+K M+V V + + + SC+ +
Sbjct: 427 RISEVSFSSERKYMSVAVQYNSSKMNFMKGATEQVLSSCAYFSDQDGVQHELTAEMKENI 486
Query: 206 ---KFQTLGKGL--VAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVT 260
+F+ GL +A+A G N L + GL GI DPPRP VRE + L+ GV+V ++T
Sbjct: 487 QRNEFEMAASGLRIIAVASGINTNKLVFHGLFGINDPPRPQVRESVQYLMTGGVRVIMIT 546
Query: 261 GDGQETATAIASMVGL-------DTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313
GD TA +IA +G+ + I L+G Q+D + L+ V+ V VF R TP+
Sbjct: 547 GDSVVTAISIARSLGMAIPSNDEEAIRNYALTGAQLDDLDSSSLRDAVSRVVVFARTTPQ 606
Query: 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFN 373
HK+ IV+A Q+ G +V MTGDGVND ALK ADIGIAMG+QGTDV KEAADMIL DD F
Sbjct: 607 HKMKIVEALQSLGDVVAMTGDGVNDAPALKLADIGIAMGRQGTDVAKEAADMILTDDSFA 666
Query: 374 TIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDG 433
TI++A+EEGKGIF NI+NF+ FQLSTS+AALSLIA++++ NPLNAMQILWINI+MDG
Sbjct: 667 TILSAVEEGKGIFNNIKNFITFQLSTSVAALSLIAISSVFGFQNPLNAMQILWINILMDG 726
Query: 434 PPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIV 493
PPAQSLGVE VD+DV ++ PR P+I+ L+ VL+SA II+ T+ VF+ +M D V
Sbjct: 727 PPAQSLGVESVDEDVMMKPPRPRNAPIISVQLLQRVLLSAFIIVTVTIVVFRVQMQDGNV 786
Query: 494 SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPP 553
+ RDTTMTFTCFVFFDMFNAL+CRS+ KSVF +G+F+N+MF AV S++GQ V+Y P
Sbjct: 787 TARDTTMTFTCFVFFDMFNALACRSETKSVFKLGIFSNRMFNIAVGGSLIGQALVVYASP 846
Query: 554 LQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRSSK 601
Q++FQTEA+ + D+ L A TS+V +V EI+K R RK L +K
Sbjct: 847 FQRIFQTEAIGLKDVLILLACTSSVLWVDEIRKWYRR---RKGLVRTK 891
|
Transports calcium and manganese ions into the cell. Regulates cell morphogenesis through control of manganese and calcium homeostasis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P13586|ATC1_YEAST Calcium-transporting ATPase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PMR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/557 (45%), Positives = 348/557 (62%), Gaps = 50/557 (8%)
Query: 39 LEVGCVCNNASIIGDS--LLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMA 96
L +G +CNNAS + LG PT+ ALL F + + +++E PF+S++K+MA
Sbjct: 426 LTIGNLCNNASFSQEHAIFLGNPTDVALLEQLANFEMPDIRNTVQKVQELPFNSKRKLMA 485
Query: 97 VRCIPKEGSSCDVDTRFFFLHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYA 156
+ + + C V + F R+LE + G+ TE A A
Sbjct: 486 TKILNPVDNKCTVYVKGAF-ERILEYSTSYLKSK-------GKKTEKLTEAQKATINECA 537
Query: 157 VNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVA 216
+ L+ + F+ K+ LS S + P + L
Sbjct: 538 NSMASEGLRVFGFA-----------------------KLTLSDSST--PLTEDL------ 566
Query: 217 MARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL 276
++DL + GL+G+ DPPRP+V+ + LLQ GV + ++TGD + TA IA +G+
Sbjct: 567 ------IKDLTFTGLIGMNDPPRPNVKFAIEQLLQGGVHIIMITGDSENTAVNIAKQIGI 620
Query: 277 DTIHGK--VLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGD 334
I K VLSGD++D+M++ QL V++ V +F R TP HKL IV+A + G +V MTGD
Sbjct: 621 PVIDPKLSVLSGDKLDEMSDDQLANVIDHVNIFARATPEHKLNIVRALRKRGDVVAMTGD 680
Query: 335 GVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVR 394
GVND ALK +DIG++MG+ GTDV KEA+DM+L DDDF+TI+ AIEEGKGIF NI+NF+
Sbjct: 681 GVNDAPALKLSDIGVSMGRIGTDVAKEASDMVLTDDDFSTILTAIEEGKGIFNNIQNFLT 740
Query: 395 FQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPR 454
FQLSTS+AALSL+AL+T ++PNPLNAMQILWINI+MDGPPAQSLGVEPVD +V + PR
Sbjct: 741 FQLSTSVAALSLVALSTAFKLPNPLNAMQILWINILMDGPPAQSLGVEPVDHEVMKKPPR 800
Query: 455 NVKEPMITRALVVNVLMSASIIIVGTLYVFKREMS-DNIVSKRDTTMTFTCFVFFDMFNA 513
+ ++T ++ +L +A+ IIVGT+Y+F +EM+ D V+ RDTTMTFTCFVFFDMFNA
Sbjct: 801 KRTDKILTHDVMKRLLTTAACIIVGTVYIFVKEMAEDGKVTARDTTMTFTCFVFFDMFNA 860
Query: 514 LSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTA 573
L+CR KS+F IG FTNKMF +AV S++GQ+ IY P Q +F+TE L I+DI L
Sbjct: 861 LACRHNTKSIFEIGFFTNKMFNYAVGLSLLGQMCAIYIPFFQSIFKTEKLGISDILLLLL 920
Query: 574 LTSTVFFVSEIKKAIER 590
++S+VF V E++K R
Sbjct: 921 ISSSVFIVDELRKLWTR 937
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Has a role in the secretory pathway. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 608 | ||||||
| 242018503 | 897 | calcium-transporting ATPase type 2C memb | 0.799 | 0.541 | 0.688 | 0.0 | |
| 307170158 | 909 | Calcium-transporting ATPase type 2C memb | 0.883 | 0.590 | 0.612 | 0.0 | |
| 332027655 | 943 | Calcium-transporting ATPase type 2C memb | 0.845 | 0.545 | 0.638 | 0.0 | |
| 307209677 | 901 | Calcium-transporting ATPase type 2C memb | 0.883 | 0.596 | 0.610 | 0.0 | |
| 340719177 | 944 | PREDICTED: calcium-transporting ATPase t | 0.884 | 0.569 | 0.603 | 0.0 | |
| 380012583 | 944 | PREDICTED: calcium-transporting ATPase t | 0.884 | 0.569 | 0.597 | 0.0 | |
| 328781034 | 944 | PREDICTED: calcium-transporting ATPase t | 0.884 | 0.569 | 0.597 | 0.0 | |
| 350396135 | 944 | PREDICTED: calcium-transporting ATPase t | 0.884 | 0.569 | 0.603 | 0.0 | |
| 383848721 | 941 | PREDICTED: calcium-transporting ATPase t | 0.804 | 0.519 | 0.679 | 0.0 | |
| 350396138 | 932 | PREDICTED: calcium-transporting ATPase t | 0.855 | 0.557 | 0.612 | 0.0 |
| >gi|242018503|ref|XP_002429714.1| calcium-transporting ATPase type 2C member, putative [Pediculus humanus corporis] gi|212514720|gb|EEB16976.1| calcium-transporting ATPase type 2C member, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/524 (68%), Positives = 418/524 (79%), Gaps = 38/524 (7%)
Query: 116 LHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKM 175
++ LLEVG VCNNA I ++LLGQPTEGALLAA MK G+Y V E Y+RL E PF+SE KM
Sbjct: 381 IYELLEVGVVCNNAIIDNETLLGQPTEGALLAAAMKHGMYGVGEKYLRLHEQPFNSENKM 440
Query: 176 MAVRVHKIGHNLPSKRDGKM----------ILSQSCSEY-------------------PK 206
MAV+V +P D K + Q C +Y
Sbjct: 441 MAVKV------VPKYSDNKEEIFFVKGALEKILQQCKKYRTSNGVVPLNVKKEQDFLAEA 494
Query: 207 FQTLGKGL--VAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQ 264
F+ KGL VA+ARG+++QDL ++G+VGICDPPRP VRE ++TLL +GVKVKLVTGD +
Sbjct: 495 FEIGRKGLRVVALARGNSMQDLIFLGIVGICDPPRPKVREAITTLLSAGVKVKLVTGDAK 554
Query: 265 ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324
ETATAIA M+G+D +H +VLSGD +D M+E QL Q+++ V+VFYRVTP+HKL+IVK+ Q
Sbjct: 555 ETATAIAQMIGIDEVHSQVLSGDHLDSMSEAQLDQIISEVSVFYRVTPKHKLSIVKSLQR 614
Query: 325 NGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKG 384
NG+IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAADMILV+DDF II+AIEEGKG
Sbjct: 615 NGIIVGMTGDGVNDGVALKKADIGIAMGKTGTDVCKEAADMILVEDDFQIIISAIEEGKG 674
Query: 385 IFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPV 444
IFYNIRNFVRFQLSTSIAALSLIALATL+ IPNPLNAMQILWINIIMDGPPAQSLGVEPV
Sbjct: 675 IFYNIRNFVRFQLSTSIAALSLIALATLMGIPNPLNAMQILWINIIMDGPPAQSLGVEPV 734
Query: 445 DDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTC 504
D DV QKPRNVKEPMITR++V+NVL+SA III GTL+VFKREMSDN+++KRDTTMTFTC
Sbjct: 735 DKDVVKQKPRNVKEPMITRSVVLNVLLSALIIIGGTLWVFKREMSDNVITKRDTTMTFTC 794
Query: 505 FVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALT 564
FVFFDMFNALSCRSQ KS+FTIGLFTNKMFL AV SV+GQL VIYF PLQ VFQTEALT
Sbjct: 795 FVFFDMFNALSCRSQTKSIFTIGLFTNKMFLMAVTGSVLGQLLVIYFHPLQMVFQTEALT 854
Query: 565 INDIAFLTALTSTVFFVSEIKKAIERICERKCLRSSKKQSMDFV 608
+D+ FL LTSTVFF+SEIKK IER ER+ RS+K + +DFV
Sbjct: 855 ASDLGFLVGLTSTVFFISEIKKLIERTLERRANRSNKSE-LDFV 897
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307170158|gb|EFN62566.1| Calcium-transporting ATPase type 2C member 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/606 (61%), Positives = 442/606 (72%), Gaps = 69/606 (11%)
Query: 15 FLEKVHGDGRNSS---RIR-------SKPETGTLLEVGCVCNNASIIGDSLLGQPTEGAL 64
++ V G G N+ RIR ++ +LEVGCVCNNA I D+LLGQPTEGAL
Sbjct: 361 YIADVTGAGYNNVGEVRIRKCDNTDFARAAISNMLEVGCVCNNAIIQNDTLLGQPTEGAL 420
Query: 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGC 124
++ MKFG++ + + Y+RL+EYPFSSEQKMMAV+C PK G + +F+ LE
Sbjct: 421 ISLAMKFGMHGITDKYLRLQEYPFSSEQKMMAVKCTPKFGEN---RQEIYFVKGALE--- 474
Query: 125 VCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG 184
+L Q T ++Y + YP S
Sbjct: 475 ----------KILPQCT-----------------KYYENGQVYPLS-------------- 493
Query: 185 HNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRE 244
K+D + + +E G ++ +ARGS+LQDL Y+GLVGICDPPRPHVRE
Sbjct: 494 ----QKKDQEFL-----TEAYDIGQQGLRVIGLARGSSLQDLIYVGLVGICDPPRPHVRE 544
Query: 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304
+S L+ SGVKV +VTGD +ETA AIAS++GLDT+H ++LSGD+ID M+EHQL+Q +N+V
Sbjct: 545 SISILINSGVKVIMVTGDAKETAAAIASIIGLDTLHSRLLSGDEIDMMSEHQLEQCINNV 604
Query: 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364
+VFYRVTP+HKL IVKA Q NG IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAAD
Sbjct: 605 SVFYRVTPKHKLCIVKALQRNGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAAD 664
Query: 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424
MILVDDDF TIIAAIEEGKGIF+NIRNFVRFQLSTSIAALSLIALATL+ IPNPLNAMQI
Sbjct: 665 MILVDDDFGTIIAAIEEGKGIFHNIRNFVRFQLSTSIAALSLIALATLMSIPNPLNAMQI 724
Query: 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVF 484
LWINIIMDGPPAQSLGVEPVD DV QKPRN KEPMITR L++NVL+SA+III+GTL+V+
Sbjct: 725 LWINIIMDGPPAQSLGVEPVDKDVLKQKPRNTKEPMITRHLIINVLLSATIIILGTLWVY 784
Query: 485 KREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVG 544
REM N + RDTTMTFTCFVFFDMFNALSCRSQ KS+FTIGL++NKMFL AV SV+G
Sbjct: 785 NREMV-NGNTARDTTMTFTCFVFFDMFNALSCRSQTKSIFTIGLWSNKMFLVAVTLSVIG 843
Query: 545 QLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRSS--KK 602
Q+FVIYFPPLQ++FQTEALT D+ FL ALTS+VF +SEIKK IER +R+ + S K
Sbjct: 844 QMFVIYFPPLQRIFQTEALTAKDLLFLAALTSSVFVISEIKKFIERQLQRRHVNSQYYNK 903
Query: 603 QSMDFV 608
MDFV
Sbjct: 904 FEMDFV 909
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332027655|gb|EGI67723.1| Calcium-transporting ATPase type 2C member 1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/573 (63%), Positives = 428/573 (74%), Gaps = 59/573 (10%)
Query: 38 LLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAV 97
+LE+GCVCNNA I D LLGQPTEGAL+A MKFG+Y V + Y+RL+EYPFSSEQKMMAV
Sbjct: 428 MLEIGCVCNNAIIQNDILLGQPTEGALIAVAMKFGMYGVADRYLRLQEYPFSSEQKMMAV 487
Query: 98 RCIPKEGSSCDVDTRFFFLHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAV 157
+C PK G + +F+ LE +L Q T
Sbjct: 488 KCTPKFGEN---RQEIYFVKGALE-------------KILPQCT---------------- 515
Query: 158 NEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAM 217
++Y + YP S K+D + + +E G ++ +
Sbjct: 516 -KYYENGQVYPLS------------------QKKDQEFL-----TEAYDIGQQGLRVIGL 551
Query: 218 ARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277
ARGS+LQDL Y+GLVGICDPPRP+VRE +S L+ SGVKVK+VTGD +ETA AIASM+GLD
Sbjct: 552 ARGSSLQDLIYIGLVGICDPPRPYVRESISILINSGVKVKMVTGDAKETAAAIASMIGLD 611
Query: 278 TIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVN 337
T+H ++LSGD+ID M+EH+L+Q +NSV+VFYRVTP+HKL IVKA Q NG IVGMTGDGVN
Sbjct: 612 TLHSRLLSGDEIDMMSEHELEQCINSVSVFYRVTPKHKLCIVKALQRNGNIVGMTGDGVN 671
Query: 338 DGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQL 397
DGVALKKADIGIAMGK GTDVCKEAADMILVDDDF TIIAAIEEGKGIF+NIRNFVRFQL
Sbjct: 672 DGVALKKADIGIAMGKNGTDVCKEAADMILVDDDFGTIIAAIEEGKGIFHNIRNFVRFQL 731
Query: 398 STSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVK 457
STSIAALSLIALATL+ IPNPLNAMQILWINIIMDGPPAQSLGVEPVD DV QKPRN K
Sbjct: 732 STSIAALSLIALATLMSIPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVLKQKPRNTK 791
Query: 458 EPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTCFVFFDMFNALSCR 517
EPMITR L++NVL+SASIII+GTL+V+ REM N + RDTTMTFTCFVFFDMFNALSCR
Sbjct: 792 EPMITRHLIINVLLSASIIILGTLWVYNREMV-NGNTARDTTMTFTCFVFFDMFNALSCR 850
Query: 518 SQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTST 577
SQ KS+FTIGL++NKMFL AV SV+GQ+ VIYFPPLQ++FQTEALT D+ FL ALTS+
Sbjct: 851 SQTKSIFTIGLWSNKMFLVAVTLSVIGQMLVIYFPPLQRIFQTEALTAKDLLFLAALTSS 910
Query: 578 VFFVSEIKKAIERICERKCLRSS--KKQSMDFV 608
VF +SEIKK IER +R+ + K MDFV
Sbjct: 911 VFVISEIKKFIERQLQRRRVNGQYYNKFEMDFV 943
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307209677|gb|EFN86535.1| Calcium-transporting ATPase type 2C member 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/608 (61%), Positives = 443/608 (72%), Gaps = 71/608 (11%)
Query: 15 FLEKVHGDGRN---SSRIR-------SKPETGTLLEVGCVCNNASIIGDSLLGQPTEGAL 64
++ V G G N RIR ++ +LE+GCVCNNA I D+LLGQPTEGAL
Sbjct: 351 YIADVTGAGYNGLGEVRIRKCDSVDLARAAISNMLEIGCVCNNAIIQNDTLLGQPTEGAL 410
Query: 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGC 124
+A +KFG+Y V + Y+RL+EYPFSSEQKMMAV+C PK G + +F+ LE
Sbjct: 411 IAVAIKFGMYGVADRYLRLQEYPFSSEQKMMAVKCTPKFGEN---RQEIYFVKGALE--- 464
Query: 125 VCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG 184
+L Q T ++Y + YP S
Sbjct: 465 ----------KILPQCT-----------------KYYENGQVYPLS-------------- 483
Query: 185 HNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRE 244
K+D + + +E G ++ +ARGS+LQDL Y+GLVGICDPPRPHVRE
Sbjct: 484 ----QKKDQEFL-----TEAYDIGQQGLRVIGLARGSSLQDLIYVGLVGICDPPRPHVRE 534
Query: 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304
+ L+ SGVKVK+VTGD +ETA AIASM+GLDT+H ++LSGD+ID M+EHQL+Q +N+V
Sbjct: 535 SIGILINSGVKVKMVTGDAKETAAAIASMIGLDTLHSRLLSGDEIDMMSEHQLEQCINNV 594
Query: 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364
+VFYRVTP+HKL IVKA Q NG IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAAD
Sbjct: 595 SVFYRVTPKHKLCIVKALQRNGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAAD 654
Query: 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424
MILVDDDF TIIAAIEEGKGIF+NIRNFVRFQLSTSIAALSLIALATL+ IPNPLNAMQI
Sbjct: 655 MILVDDDFGTIIAAIEEGKGIFHNIRNFVRFQLSTSIAALSLIALATLMSIPNPLNAMQI 714
Query: 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVF 484
LWINIIMDGPPAQSLGVEPVD DV QKPRN KEPMITR L++NVL+SA+III+GTL+V+
Sbjct: 715 LWINIIMDGPPAQSLGVEPVDKDVLKQKPRNTKEPMITRHLIINVLLSATIIILGTLWVY 774
Query: 485 KREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVG 544
REM N + RDTTMTFTCFVFFDMFNALSCRSQ KS+FTIGL++NKMFL AV SV+G
Sbjct: 775 NREMV-NGNTARDTTMTFTCFVFFDMFNALSCRSQTKSIFTIGLWSNKMFLVAVTLSVIG 833
Query: 545 QLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIER-ICERKCLRSSK-- 601
Q+FVIYFPPLQ++FQTEALT D+ FL ALTS+VF +SE KK +ER + +R+ + +S+
Sbjct: 834 QMFVIYFPPLQRIFQTEALTAKDLLFLAALTSSVFVISEFKKFLERQLQKRRNVNNSQYY 893
Query: 602 -KQSMDFV 608
K MDFV
Sbjct: 894 NKFEMDFV 901
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340719177|ref|XP_003398033.1| PREDICTED: calcium-transporting ATPase type 2C member 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/606 (60%), Positives = 436/606 (71%), Gaps = 68/606 (11%)
Query: 15 FLEKVHGDGRNSS---RIR-------SKPETGTLLEVGCVCNNASIIGDSLLGQPTEGAL 64
++ V G G N RIR ++ +LEVGCVCNNA + D+LLGQPTEGAL
Sbjct: 395 YIADVTGAGYNDKGEVRIRKCDNMDLARTAISNMLEVGCVCNNAILQNDTLLGQPTEGAL 454
Query: 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGC 124
+A MK+G+Y V + Y+RL+EYPFSSEQKMMAV+C PK G + +F+ L
Sbjct: 455 IAVAMKYGMYGVADRYLRLQEYPFSSEQKMMAVKCTPKYGEN---KQEIYFVKGAL---- 507
Query: 125 VCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG 184
D +L T+ Y++N
Sbjct: 508 ---------DKILPLCTK------------YSINGQV----------------------- 523
Query: 185 HNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRE 244
H+L K+D + + +E G ++ +ARG++LQDL Y+GLVGICDPPRPHVRE
Sbjct: 524 HSLNQKKDEEFL-----TEAYDIGQQGLRVIGLARGTSLQDLMYVGLVGICDPPRPHVRE 578
Query: 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304
++TL+ SGVKVK+VTGD +ETA+AIASM+GLD +H +++SGD+ID M+EHQL+Q +NSV
Sbjct: 579 SITTLINSGVKVKMVTGDAKETASAIASMIGLDVLHSRLISGDEIDLMSEHQLEQCINSV 638
Query: 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364
+VFYRVTP+HKL IVKA Q G IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAAD
Sbjct: 639 SVFYRVTPKHKLCIVKALQREGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAAD 698
Query: 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424
MILVDDDF TIIAAIEEGKGIF+NIRNFVRFQLSTSIAALSLIALATL+ IPNPLNAMQI
Sbjct: 699 MILVDDDFETIIAAIEEGKGIFHNIRNFVRFQLSTSIAALSLIALATLMGIPNPLNAMQI 758
Query: 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVF 484
LWINIIMDGPPAQSLGVEPVD DV QKPRN KEPMITR L++NVL+SA+III+GTL+V+
Sbjct: 759 LWINIIMDGPPAQSLGVEPVDKDVLKQKPRNTKEPMITRQLIINVLLSATIIIIGTLWVY 818
Query: 485 KREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVG 544
EM+ + + RDTTMTFTCFVFFDMFNALSCRSQ KS+FTIGLF+NKMFL AV SV+G
Sbjct: 819 NNEMTTDGNTARDTTMTFTCFVFFDMFNALSCRSQTKSIFTIGLFSNKMFLVAVTLSVIG 878
Query: 545 QLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICE--RKCLRSSKK 602
Q+ VIYFPPLQ+VFQTEAL+ DI L +TS+VF +SEIKK IER R R K
Sbjct: 879 QMLVIYFPPLQRVFQTEALSAADILVLVGITSSVFIISEIKKLIERQLYNLRAGTRYHNK 938
Query: 603 QSMDFV 608
MDFV
Sbjct: 939 SEMDFV 944
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380012583|ref|XP_003690359.1| PREDICTED: calcium-transporting ATPase type 2C member 1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/606 (59%), Positives = 439/606 (72%), Gaps = 68/606 (11%)
Query: 15 FLEKVHGDGRNSS---RIR-------SKPETGTLLEVGCVCNNASIIGDSLLGQPTEGAL 64
++ + G G N RIR ++ +LEVGCVCNNA I D+LLGQPTEGAL
Sbjct: 395 YIADITGTGYNDKGDVRIRKCDNMNLARNAISNMLEVGCVCNNAIIQNDTLLGQPTEGAL 454
Query: 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGC 124
+A MK+G+Y +++ Y+RL+EYPFSSEQKMMAV+C PK G + +F L ++
Sbjct: 455 IALAMKYGMYGISDKYLRLQEYPFSSEQKMMAVKCTPKYGE--NKQEIYFVKGALDKILP 512
Query: 125 VCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG 184
+C S+ G Y++N+ K+ F +E ++IG
Sbjct: 513 LCTKYSVNGQE-------------------YSLNQK----KDEEFLTE-------AYEIG 542
Query: 185 HNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRE 244
G ++ +ARG +LQDL Y+GL+GICDPPRPHVRE
Sbjct: 543 QQ------------------------GLRVIGLARGKSLQDLMYVGLIGICDPPRPHVRE 578
Query: 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304
++TL+ SGVKVK+VTGD +ETA+AIASM+GLD +H +++SGD+ID M+EHQL+Q +N+V
Sbjct: 579 SITTLINSGVKVKMVTGDAKETASAIASMIGLDVLHSRLISGDEIDLMSEHQLEQCINNV 638
Query: 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364
+VFYRVTP+HKL IVKA Q G IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAAD
Sbjct: 639 SVFYRVTPKHKLAIVKALQREGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAAD 698
Query: 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424
MILVDDDF TIIAAIEEGKGIF+NIRNF+RFQLSTSIAALSLIALATL+ I NPLNAMQI
Sbjct: 699 MILVDDDFETIIAAIEEGKGIFHNIRNFLRFQLSTSIAALSLIALATLMGIANPLNAMQI 758
Query: 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVF 484
LWINIIMDGPPAQSLGVEPVD DV QKPRN+KEPMITR L++NVL+SA+III+GTL+V+
Sbjct: 759 LWINIIMDGPPAQSLGVEPVDKDVLKQKPRNIKEPMITRHLIINVLLSATIIIIGTLWVY 818
Query: 485 KREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVG 544
+EM + + RDTTMTFTCFVFFDMFNALSCRSQ KS+FTIGL++NKMFL AV SV+G
Sbjct: 819 NKEMRTDGNTARDTTMTFTCFVFFDMFNALSCRSQTKSIFTIGLWSNKMFLVAVALSVIG 878
Query: 545 QLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIER--ICERKCLRSSKK 602
Q+ VIYFPPLQ+VFQTEAL+ DI FL ALTS+VF +SEIKK IER R + K
Sbjct: 879 QMLVIYFPPLQRVFQTEALSAIDILFLVALTSSVFIISEIKKFIERQLFKRRAGTQYYNK 938
Query: 603 QSMDFV 608
MDFV
Sbjct: 939 SEMDFV 944
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328781034|ref|XP_001120297.2| PREDICTED: calcium-transporting ATPase type 2C member 1-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/606 (59%), Positives = 439/606 (72%), Gaps = 68/606 (11%)
Query: 15 FLEKVHGDGRNSS---RIR-------SKPETGTLLEVGCVCNNASIIGDSLLGQPTEGAL 64
++ + G G N RIR ++ +LEVGCVCNNA I D+LLGQPTEGAL
Sbjct: 395 YIADITGTGYNDKGDVRIRKCDNMNLARNAISNMLEVGCVCNNAIIQNDTLLGQPTEGAL 454
Query: 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGC 124
+A MK+G+Y +++ Y+RL+EYPFSSEQKMMAV+C PK G + +F L ++
Sbjct: 455 IALAMKYGMYGISDKYLRLQEYPFSSEQKMMAVKCTPKYGE--NKQEIYFVKGALDKILP 512
Query: 125 VCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG 184
+C S+ G Y++N+ K+ F +E ++IG
Sbjct: 513 LCTKYSVNGQE-------------------YSLNQK----KDEEFLTE-------AYEIG 542
Query: 185 HNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRE 244
G ++ +ARG +LQDL Y+GL+GICDPPRPHVRE
Sbjct: 543 QQ------------------------GLRVIGLARGKSLQDLMYVGLIGICDPPRPHVRE 578
Query: 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304
++TL+ SGVKVK+VTGD +ETA+AIASM+GLD +H +++SGD+ID M+EHQL+Q +N+V
Sbjct: 579 SITTLINSGVKVKMVTGDAKETASAIASMIGLDVLHSRLISGDEIDLMSEHQLEQCINNV 638
Query: 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364
+VFYRVTP+HKL IVKA Q G IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAAD
Sbjct: 639 SVFYRVTPKHKLAIVKALQREGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAAD 698
Query: 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424
MILVDDDF TIIAAIEEGKGIF+NIRNF+RFQLSTSIAALSLIALATL+ I NPLNAMQI
Sbjct: 699 MILVDDDFETIIAAIEEGKGIFHNIRNFLRFQLSTSIAALSLIALATLMGIANPLNAMQI 758
Query: 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVF 484
LWINIIMDGPPAQSLGVEPVD DV QKPRN+KEPMITR L++NVL+SA+III+GTL+V+
Sbjct: 759 LWINIIMDGPPAQSLGVEPVDKDVLKQKPRNIKEPMITRHLIINVLLSATIIIIGTLWVY 818
Query: 485 KREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVG 544
+EM + + RDTTMTFTCFVFFDMFNALSCRSQ KS+FTIGL++NKMFL AV SV+G
Sbjct: 819 NKEMRTDGNTARDTTMTFTCFVFFDMFNALSCRSQTKSIFTIGLWSNKMFLVAVALSVIG 878
Query: 545 QLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIER--ICERKCLRSSKK 602
Q+ VIYFPPLQ+VFQTEAL+ DI FL ALTS+VF +SEIKK IER R + K
Sbjct: 879 QMLVIYFPPLQRVFQTEALSAIDILFLVALTSSVFIISEIKKFIERQLFRRRAGTQYYNK 938
Query: 603 QSMDFV 608
MDFV
Sbjct: 939 SEMDFV 944
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350396135|ref|XP_003484454.1| PREDICTED: calcium-transporting ATPase type 2C member 1-like isoform 1 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/606 (60%), Positives = 436/606 (71%), Gaps = 68/606 (11%)
Query: 15 FLEKVHGDGRNSS---RIR-------SKPETGTLLEVGCVCNNASIIGDSLLGQPTEGAL 64
++ V G G N RIR ++ +LEVGCVCNNA + D+LLGQPTEGAL
Sbjct: 395 YIADVTGAGYNDKGEVRIRKCDNMDLARTAISNMLEVGCVCNNAILQNDTLLGQPTEGAL 454
Query: 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGC 124
+A MK+G+Y V + Y+RL+EYPFSSEQKMMAV+C PK G + +F+ L
Sbjct: 455 IAVAMKYGMYGVADRYLRLQEYPFSSEQKMMAVKCTPKYGEN---KQEIYFVKGAL---- 507
Query: 125 VCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG 184
D +L T+ Y++N
Sbjct: 508 ---------DKILPLCTK------------YSMNGQV----------------------- 523
Query: 185 HNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRE 244
H+L K+D + + +E G ++ +ARG++LQDL Y+GLVGICDPPRPHVRE
Sbjct: 524 HSLNQKKDEEFL-----TEAYDVGQQGLRVIGLARGTSLQDLMYVGLVGICDPPRPHVRE 578
Query: 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304
++TL+ SGVKVK+VTGD +ETA+AIASM+GLD +H +++SGD+ID M+EHQL+Q +NSV
Sbjct: 579 SITTLINSGVKVKMVTGDAKETASAIASMIGLDVLHSRLISGDEIDLMSEHQLEQCINSV 638
Query: 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364
+VFYRVTP+HKL IVKA Q G IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAAD
Sbjct: 639 SVFYRVTPKHKLCIVKALQREGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAAD 698
Query: 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424
MILVDDDF TIIAAIEEGKGIF+NIRNFVRFQLSTSIAALSLIALATL+ IPNPLNAMQI
Sbjct: 699 MILVDDDFETIIAAIEEGKGIFHNIRNFVRFQLSTSIAALSLIALATLMGIPNPLNAMQI 758
Query: 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVF 484
LWINIIMDGPPAQSLGVEPVD DV QKPRN KEPMITR L++NVL+SA+III+GTL+V+
Sbjct: 759 LWINIIMDGPPAQSLGVEPVDKDVLKQKPRNTKEPMITRQLIINVLLSATIIIIGTLWVY 818
Query: 485 KREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVG 544
EM+ + + RDTTMTFTCFVFFDMFNALSCRSQ KS+FTIGLF+NKMFL AV SV+G
Sbjct: 819 NNEMTTDGNTARDTTMTFTCFVFFDMFNALSCRSQTKSIFTIGLFSNKMFLVAVTLSVIG 878
Query: 545 QLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICE--RKCLRSSKK 602
Q+ VIYFPPLQ+VFQTEAL+ DI L +TS+VF +SEIKK IER R R K
Sbjct: 879 QMLVIYFPPLQRVFQTEALSAVDILVLVGITSSVFIISEIKKLIERQLYNLRAGTRYYNK 938
Query: 603 QSMDFV 608
MDFV
Sbjct: 939 SEMDFV 944
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383848721|ref|XP_003699996.1| PREDICTED: calcium-transporting ATPase type 2C member 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/524 (67%), Positives = 414/524 (79%), Gaps = 35/524 (6%)
Query: 116 LHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKM 175
+ +LEV CVCNNA I D+LLGQPTEGALLA MK+G+Y V + Y+RL+EYPFSSEQKM
Sbjct: 422 ISNMLEVACVCNNAIIQNDTLLGQPTEGALLALTMKYGMYGVADKYLRLQEYPFSSEQKM 481
Query: 176 MAVR-VHKIGHN--------------LP--------------SKRDGKMILSQSCSEYPK 206
MAV+ K G N LP S++ + L+Q+ Y
Sbjct: 482 MAVKCAPKYGENRQEVYFIKGAVEKILPLCTKYYVNGQVCPLSEKKDEEFLTQA---YDI 538
Query: 207 FQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQET 266
Q G ++ +ARG++LQDL Y+GLVGICDPPRPHVRE ++TL+ SGVKVK+VTGD +ET
Sbjct: 539 GQQ-GLRVIGLARGTSLQDLAYVGLVGICDPPRPHVRESITTLINSGVKVKMVTGDAKET 597
Query: 267 ATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANG 326
A+AIASM+GLD +H +V+SGD+ID M+EHQL+Q +N+V+VFYRVTP+HKL IVKA Q G
Sbjct: 598 ASAIASMIGLDVLHSRVISGDEIDLMSEHQLEQCINNVSVFYRVTPKHKLCIVKALQREG 657
Query: 327 VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIF 386
IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAADMILVDDDF IIAAIEEGKGIF
Sbjct: 658 NIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAADMILVDDDFGAIIAAIEEGKGIF 717
Query: 387 YNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDD 446
+NIRNFVRFQLSTSIAALSLIALATL+ IPNPLNAMQILWINIIMDGPPAQSLGVEPVD
Sbjct: 718 HNIRNFVRFQLSTSIAALSLIALATLMGIPNPLNAMQILWINIIMDGPPAQSLGVEPVDK 777
Query: 447 DVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTCFV 506
DV QKPRN KEPMITR L+VNVL+SA III+GTL+V+ REM+ + + RDTTMTFTCFV
Sbjct: 778 DVLKQKPRNTKEPMITRHLIVNVLLSAIIIILGTLWVYNREMTTDGSTARDTTMTFTCFV 837
Query: 507 FFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTIN 566
FFDMFNALSCRSQ KS+FTIGL++NKMFL AV SV+GQ+ VIYFPPLQ+VFQTEAL+
Sbjct: 838 FFDMFNALSCRSQTKSIFTIGLWSNKMFLVAVTLSVIGQMLVIYFPPLQRVFQTEALSAK 897
Query: 567 DIAFLTALTSTVFFVSEIKKAIERICERK--CLRSSKKQSMDFV 608
DI FL ALTS+VF +SEIKK IER R+ + K MDFV
Sbjct: 898 DILFLVALTSSVFVISEIKKFIERQLYRRRAGTQYYNKSEMDFV 941
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350396138|ref|XP_003484455.1| PREDICTED: calcium-transporting ATPase type 2C member 1-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/586 (61%), Positives = 429/586 (73%), Gaps = 66/586 (11%)
Query: 15 FLEKVHGDGRNSS---RIR-------SKPETGTLLEVGCVCNNASIIGDSLLGQPTEGAL 64
++ V G G N RIR ++ +LEVGCVCNNA + D+LLGQPTEGAL
Sbjct: 395 YIADVTGAGYNDKGEVRIRKCDNMDLARTAISNMLEVGCVCNNAILQNDTLLGQPTEGAL 454
Query: 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGC 124
+A MK+G+Y V + Y+RL+EYPFSSEQKMMAV+C PK G + +F+ L
Sbjct: 455 IAVAMKYGMYGVADRYLRLQEYPFSSEQKMMAVKCTPKYGEN---KQEIYFVKGAL---- 507
Query: 125 VCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG 184
D +L T+ Y++N
Sbjct: 508 ---------DKILPLCTK------------YSMNGQV----------------------- 523
Query: 185 HNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRE 244
H+L K+D + + +E G ++ +ARG++LQDL Y+GLVGICDPPRPHVRE
Sbjct: 524 HSLNQKKDEEFL-----TEAYDVGQQGLRVIGLARGTSLQDLMYVGLVGICDPPRPHVRE 578
Query: 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304
++TL+ SGVKVK+VTGD +ETA+AIASM+GLD +H +++SGD+ID M+EHQL+Q +NSV
Sbjct: 579 SITTLINSGVKVKMVTGDAKETASAIASMIGLDVLHSRLISGDEIDLMSEHQLEQCINSV 638
Query: 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364
+VFYRVTP+HKL IVKA Q G IVGMTGDGVNDGVALKKADIGIAMGK GTDVCKEAAD
Sbjct: 639 SVFYRVTPKHKLCIVKALQREGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAAD 698
Query: 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424
MILVDDDF TIIAAIEEGKGIF+NIRNFVRFQLSTSIAALSLIALATL+ IPNPLNAMQI
Sbjct: 699 MILVDDDFETIIAAIEEGKGIFHNIRNFVRFQLSTSIAALSLIALATLMGIPNPLNAMQI 758
Query: 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVF 484
LWINIIMDGPPAQSLGVEPVD DV QKPRN KEPMITR L++NVL+SA+III+GTL+V+
Sbjct: 759 LWINIIMDGPPAQSLGVEPVDKDVLKQKPRNTKEPMITRQLIINVLLSATIIIIGTLWVY 818
Query: 485 KREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVG 544
EM+ + + RDTTMTFTCFVFFDMFNALSCRSQ KS+FTIGLF+NKMFL AV SV+G
Sbjct: 819 NNEMTTDGNTARDTTMTFTCFVFFDMFNALSCRSQTKSIFTIGLFSNKMFLVAVTLSVIG 878
Query: 545 QLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIER 590
Q+ VIYFPPLQ+VFQTEAL+ DI L +TS+VF +SEIKK IER
Sbjct: 879 QMLVIYFPPLQRVFQTEALSAVDILVLVGITSSVFIISEIKKLIER 924
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 608 | ||||||
| FB|FBgn0052451 | 1034 | SPoCk "Secretory Pathway Calci | 0.649 | 0.382 | 0.705 | 1.1e-168 | |
| UNIPROTKB|E1BXM8 | 921 | ATP2C1 "Uncharacterized protei | 0.654 | 0.432 | 0.599 | 1.8e-144 | |
| UNIPROTKB|E2QTW8 | 949 | ATP2C1 "Uncharacterized protei | 0.644 | 0.413 | 0.607 | 1e-143 | |
| UNIPROTKB|P57709 | 953 | ATP2C1 "Calcium-transporting A | 0.675 | 0.431 | 0.582 | 1.6e-143 | |
| MGI|MGI:1889008 | 918 | Atp2c1 "ATPase, Ca++-sequester | 0.666 | 0.441 | 0.588 | 2.6e-143 | |
| UNIPROTKB|Q5R5K5 | 918 | ATP2C1 "Calcium-transporting A | 0.644 | 0.427 | 0.604 | 3.4e-143 | |
| UNIPROTKB|F1RSA2 | 919 | ATP2C1 "Uncharacterized protei | 0.675 | 0.447 | 0.577 | 4.3e-143 | |
| UNIPROTKB|F1M281 | 886 | Atp2c1 "Calcium-transporting A | 0.666 | 0.457 | 0.587 | 5.5e-143 | |
| UNIPROTKB|E7ERC6 | 894 | ATP2C1 "Calcium-transporting A | 0.644 | 0.438 | 0.602 | 5.5e-143 | |
| UNIPROTKB|H0Y9V7 | 903 | ATP2C1 "Calcium-transporting A | 0.644 | 0.434 | 0.602 | 5.5e-143 |
| FB|FBgn0052451 SPoCk "Secretory Pathway Calcium atpase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1420 (504.9 bits), Expect = 1.1e-168, Sum P(2) = 1.1e-168
Identities = 283/401 (70%), Positives = 328/401 (81%)
Query: 212 KGL--VAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATA 269
KGL +A+A+G ++QDL Y GLVGI DPPRP VRE + L+QSGV+VK+VTGD QETA A
Sbjct: 636 KGLRVLALAKGRSMQDLIYCGLVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALA 695
Query: 270 IASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIV 329
IA+++G+DTIH + LSG ++DQM EHQL +V N+V+VFYRV+PRHKL IVK+ Q +G IV
Sbjct: 696 IANLIGIDTIHHQTLSGQEMDQMNEHQLDKVANNVSVFYRVSPRHKLEIVKSLQRSGNIV 755
Query: 330 GMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNI 389
GMTGDGVNDGVALKKADIGIAMGK GTDVCKEAADMILV+DDF+TIIAAIEEGKGIFYNI
Sbjct: 756 GMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNI 815
Query: 390 RNFVRFQXXXXXXXXXXXXXXXXXRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVK 449
RNFVRFQ I NPLNAMQILWINIIMDGPPAQSLGVEPVD DV
Sbjct: 816 RNFVRFQLSTSIAALALIALATLMDIANPLNAMQILWINIIMDGPPAQSLGVEPVDHDVL 875
Query: 450 IQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIV--SKRDTTMTFTCFVF 507
QKPRNVK+PMIT+++VVNVL+SASII++GTL+VF+REM+D + +KRDTTMTFTCFVF
Sbjct: 876 KQKPRNVKQPMITKSVVVNVLLSASIIVLGTLWVFQREMADGTLGKTKRDTTMTFTCFVF 935
Query: 508 FDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTIND 567
FDMFNALSCRSQ KSVFTIGL TN+MFL AV S++GQ+ V+YFPPLQ VFQTEALT D
Sbjct: 936 FDMFNALSCRSQTKSVFTIGLTTNRMFLLAVAFSIIGQMLVVYFPPLQMVFQTEALTPYD 995
Query: 568 IAFLTALTSTVFFVSEIKKAIERICERKCLRSSKKQSMDFV 608
I FL +LTS+V VSEIKK ER ERK S + +DFV
Sbjct: 996 IFFLVSLTSSVLVVSEIKKWFERTMERKMY--STRSELDFV 1034
|
|
| UNIPROTKB|E1BXM8 ATP2C1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1221 (434.9 bits), Expect = 1.8e-144, Sum P(2) = 1.8e-144
Identities = 242/404 (59%), Positives = 305/404 (75%)
Query: 196 ILSQSCSEYPKFQT-LGK-GL--VAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQ 251
++ Q +Y + +T +G GL +A+A G L + ++GLVGI DPPR V+E ++TL+
Sbjct: 502 LVQQQREQYQQEKTSMGSAGLRVLALASGPELGQMTFLGLVGIIDPPRTGVKEAVTTLIM 561
Query: 252 SGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVT 311
SGV +K++TGD QETA AIAS +GL + + + +SG++ID + QL Q+ V VFYR +
Sbjct: 562 SGVAIKMITGDSQETAVAIASRLGLYSKNSQAISGEEIDDLDIQQLSQITPKVAVFYRAS 621
Query: 312 PRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD 371
PRHKL I+K+ Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDD
Sbjct: 622 PRHKLKIIKSLQNNGAVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDD 681
Query: 372 FNTIIAAIEEGKGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLNAMQILWINIIM 431
F TI++AIEEGKGI+ NI+NFVRFQ PNPLNAMQILWINIIM
Sbjct: 682 FQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIM 741
Query: 432 DGPPAQSLGVEPVDDDVKIQKP-RNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSD 490
DGPPAQSLGVEPVD DV IQKP RN+K+ ++T+ L+V +L+S+ II+ GTL+VF RE+ D
Sbjct: 742 DGPPAQSLGVEPVDKDV-IQKPPRNLKDSILTKNLIVKILVSSIIIVCGTLFVFWRELRD 800
Query: 491 NIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIY 550
N+++ RDTTMTFTCFVFFDMFNALS RSQ KSVF IGL +NKMF +AV S++GQL VIY
Sbjct: 801 NVITPRDTTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIY 860
Query: 551 FPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICER 594
FPPLQKVFQTE+L++ D+ FL LTS+V V+EI K ER E+
Sbjct: 861 FPPLQKVFQTESLSVLDLLFLLGLTSSVCIVTEIIKKFERSKEK 904
|
|
| UNIPROTKB|E2QTW8 ATP2C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1218 (433.8 bits), Expect = 1.0e-143, Sum P(2) = 1.0e-143
Identities = 238/392 (60%), Positives = 296/392 (75%)
Query: 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGD 262
E + + G ++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD
Sbjct: 513 EKARMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGD 572
Query: 263 GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAF 322
QETA AIAS +GL + + +SG++ID M QL Q+V V VFYR +PRHK+ I+K+
Sbjct: 573 SQETAVAIASRLGLYSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSL 632
Query: 323 QANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382
Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEG
Sbjct: 633 QKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEG 692
Query: 383 KGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLNAMQILWINIIMDGPPAQSLGVE 442
KGI+ NI+NFVRFQ PNPLNAMQILWINIIMDGPPAQSLGVE
Sbjct: 693 KGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVE 752
Query: 443 PVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTF 502
PVD DV + PRN K+ ++TR L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTF
Sbjct: 753 PVDKDVIRKPPRNWKDSILTRNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTF 812
Query: 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562
TCFVFFDMFNALS RSQ KSVF IGL +NKMF +AV S++GQL VIYFPPLQKVFQTE+
Sbjct: 813 TCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTES 872
Query: 563 LTINDIAFLTALTSTVFFVSEIKKAIERICER 594
L+I D+ FL LTS+V V+EI K +ER E+
Sbjct: 873 LSILDLLFLVGLTSSVCVVAEIIKKVERSREK 904
|
|
| UNIPROTKB|P57709 ATP2C1 "Calcium-transporting ATPase type 2C member 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1216 (433.1 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 241/414 (58%), Positives = 303/414 (73%)
Query: 181 HKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRP 240
H G L + + + Q E + + G ++A+A G L L ++GLVGI DPPR
Sbjct: 528 HSKGQTLTLTQQQRDLYQQ---EKAQMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRT 584
Query: 241 HVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQV 300
V+E ++TL+ SGV +K++TGD QETA AIAS +GL + + +SG++ID M QL Q+
Sbjct: 585 GVKEAVTTLIASGVSIKMITGDSQETAVAIASRLGLYSKTSQSVSGEEIDAMDVQQLSQI 644
Query: 301 VNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCK 360
V V VFYR +PRHK+ I+K+ Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCK
Sbjct: 645 VPKVAVFYRASPRHKMKIIKSLQKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCK 704
Query: 361 EAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLN 420
EAADMILVDDDF TI++AIEEGKGI+ NI+NFVRFQ PNPLN
Sbjct: 705 EAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLN 764
Query: 421 AMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGT 480
AMQILWINIIMDGPPAQSLGVEPVD DV + PRN K+ ++T+ L++ +L+S+ II+ GT
Sbjct: 765 AMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGT 824
Query: 481 LYVFKREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCA 540
L+VF RE+ DN+++ RDTTMTFTCFVFFDMFNALS RSQ KSVF IGL +NKMF +AV
Sbjct: 825 LFVFWRELRDNVITPRDTTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLG 884
Query: 541 SVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICER 594
S++GQL VIYFPPLQKVFQTE+L+I D+ FL LTS+V V+EI K +ER E+
Sbjct: 885 SIMGQLLVIYFPPLQKVFQTESLSILDLLFLLGLTSSVCIVAEIIKKVERSREK 938
|
|
| MGI|MGI:1889008 Atp2c1 "ATPase, Ca++-sequestering" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1215 (432.8 bits), Expect = 2.6e-143, Sum P(2) = 2.6e-143
Identities = 239/406 (58%), Positives = 301/406 (74%)
Query: 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGD 262
E + + G ++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD
Sbjct: 512 EKARMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGD 571
Query: 263 GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAF 322
QETA AIAS +GL + + +SG+++D M L Q+V V VFYR +PRHK+ I+K+
Sbjct: 572 SQETAIAIASRLGLYSKTSQSVSGEEVDTMEVQHLSQIVPKVAVFYRASPRHKMKIIKSL 631
Query: 323 QANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382
Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEG
Sbjct: 632 QKNGAVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEG 691
Query: 383 KGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLNAMQILWINIIMDGPPAQSLGVE 442
KGI+ NI+NFVRFQ PNPLNAMQILWINIIMDGPPAQSLGVE
Sbjct: 692 KGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVE 751
Query: 443 PVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTF 502
PVD DV + PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTF
Sbjct: 752 PVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTF 811
Query: 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562
TCFVFFDMFNALS RSQ KSVF IGL +NKMF +AV S++GQL VIYFPPLQKVFQTE+
Sbjct: 812 TCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTES 871
Query: 563 LTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRSSKKQSMDFV 608
L+I D+ FL LTS+V VSEI K +ER E K +++ S F+
Sbjct: 872 LSILDLLFLLGLTSSVCIVSEIIKKVERSRE-KVQKNAGSASSSFL 916
|
|
| UNIPROTKB|Q5R5K5 ATP2C1 "Calcium-transporting ATPase type 2C member 1" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 1214 (432.4 bits), Expect = 3.4e-143, Sum P(2) = 3.4e-143
Identities = 237/392 (60%), Positives = 296/392 (75%)
Query: 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGD 262
E + + G ++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD
Sbjct: 512 EKARMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGD 571
Query: 263 GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAF 322
QETA AIAS +GL + + +SG++ID M QL Q+V V VFYR +PRHK+ I+K+
Sbjct: 572 SQETAIAIASRLGLYSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSL 631
Query: 323 QANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382
Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEG
Sbjct: 632 QKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEG 691
Query: 383 KGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLNAMQILWINIIMDGPPAQSLGVE 442
KGI+ NI+NFVRFQ PNPLNAMQILWINIIMDGPPAQSLGVE
Sbjct: 692 KGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVE 751
Query: 443 PVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTF 502
PVD DV + PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTF
Sbjct: 752 PVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTF 811
Query: 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562
TCFVFFDMFNALS RSQ KSVF IGL +NKMF +AV S++GQL VIYFPPLQKVFQTE+
Sbjct: 812 TCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTES 871
Query: 563 LTINDIAFLTALTSTVFFVSEIKKAIERICER 594
L+I D+ FL LTS+V V+EI K +ER E+
Sbjct: 872 LSILDLLFLLGLTSSVCIVAEIIKKVERSREK 903
|
|
| UNIPROTKB|F1RSA2 ATP2C1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1212 (431.7 bits), Expect = 4.3e-143, Sum P(2) = 4.3e-143
Identities = 239/414 (57%), Positives = 303/414 (73%)
Query: 181 HKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRP 240
H G L + + + Q E + + G ++A+A G L L ++GLVGI DPPR
Sbjct: 494 HNKGQTLTLTQQQRDLYQQ---EKAQMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRT 550
Query: 241 HVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQV 300
V+E ++TL+ SGV +K++TGD QETA AIAS +GL + + +SG++ID M QL Q+
Sbjct: 551 GVKEAVTTLIASGVSIKMITGDSQETAVAIASRLGLYSKTSQSVSGEEIDAMDVQQLSQI 610
Query: 301 VNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCK 360
+ V VFYR +PRHK+ I+K+ Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCK
Sbjct: 611 LPKVAVFYRASPRHKMKIIKSLQKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCK 670
Query: 361 EAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLN 420
EAADMILVDDDF TI++AIEEGKGI+ NI+NFVRFQ PNPLN
Sbjct: 671 EAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLN 730
Query: 421 AMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGT 480
AMQILWINIIMDGPPAQSLGVEPVD DV + PRN K+ ++T+ L++ +L+S+ II+ GT
Sbjct: 731 AMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGT 790
Query: 481 LYVFKREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCA 540
L+VF RE+ DN+++ RDTTMTFTCFVFFDMFNALS RSQ KSVF IGL +NKMF +AV
Sbjct: 791 LFVFWRELRDNVITPRDTTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLG 850
Query: 541 SVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICER 594
S++GQL VIYFPPLQKVFQTE+L++ D+ FL LTS+V V+EI K +ER E+
Sbjct: 851 SIMGQLLVIYFPPLQKVFQTESLSVLDLLFLLGLTSSVCIVAEIIKKVERSREK 904
|
|
| UNIPROTKB|F1M281 Atp2c1 "Calcium-transporting ATPase type 2C member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1212 (431.7 bits), Expect = 5.5e-143, Sum P(2) = 5.5e-143
Identities = 239/407 (58%), Positives = 302/407 (74%)
Query: 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGD 262
E + + G ++A+A G +L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD
Sbjct: 476 EKAQMGSAGLRVLALASGPDLGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGD 535
Query: 263 GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAF 322
QETA AIAS +GL + + +SG+++D M L Q+V V VFYR +PRHK+ I+K+
Sbjct: 536 SQETAIAIASRLGLYSKTSQSVSGEEVDTMEVQHLSQIVPKVAVFYRASPRHKMKIIKSL 595
Query: 323 QANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382
Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEG
Sbjct: 596 QKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEG 655
Query: 383 KGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLNAMQILWINIIMDGPPAQSLGVE 442
KGI+ NI+NFVRFQ PNPLNAMQILWINIIMDGPPAQSLGVE
Sbjct: 656 KGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVE 715
Query: 443 PVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTF 502
PVD DV + PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTF
Sbjct: 716 PVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTF 775
Query: 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562
TCFVFFDMFNALS RSQ KSVF IGL +NKMF +AV S++GQL VIYFPPLQKVFQTE+
Sbjct: 776 TCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTES 835
Query: 563 LTINDIAFLTALTSTVFFVSEIKKAIERICER--KCLRSSKKQSMDF 607
L+I D+ FL LTS+V VSEI K +ER E+ K S+ ++F
Sbjct: 836 LSILDLLFLLGLTSSVCIVSEIIKKVERSREKTQKNATSTPSSFLEF 882
|
|
| UNIPROTKB|E7ERC6 ATP2C1 "Calcium-transporting ATPase type 2C member 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1212 (431.7 bits), Expect = 5.5e-143, Sum P(2) = 5.5e-143
Identities = 236/392 (60%), Positives = 296/392 (75%)
Query: 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGD 262
E + + G ++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD
Sbjct: 458 EKARMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGD 517
Query: 263 GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAF 322
QETA AIAS +GL + + +SG++ID M QL Q+V V VFYR +PRHK+ I+K+
Sbjct: 518 SQETAVAIASRLGLYSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSL 577
Query: 323 QANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382
Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEG
Sbjct: 578 QKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEG 637
Query: 383 KGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLNAMQILWINIIMDGPPAQSLGVE 442
KGI+ NI+NFVRFQ PNPLNAMQILWINIIMDGPPAQSLGVE
Sbjct: 638 KGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVE 697
Query: 443 PVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTF 502
PVD DV + PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTF
Sbjct: 698 PVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTF 757
Query: 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562
TCFVFFDMFNALS RSQ KSVF IGL +N+MF +AV S++GQL VIYFPPLQKVFQTE+
Sbjct: 758 TCFVFFDMFNALSSRSQTKSVFEIGLCSNRMFCYAVLGSIMGQLLVIYFPPLQKVFQTES 817
Query: 563 LTINDIAFLTALTSTVFFVSEIKKAIERICER 594
L+I D+ FL LTS+V V+EI K +ER E+
Sbjct: 818 LSILDLLFLLGLTSSVCIVAEIIKKVERSREK 849
|
|
| UNIPROTKB|H0Y9V7 ATP2C1 "Calcium-transporting ATPase type 2C member 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1212 (431.7 bits), Expect = 5.5e-143, Sum P(2) = 5.5e-143
Identities = 236/392 (60%), Positives = 296/392 (75%)
Query: 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGD 262
E + + G ++A+A G L L ++GLVGI DPPR V+E ++TL+ SGV +K++TGD
Sbjct: 467 EKARMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGD 526
Query: 263 GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAF 322
QETA AIAS +GL + + +SG++ID M QL Q+V V VFYR +PRHK+ I+K+
Sbjct: 527 SQETAVAIASRLGLYSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSL 586
Query: 323 QANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382
Q NG +V MTGDGVND VALK ADIG+AMG+ GTDVCKEAADMILVDDDF TI++AIEEG
Sbjct: 587 QKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEG 646
Query: 383 KGIFYNIRNFVRFQXXXXXXXXXXXXXXXXXRIPNPLNAMQILWINIIMDGPPAQSLGVE 442
KGI+ NI+NFVRFQ PNPLNAMQILWINIIMDGPPAQSLGVE
Sbjct: 647 KGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVE 706
Query: 443 PVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTF 502
PVD DV + PRN K+ ++T+ L++ +L+S+ II+ GTL+VF RE+ DN+++ RDTTMTF
Sbjct: 707 PVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTF 766
Query: 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562
TCFVFFDMFNALS RSQ KSVF IGL +N+MF +AV S++GQL VIYFPPLQKVFQTE+
Sbjct: 767 TCFVFFDMFNALSSRSQTKSVFEIGLCSNRMFCYAVLGSIMGQLLVIYFPPLQKVFQTES 826
Query: 563 LTINDIAFLTALTSTVFFVSEIKKAIERICER 594
L+I D+ FL LTS+V V+EI K +ER E+
Sbjct: 827 LSILDLLFLLGLTSSVCIVAEIIKKVERSREK 858
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q80XR2 | AT2C1_MOUSE | 3, ., 6, ., 3, ., 8 | 0.5833 | 0.7878 | 0.5217 | yes | N/A |
| P98194 | AT2C1_HUMAN | 3, ., 6, ., 3, ., 8 | 0.5813 | 0.7878 | 0.5212 | yes | N/A |
| Q64566 | AT2C1_RAT | 3, ., 6, ., 3, ., 8 | 0.5833 | 0.7878 | 0.5212 | yes | N/A |
| Q5R5K5 | AT2C1_PONAB | 3, ., 6, ., 3, ., 8 | 0.5864 | 0.7878 | 0.5217 | yes | N/A |
| P57709 | AT2C1_BOVIN | 3, ., 6, ., 3, ., 8 | 0.5833 | 0.7878 | 0.5026 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 608 | |||
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-123 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-90 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 7e-66 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 8e-53 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 6e-51 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 1e-49 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-47 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 9e-36 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-33 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-32 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-31 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-30 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 5e-27 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-23 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-18 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-18 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 8e-17 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-16 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 9e-14 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 2e-13 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 4e-12 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-10 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-10 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 4e-08 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-07 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-05 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 632 bits (1631), Expect = 0.0
Identities = 276/502 (54%), Positives = 350/502 (69%), Gaps = 28/502 (5%)
Query: 116 LHRLLEVGCVCNNASII--GDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQ 173
+ R+LE G +CNNA D+LLG PT+ AL+ MKFGL + E Y+R+ E PFSSE+
Sbjct: 381 VSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSER 440
Query: 174 KMMAVRVHKIGHNLPS---KRDGKMILSQSCSEYPK--------------------FQTL 210
K MAV+ K + +L C+ Y K +
Sbjct: 441 KWMAVKCVHRQDRSEMCFMKGAYEQVLK-YCTYYQKKDGKTLTLTQQQRDVIQEEAAEMA 499
Query: 211 GKGL--VAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT 268
GL +A A G L ++GLVGI DPPRP V+E ++TL+ GV++ ++TGD QETA
Sbjct: 500 SAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAV 559
Query: 269 AIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVI 328
+IA +G+ + + +SG+++D M + QL Q+V V VF R +P HK+ IVKA Q G +
Sbjct: 560 SIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDV 619
Query: 329 VGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYN 388
V MTGDGVND ALK ADIG+AMG+ GTDV KEAADMIL DDDF TI++AIEEGKGIF N
Sbjct: 620 VAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNN 679
Query: 389 IRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDV 448
I+NF+ FQLSTS+AALSLIALATL+ PNPLNAMQILWINI+MDGPPAQSLGVEPVD DV
Sbjct: 680 IKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDV 739
Query: 449 KIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTMTFTCFVFF 508
+ PR + ++T+ L+ +L+SA II+VGTL+VF REM D +++ RDTTMTFTCFVFF
Sbjct: 740 MRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITARDTTMTFTCFVFF 799
Query: 509 DMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDI 568
DMFNAL+CRSQ KSVF IG F+N+MF +AV S++GQL VIYFPPLQ VFQTEAL+I D+
Sbjct: 800 DMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDL 859
Query: 569 AFLTALTSTVFFVSEIKKAIER 590
FL +TS+V V EI+K +ER
Sbjct: 860 LFLLLITSSVCIVDEIRKKVER 881
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 385 bits (990), Expect = e-123
Identities = 174/561 (31%), Positives = 274/561 (48%), Gaps = 71/561 (12%)
Query: 93 KMMAVRCIPKEGSSCDVDTRFFF----LHRLLEVGCVCNNASI--IGDSLLGQPTEGALL 146
KM + G D+D + L R L +CN+ + G G PTEGAL+
Sbjct: 363 KMTVKKIYINGGGK-DIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALV 421
Query: 147 AAGMKFG----LYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMI------ 196
K G L + Y L E PF SE+K M+V + K + ++
Sbjct: 422 EFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSV-IVK------TDEGKYILFVKGAP 474
Query: 197 --LSQSCSEYPKFQTL----------------GKGLVAMARGSNL--------------Q 224
+ + C + + L +GL +A
Sbjct: 475 EVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIES 534
Query: 225 DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL--DTIHGK 282
DL ++GL GI DPPR V+E + L ++G+KV ++TGD ETA AIA G+ +
Sbjct: 535 DLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESAL 594
Query: 283 VLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVAL 342
V+ G ++D +++ +L ++V ++VF RV+P K IV+A Q +G +V MTGDGVND AL
Sbjct: 595 VIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPAL 654
Query: 343 KKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIA 402
K AD+GIAMG +GTD KEAAD++L+DD+F TI+ A+ EG+ ++ NI+ F+ + LS ++
Sbjct: 655 KAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVG 714
Query: 403 ALSLIALATLLRIPN-PLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMI 461
+ + + +L + PL +Q+LWIN++ D PA +LGVE + DV + PR +E +
Sbjct: 715 EVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLF 774
Query: 462 TRALVVNVLMSASIIIV----GTLYVFKREMSDN-----IVSKRDTTMTFTCFVFFDMFN 512
R + ++ ++ T ++ N + T FT V +
Sbjct: 775 NRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLL 834
Query: 513 ALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQ-KVFQTEALTIND--IA 569
L+ RS+ + + LF+NK A+ ++ QL +I+ PPL K+FQ L++ + IA
Sbjct: 835 TLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIA 894
Query: 570 FLTALTSTVFFVSEIKKAIER 590
AL VSE+ K R
Sbjct: 895 IAVALLLLYIVVSELYKLKSR 915
|
Length = 917 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 299 bits (766), Expect = 2e-90
Identities = 173/568 (30%), Positives = 268/568 (47%), Gaps = 94/568 (16%)
Query: 116 LHRLLEVGCVCNNASIIGDSL------LGQPTEGALLAAGMKFGLYA------------- 156
L L + +CN++S+ + +G+ TE AL K GL A
Sbjct: 351 LEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPAL 410
Query: 157 -----VNEHYVRLKEYPFSSEQKMMAVRVH-KIGHNLPSK-------RDGKMILSQSCSE 203
N+ + +L FS ++K M+V G+ L K IL+
Sbjct: 411 GCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRA 470
Query: 204 YP-----KFQTL--------GKGL--VAMARGSNLQ------------------DLCYMG 230
P K L K L +A+A DL ++G
Sbjct: 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIG 530
Query: 231 LVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL----DTIHGKVLSG 286
+VG+ DPPRP V + + +G++V ++TGD +ETA AI +G+ + + K +G
Sbjct: 531 VVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTG 590
Query: 287 DQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKAD 346
+ D+M + + S +F RV P HK +V+ Q G IV MTGDGVND ALKKAD
Sbjct: 591 REFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKAD 650
Query: 347 IGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSL 406
IGIAMG GT+V KEA+DM+L DD+F TI+AA+EEG+ I+ N++ F+R+ +S++I +
Sbjct: 651 IGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVC 709
Query: 407 IALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALV 466
I L L IP L +Q+LW+N++ DG PA +LG P D D+ + PR EP+IT L
Sbjct: 710 IFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLF 769
Query: 467 VNVLMSASIIIVGTLYVF---------KREMSDNIVSKRD---------------TTMTF 502
L+ + + T+ F D+ + D T++
Sbjct: 770 FRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISL 829
Query: 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562
+ V +MFNAL+ S+ +S+ + + NK + A+C S+ ++Y P L ++F
Sbjct: 830 SVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTP 889
Query: 563 LTINDIAFLTALTSTVFFVSEIKKAIER 590
L++ D + L+ V V E+ K R
Sbjct: 890 LSLTDWLMVLKLSLPVILVDEVLKFFSR 917
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 231 bits (592), Expect = 7e-66
Identities = 145/476 (30%), Positives = 239/476 (50%), Gaps = 50/476 (10%)
Query: 137 LGQPTEGALLAAGMKFG---LYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDG 193
+G TE ALL G+ E V +K YPF+SE+K M+V V G R G
Sbjct: 446 IGSKTECALLDFGLLLLRDYQEVRAEEKV-VKIYPFNSERKFMSVVVKHSGGKYREFRKG 504
Query: 194 -KMILSQSCSEY---------------PKFQTLGKGLVAMA-RGSNL--QDLCY------ 228
I+ + C + + + + L + A R L +D
Sbjct: 505 ASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK 564
Query: 229 ---------MGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI 279
+G+VGI DP RP VRE + ++G+ V++VTGD +TA AIA G+ T
Sbjct: 565 DYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF 624
Query: 280 HGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDG 339
G + G + + ++ ++ + V R +P K +V + G +V +TGDG ND
Sbjct: 625 GGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDA 684
Query: 340 VALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLST 399
ALK AD+G +MG GT+V KEA+D+IL+DD+F +I+ A++ G+ ++ NIR F++FQL+
Sbjct: 685 PALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTV 744
Query: 400 SIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEP 459
++ A+ L + + + +PL A+Q+LW+N+IMD A +L EP + + +KP P
Sbjct: 745 NVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAP 804
Query: 460 MITRALVVNVLMSAS--IIIVGTLY-----VFKREMSDNIVSKRDT---TMTFTCFVFFD 509
+I+R++ N+L A +++ L +F D I S + T+ F FV
Sbjct: 805 LISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQ 864
Query: 510 MFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTI 565
+FN ++ R + GLF N++F+ + + Q+ ++ F F T +L+I
Sbjct: 865 LFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF--GGSFFSTVSLSI 918
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 8e-53
Identities = 132/436 (30%), Positives = 210/436 (48%), Gaps = 69/436 (15%)
Query: 223 LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVG------- 275
+LC++GL+ + DPPR V + + +G+KV +VTGD TA AIA VG
Sbjct: 554 TDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 613
Query: 276 ------------LDTIHGK-----VLSGDQIDQMTEHQLQQVVNSVT--VFYRVTPRHKL 316
+ ++ + V+ G + MT QL +++ T VF R +P+ KL
Sbjct: 614 TVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKL 673
Query: 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTII 376
IV+ Q G IV +TGDGVND ALKKADIG+AMG G+DV K+AADMIL+DD+F +I+
Sbjct: 674 IIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIV 733
Query: 377 AAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPA 436
+EEG+ IF N++ + + L+++I ++ + + IP PL + IL I++ D PA
Sbjct: 734 TGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPA 793
Query: 437 QSLGVEPVDDDVKIQKPRN------VKEPMITRA-------------LVVNVLMSASIII 477
SL E + D+ ++PRN V E +I+ A V+++ + +
Sbjct: 794 ISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFL 853
Query: 478 VGTLYVFKREMSDNIVS------------KRDTTMTFTCF-VFF------DMFNALSCRS 518
L + + D ++ ++ + FTC FF + + C++
Sbjct: 854 PLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKT 913
Query: 519 QIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTIN--DIAFLTALTS 576
+ SVF G NK+ +F + F+ Y P + + L AF +L
Sbjct: 914 RRNSVFQQG-MKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL-- 970
Query: 577 TVFFVSEIKKAIERIC 592
+F EI+K I R
Sbjct: 971 LIFVYDEIRKLIIRRN 986
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 184 bits (468), Expect = 6e-51
Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 40/304 (13%)
Query: 128 NASIIGDSLLGQPTEGALL-AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHN 186
+ + L G P E ALL +A + N+ Y L +PFSS K M+V V +
Sbjct: 274 LVACDNNYLSGDPMEKALLKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGS 333
Query: 187 LPSKRDG-----KMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPH 241
G + +Y + G ++A A DL ++GL+ DP RP
Sbjct: 334 DLLFVKGAPEFILERCNNYEEKYLELARQGLRVLAFASKELEDDLEFLGLITFEDPLRPD 393
Query: 242 VRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV 301
+E + L +G+KV ++TGD TA AIA +G+D
Sbjct: 394 AKETIEELKAAGIKVVMITGDNVLTAKAIAKELGID------------------------ 429
Query: 302 NSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKE 361
VF RV+P KL IV+A Q G IV MTGDGVND ALKKAD+GIAMG K
Sbjct: 430 ----VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------AKA 479
Query: 362 AADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNA 421
AAD++L+DDD + I+ A++EG+ IF NI++ + + ++ ++ + L L ++ + P+ A
Sbjct: 480 AADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLLPMLA 539
Query: 422 MQIL 425
L
Sbjct: 540 ALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 1e-49
Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Query: 416 PNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASI 475
P PL +QILWIN++ DG PA +LG EP + D+ + PR KEP+ +R L+ +L+ +
Sbjct: 1 PLPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLL 60
Query: 476 IIVGTLYVFKREMS--DNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKM 533
I + TL VF + S TM F V +FNAL+ RS +S+F IGLF+NK+
Sbjct: 61 IAIVTLLVFFLGLLGFGISESGLAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSNKL 120
Query: 534 FLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAI 588
L AV S++ QL +IY P LQ VF T L++ + L V V E++K +
Sbjct: 121 LLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRKLL 175
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 179 bits (454), Expect = 2e-47
Identities = 153/611 (25%), Positives = 248/611 (40%), Gaps = 133/611 (21%)
Query: 108 DVDTRFFFLHRLLEVGCVCNNASIIGDS------LLGQPTEGALLAAGMKFGL------- 154
D+D F +LLE + N A++ D G PTE A+ KF L
Sbjct: 441 DIDMDLF--IKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTG 498
Query: 155 --------------------YAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLP------ 188
+ + + E+PF SE K MA +++ H
Sbjct: 499 EEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMAS-IYEDNHGETYNIYAK 557
Query: 189 ----------SKRDGKMILSQSCSEYPKFQTLGKGLVAMA-------------------- 218
S +GK + S E + + + ++A
Sbjct: 558 GAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNN 617
Query: 219 ----------RGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT 268
R + DL ++GL+GI DPPR + Q+G+ V ++TGD ETA
Sbjct: 618 DDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAK 677
Query: 269 AIASMVGL----------DTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTI 318
AIA VG+ + + V++G Q D +++ ++ + V R P+ K+ +
Sbjct: 678 AIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKM 737
Query: 319 VKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAA 378
++A MTGDGVND +LK A++GIAMG G+DV K+A+D++L DD+F +I+ A
Sbjct: 738 IEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA 797
Query: 379 IEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPN-----PLNAMQILWINIIMDG 433
IEEG+ +F NI FV L+ ++A L+ + R N PL+ ++ILW +I
Sbjct: 798 IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSC 857
Query: 434 PPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREM----S 489
PA LG+E D+ + P + + + + L++++ + L F + S
Sbjct: 858 FPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGS 917
Query: 490 DNI---------VSKRD---------TTMTFTCFV-----------FFDMFNALSCRSQI 520
N+ D TMTF + FF++ S
Sbjct: 918 GNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNF 977
Query: 521 KSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPL-QKVFQTEALTINDIAFLTALTSTVF 579
K F + NK +A+ + V IY P + VF+ + + + A T F
Sbjct: 978 KEFFH-SIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFF 1035
Query: 580 FVSEIKKAIER 590
F +EI K +R
Sbjct: 1036 FGAEIWKCGKR 1046
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 9e-36
Identities = 77/231 (33%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 207 FQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQET 266
++ LG VA GL+ + DPPR +E + GV+VK+VTGD
Sbjct: 417 YRALG---VARTDEEGRWHFL--GLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAI 471
Query: 267 ATAIASMVGLDT--IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324
A A +GL T VL L ++V F V P HK IV+ Q
Sbjct: 472 AKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQK 531
Query: 325 NGVIVGMTGDGVNDGVALKKADIGIAMGKQG-TDVCKEAADMILVDDDFNTIIAAIEEGK 383
G +VGMTGDGVND ALKKAD+GIA+ G TD + AAD++L + + I+ AI E +
Sbjct: 532 RGHLVGMTGDGVNDAPALKKADVGIAV--AGATDAARSAADIVLTEPGLSVIVDAILESR 589
Query: 384 GIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGP 434
IF ++++V ++++ +I + L L+ + ++ I I+ DG
Sbjct: 590 KIFQRMKSYVIYRIAETIRIVFFFGLLILILNFY-FPPIMVVIIAILNDGT 639
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 2e-33
Identities = 79/234 (33%), Positives = 124/234 (52%), Gaps = 13/234 (5%)
Query: 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKV 283
DL G + DPP+ + L SGV VK++TGD + A + VGLD G+V
Sbjct: 537 SDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEV 594
Query: 284 LSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALK 343
L G I+ +++ +L + T+F R+TP HK IV + G +VG GDG+ND AL+
Sbjct: 595 LIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALR 654
Query: 344 KADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAA 403
ADIGI++ D+ +EAAD+IL++ + + EG+ F N+ +++ S++
Sbjct: 655 AADIGISV-DGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGN 713
Query: 404 L--SLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVD--DDVKIQKP 453
+ L+A A L + P+ + +L N++ D S P D DD +IQKP
Sbjct: 714 VFSVLVASAFLPFL--PMLPLHLLIQNLLYD----VSQVAIPFDNVDDEQIQKP 761
|
Length = 902 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 5e-32
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 206 KFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQE 265
++ GK +V +A L G++ + D RP +E ++ L G+KV ++TGD +
Sbjct: 511 ALESEGKTVVFVAVDGKLV-----GVIALADELRPDAKEAIAALKALGIKVVMLTGDNRR 565
Query: 266 TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN 325
TA AIA +G+D + ++L P K IV+ QA
Sbjct: 566 TAEAIAKELGIDEVRAELL---------------------------PEDKAEIVRELQAE 598
Query: 326 GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGI 385
G V M GDG+ND AL AD+GIAMG GTDV EAAD++L+ DD + + AI+ +
Sbjct: 599 GRKVAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRDDLSAVPEAIDLSRAT 657
Query: 386 FYNIR-NFVRFQLSTSIAALSLIALATLLRIPNPLNAM 422
I+ N + + A+ L A L P A
Sbjct: 658 RRIIKQNLF-WAFGYNAIAIPLAAGGLL----TPWIAA 690
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 7e-31
Identities = 77/215 (35%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 225 DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVL 284
DL G + DPP+ ++ L ++GV VK++TGD I VGL+ G+ L
Sbjct: 538 DLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPL 595
Query: 285 SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKK 344
G +I+ M + L + V TVF ++TP K ++KA QANG VG GDG+ND AL+
Sbjct: 596 LGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655
Query: 345 ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG--KG--IFYNIRNFVRFQLSTS 400
AD+GI++ G D+ KE+AD+IL++ + +EEG KG F NI ++ S++
Sbjct: 656 ADVGISV-DSGADIAKESADIILLEKS----LMVLEEGVIKGRETFGNIIKYLNMTASSN 710
Query: 401 IAAL--SLIALATLLRIP-NPLNAMQILWINIIMD 432
+ L+A A IP P+ A+ +L N++ D
Sbjct: 711 FGNVFSVLVASAF---IPFLPMLAIHLLLQNLMYD 742
|
Length = 903 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 2e-30
Identities = 69/245 (28%), Positives = 126/245 (51%), Gaps = 16/245 (6%)
Query: 218 ARGSNLQ-----DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS 272
++ L G +G DPP+ +E ++ L ++G+ VK++TGD + I
Sbjct: 491 VGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQ 550
Query: 273 MVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMT 332
VG+D L G I+++++ +L + + +F R+TP K I+ + G VG
Sbjct: 551 EVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFL 608
Query: 333 GDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNF 392
GDG+ND AL+KAD+GI++ D+ KEA+D+IL++ + + EG+ F NI +
Sbjct: 609 GDGINDAPALRKADVGISV-DTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKY 667
Query: 393 VRFQLSTSIAALSLIALATLLRIPN-PLNAMQILWINIIMDGPPAQSLGVEPVD--DDVK 449
++ S++ + + +A+ IP P+ ++ +L N++ D L + P D D
Sbjct: 668 LKMTASSNFGNVFSVLVASAF-IPFLPMLSLHLLIQNLLYD---FSQLTL-PWDKMDREF 722
Query: 450 IQKPR 454
++KP
Sbjct: 723 LKKPH 727
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 5e-27
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 39/213 (18%)
Query: 211 GKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGV-KVKLVTGDGQETATA 269
GK +V +A L G++ + D RP +E ++ L ++G K+ ++TGD + A A
Sbjct: 363 GKTVVFVAVDGELL-----GVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEA 417
Query: 270 IASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIV 329
+A+ +G+D +H ++L P KL IVK Q G +V
Sbjct: 418 VAAELGIDEVHAELL---------------------------PEDKLAIVKELQEEGGVV 450
Query: 330 GMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNI 389
M GDG+ND AL AD+GIAMG G+DV EAAD++L++DD +++ AI+ + I
Sbjct: 451 AMVGDGINDAPALAAADVGIAMGA-GSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRII 509
Query: 390 R-NFVRFQLSTSIAALSLIALATLLRIPNPLNA 421
+ N + + I LA +P L A
Sbjct: 510 KQNLA---WALGYNLV-AIPLAAGGLLPLWLLA 538
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 4e-25
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 33/207 (15%)
Query: 192 DGKMILSQSCSEYPKFQTLGKGLVAMARGS----NLQDLCYMGLVGICDPPRPHVRECMS 247
+G I + + G V G+ + G++ + D +P +E +
Sbjct: 365 EGHTIQLGNEKLLGENGLKTDGEVEEGGGTTSVLVAVNGELAGVLALADQLKPEAKEVIQ 424
Query: 248 TLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVF 307
L + G++ ++TGD ++TA A+A +G++ V
Sbjct: 425 ALKRRGIEPVMLTGDNRKTAKAVAKELGIEN---------------------------VR 457
Query: 308 YRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMIL 367
V P K ++K Q G +V M GDG+ND AL +AD+GIA+G GTDV EAAD++L
Sbjct: 458 AEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGA-GTDVAIEAADVVL 516
Query: 368 VDDDFNTIIAAIEEGKGIFYNIR-NFV 393
+ +D N + AI+ + I+ N +
Sbjct: 517 LRNDLNDVATAIDLSRKTLRRIKQNLL 543
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 2e-23
Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 228 YMGLVGICDPPRPHVRECMSTLLQSGV-KVKLVTGDGQETATAIASMVGLDTIHGKVLSG 286
Y+G + + D PRP E ++ L G+ KV ++TGD + A +A +G+D +H ++L
Sbjct: 353 YLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-- 410
Query: 287 DQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKAD 346
P KL IVK + V M GDG+ND AL AD
Sbjct: 411 -------------------------PEDKLEIVKELREKYGPVAMVGDGINDAPALAAAD 445
Query: 347 IGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSL 406
+GIAMG G+DV E AD++L++DD + + AI + ++ V L I L L
Sbjct: 446 VGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIAL-GIILLLIL 504
Query: 407 IALATLLRIP 416
+AL +L +
Sbjct: 505 LALFGVLPLW 514
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 89.2 bits (222), Expect = 1e-18
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 229 MGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQ 288
+G++ + D +P ++E + L + G+K ++TGD TA AIA+ G+D +
Sbjct: 439 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAEA----- 493
Query: 289 IDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348
TP KL +++ QA G +V MTGDG ND AL +AD+G
Sbjct: 494 ----------------------TPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG 531
Query: 349 IAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIA 408
+AM GT KEAA+M+ +D + +I +E GK + F ++ +A I
Sbjct: 532 VAM-NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAII 590
Query: 409 LATLLRIPNPLNAMQIL 425
A L A+ I+
Sbjct: 591 PAMFAAAYPQLGALNIM 607
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 88.8 bits (220), Expect = 2e-18
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQI 289
G++ + D + ++E + L + G+K ++TGD + TA AIA+ G+D
Sbjct: 439 GVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD------------ 486
Query: 290 DQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349
D + E TP K+ +++ QA G +V MTGDG ND AL +AD+G+
Sbjct: 487 DFIAE---------------ATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGV 531
Query: 350 AMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIAL 409
AM GT KEAA+M+ +D D +I + GK + F ++ +A I
Sbjct: 532 AM-NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIP 590
Query: 410 ATLLRIPNPLNAMQIL 425
A L A+ I+
Sbjct: 591 AIFAAAYPQLQALNIM 606
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 83.7 bits (208), Expect = 8e-17
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 28/155 (18%)
Query: 229 MGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQ 288
+G++ + D +P ++E + L + G+K ++TGD TA AIA+ G+D D
Sbjct: 437 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD---------DF 487
Query: 289 IDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348
+ + TP KL +++ QA G +V MTGDG ND AL +AD+G
Sbjct: 488 LAE------------------ATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG 529
Query: 349 IAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGK 383
+AM GT KEA +M+ +D + +I +E GK
Sbjct: 530 VAM-NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGK 563
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 3e-16
Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 37/197 (18%)
Query: 231 LVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQID 290
L+ I DP R + L ++G ++ ++TGD TA AIA G+D +V++G
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID----EVIAG---- 695
Query: 291 QMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350
V P K +K Q+ G V M GDG+ND AL +AD+GIA
Sbjct: 696 -------------------VLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIA 736
Query: 351 MGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRN-----FVRFQLSTSIAALS 405
MG G+DV E A + L+ + A+ + N++ F+ L IAA
Sbjct: 737 MGG-GSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGI 795
Query: 406 LIAL-ATLLRIPNPLNA 421
L TLL NP+ A
Sbjct: 796 LWPFTGTLL---NPVVA 809
|
Length = 834 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 5e-16
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 17 EKVHGDGRNSSRIRSKPETGTLLEVGCVCNNASII--GDSLLGQPTEGALLAAGMKFGLY 74
+V DG + +LE G +CNNA D+LLG PT+ AL+ MKFGL
Sbjct: 364 GEVIVDGDVLHGFYT-VAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLD 422
Query: 75 AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSC 107
+ E Y+R+ E PFSSE+K MAV+C+ ++ S
Sbjct: 423 DLRETYIRVAEVPFSSERKWMAVKCVHRQDRSE 455
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 9e-14
Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 35/180 (19%)
Query: 211 GKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI 270
GK +V + L++ +GL+ + D R R+ +S L G+K ++TGD A AI
Sbjct: 547 GKTVVLV-----LRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAI 601
Query: 271 ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVG 330
A +G+D +L D++ +TE +
Sbjct: 602 AGELGID-FRAGLLPEDKVKAVTELNQHAP----------------------------LA 632
Query: 331 MTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390
M GDG+ND A+K A IGIAMG GTDV E AD L + + IE + NIR
Sbjct: 633 MVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIR 691
|
Length = 741 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 2e-13
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 124 CVCNNASII------GDSLLGQPTEGALLAAGMKFGLY--AVNEHYVRLKEYPFSSEQKM 175
+CN+A G ++G PTE ALL K G+ + Y R+ E PF+SE+K
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKR 60
Query: 176 MAVRVHKIGHN 186
M+ VHK+ +
Sbjct: 61 MST-VHKLEDD 70
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 4e-12
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 43 CVCNNASII------GDSLLGQPTEGALLAAGMKFGLY--AVNEHYVRLKEYPFSSEQKM 94
+CN+A G ++G PTE ALL K G+ + Y R+ E PF+SE+K
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKR 60
Query: 95 MAV 97
M+
Sbjct: 61 MST 63
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 2e-10
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 284 LSGDQIDQMTEH---QLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGV 340
+SG + H L ++++ TVF R+ P K T+V+ Q VGM GDG ND
Sbjct: 756 MSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCG 815
Query: 341 ALKKADIGIAM 351
ALK+AD+GI++
Sbjct: 816 ALKQADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (154), Expect = 2e-10
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 253 GVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312
G++ + TGD + TA IA G+D + P
Sbjct: 457 GIETVMCTGDNELTAATIAKEAGVDRFVAE---------------------------CKP 489
Query: 313 RHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDF 372
K+ +++ QA G IV MTGDG ND AL +A++G+AM GT KEAA++I +D +
Sbjct: 490 EDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAM-NSGTMSAKEAANLIDLDSNP 548
Query: 373 NTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQIL 425
++ + GK + + F ++ IA I A + +N + I+
Sbjct: 549 TKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIM 601
|
Length = 673 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 4e-08
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 20/127 (15%)
Query: 222 NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG 281
+ DL +GL+ + DP P RE + L ++G+K+ ++TGD + TA AIA ++GL
Sbjct: 79 AVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLF---D 135
Query: 282 KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK--LTIVKAFQANGVIVGMTGDGVNDG 339
++S D + P K ++ V M GDGVND
Sbjct: 136 ALVSAD---------------LYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDI 180
Query: 340 VALKKAD 346
A K A
Sbjct: 181 PAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 1e-07
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 20 HGDGRNSSRIRSKPETGTLLEVGCVCNNASI--IGDSLLGQPTEGALLAAGMKFG----L 73
G + ++ P L +CN+ + G G PTEGAL+ K G L
Sbjct: 374 GGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDL 433
Query: 74 YAVNEHYVRLKEYPFSSEQKMMAV 97
+ Y L E PF SE+K M+V
Sbjct: 434 SGLEVEYPILAEIPFDSERKRMSV 457
|
Length = 917 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 2e-05
Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 49/181 (27%)
Query: 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA------------ 271
+DL +G I D + V E + L Q+G+K+ ++TGD ETA I
Sbjct: 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQ 677
Query: 272 ---SMVGLDTI--------------------------HGKVLSGDQIDQMTEHQLQQ--- 299
+ LD V+ G + + +L++
Sbjct: 678 IVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFL 737
Query: 300 --VVNSVTVFY-RVTPRHKLTIVKAFQ-ANGVIVGMTGDGVNDGVALKKADIGIAM-GKQ 354
+ V RV+P K +V+ + + G GDG ND +++AD+G+ + GK+
Sbjct: 738 QLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKE 797
Query: 355 G 355
G
Sbjct: 798 G 798
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 35/149 (23%)
Query: 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD-------TIHGKVLSGDQI 289
P E + TL + G KV +++G A + +GLD + L+G
Sbjct: 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVE 144
Query: 290 DQMTEHQ-----LQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKK 344
+ + L ++ ++P + + GDG ND +K
Sbjct: 145 GPIVDASYKGKTLLILLRK----EGISPENTV--------------AVGDGANDLSMIKA 186
Query: 345 ADIGIAMG-----KQGTDVCKEAADMILV 368
A +GIA +Q D+C D+ +
Sbjct: 187 AGLGIAFNAKPKLQQKADICINKKDLTDI 215
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 608 | |||
| KOG0202|consensus | 972 | 100.0 | ||
| KOG0204|consensus | 1034 | 100.0 | ||
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| KOG0203|consensus | 1019 | 100.0 | ||
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208|consensus | 1140 | 100.0 | ||
| KOG0206|consensus | 1151 | 100.0 | ||
| KOG0210|consensus | 1051 | 100.0 | ||
| KOG0209|consensus | 1160 | 100.0 | ||
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0205|consensus | 942 | 100.0 | ||
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| KOG0207|consensus | 951 | 99.97 | ||
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 99.97 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.96 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.96 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 99.95 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 99.95 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.92 | |
| KOG4383|consensus | 1354 | 99.75 | ||
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.73 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.54 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.5 | |
| KOG0202|consensus | 972 | 99.46 | ||
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 99.3 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.3 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.26 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.25 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.23 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.22 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 99.21 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.2 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.18 | |
| PLN02887 | 580 | hydrolase family protein | 99.14 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.13 | |
| KOG0203|consensus | 1019 | 99.12 | ||
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.11 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.11 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.06 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.02 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.97 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.95 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.95 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.95 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 98.95 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 98.94 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 98.91 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.91 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.9 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.85 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.81 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.75 | |
| KOG0204|consensus | 1034 | 98.71 | ||
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.68 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 98.66 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.61 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.6 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.58 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.55 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.53 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.46 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.45 | |
| KOG1615|consensus | 227 | 98.39 | ||
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 98.36 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.35 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.34 | |
| KOG0206|consensus | 1151 | 98.33 | ||
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.3 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.25 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.25 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.25 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.24 | |
| KOG0210|consensus | 1051 | 98.23 | ||
| PLN02382 | 413 | probable sucrose-phosphatase | 98.22 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.19 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.17 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.15 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.12 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.12 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.12 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.1 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.07 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.06 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.04 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.0 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.98 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.98 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.95 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.91 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.91 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.88 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.88 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.82 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.82 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.82 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.78 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.78 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.76 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.7 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.7 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.69 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.64 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.58 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.52 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.52 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.51 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.49 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.46 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.43 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.43 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.42 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.38 | |
| PLN02940 | 382 | riboflavin kinase | 97.35 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.34 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.34 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.3 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.29 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.28 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.27 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 97.25 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.2 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 97.18 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 97.17 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.14 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.12 | |
| PLN02811 | 220 | hydrolase | 97.08 | |
| KOG0208|consensus | 1140 | 97.0 | ||
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.99 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.93 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.9 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 96.87 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.87 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.72 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.68 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.64 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.63 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.58 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.57 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.49 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.44 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.42 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.4 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.36 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.27 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 96.27 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.26 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 96.24 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.2 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.17 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.05 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.02 | |
| KOG0209|consensus | 1160 | 95.96 | ||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.96 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.95 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.81 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.74 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 95.65 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.54 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.52 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.48 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.47 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 95.43 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.35 | |
| PLN02423 | 245 | phosphomannomutase | 95.35 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.33 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 95.21 | |
| KOG3120|consensus | 256 | 95.05 | ||
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 94.82 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.46 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 94.36 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 94.24 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 94.0 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 93.99 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 93.18 | |
| KOG3040|consensus | 262 | 93.07 | ||
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 93.06 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 92.88 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 92.85 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 92.78 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.58 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 91.69 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 91.56 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 91.38 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 89.49 | |
| PLN02151 | 354 | trehalose-phosphatase | 89.33 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 89.22 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 88.13 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 87.67 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 87.06 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 86.84 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 86.75 | |
| KOG3085|consensus | 237 | 86.68 | ||
| KOG0205|consensus | 942 | 85.32 | ||
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 83.05 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 82.01 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 81.54 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 81.22 |
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-98 Score=789.05 Aligned_cols=531 Identities=40% Similarity=0.653 Sum_probs=483.1
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--------------------------
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL-------------------------- 116 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~-------------------------- 116 (608)
|+++.++++|..+|.+++.+++++|-.++.++.+|+|.|||||+|+|+|...-+
T Consensus 300 aVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v 379 (972)
T KOG0202|consen 300 AVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEV 379 (972)
T ss_pred chhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCce
Confidence 778888999999999999999999999999999999999999999987655320
Q ss_pred -----cc------------hhhhhccccceeeecccc-----CCCccHHHHHHHHHHcCccccc--cc-----------c
Q psy16789 117 -----HR------------LLEVGCVCNNASIIGDSL-----LGQPTEGALLAAGMKFGLYAVN--EH-----------Y 161 (608)
Q Consensus 117 -----kg------------~~ei~~lc~~a~~~~~~~-----~gdp~E~Al~~~~~~~~~~~~~--~~-----------~ 161 (608)
++ ..++.++||++....+.. .|+|||.||..+++|.++...+ .. |
T Consensus 380 ~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~ 459 (972)
T KOG0202|consen 380 FKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVY 459 (972)
T ss_pred EecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHH
Confidence 00 123779999998887765 9999999999999999986632 22 3
Q ss_pred ----ccceeeeCChHHHHHHhHhhhc----CCcCCCCchhHHHHhhhh----------------------hhhHHHhhcc
Q psy16789 162 ----VRLKEYPFSSEQKMMAVRVHKI----GHNLPSKRDGKMILSQSC----------------------SEYPKFQTLG 211 (608)
Q Consensus 162 ----~~~~~~pF~s~~k~m~v~~~~~----~~~~~~kg~~~~~~~~~~----------------------~~~~~~~~~g 211 (608)
+...++||||++|+|+|.+.+. +..++.|||+|.++++|. +...+|+++|
T Consensus 460 ~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~g 539 (972)
T KOG0202|consen 460 SRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEG 539 (972)
T ss_pred HHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhcc
Confidence 4559999999999999998532 245799999999999773 2346789999
Q ss_pred CceEEEEEcc-------------------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Q psy16789 212 KGLVAMARGS-------------------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS 272 (608)
Q Consensus 212 ~r~l~~a~~~-------------------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~ 272 (608)
+|+|++|+++ .|+||+|+|++|+.||||+++.++|+.|+++||||+|+|||+.+||.+||+
T Consensus 540 LRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r 619 (972)
T KOG0202|consen 540 LRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAR 619 (972)
T ss_pred ceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH
Confidence 9999999983 267999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCC----ccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 273 MVGLDTIHG----KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 273 ~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
++|+...+. ..++|+++++++++++++...+..+|+|++|.+|.++|+.||+.|+.|+|||||.||+||||.||+|
T Consensus 620 ~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 620 EIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred HhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence 999987765 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHH
Q psy16789 349 IAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWIN 428 (608)
Q Consensus 349 ia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 428 (608)
||||.+|++++|+|||+|+.||||++|+.+++|||.+|.|+++|+.|+++.|+.++...+++..++.|.|++|+|+||+|
T Consensus 700 IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiN 779 (972)
T KOG0202|consen 700 IAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWIN 779 (972)
T ss_pred eeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc--ccccccc----------
Q psy16789 429 IIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMS--DNIVSKR---------- 496 (608)
Q Consensus 429 ~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---------- 496 (608)
+++|.+|+.+|+.+|++.++|++|||+.++++++.+.+++++..|++...++++.|.+.+. ++...++
T Consensus 780 lvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~ 859 (972)
T KOG0202|consen 780 LVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCR 859 (972)
T ss_pred eeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcc
Confidence 9999999999999999999999999999999999999999999999877666555544433 2222222
Q ss_pred --------------cchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhccccccccccccc
Q psy16789 497 --------------DTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562 (608)
Q Consensus 497 --------------~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~ 562 (608)
..|++|..+++..++|.+++++...++|.+++|.|+|+.+++.++++++++++|+|+++..|.+.+
T Consensus 860 ~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~ 939 (972)
T KOG0202|consen 860 DFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEP 939 (972)
T ss_pred cccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecC
Confidence 238999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy16789 563 LTINDIAFLTALTSTVFFVSEIKKAIERICE 593 (608)
Q Consensus 563 l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~ 593 (608)
+++.+|++++.+++..++++|++|++.|++.
T Consensus 940 l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 940 LSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred CcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999999999999999999999764
|
|
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-89 Score=717.47 Aligned_cols=518 Identities=28% Similarity=0.455 Sum_probs=463.6
Q ss_pred HHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc-------c-------chhh-hh-------cc
Q psy16789 68 GMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL-------H-------RLLE-VG-------CV 125 (608)
Q Consensus 68 ~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~-------k-------g~~e-i~-------~l 125 (608)
+++..++.|.++...++.+...++.+..+++|.|||||+|.|.|.++-. | ..++ +. +.
T Consensus 408 sLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~ 487 (1034)
T KOG0204|consen 408 SLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQ 487 (1034)
T ss_pred HHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhh
Confidence 3444457889999999999999999999999999999999998877641 2 1221 11 12
Q ss_pred ccceeee-------ccccCCCccHHHHHHHHHHcCccc--cccccccceeeeCChHHHHHHhHhhhcCC--cCCCCchhH
Q psy16789 126 CNNASII-------GDSLLGQPTEGALLAAGMKFGLYA--VNEHYVRLKEYPFSSEQKMMAVRVHKIGH--NLPSKRDGK 194 (608)
Q Consensus 126 c~~a~~~-------~~~~~gdp~E~Al~~~~~~~~~~~--~~~~~~~~~~~pF~s~~k~m~v~~~~~~~--~~~~kg~~~ 194 (608)
.++..+. +.++.|+|||.||+.|+.+.|.+. .+.+.+..+.+||+|++|+|+++++.++. +.++||+.|
T Consensus 488 Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsE 567 (1034)
T KOG0204|consen 488 NTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASE 567 (1034)
T ss_pred cCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHH
Confidence 2222221 225789999999999999988754 56788899999999999999999974332 389999999
Q ss_pred HHHhhhh---------------------hhhHHHhhccCceEEEEEcc----------------CCCCceEEEEeeecCC
Q psy16789 195 MILSQSC---------------------SEYPKFQTLGKGLVAMARGS----------------NLQDLCYMGLVGICDP 237 (608)
Q Consensus 195 ~~~~~~~---------------------~~~~~~~~~g~r~l~~a~~~----------------~e~~l~~~G~~~~~d~ 237 (608)
.++.+|+ +.++.|+++|+|++|+||++ .+.+|+++|++|++||
T Consensus 568 iVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDP 647 (1034)
T KOG0204|consen 568 IVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDP 647 (1034)
T ss_pred HHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCC
Confidence 9988654 46789999999999999974 2478999999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.||+++++|+.|++|||.|.|+||||..||++||.+|||..+++ .+++|.+|+++++++++++++++.|++|.+|.||
T Consensus 648 vRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK 727 (1034)
T KOG0204|consen 648 VRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDK 727 (1034)
T ss_pred CCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchH
Confidence 99999999999999999999999999999999999999998877 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhh
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRF 395 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~ 395 (608)
..+|+.+++.|++|+++|||.||+|||++||||+|||..|+++||++||++++||||.+|+++++|||+.|.||+||++|
T Consensus 728 ~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQF 807 (1034)
T KOG0204|consen 728 HLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQF 807 (1034)
T ss_pred HHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHH
Q psy16789 396 QLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASI 475 (608)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~ 475 (608)
+++.|++++...+++++....+|++++|+||+|++||.+.+++||++||.+++|+|+|..++.+++++.||.+++.|+++
T Consensus 808 QLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~Y 887 (1034)
T KOG0204|consen 808 QLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVY 887 (1034)
T ss_pred EEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcc-----cccc--cccccchhhHHHHHHHHHHHHHHhhccc-cceeeeCCccchHHHHHHHHHHHHHHH
Q psy16789 476 IIVGTLYVFKREM-----SDNI--VSKRDTTMTFTCFVFFDMFNALSCRSQI-KSVFTIGLFTNKMFLFAVCASVVGQLF 547 (608)
Q Consensus 476 ~~~~~~~~~~~~~-----~~~~--~~~~~~t~~f~~lv~~~l~~~~~~~~~~-~~~f~~~~~~N~~~~~~~~~~i~~~~~ 547 (608)
+.+.++.+.+... .... .....+|+.|++|+++|+||.++.|..+ .++|+ ++++|++|+..+...+++|++
T Consensus 888 Ql~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFk-gi~~N~~F~~ii~~T~v~Qvi 966 (1034)
T KOG0204|consen 888 QLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFK-GIFRNRLFCVIITITVVSQVI 966 (1034)
T ss_pred HHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHH-HHhcCceEEEEeeeeeehhhh
Confidence 9988888766542 1111 1335679999999999999999999875 46777 899999999999999999999
Q ss_pred HhcccccccccccccCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 548 VIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAI 588 (608)
Q Consensus 548 ii~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~ 588 (608)
++.+ ++.+|+++++++.+|++|++++++.+++..+.|.+
T Consensus 967 IveF--~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 967 IVEF--GGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhhh--cCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 9988 57889999999999999999999999999999966
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-83 Score=733.73 Aligned_cols=530 Identities=28% Similarity=0.434 Sum_probs=462.7
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc----------c----------c----
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL----------H----------R---- 118 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~----------k----------g---- 118 (608)
++++.++++|..+|.+++..+++++..++.+.++++|.|||||+|+|++.+..+ . |
T Consensus 327 ~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~ 406 (1053)
T TIGR01523 327 AVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSG 406 (1053)
T ss_pred HHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccc
Confidence 566777777888999999999999999999999999999999999998754311 0 0
Q ss_pred -------------------------------------------hhhhhccccceeeecc------ccCCCccHHHHHHHH
Q psy16789 119 -------------------------------------------LLEVGCVCNNASIIGD------SLLGQPTEGALLAAG 149 (608)
Q Consensus 119 -------------------------------------------~~ei~~lc~~a~~~~~------~~~gdp~E~Al~~~~ 149 (608)
..+.+.+||++....+ ...|||+|.||++++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a 486 (1053)
T TIGR01523 407 IPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFA 486 (1053)
T ss_pred ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHH
Confidence 0013578998776432 457999999999999
Q ss_pred HHcCccc--------c-------------------ccccccceeeeCChHHHHHHhHhhhc-C--CcCCCCchhHHHHhh
Q psy16789 150 MKFGLYA--------V-------------------NEHYVRLKEYPFSSEQKMMAVRVHKI-G--HNLPSKRDGKMILSQ 199 (608)
Q Consensus 150 ~~~~~~~--------~-------------------~~~~~~~~~~pF~s~~k~m~v~~~~~-~--~~~~~kg~~~~~~~~ 199 (608)
.+.|++. . ..+|+++.++||||++|||++++++. + ..+++||+++.+++.
T Consensus 487 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~ 566 (1053)
T TIGR01523 487 KKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIEC 566 (1053)
T ss_pred HHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHh
Confidence 9877631 0 23578899999999999999998753 2 346899999999987
Q ss_pred hhh----------------------hhHHHhhccCceEEEEEcc--------------------CCCCceEEEEeeecCC
Q psy16789 200 SCS----------------------EYPKFQTLGKGLVAMARGS--------------------NLQDLCYMGLVGICDP 237 (608)
Q Consensus 200 ~~~----------------------~~~~~~~~g~r~l~~a~~~--------------------~e~~l~~~G~~~~~d~ 237 (608)
|.. ..++|+++|+|||++|||+ .|+||+|+|+++++||
T Consensus 567 c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp 646 (1053)
T TIGR01523 567 CSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDP 646 (1053)
T ss_pred hhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecC
Confidence 742 3567999999999999983 2579999999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----------CCccccchhhcccCHHHHHHHhhcceEE
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----------HGKVLSGDQIDQMTEHQLQQVVNSVTVF 307 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----------~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 307 (608)
+|++++++|++|+++||+++|+|||++.||.++|+++||... ...+++|.+++.++++++.+...+..||
T Consensus 647 ~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ 726 (1053)
T TIGR01523 647 PRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVI 726 (1053)
T ss_pred CchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEE
Confidence 999999999999999999999999999999999999999754 3479999999999999999999999999
Q ss_pred EEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHH
Q psy16789 308 YRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFY 387 (608)
Q Consensus 308 ~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~ 387 (608)
+|++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|++.++++||+++.+++|.++.+++++||++|+
T Consensus 727 ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ 806 (1053)
T TIGR01523 727 ARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFD 806 (1053)
T ss_pred EecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhc----C-CCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcc
Q psy16789 388 NIRNFVRFQLSTSIAALSLIALATLLR----I-PNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMIT 462 (608)
Q Consensus 388 ~i~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~ 462 (608)
|+++++.|.+++|+..+++.+++.+++ . +.||+|+|+||+|+++|.+|+++++++||++++|++||++++.++++
T Consensus 807 ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~ 886 (1053)
T TIGR01523 807 NIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQ 886 (1053)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccC
Confidence 999999999999999998888888873 3 47999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhc---cccc--------------ccccccchhhHHHHHHHHHHHHHHhhccccceee
Q psy16789 463 RALVVNVLMSASIIIVGTLYVFKRE---MSDN--------------IVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFT 525 (608)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------~~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~ 525 (608)
+.++..++..|++.++..+..|++. +..+ .....++|++|.+++++|+++.+++|+.+.++|+
T Consensus 887 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~ 966 (1053)
T TIGR01523 887 KELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFN 966 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhh
Confidence 9999888888887766655554321 1000 0122468999999999999999999998888876
Q ss_pred eC---------------CccchHHHHHHHHHHHHHHHHhccccccc-ccccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 526 IG---------------LFTNKMFLFAVCASVVGQLFVIYFPPLQK-VFQTEALTINDIAFLTALTSTVFFVSEIKKAIE 589 (608)
Q Consensus 526 ~~---------------~~~N~~~~~~~~~~i~~~~~ii~~p~l~~-~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~ 589 (608)
.+ .++|++++++++++++++++++|+|+++. +|++.|+++ .|+++++++++.++++|++|+++
T Consensus 967 ~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~ 1045 (1053)
T TIGR01523 967 LHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGK 1045 (1053)
T ss_pred cCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 67999999999999999999999999986 999999996 89999999999999999999987
Q ss_pred Hhhh
Q psy16789 590 RICE 593 (608)
Q Consensus 590 r~~~ 593 (608)
|+.+
T Consensus 1046 r~~~ 1049 (1053)
T TIGR01523 1046 RRLF 1049 (1053)
T ss_pred Hhcc
Confidence 6654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-82 Score=722.22 Aligned_cols=517 Identities=32% Similarity=0.508 Sum_probs=453.5
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccch--------------------hhh
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRL--------------------LEV 122 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~--------------------~ei 122 (608)
+.++.++..|..++.+++..++++|..++.++++++|.|||||+|||++.+..+.-. ...
T Consensus 316 ~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 395 (917)
T COG0474 316 AVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLA 395 (917)
T ss_pred HHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHH
Confidence 556677777778999999999999999999999999999999999999877543211 114
Q ss_pred hccccceeeec--cccCCCccHHHHHHHHHHcCc--cc--cccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhH
Q psy16789 123 GCVCNNASIIG--DSLLGQPTEGALLAAGMKFGL--YA--VNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGK 194 (608)
Q Consensus 123 ~~lc~~a~~~~--~~~~gdp~E~Al~~~~~~~~~--~~--~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~ 194 (608)
+++||++.... +...|||+|.||++++.+.|. .. ...+|++++++||||+||||+++++... ...++|||++
T Consensus 396 ~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe 475 (917)
T COG0474 396 AALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPE 475 (917)
T ss_pred HHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChH
Confidence 56999877654 556899999999999999876 33 4456678999999999999999997433 4569999999
Q ss_pred HHHhhh-----------------hhhhHHHhhccCceEEEEEc------------cCCCCceEEEEeeecCCCChhHHHH
Q psy16789 195 MILSQS-----------------CSEYPKFQTLGKGLVAMARG------------SNLQDLCYMGLVGICDPPRPHVREC 245 (608)
Q Consensus 195 ~~~~~~-----------------~~~~~~~~~~g~r~l~~a~~------------~~e~~l~~~G~~~~~d~~r~~~~~~ 245 (608)
.+++.| ++..++|+++|+||+++||| ..|+||+|+|+++++||||++++++
T Consensus 476 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~a 555 (917)
T COG0474 476 VILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEA 555 (917)
T ss_pred HHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHH
Confidence 998544 34568899999999999997 3578999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 246 MSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 246 I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
|+.|+++||++||+||||..||++||++||+..+.. .+++|++++.++++++.+.+.++.||||++|+||.++|+.+|
T Consensus 556 I~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq 635 (917)
T COG0474 556 IEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQ 635 (917)
T ss_pred HHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999988874 499999999999999999999999999999999999999999
Q ss_pred HCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHH
Q psy16789 324 ANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAA 403 (608)
Q Consensus 324 ~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~ 403 (608)
+.|+.|+|||||.||+||||+|||||||+++|++++|++||+++.+++|..+..+++|||++|.|+++++.|.+++|+..
T Consensus 636 ~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~ 715 (917)
T COG0474 636 KSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGE 715 (917)
T ss_pred hCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-CchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHH-HHHHHHHH
Q psy16789 404 LSLIALATLLRIP-NPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSA-SIIIVGTL 481 (608)
Q Consensus 404 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ 481 (608)
++..+++.+++.+ .|++++|++|+|+++|.+|+++++.++|+.+.|++||++++.++++++.++.++... ...++..+
T Consensus 716 ~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~ 795 (917)
T COG0474 716 VLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFI 795 (917)
T ss_pred HHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHH
Confidence 9888888888777 899999999999999999999999999999999999999999999999999965554 44333333
Q ss_pred Hhhhhcccccc--------cccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccc
Q psy16789 482 YVFKREMSDNI--------VSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPP 553 (608)
Q Consensus 482 ~~~~~~~~~~~--------~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~ 553 (608)
+.|...+.... .....+|+.|..+++++.++.+.+++...+++...++.|+.++++++++.++++++.++|+
T Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~ 875 (917)
T COG0474 796 LTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPP 875 (917)
T ss_pred HHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHH
Confidence 33322221110 1445789999999999999999999988888888888999999999999999999999998
Q ss_pred cc-cccccccCChhHHHHHHHHHHHHH
Q psy16789 554 LQ-KVFQTEALTINDIAFLTALTSTVF 579 (608)
Q Consensus 554 l~-~~f~~~~l~~~~w~~~~~~~~~~~ 579 (608)
+. ..|...+++...|+++++......
T Consensus 876 ~~~~~f~~~~~~~~~~~~~~~~~~~~~ 902 (917)
T COG0474 876 LNLKIFQPTPLSLFEWLIAIAVALLLL 902 (917)
T ss_pred hHhhhccCCCCcHHHHHHHHHHHHHHH
Confidence 88 789999999888888777764443
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=710.32 Aligned_cols=527 Identities=52% Similarity=0.836 Sum_probs=473.4
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cc------------------------
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HR------------------------ 118 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg------------------------ 118 (608)
..+...|..++.++...++..+..++.+.++++|.|||||+|+|++.+..+ .+
T Consensus 295 t~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (884)
T TIGR01522 295 TVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLH 374 (884)
T ss_pred HHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccc
Confidence 345555667888899999999999999999999999999999998765322 11
Q ss_pred ------hhh---hhccccceeeec--cccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhh---cC
Q psy16789 119 ------LLE---VGCVCNNASIIG--DSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHK---IG 184 (608)
Q Consensus 119 ------~~e---i~~lc~~a~~~~--~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~---~~ 184 (608)
..+ ..++||++.... ++..|||+|.|+++++.+.++...+..|+.++++||+|++|+|+++++. +.
T Consensus 375 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~ 454 (884)
T TIGR01522 375 GFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRS 454 (884)
T ss_pred cccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCe
Confidence 012 347788876533 3567999999999999988776555678899999999999999998764 23
Q ss_pred CcCCCCchhHHHHhhhh---------------------hhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHH
Q psy16789 185 HNLPSKRDGKMILSQSC---------------------SEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVR 243 (608)
Q Consensus 185 ~~~~~kg~~~~~~~~~~---------------------~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~ 243 (608)
...+.||+++.+++.|. +..++++++|+|++++||++.+++|+|+|+++++||+|++++
T Consensus 455 ~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~ 534 (884)
T TIGR01522 455 EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVK 534 (884)
T ss_pred EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHH
Confidence 34689999998887653 234568899999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
++|++|+++|++++|+|||+..||.++|+++|+......+++|++++.++++++.+.+.+..+|+|++|+||.++|+.+|
T Consensus 535 ~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq 614 (884)
T TIGR01522 535 EAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQ 614 (884)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred HCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHH
Q psy16789 324 ANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAA 403 (608)
Q Consensus 324 ~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~ 403 (608)
+.|+.|+|+|||.||+||+++|||||+||.++++.++++||+++.+++|..+.+++++||++|+|+++++.|.++.|+..
T Consensus 615 ~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~ 694 (884)
T TIGR01522 615 KRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAA 694 (884)
T ss_pred HCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 99999999999999999999999999998679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHh
Q psy16789 404 LSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYV 483 (608)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 483 (608)
+.+.+++.+++.+.|++++|++|+|+++|.+|+++++++||++++|++||++++++++++.++..++++|+++.++.++.
T Consensus 695 ~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 774 (884)
T TIGR01522 695 LSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFV 774 (884)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999888777766
Q ss_pred hhhcccccccccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccC
Q psy16789 484 FKREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEAL 563 (608)
Q Consensus 484 ~~~~~~~~~~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l 563 (608)
|+..+..+.....++|++|.+++++|++|.+++|+.+.++|+.++++|++++++++++++++++++|+|+++.+|++.|+
T Consensus 775 ~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l 854 (884)
T TIGR01522 775 FVREMQDGVITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEAL 854 (884)
T ss_pred HHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 66544333223456899999999999999999999888889888899999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy16789 564 TINDIAFLTALTSTVFFVSEIKKAIERIC 592 (608)
Q Consensus 564 ~~~~w~~~~~~~~~~~~~~~l~K~~~r~~ 592 (608)
++.+|+++++++++.++++|++|+++|++
T Consensus 855 ~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 855 SIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999887654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-80 Score=712.24 Aligned_cols=535 Identities=28% Similarity=0.428 Sum_probs=459.5
Q ss_pred HHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---------cc-----------------
Q psy16789 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---------HR----------------- 118 (608)
Q Consensus 65 l~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---------kg----------------- 118 (608)
+..+...+..++.++...+++.+..++.+.++++|.|||||+|+|++.+..+ .+
T Consensus 314 v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (997)
T TIGR01106 314 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWL 393 (997)
T ss_pred HHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHH
Confidence 3334444556788889999999999999999999999999999998776421 10
Q ss_pred -hhhhhccccceeeecc---------ccCCCccHHHHHHHHHHcCcc--ccccccccceeeeCChHHHHHHhHhhhc---
Q psy16789 119 -LLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGLY--AVNEHYVRLKEYPFSSEQKMMAVRVHKI--- 183 (608)
Q Consensus 119 -~~ei~~lc~~a~~~~~---------~~~gdp~E~Al~~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~--- 183 (608)
..+++++||++....+ ...|||+|.||++++.+.+.+ ..+++|+.+.++||||+||+|++++...
T Consensus 394 ~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~ 473 (997)
T TIGR01106 394 ALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPR 473 (997)
T ss_pred HHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCC
Confidence 1125688998765322 357999999999999875432 2456788999999999999999876421
Q ss_pred --CCcCCCCchhHHHHhhhh--------------------hhhHHHhhccCceEEEEEccC-------------------
Q psy16789 184 --GHNLPSKRDGKMILSQSC--------------------SEYPKFQTLGKGLVAMARGSN------------------- 222 (608)
Q Consensus 184 --~~~~~~kg~~~~~~~~~~--------------------~~~~~~~~~g~r~l~~a~~~~------------------- 222 (608)
...++.||+++.+++.|. +.+++++++|+||+++||++.
T Consensus 474 ~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~ 553 (997)
T TIGR01106 474 DPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFP 553 (997)
T ss_pred CceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhcc
Confidence 234589999999988763 235679999999999999731
Q ss_pred CCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC----------------------
Q psy16789 223 LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH---------------------- 280 (608)
Q Consensus 223 e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~---------------------- 280 (608)
|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+..++
T Consensus 554 e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~ 633 (997)
T TIGR01106 554 TDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRD 633 (997)
T ss_pred ccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhcccccccccccc
Confidence 6799999999999999999999999999999999999999999999999999996542
Q ss_pred --CccccchhhcccCHHHHHHHhhcce--EEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc
Q psy16789 281 --GKVLSGDQIDQMTEHQLQQVVNSVT--VFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGT 356 (608)
Q Consensus 281 --~~vi~g~~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~ 356 (608)
..+++|.+++.++++++.+.+.++. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|+
T Consensus 634 ~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~ 713 (997)
T TIGR01106 634 AKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGS 713 (997)
T ss_pred ccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCccc
Confidence 2589999999999999999998764 999999999999999999999999999999999999999999999997799
Q ss_pred HHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhH
Q psy16789 357 DVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPA 436 (608)
Q Consensus 357 ~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 436 (608)
+.++++||+++.+++|.+++++++|||++|.|+++++.|.++.|+..+++.+++.+++.++|++++|++|+|+++|.+|+
T Consensus 714 ~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~ 793 (997)
T TIGR01106 714 DVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPA 793 (997)
T ss_pred HHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCccccccCCCCC-CCCCcchHHHHHHH-HHHHHHHHHHHHhhhhccc----------c-----c-----c--
Q psy16789 437 QSLGVEPVDDDVKIQKPRNV-KEPMITRALVVNVL-MSASIIIVGTLYVFKREMS----------D-----N-----I-- 492 (608)
Q Consensus 437 ~~l~~~~~~~~~~~~~P~~~-~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~-----~-----~-- 492 (608)
++++++||++++|++||+++ ..+++++.++..++ ..|+++++..++.++..+. . . .
T Consensus 794 ~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 873 (997)
T TIGR01106 794 ISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLE 873 (997)
T ss_pred HHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccc
Confidence 99999999999999999985 67899988776643 3455555444443322110 0 0 0
Q ss_pred -c-------------ccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhccccccccc
Q psy16789 493 -V-------------SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVF 558 (608)
Q Consensus 493 -~-------------~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f 558 (608)
. ....+|+.|.+++++|+++++++|+.+.++|+.+ +.|++++.++++.++++++++|+|+++.+|
T Consensus 874 ~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~-~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f 952 (997)
T TIGR01106 874 DSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQG-MKNKILIFGLFEETALAAFLSYCPGMGVAL 952 (997)
T ss_pred cccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccC-CcCHHHHHHHHHHHHHHHHHHHhhhhHHHh
Confidence 0 0135899999999999999999999888888867 799999999999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy16789 559 QTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRSS 600 (608)
Q Consensus 559 ~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~~~~~ 600 (608)
++.|+++.+|+++++++++.+++.++.|++.|+++++|+++.
T Consensus 953 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~ 994 (997)
T TIGR01106 953 RMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRNPGGWVEKE 994 (997)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchhhHh
Confidence 999999999999999999999999999999998877777764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-80 Score=706.49 Aligned_cols=525 Identities=33% Similarity=0.532 Sum_probs=462.1
Q ss_pred HHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--c-------------c-----------
Q psy16789 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--H-------------R----------- 118 (608)
Q Consensus 65 l~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--k-------------g----------- 118 (608)
+..+...|..++.++...++..+..++.+.++++|.|||||+|+|++.+..+ . +
T Consensus 259 vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (917)
T TIGR01116 259 ITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIK 338 (917)
T ss_pred HHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccc
Confidence 3445555667888899999999999999999999999999999988765322 0 0
Q ss_pred -----------hhh----hhccccceeeecc------ccCCCccHHHHHHHHHHcCcccc------------------cc
Q psy16789 119 -----------LLE----VGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLYAV------------------NE 159 (608)
Q Consensus 119 -----------~~e----i~~lc~~a~~~~~------~~~gdp~E~Al~~~~~~~~~~~~------------------~~ 159 (608)
..+ ++++||++....+ ...|||+|.||++++.+.|++.. ++
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 418 (917)
T TIGR01116 339 DDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWND 418 (917)
T ss_pred cCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHh
Confidence 011 4678998876432 24699999999999998775421 34
Q ss_pred ccccceeeeCChHHHHHHhHhhhc-CCcCCCCchhHHHHhhhh---------------------hhhHHHhh-ccCceEE
Q psy16789 160 HYVRLKEYPFSSEQKMMAVRVHKI-GHNLPSKRDGKMILSQSC---------------------SEYPKFQT-LGKGLVA 216 (608)
Q Consensus 160 ~~~~~~~~pF~s~~k~m~v~~~~~-~~~~~~kg~~~~~~~~~~---------------------~~~~~~~~-~g~r~l~ 216 (608)
+|++++++||||+||||++++++. +..++.||+++.+++.|. +.+++|++ +|+||++
T Consensus 419 ~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~ 498 (917)
T TIGR01116 419 KFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLA 498 (917)
T ss_pred hcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 577899999999999999998753 344689999999988663 23567899 9999999
Q ss_pred EEEccC------------------CCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 217 MARGSN------------------LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 217 ~a~~~~------------------e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
+|||+. |+||+|+|+++++||+|++++++|++|+++|++++|+|||+..||.++|+++|+..
T Consensus 499 ~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 499 LAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFS 578 (917)
T ss_pred EEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCC
Confidence 999853 67999999999999999999999999999999999999999999999999999976
Q ss_pred CCC----ccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCC
Q psy16789 279 IHG----KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQ 354 (608)
Q Consensus 279 ~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~ 354 (608)
++. ..++|++++.+++++..+...+..||+|++|+||.++|+.+|+.|++|+|+|||.||++|+++|||||+|+ +
T Consensus 579 ~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~ 657 (917)
T TIGR01116 579 PDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-S 657 (917)
T ss_pred CCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-C
Confidence 543 46899999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred CcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhh
Q psy16789 355 GTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGP 434 (608)
Q Consensus 355 ~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 434 (608)
|++.+|++||+++.+++|..+.++++|||++|.|+++++.|.+++|+..++..+++.+++.+.||+++|++|+|+++|.+
T Consensus 658 g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~l 737 (917)
T TIGR01116 658 GTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGL 737 (917)
T ss_pred CcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred hHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc-c---------------c------
Q psy16789 435 PAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSD-N---------------I------ 492 (608)
Q Consensus 435 ~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~------ 492 (608)
|++++++++|++++|++||++++++++++++++.|+++|++++++++..|.+.+.. + .
T Consensus 738 p~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (917)
T TIGR01116 738 PATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYV 817 (917)
T ss_pred HHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999988876644443321110 0 0
Q ss_pred --cccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChhHHHH
Q psy16789 493 --VSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAF 570 (608)
Q Consensus 493 --~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~~w~~ 570 (608)
....++|++|.+++++|++|.+++|+.+.++|+.++++|++++++++++++++++++|+|+++..|++.|+++.+|++
T Consensus 818 ~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~ 897 (917)
T TIGR01116 818 FEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLM 897 (917)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHH
Confidence 123467999999999999999999998888898888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy16789 571 LTALTSTVFFVSEIKKAIER 590 (608)
Q Consensus 571 ~~~~~~~~~~~~~l~K~~~r 590 (608)
+++++++.++++|+.|+++|
T Consensus 898 ~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 898 VLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998763
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-78 Score=694.08 Aligned_cols=519 Identities=28% Similarity=0.429 Sum_probs=451.9
Q ss_pred HHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--cc---------------hhh---hhccc
Q psy16789 67 AGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--HR---------------LLE---VGCVC 126 (608)
Q Consensus 67 ~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--kg---------------~~e---i~~lc 126 (608)
.+...+..++.++...++..+..++.+.++++|.|||||+|+|++.+..+ .+ ..+ ....|
T Consensus 348 i~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (941)
T TIGR01517 348 IALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISL 427 (941)
T ss_pred HHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHh
Confidence 34444556788889999999999999999999999999999998765322 11 011 12334
Q ss_pred cceee-ec-----cccCCCccHHHHHHHHHHcCccc--cccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHH
Q psy16789 127 NNASI-IG-----DSLLGQPTEGALLAAGMKFGLYA--VNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMI 196 (608)
Q Consensus 127 ~~a~~-~~-----~~~~gdp~E~Al~~~~~~~~~~~--~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~ 196 (608)
|+... .. ....|||+|.|+++++.+.+.+. .+.+|+.++++||+|++|+|+++++..+ ...+.||+++.+
T Consensus 428 ~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~i 507 (941)
T TIGR01517 428 NSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIV 507 (941)
T ss_pred CCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHH
Confidence 44332 21 14679999999999998876543 3356788899999999999999987543 346899999988
Q ss_pred Hhhhh--------------------hhhHHHhhccCceEEEEEccC-----------CCCceEEEEeeecCCCChhHHHH
Q psy16789 197 LSQSC--------------------SEYPKFQTLGKGLVAMARGSN-----------LQDLCYMGLVGICDPPRPHVREC 245 (608)
Q Consensus 197 ~~~~~--------------------~~~~~~~~~g~r~l~~a~~~~-----------e~~l~~~G~~~~~d~~r~~~~~~ 245 (608)
++.|. +.+++++++|+||+++||++. |+||+|+|+++++||+|++++++
T Consensus 508 l~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~a 587 (941)
T TIGR01517 508 LKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREA 587 (941)
T ss_pred HHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHH
Confidence 87654 234678999999999999863 68999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHC
Q psy16789 246 MSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN 325 (608)
Q Consensus 246 I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~ 325 (608)
|++|+++||+++|+|||++.||.++|+++|+..++..+++|++++.++++++.+.+.+..+|||++|+||.++|+.+|+.
T Consensus 588 I~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~ 667 (941)
T TIGR01517 588 VQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDM 667 (941)
T ss_pred HHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999888889999999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHH
Q psy16789 326 GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALS 405 (608)
Q Consensus 326 g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~ 405 (608)
|++|+|+|||.||+|||++||||||||.+|++.|+++||+++.+++|.++.+++++||++|.|+++++.|.+++|+..+.
T Consensus 668 g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~ 747 (941)
T TIGR01517 668 GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVI 747 (941)
T ss_pred CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhh
Q psy16789 406 LIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFK 485 (608)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (608)
+.+++.+++.++|++++|++|+|+++|.+|++++++++|++++|++||++++.+++++.++.+++.+|+++.+..+.+++
T Consensus 748 ~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~ 827 (941)
T TIGR01517 748 LTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLF 827 (941)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888889999999999999999999999999999999999999999999999999999999999887776665554
Q ss_pred hcc-----ccc-----ccccccchhhHHHHHHHHHHHHHHhhcccc-ceeeeCCccchHHHHHHHHHHHHHHHHhccccc
Q psy16789 486 REM-----SDN-----IVSKRDTTMTFTCFVFFDMFNALSCRSQIK-SVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPL 554 (608)
Q Consensus 486 ~~~-----~~~-----~~~~~~~t~~f~~lv~~~l~~~~~~~~~~~-~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l 554 (608)
... ... ......+|+.|.+++++|+++.+++|+.+. ++|+ ++++|++++.+++++++++++++ |++
T Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~l~~~~~--~~~ 904 (941)
T TIGR01517 828 AGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFE-GLFKNRIFVTIMGFTFGFQVIIV--EFG 904 (941)
T ss_pred HHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccc-cccccHHHHHHHHHHHHHHHHHH--HHH
Confidence 321 110 012457899999999999999999999764 5666 88899999999998888886555 457
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 555 QKVFQTEALTINDIAFLTALTSTVFFVSEIKKAI 588 (608)
Q Consensus 555 ~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~ 588 (608)
+.+|++.|+++.+|+++++++++.+++.++.|.+
T Consensus 905 ~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 905 GSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999976
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=675.30 Aligned_cols=515 Identities=23% Similarity=0.278 Sum_probs=433.2
Q ss_pred HHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cch--hhhh---ccccceeeecccc
Q psy16789 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRL--LEVG---CVCNNASIIGDSL 136 (608)
Q Consensus 65 l~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~--~ei~---~lc~~a~~~~~~~ 136 (608)
+..+...|..++.++...+++++.-++.+.++++|.|||||+|+|++.+... .|. .+++ .+|+. ....
T Consensus 339 vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~----~~~~ 414 (903)
T PRK15122 339 VSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSF----HQSG 414 (903)
T ss_pred HHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCC----CCCC
Confidence 3445555666788899999999999999999999999999999998876543 332 1222 22211 1233
Q ss_pred CCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhh--cCCcCCCCchhHHHHhhhh-------------
Q psy16789 137 LGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHK--IGHNLPSKRDGKMILSQSC------------- 201 (608)
Q Consensus 137 ~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~--~~~~~~~kg~~~~~~~~~~------------- 201 (608)
.|||+|.|+++++.+.+......+|+...++||++.+|+|++++++ +....+.||+++.+++.|.
T Consensus 415 ~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 494 (903)
T PRK15122 415 MKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDE 494 (903)
T ss_pred CCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCH
Confidence 6899999999999987654444568889999999999999998764 2344689999998887653
Q ss_pred -------hhhHHHhhccCceEEEEEcc-------------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcC
Q psy16789 202 -------SEYPKFQTLGKGLVAMARGS-------------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTG 261 (608)
Q Consensus 202 -------~~~~~~~~~g~r~l~~a~~~-------------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TG 261 (608)
+..++++++|+|++++||++ .|+||+|+|+++++||+|++++++|++|+++||+++|+||
T Consensus 495 ~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTG 574 (903)
T PRK15122 495 ARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTG 574 (903)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECC
Confidence 23567899999999999974 3678999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHH
Q psy16789 262 DGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVA 341 (608)
Q Consensus 262 d~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~a 341 (608)
|++.||.++|+++||.. +.+++|.+++.++++++.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+||
T Consensus 575 D~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPA 652 (903)
T PRK15122 575 DNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPA 652 (903)
T ss_pred CCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHH
Confidence 99999999999999963 4699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhH
Q psy16789 342 LKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNA 421 (608)
Q Consensus 342 l~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (608)
|++|||||||+ +|++.||++||+++.+++|.++++++++||++|+|+++++.|.++.|+..++..+++.++..+.|++|
T Consensus 653 Lk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~ 731 (903)
T PRK15122 653 LRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLA 731 (903)
T ss_pred HHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHH
Confidence 99999999999 99999999999999999999999999999999999999999999999998888777777766689999
Q ss_pred HHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccc--cccch
Q psy16789 422 MQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS--KRDTT 499 (608)
Q Consensus 422 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t 499 (608)
.|+||+|+++|. |++++++|||++++| +||++++.+++++.++...+..+++ .++.++++++.+..+... ...+|
T Consensus 732 ~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~t 808 (903)
T PRK15122 732 IHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSIF-DITTFALMWFVFAANSVEMQALFQS 808 (903)
T ss_pred HHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhccCcHhhhhhhHH
Confidence 999999999996 899999999999999 9999999999998777544433333 333333322221111101 12347
Q ss_pred hhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccc--cccccccccCChhHHHHHHHHHHH
Q psy16789 500 MTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPP--LQKVFQTEALTINDIAFLTALTST 577 (608)
Q Consensus 500 ~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~--l~~~f~~~~l~~~~w~~~~~~~~~ 577 (608)
..|.+++++|+++++++|+.+. ++|.|++.+..+.++++++++++|+|+ ++.+|++.|+++.+|++++++++.
T Consensus 809 ~~f~~l~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~ 883 (903)
T PRK15122 809 GWFIEGLLSQTLVVHMLRTQKI-----PFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLG 883 (903)
T ss_pred HHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 7899999999999999999754 345677777788888889999999996 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q psy16789 578 VFFVSEIKKAIERICER 594 (608)
Q Consensus 578 ~~~~~~l~K~~~r~~~~ 594 (608)
.+++.++.|.+..+..+
T Consensus 884 ~~~~~e~~k~~~~r~~~ 900 (903)
T PRK15122 884 YCLVAQGMKRFYIRRFG 900 (903)
T ss_pred HHHHHHHHHHHHhhhcc
Confidence 99999999965554443
|
|
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-77 Score=629.01 Aligned_cols=514 Identities=29% Similarity=0.449 Sum_probs=454.6
Q ss_pred CCCchHHHHHHHHhhhhhceeeeCC---------ccccCchHHHHHHHHHhc-C-chhhhhhccccccccccccccccee
Q psy16789 29 IRSKPETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKF-G-LYAVNEHYVRLKEYPFSSEQKMMAV 97 (608)
Q Consensus 29 ~~~~~~~~~ll~~~~l~n~a~~~~~---------~~~G~pte~All~~~~~~-g-~~~~~~~~~~v~~~pF~s~~k~m~v 97 (608)
...++.+.++++++++||.|.+..+ ...||+.|.||+.++... | ...+|++++.+.++||+|++|+...
T Consensus 408 ~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqls 487 (1019)
T KOG0203|consen 408 DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLS 487 (1019)
T ss_pred cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEE
Confidence 4456788899999999999998754 357999999999999755 3 3689999999999999999999999
Q ss_pred eecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHH
Q psy16789 98 RCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMM 176 (608)
Q Consensus 98 ~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m 176 (608)
++..++.. +...++.+||++| ++..|++-.+ ...+.|.|.+.+..
T Consensus 488 ih~~~d~~---~~~~~l~mKGape~il~~CSTi~i-------------------------------~g~e~pld~~~~~~ 533 (1019)
T KOG0203|consen 488 IHETEDPS---DPRFLLVMKGAPERILDRCSTILI-------------------------------NGEEKPLDEKLKEA 533 (1019)
T ss_pred EEecCCCC---CccceeeecCChHHHHhhccceee-------------------------------cCCCCCcCHHHHHH
Confidence 88765432 4567889999999 9999998322 23345555554443
Q ss_pred HhHhhhcCCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEcc-------------------CCCCceEEEEeeecCC
Q psy16789 177 AVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGS-------------------NLQDLCYMGLVGICDP 237 (608)
Q Consensus 177 ~v~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~-------------------~e~~l~~~G~~~~~d~ 237 (608)
. ++.+.++...|.||+++|++. ...+|.|+|++++-||
T Consensus 534 f-----------------------~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idP 590 (1019)
T KOG0203|consen 534 F-----------------------QEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDP 590 (1019)
T ss_pred H-----------------------HHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCC
Confidence 3 336677778888888877651 2478999999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC------------------------CCccccchhhcccC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI------------------------HGKVLSGDQIDQMT 293 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~------------------------~~~vi~g~~~~~~~ 293 (608)
||..+|+++.+|++|||+++|+|||++.||+++|++.||... ...|++|.++.+++
T Consensus 591 PR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~ 670 (1019)
T KOG0203|consen 591 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMS 670 (1019)
T ss_pred CcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccC
Confidence 999999999999999999999999999999999999997432 14578999999999
Q ss_pred HHHHHHHhhcc--eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC
Q psy16789 294 EHQLQQVVNSV--TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD 371 (608)
Q Consensus 294 ~~~~~~~~~~~--~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~ 371 (608)
.+++++++.+. .||||.||+||..||+.||+.|..|+++|||.||+||+|+||||||||..|++++|++||+++.|+|
T Consensus 671 ~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDN 750 (1019)
T KOG0203|consen 671 SEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 750 (1019)
T ss_pred HHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCc
Confidence 99999999875 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCcccccc
Q psy16789 372 FNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQ 451 (608)
Q Consensus 372 ~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 451 (608)
|.+|+..+++||.+|+|++|.+.|.+++|+..+.+.+++.+++.|.|+.++++|.+++.+|.+|+++|+||+|+.++|++
T Consensus 751 FASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r 830 (1019)
T KOG0203|consen 751 FASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLR 830 (1019)
T ss_pred chhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCCCCcchHHHHH-HHHHHHHHHHHHHHhhhhccccccccc----------------------------------
Q psy16789 452 KPRN-VKEPMITRALVVN-VLMSASIIIVGTLYVFKREMSDNIVSK---------------------------------- 495 (608)
Q Consensus 452 ~P~~-~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 495 (608)
+||+ +++.++|.+.+.. +...|.+++++.|+.|+..+..++..|
T Consensus 831 ~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~l 910 (1019)
T KOG0203|consen 831 PPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYL 910 (1019)
T ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHH
Confidence 9998 6789999887665 666788998888888776543332211
Q ss_pred --ccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChhHHHHHHH
Q psy16789 496 --RDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTA 573 (608)
Q Consensus 496 --~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~~w~~~~~ 573 (608)
..+|..|.+++.+|++.++.+++++.++|+++ ++||.+++++++-+++..++.|.|++...+++.|+.+.+|+..+.
T Consensus 911 e~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqG-mrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P 989 (1019)
T KOG0203|consen 911 EYTCYTAFFISIVVVQWADLIICKTRRNSIFQQG-MRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFP 989 (1019)
T ss_pred HHhhhhheeeeehHHhHhhHHhhhcchhHHHHhh-hhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEeccc
Confidence 13577789999999999999999999999988 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy16789 574 LTSTVFFVSEIKKAIERICERKCLRSS 600 (608)
Q Consensus 574 ~~~~~~~~~~l~K~~~r~~~~~~~~~~ 600 (608)
++++.++.+|+.|++.|+++..|.++-
T Consensus 990 ~~ilIfvydE~Rk~~IR~~P~gw~e~e 1016 (1019)
T KOG0203|consen 990 FGILIFVYDEVRKLFIRRYPGGWLEKE 1016 (1019)
T ss_pred ceeeeeeHHHHHhHhhhhCCCchhhhh
Confidence 999999999999999999999998863
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-74 Score=651.78 Aligned_cols=512 Identities=22% Similarity=0.294 Sum_probs=414.6
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cch--hhhh---ccccceeeeccccC
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRL--LEVG---CVCNNASIIGDSLL 137 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~--~ei~---~lc~~a~~~~~~~~ 137 (608)
..+...|..++.++...+++++..++.+.++++|.|||||+|+|++.+... .|. .+++ .+|+. . +...
T Consensus 342 t~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~--~--~~~~ 417 (902)
T PRK10517 342 TSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSH--Y--QTGL 417 (902)
T ss_pred HHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCC--c--CCCC
Confidence 344455666788999999999999999999999999999999999877543 222 2222 22221 1 1236
Q ss_pred CCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhc--CCcCCCCchhHHHHhhhh--------------
Q psy16789 138 GQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKI--GHNLPSKRDGKMILSQSC-------------- 201 (608)
Q Consensus 138 gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~--~~~~~~kg~~~~~~~~~~-------------- 201 (608)
|||+|.|+++++++.+.....+.|+...++|||+++|+|++++++. .+..++||+++.+++.|.
T Consensus 418 ~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 497 (902)
T PRK10517 418 KNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDI 497 (902)
T ss_pred CCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHH
Confidence 9999999999988754333445788899999999999999987532 244689999998887653
Q ss_pred ------hhhHHHhhccCceEEEEEcc-----------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcH
Q psy16789 202 ------SEYPKFQTLGKGLVAMARGS-----------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQ 264 (608)
Q Consensus 202 ------~~~~~~~~~g~r~l~~a~~~-----------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~ 264 (608)
+..++++++|+||+++||++ .|+|++|+|+++++||+|++++++|++|+++||+++|+|||++
T Consensus 498 ~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~ 577 (902)
T PRK10517 498 MLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSE 577 (902)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 22467899999999999974 3679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHh
Q psy16789 265 ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 265 ~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~ 344 (608)
.||.++|+++||. .+.+++|.+++.++++++.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++
T Consensus 578 ~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ 655 (902)
T PRK10517 578 LVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRA 655 (902)
T ss_pred HHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHh
Confidence 9999999999995 35699999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHH
Q psy16789 345 ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424 (608)
Q Consensus 345 A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (608)
|||||||+ +|++.||++||+++.+++|.++.+++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|+|+
T Consensus 656 ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qi 734 (902)
T PRK10517 656 ADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHL 734 (902)
T ss_pred CCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999888888777754479999999
Q ss_pred HHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccc--cccchhhH
Q psy16789 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS--KRDTTMTF 502 (608)
Q Consensus 425 l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~f 502 (608)
||+|+++| +|+++++++|+++++|++||+ ++...+.+.++...+..+++. ++.|+++++.+...... ...++..|
T Consensus 735 L~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~F 811 (902)
T PRK10517 735 LIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLGRFMVFFGPISSIFD-ILTFCLMWWVFHANTPETQTLFQSGWF 811 (902)
T ss_pred HHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccccchhhHhHHHHHHH
Confidence 99999999 679999999999999999987 232233333333333333222 22222222221111000 11233459
Q ss_pred HHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhccc--ccccccccccCC--hhHHHHHHHHHHHH
Q psy16789 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFP--PLQKVFQTEALT--INDIAFLTALTSTV 578 (608)
Q Consensus 503 ~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p--~l~~~f~~~~l~--~~~w~~~~~~~~~~ 578 (608)
..++++|+++++++|+.+. ++|+|++.+..++.+++++++++++| +++.+|++.+++ +..|+++++++..
T Consensus 812 ~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~- 885 (902)
T PRK10517 812 VVGLLSQTLIVHMIRTRRI-----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM- 885 (902)
T ss_pred HHHHHHHHHHHHhhccCCC-----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH-
Confidence 9999999999999998643 45688999999999999999999988 889999999999 4556665555544
Q ss_pred HHHHHHHHHHHHhhhh
Q psy16789 579 FFVSEIKKAIERICER 594 (608)
Q Consensus 579 ~~~~~l~K~~~r~~~~ 594 (608)
++.++.|.++.+..+
T Consensus 886 -~~~e~~K~~~~~~~~ 900 (902)
T PRK10517 886 -TLTQLVKGFYSRRYG 900 (902)
T ss_pred -HHHHHHHHHHHHhhc
Confidence 667887765444333
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-72 Score=641.39 Aligned_cols=510 Identities=20% Similarity=0.284 Sum_probs=414.7
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cch--hhhhc---cccceeeeccccC
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRL--LEVGC---VCNNASIIGDSLL 137 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~--~ei~~---lc~~a~~~~~~~~ 137 (608)
..+...|..++.++...+++.+.-++.+.++++|.|||||+|+|++.+..+ .|. .+++. +|+. . +...
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~--~--~~~~ 382 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSY--F--QTGW 382 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCC--C--CCCC
Confidence 344455566788999999999999999999999999999999998877543 232 22222 2221 1 1235
Q ss_pred CCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHHHhhhh--------------
Q psy16789 138 GQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMILSQSC-------------- 201 (608)
Q Consensus 138 gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~~~~~~-------------- 201 (608)
+||+|.|+++++.+......+.+|+..+++||||++|+|++++++.+ ...+.||+++.+++.|.
T Consensus 383 ~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 462 (867)
T TIGR01524 383 KNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSES 462 (867)
T ss_pred CChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHH
Confidence 79999999999886533334457788999999999999999876533 34689999998876542
Q ss_pred ------hhhHHHhhccCceEEEEEcc-----------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcH
Q psy16789 202 ------SEYPKFQTLGKGLVAMARGS-----------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQ 264 (608)
Q Consensus 202 ------~~~~~~~~~g~r~l~~a~~~-----------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~ 264 (608)
+.+++++++|+|++++|+++ .|++|+|+|+++++||+|++++++|++|+++||+++|+|||++
T Consensus 463 ~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~ 542 (867)
T TIGR01524 463 EKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542 (867)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 34567899999999999974 3678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHh
Q psy16789 265 ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 265 ~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~ 344 (608)
.||.++|+++||.. +.+++|.+++.++++++.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++
T Consensus 543 ~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~ 620 (867)
T TIGR01524 543 IVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRK 620 (867)
T ss_pred HHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHh
Confidence 99999999999964 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHH
Q psy16789 345 ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424 (608)
Q Consensus 345 A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (608)
|||||||+ +|++.+|++||+++.+++|..+.+++++||++|+|+++++.|.++.|+..++..+++.++..+.|++|.|+
T Consensus 621 AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qi 699 (867)
T TIGR01524 621 ADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHL 699 (867)
T ss_pred CCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999888888777766689999999
Q ss_pred HHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccccccc--ccccchhhH
Q psy16789 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIV--SKRDTTMTF 502 (608)
Q Consensus 425 l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~t~~f 502 (608)
+|+|+++| +|+++++++||++++|++||+ ++.+.+.+.++...+..+++ .++.++++++....... ....+|..|
T Consensus 700 l~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~t~~f 776 (867)
T TIGR01524 700 LIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRFMLCIGPVSSIF-DIATFLLMWFVFSANTVEEQALFQSGWF 776 (867)
T ss_pred HHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccchhhhhHHHHHHH
Confidence 99999999 699999999999999986665 66654444433332222222 22222222211111100 112367789
Q ss_pred HHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccc--cccccccccCChh--HHHHHHHHHHHH
Q psy16789 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPP--LQKVFQTEALTIN--DIAFLTALTSTV 578 (608)
Q Consensus 503 ~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~--l~~~f~~~~l~~~--~w~~~~~~~~~~ 578 (608)
..++++|+++++++|+.+. ++|.|++.+.+++++++++++++++|+ ++.+|++.|+|+. .|++++++++
T Consensus 777 ~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~-- 849 (867)
T TIGR01524 777 VVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY-- 849 (867)
T ss_pred HHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHH--
Confidence 9999999999999998644 456799999999999999999999997 4889999988655 4555554444
Q ss_pred HHHHHHHHHHHHhh
Q psy16789 579 FFVSEIKKAIERIC 592 (608)
Q Consensus 579 ~~~~~l~K~~~r~~ 592 (608)
+++.++.|++..+.
T Consensus 850 ~~~~e~~k~~~~~~ 863 (867)
T TIGR01524 850 MATMQLVKTFYIRR 863 (867)
T ss_pred HHHHHHHHHHHHHh
Confidence 46778888655444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-69 Score=630.03 Aligned_cols=494 Identities=20% Similarity=0.268 Sum_probs=406.7
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccc---------------------hhh
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHR---------------------LLE 121 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg---------------------~~e 121 (608)
+.+..+...+..++.++...+++.+..+..+..+++|.|||||+|+|++.+.-+.. ...
T Consensus 416 ~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1054)
T TIGR01657 416 AELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHK 495 (1054)
T ss_pred HHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHH
Confidence 34455666667888999999999999999999999999999999998876643210 011
Q ss_pred hhccccceeeeccccCCCccHHHHHHHHHHcCcc-c----------------cccccccceeeeCChHHHHHHhHhhhcC
Q psy16789 122 VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLY-A----------------VNEHYVRLKEYPFSSEQKMMAVRVHKIG 184 (608)
Q Consensus 122 i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~-~----------------~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 184 (608)
+++.||++...++...|||+|.|+++++.+.... . ...+|++++++||+|++|||+++++..+
T Consensus 496 ~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~ 575 (1054)
T TIGR01657 496 ALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTND 575 (1054)
T ss_pred HHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcC
Confidence 6789999887777889999999999987542111 0 0246788999999999999999987533
Q ss_pred ---CcCCCCchhHHHHhhhh---------hhhHHHhhccCceEEEEEcc----------------CCCCceEEEEeeecC
Q psy16789 185 ---HNLPSKRDGKMILSQSC---------SEYPKFQTLGKGLVAMARGS----------------NLQDLCYMGLVGICD 236 (608)
Q Consensus 185 ---~~~~~kg~~~~~~~~~~---------~~~~~~~~~g~r~l~~a~~~----------------~e~~l~~~G~~~~~d 236 (608)
...++||++|.+++.|. +.+++|+++|+|||++|||+ .|+||+|+|+++++|
T Consensus 576 ~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d 655 (1054)
T TIGR01657 576 ERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFEN 655 (1054)
T ss_pred CCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEec
Confidence 23699999999998664 46788999999999999984 267999999999999
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC-----------------------------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG----------------------------------- 281 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~----------------------------------- 281 (608)
|+|++++++|++|+++||+++|+|||++.||.++|+++||..+..
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEI 735 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccc
Confidence 999999999999999999999999999999999999999964331
Q ss_pred ------------------ccccchhhcc---cCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHH
Q psy16789 282 ------------------KVLSGDQIDQ---MTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGV 340 (608)
Q Consensus 282 ------------------~vi~g~~~~~---~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~ 340 (608)
.+++|++++. ..++++.+.+.++.||||++|+||.++|+.+|+.|+.|+|||||.||++
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ 815 (1054)
T TIGR01657 736 PYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCG 815 (1054)
T ss_pred cCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 3566766654 4557888999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchh
Q psy16789 341 ALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLN 420 (608)
Q Consensus 341 al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (608)
|||+|||||||+ ++ + |+.+||+++.+++|+++.++|++||+++.|+++.++|.+..++.......+ ++..+.|++
T Consensus 816 ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~ 890 (1054)
T TIGR01657 816 ALKQADVGISLS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLG 890 (1054)
T ss_pred HHHhcCcceeec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCc
Confidence 999999999998 33 3 457999999999999999999999999999999999999988876544433 334458899
Q ss_pred HHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccc--------
Q psy16789 421 AMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNI-------- 492 (608)
Q Consensus 421 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 492 (608)
++|++|+|++++.+++++++.++|++++|++|| ..+++++.++.+++.+++++.++.++.+......+.
T Consensus 891 ~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1054)
T TIGR01657 891 DGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVD 967 (1054)
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCC
Confidence 999999999999999999999999999999998 468999999999999999888777666654322111
Q ss_pred -----cccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHH-HHh-cccccccccccccCCh
Q psy16789 493 -----VSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQL-FVI-YFPPLQKVFQTEALTI 565 (608)
Q Consensus 493 -----~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~-~ii-~~p~l~~~f~~~~l~~ 565 (608)
.....+|++|... ..+.+..+.+++. .++|+.++++|+++++++++++++++ +++ +.|+++..|++.|+|.
T Consensus 968 ~~~~~~~~~~~T~~f~~~-~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 968 LEKENFPNLLNTVLFFVS-SFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred cccccCccHHHHHHHHHH-HHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 0011247777444 4455555666664 77899999999999999888777665 333 6889999999999986
Q ss_pred h
Q psy16789 566 N 566 (608)
Q Consensus 566 ~ 566 (608)
.
T Consensus 1046 ~ 1046 (1054)
T TIGR01657 1046 E 1046 (1054)
T ss_pred H
Confidence 4
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-64 Score=590.13 Aligned_cols=507 Identities=18% Similarity=0.203 Sum_probs=388.5
Q ss_pred cccccccccccccccceeeecCCCCCccccceEEEEc--------c-------------c--------------------
Q psy16789 80 YVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--------H-------------R-------------------- 118 (608)
Q Consensus 80 ~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--------k-------------g-------------------- 118 (608)
...++..+-.++.+.++++|.|||||+|+|.+.+..+ + +
T Consensus 344 ~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (1057)
T TIGR01652 344 PASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVD 423 (1057)
T ss_pred cceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCc
Confidence 3688999999999999999999999999988766432 0 0
Q ss_pred ----------------hhh---hhccccceeeec--cc------cCCCccHHHHHHHHHHcCccc---------------
Q psy16789 119 ----------------LLE---VGCVCNNASIIG--DS------LLGQPTEGALLAAGMKFGLYA--------------- 156 (608)
Q Consensus 119 ----------------~~e---i~~lc~~a~~~~--~~------~~gdp~E~Al~~~~~~~~~~~--------------- 156 (608)
..+ ++++||++.... +. ..|||+|.||+++|+..|+..
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~ 503 (1057)
T TIGR01652 424 PRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMH 503 (1057)
T ss_pred HHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeC
Confidence 112 568999987652 21 258999999999999988632
Q ss_pred -cccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHHHhhhh-----------hhhHHHhhccCceEEEEEcc-
Q psy16789 157 -VNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMILSQSC-----------SEYPKFQTLGKGLVAMARGS- 221 (608)
Q Consensus 157 -~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~~~~~~-----------~~~~~~~~~g~r~l~~a~~~- 221 (608)
...+|++++++||+|+||||++++++.+ ..+++|||++.+++.|+ +.+++|+++|+||+++|+|.
T Consensus 504 ~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l 583 (1057)
T TIGR01652 504 GETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYREL 583 (1057)
T ss_pred CCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEEC
Confidence 1246899999999999999999998643 34699999998887654 34678999999999999973
Q ss_pred --------------------------------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHH
Q psy16789 222 --------------------------------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATA 269 (608)
Q Consensus 222 --------------------------------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ 269 (608)
+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+.+||.+
T Consensus 584 ~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~ 663 (1057)
T TIGR01652 584 SEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAIN 663 (1057)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHH
Confidence 268999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCC-----------------------------------------ccccchhhcccCHH----HHHHHhhcc
Q psy16789 270 IASMVGLDTIHG-----------------------------------------KVLSGDQIDQMTEH----QLQQVVNSV 304 (608)
Q Consensus 270 ia~~~gi~~~~~-----------------------------------------~vi~g~~~~~~~~~----~~~~~~~~~ 304 (608)
+|++||+...+. .+++|++++...++ ++.+.+.++
T Consensus 664 IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~ 743 (1057)
T TIGR01652 664 IGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKC 743 (1057)
T ss_pred HHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhC
Confidence 999999976542 26777777644433 344455555
Q ss_pred e--EEEEeCchhHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH-H
Q psy16789 305 T--VFYRVTPRHKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI-E 380 (608)
Q Consensus 305 ~--v~~r~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i-~ 380 (608)
. ||||++|+||.++|+.+|+. |++|+|+|||.||++||++|||||++.+.+..+|+.+||+++. +|..+.+++ .
T Consensus 744 ~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~ 821 (1057)
T TIGR01652 744 KAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLV 821 (1057)
T ss_pred CEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHh
Confidence 4 99999999999999999998 9999999999999999999999999875666689999999997 599999987 8
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHhhhhHhhhcc--CCCCccccccCCC-
Q psy16789 381 EGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRI---PNPLNAMQILWINIIMDGPPAQSLGV--EPVDDDVKIQKPR- 454 (608)
Q Consensus 381 ~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~P~- 454 (608)
|||++|.|+++++.|.+++|+..+++.+++.++.. .+++++++++|+|++++.+|+++++. +++++++|.++|+
T Consensus 822 ~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~l 901 (1057)
T TIGR01652 822 HGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQL 901 (1057)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHH
Confidence 99999999999999999999998888877766533 35799999999999999999999976 5677889999997
Q ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccc--------cccchhhHHHHHHHHHHHHHHhhccccce
Q psy16789 455 ---NVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS--------KRDTTMTFTCFVFFDMFNALSCRSQIKSV 523 (608)
Q Consensus 455 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~t~~f~~lv~~~l~~~~~~~~~~~~~ 523 (608)
.++.++++.+.++.|++.|++++++.+++.+..+..+... ....++.|.++++...+.++...
T Consensus 902 y~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 975 (1057)
T TIGR01652 902 YREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEI------ 975 (1057)
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHH------
Confidence 5678899999999999999998877766544433221100 01112233333332222222111
Q ss_pred eeeCCccchHHHHHHHHHHHHHHHHh-ccc---ccccc---cccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy16789 524 FTIGLFTNKMFLFAVCASVVGQLFVI-YFP---PLQKV---FQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKC 596 (608)
Q Consensus 524 f~~~~~~N~~~~~~~~~~i~~~~~ii-~~p---~l~~~---f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~ 596 (608)
. .++++.++++.+++++.+++. .++ .-... +...-.++.+|+.+++..+++++++.++|.+++.+.+..
T Consensus 976 ---~-~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~ 1051 (1057)
T TIGR01652 976 ---N-RWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPD 1051 (1057)
T ss_pred ---h-HhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 1 223333333333433332221 111 10111 112223577999999999999999999999999887764
Q ss_pred hh
Q psy16789 597 LR 598 (608)
Q Consensus 597 ~~ 598 (608)
.+
T Consensus 1052 ~~ 1053 (1057)
T TIGR01652 1052 YD 1053 (1057)
T ss_pred HH
Confidence 33
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-63 Score=554.78 Aligned_cols=463 Identities=22% Similarity=0.326 Sum_probs=374.2
Q ss_pred HHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEcc----ch--hh---hhccccceeeeccc
Q psy16789 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLH----RL--LE---VGCVCNNASIIGDS 135 (608)
Q Consensus 65 l~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~k----g~--~e---i~~lc~~a~~~~~~ 135 (608)
+..+...|..++.++...+++.+.-++.+.++++|.|||||+|+|++.+..+. +. .+ ..++|+. .
T Consensus 256 ~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~------~ 329 (755)
T TIGR01647 256 LSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASR------E 329 (755)
T ss_pred HHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCC------C
Confidence 34445556678889999999999999999999999999999999987765431 11 12 2233432 3
Q ss_pred cCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhc---CCcCCCCchhHHHHhhh----------hh
Q psy16789 136 LLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKI---GHNLPSKRDGKMILSQS----------CS 202 (608)
Q Consensus 136 ~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~---~~~~~~kg~~~~~~~~~----------~~ 202 (608)
..+||+|.|+++++.+.+ ..+..|+..+.+||++.+|+|++++++. +...+.||+++.+++.| .+
T Consensus 330 ~~~~pi~~Ai~~~~~~~~--~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~ 407 (755)
T TIGR01647 330 EDQDAIDTAVLGSAKDLK--EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEE 407 (755)
T ss_pred CCCChHHHHHHHHHHHhH--HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHH
Confidence 458999999999987643 2234577888999999999999887642 23347899999888765 33
Q ss_pred hhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC---
Q psy16789 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI--- 279 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~--- 279 (608)
.+++++++|+|++++|+++.|++|+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||...
T Consensus 408 ~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~ 487 (755)
T TIGR01647 408 KVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYT 487 (755)
T ss_pred HHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcC
Confidence 45778999999999999887899999999999999999999999999999999999999999999999999999753
Q ss_pred CCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHH
Q psy16789 280 HGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVC 359 (608)
Q Consensus 280 ~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a 359 (608)
...+.+|++.+.++++++.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||+ +|++.+
T Consensus 488 ~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvA 566 (755)
T TIGR01647 488 ADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAA 566 (755)
T ss_pred HHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHH
Confidence 1234455555678889999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred HhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhh
Q psy16789 360 KEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSL 439 (608)
Q Consensus 360 ~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 439 (608)
|++||+++.+++|.++.+++++||++|+|+++++.|.++.|+..+++.+++.++. +.|++|+|++|+|+++|. +++++
T Consensus 567 keaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~-~~~l~~~~il~~~l~~d~-~~~~l 644 (755)
T TIGR01647 567 RSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILIL-NFYFPPIMVVIIAILNDG-TIMTI 644 (755)
T ss_pred HHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh-CcchhHHHHHHHHHHHhH-hHhhc
Confidence 9999999999999999999999999999999999999999999887766666532 245999999999999997 59999
Q ss_pred ccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc------ccc---cccccchhhHHHHHHHHH
Q psy16789 440 GVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMS------DNI---VSKRDTTMTFTCFVFFDM 510 (608)
Q Consensus 440 ~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~t~~f~~lv~~~l 510 (608)
+++++++. ++|+.+ .+. .++..++..|.+..+..++.+++.+. ... .....+|+.|..++++|+
T Consensus 645 ~~~~~~~~---~~p~~~---~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~ 717 (755)
T TIGR01647 645 AYDNVKPS---KLPQRW---NLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQ 717 (755)
T ss_pred cCCCCCCC---CCCCcc---chH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHH
Confidence 99988742 344333 343 56666777777766665555544331 111 123578999999999999
Q ss_pred HHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHH
Q psy16789 511 FNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFV 548 (608)
Q Consensus 511 ~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~i 548 (608)
++++++|+.+.+.++ ..+++++.+.++.+++..++
T Consensus 718 ~~~~~~r~~~~~~~~---~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 718 ATIFVTRTHGFFWSE---RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred HHHheeccCCCCccc---CCcHHHHHHHHHHHHHHHHH
Confidence 999999997654332 35666666666665554443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-60 Score=546.18 Aligned_cols=503 Identities=17% Similarity=0.182 Sum_probs=374.7
Q ss_pred ccccccccccccccceeeecCCCCCccccceEEEEc--------c-----------------c-----------------
Q psy16789 81 VRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--------H-----------------R----------------- 118 (608)
Q Consensus 81 ~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--------k-----------------g----------------- 118 (608)
..++...-+++++....++.|||||+|+|.|.+..+ + +
T Consensus 439 ~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1178)
T PLN03190 439 FQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLE 518 (1178)
T ss_pred ceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHh
Confidence 357888999999999999999999999997765321 0 0
Q ss_pred -------------hhh---hhccccceeee--cc----------ccCCCccHHHHHHHHHHcCcc--------------c
Q psy16789 119 -------------LLE---VGCVCNNASII--GD----------SLLGQPTEGALLAAGMKFGLY--------------A 156 (608)
Q Consensus 119 -------------~~e---i~~lc~~a~~~--~~----------~~~gdp~E~Al~~~~~~~~~~--------------~ 156 (608)
..+ ++++||++... ++ ...+||||.||+++|.+.|+. .
T Consensus 519 ~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~ 598 (1178)
T PLN03190 519 LSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG 598 (1178)
T ss_pred hhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeecc
Confidence 012 57899998763 11 123499999999999998861 2
Q ss_pred cccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHHHhhhh------------hhhHHHhhccCceEEEEEcc-
Q psy16789 157 VNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMILSQSC------------SEYPKFQTLGKGLVAMARGS- 221 (608)
Q Consensus 157 ~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~~~~~~------------~~~~~~~~~g~r~l~~a~~~- 221 (608)
.+.+|+.++++||+|+||||+|++++++ ..+++|||++.+++.|. +.+++|+++|+|||++|||.
T Consensus 599 ~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l 678 (1178)
T PLN03190 599 ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMREL 678 (1178)
T ss_pred ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeC
Confidence 4568999999999999999999997543 34699999999887653 45788999999999999983
Q ss_pred --------------------------------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHH
Q psy16789 222 --------------------------------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATA 269 (608)
Q Consensus 222 --------------------------------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ 269 (608)
+|+||+++|+++++|++|++++++|+.|+++||++||+|||+.+||.+
T Consensus 679 ~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~ 758 (1178)
T PLN03190 679 NDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAIS 758 (1178)
T ss_pred CHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence 268999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCC-------------------------------------------------ccccchhhcccCH----HH
Q psy16789 270 IASMVGLDTIHG-------------------------------------------------KVLSGDQIDQMTE----HQ 296 (608)
Q Consensus 270 ia~~~gi~~~~~-------------------------------------------------~vi~g~~~~~~~~----~~ 296 (608)
||++||+..++. .+++|.+++.+.+ ++
T Consensus 759 IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~ 838 (1178)
T PLN03190 759 IGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQ 838 (1178)
T ss_pred HHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHH
Confidence 999999964431 3556666665543 45
Q ss_pred HHHHhhcce--EEEEeCchhHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcc
Q psy16789 297 LQQVVNSVT--VFYRVTPRHKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFN 373 (608)
Q Consensus 297 ~~~~~~~~~--v~~r~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~ 373 (608)
+.++..++. ||||++|.||+++|+.+|+. +.+|+|+|||+||++||++|||||++.+.++.+|+.+|||++. .|.
T Consensus 839 f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr 916 (1178)
T PLN03190 839 LFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFR 916 (1178)
T ss_pred HHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhH
Confidence 566666655 79999999999999999997 5889999999999999999999999987888899999999997 566
Q ss_pred hHHHHH-HHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHhhhhHhhhcc-C--CCCc
Q psy16789 374 TIIAAI-EEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRI---PNPLNAMQILWINIIMDGPPAQSLGV-E--PVDD 446 (608)
Q Consensus 374 ~i~~~i-~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~l~~-~--~~~~ 446 (608)
-+.+++ .|||+.|.|+.+.+.|.+++|++..++.+.+.++.. .+.+.++.+.++|++++.+|.++++. + -+++
T Consensus 917 ~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~ 996 (1178)
T PLN03190 917 FLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRR 996 (1178)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHH
Confidence 677666 499999999999999999999998888887766544 35678899999999999999999966 2 2344
Q ss_pred cccccCCC---CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccc-cccchhhHHHHHHHHHHHHHHhhccccc
Q psy16789 447 DVKIQKPR---NVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS-KRDTTMTFTCFVFFDMFNALSCRSQIKS 522 (608)
Q Consensus 447 ~~~~~~P~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~f~~lv~~~l~~~~~~~~~~~~ 522 (608)
.+++.|-. .++...++.+.|+.|++.|++++++.|++.+..+...... ....++.+.+.++..-+.++...
T Consensus 997 ~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~----- 1071 (1178)
T PLN03190 997 TLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDI----- 1071 (1178)
T ss_pred HHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHH-----
Confidence 44444322 2356789999999999999999887776655443222111 01112222222222211111111
Q ss_pred eeeeCCccchHHHHHHHHHHHHHH----HHhcccccccccc--cccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy16789 523 VFTIGLFTNKMFLFAVCASVVGQL----FVIYFPPLQKVFQ--TEALTINDIAFLTALTSTVFFVSEIKKAIERICERK 595 (608)
Q Consensus 523 ~f~~~~~~N~~~~~~~~~~i~~~~----~ii~~p~l~~~f~--~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~ 595 (608)
. .++++.++++.+++++.+ ++..+|....++. ...-++.+|+.++++.+++++++.++|.++|.+.+.
T Consensus 1072 ----~-~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~ 1145 (1178)
T PLN03190 1072 ----I-RWNWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPC 1145 (1178)
T ss_pred ----h-hhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 123332233333333222 2222332222111 112357789999999999999999999998877664
|
|
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-56 Score=471.36 Aligned_cols=508 Identities=19% Similarity=0.277 Sum_probs=377.1
Q ss_pred hhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc-----------------------------cc--hh--
Q psy16789 74 YAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL-----------------------------HR--LL-- 120 (608)
Q Consensus 74 ~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~-----------------------------kg--~~-- 120 (608)
.+++++....-...-.-.-+...+.|.|||||+|+++-.+.-+ ++ .+
T Consensus 447 ~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 526 (1140)
T KOG0208|consen 447 SRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMG 526 (1140)
T ss_pred HHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchH
Confidence 3444444333222222334678899999999999775433221 11 11
Q ss_pred --h-hhccccceeeeccccCCCccHHHHHHHHHHcCcc----c--------------------------cc-ccccccee
Q psy16789 121 --E-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLY----A--------------------------VN-EHYVRLKE 166 (608)
Q Consensus 121 --e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~----~--------------------------~~-~~~~~~~~ 166 (608)
- .++.||.....++++.|||.|..+++...+.-.+ . .. .++.+++.
T Consensus 527 ~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~ 606 (1140)
T KOG0208|consen 527 NLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQ 606 (1140)
T ss_pred HHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEe
Confidence 1 5688998888899999999999999876652210 0 00 14778899
Q ss_pred eeCChHHHHHHhHhhhcCCc---CCCCchhHHHHh---------hhhhhhHHHhhccCceEEEEEcc-------------
Q psy16789 167 YPFSSEQKMMAVRVHKIGHN---LPSKRDGKMILS---------QSCSEYPKFQTLGKGLVAMARGS------------- 221 (608)
Q Consensus 167 ~pF~s~~k~m~v~~~~~~~~---~~~kg~~~~~~~---------~~~~~~~~~~~~g~r~l~~a~~~------------- 221 (608)
+||+|..|||||+++.++.+ .+.||++|.+.+ .+++.++.|+.+|+||+|+|+|+
T Consensus 607 feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~ 686 (1140)
T KOG0208|consen 607 FEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLS 686 (1140)
T ss_pred cccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhcc
Confidence 99999999999999865433 499999998876 46778999999999999999983
Q ss_pred ---CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc----------------
Q psy16789 222 ---NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK---------------- 282 (608)
Q Consensus 222 ---~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~---------------- 282 (608)
.|+||+|+|++.+|+++|++++++|++|.+|+||++|+||||..||..+||+||+..+...
T Consensus 687 Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~ 766 (1140)
T KOG0208|consen 687 RDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQ 766 (1140)
T ss_pred HhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCce
Confidence 5899999999999999999999999999999999999999999999999999999554311
Q ss_pred ---------------------------------------cccchhhc---ccCHHHHHHHhhcceEEEEeCchhHHHHHH
Q psy16789 283 ---------------------------------------VLSGDQID---QMTEHQLQQVVNSVTVFYRVTPRHKLTIVK 320 (608)
Q Consensus 283 ---------------------------------------vi~g~~~~---~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~ 320 (608)
.++|+.++ +...+.+.+++.+..|||||+|.||.++|+
T Consensus 767 i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie 846 (1140)
T KOG0208|consen 767 IVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIE 846 (1140)
T ss_pred eEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHH
Confidence 12333332 224567788888999999999999999999
Q ss_pred HHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhH
Q psy16789 321 AFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTS 400 (608)
Q Consensus 321 ~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~ 400 (608)
.+|+.|+.|+|||||+||+.|||+||+||+++.+ +|.-||.++..-.+..++.+.|+|||+.+.....+++| +..
T Consensus 847 ~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea---EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkY--Mal 921 (1140)
T KOG0208|consen 847 ALQKLGYKVGFCGDGANDCGALKAADVGISLSEA---EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKY--MAL 921 (1140)
T ss_pred HHHhcCcEEEecCCCcchhhhhhhcccCcchhhh---hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHH--HHH
Confidence 9999999999999999999999999999999843 44558999998899999999999999999554444444 455
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q psy16789 401 IAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGT 480 (608)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~ 480 (608)
++++.+..+..++.....+++.|.++++++...+.+++++..+|..++-..|| ...+++++.+...+.|.++..+..
T Consensus 922 Ys~iqFisv~~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q 998 (1140)
T KOG0208|consen 922 YSAIQFISVVFLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQ 998 (1140)
T ss_pred HHHHHHHhhheeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHH
Confidence 55555566666777788999999999999999999999999999999988877 456888888888777777766666
Q ss_pred HHhhhhccccccc-----------ccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHh
Q psy16789 481 LYVFKREMSDNIV-----------SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVI 549 (608)
Q Consensus 481 ~~~~~~~~~~~~~-----------~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii 549 (608)
+..+......+.. .....|..|..-.+..+++.+... ..++|+.++|+|+.+...+....+..+.++
T Consensus 999 ~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S--~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~ 1076 (1140)
T KOG0208|consen 999 WILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLS--KGSPFRRPLWKNVLFKVFITVIILSTIYLL 1076 (1140)
T ss_pred HhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeec--cCCcccCchhcCceeeeehhhHHhhhhhhh
Confidence 5554433221111 112335556555555555444332 467899999999988777666666655555
Q ss_pred cccccc---cccccccCChhHH-HHHHHHHHHHHHHHHHHHHHHHh
Q psy16789 550 YFPPLQ---KVFQTEALTINDI-AFLTALTSTVFFVSEIKKAIERI 591 (608)
Q Consensus 550 ~~p~l~---~~f~~~~l~~~~w-~~~~~~~~~~~~~~~l~K~~~r~ 591 (608)
+.+... ..+..++.+-+.. +++++.....+....+.+-..+.
T Consensus 1077 ~~~~~~~~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~~~~~~~~ 1122 (1140)
T KOG0208|consen 1077 FVNYLFIEWKLLQLTYIPTTFDRFIILLVVISYFALNYIQPSVGRM 1122 (1140)
T ss_pred hccccchhhhhhceeccCcchhHHHHHHHHHHHHHHHHhhhhhhch
Confidence 544222 3466777766433 34444444555555555444443
|
|
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-57 Score=507.14 Aligned_cols=509 Identities=18% Similarity=0.221 Sum_probs=376.0
Q ss_pred cccccccccccccceeeecCCCCCccccceEEEEc------------------------------------------c--
Q psy16789 82 RLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL------------------------------------------H-- 117 (608)
Q Consensus 82 ~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~------------------------------------------k-- 117 (608)
..+.-.-+++.+....+..|||||+|+|.|....+ +
T Consensus 374 ~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 453 (1151)
T KOG0206|consen 374 QARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGL 453 (1151)
T ss_pred ccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccc
Confidence 44556667888999999999999999886544210 0
Q ss_pred -----c---hhh---hhccccceeeecc-------ccCCCccHHHHHHHHHHcCccc--------------cccccccce
Q psy16789 118 -----R---LLE---VGCVCNNASIIGD-------SLLGQPTEGALLAAGMKFGLYA--------------VNEHYVRLK 165 (608)
Q Consensus 118 -----g---~~e---i~~lc~~a~~~~~-------~~~gdp~E~Al~~~~~~~~~~~--------------~~~~~~~~~ 165 (608)
+ ..+ .+++||++....+ ....+|+|.|+++.|+..|... ..++|+.++
T Consensus 454 ~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~ 533 (1151)
T KOG0206|consen 454 WSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLN 533 (1151)
T ss_pred cccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEE
Confidence 0 112 6799999877652 2457999999999999988632 246899999
Q ss_pred eeeCChHHHHHHhHhhhcCCc--CCCCchhHHHHhhh-----------hhhhHHHhhccCceEEEEEc------------
Q psy16789 166 EYPFSSEQKMMAVRVHKIGHN--LPSKRDGKMILSQS-----------CSEYPKFQTLGKGLVAMARG------------ 220 (608)
Q Consensus 166 ~~pF~s~~k~m~v~~~~~~~~--~~~kg~~~~~~~~~-----------~~~~~~~~~~g~r~l~~a~~------------ 220 (608)
..||+|.||||||+|+++... +++|||+..+.+++ ++++++|+.+|+||||+|||
T Consensus 534 iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~ 613 (1151)
T KOG0206|consen 534 VLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNE 613 (1151)
T ss_pred EeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHH
Confidence 999999999999999976544 59999998777643 35789999999999999998
Q ss_pred ---------------------cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC
Q psy16789 221 ---------------------SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI 279 (608)
Q Consensus 221 ---------------------~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~ 279 (608)
.+|+||+++|.+++||+++++||++|++|++||||+||+|||+.+||.+|+..|++..+
T Consensus 614 ~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~ 693 (1151)
T KOG0206|consen 614 RYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQ 693 (1151)
T ss_pred HHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCC
Confidence 25899999999999999999999999999999999999999999999999999999655
Q ss_pred C-----------------------------------------------CccccchhhcccCHHH----HHHHh--hcceE
Q psy16789 280 H-----------------------------------------------GKVLSGDQIDQMTEHQ----LQQVV--NSVTV 306 (608)
Q Consensus 280 ~-----------------------------------------------~~vi~g~~~~~~~~~~----~~~~~--~~~~v 306 (608)
+ +.+++|+++....+.+ +.+.. .+..+
T Consensus 694 ~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sVi 773 (1151)
T KOG0206|consen 694 DMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVI 773 (1151)
T ss_pred CceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEE
Confidence 3 2344444443322221 12222 23459
Q ss_pred EEEeCchhHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHH
Q psy16789 307 FYRVTPRHKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGI 385 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~ 385 (608)
|||++|.||+.+|+..++. +..+++||||+||++||+.|||||++++.++.+|..+||+.+....|.....++ |||+.
T Consensus 774 CCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~ 852 (1151)
T KOG0206|consen 774 CCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWS 852 (1151)
T ss_pred EccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee-eccee
Confidence 9999999999999999854 889999999999999999999999999999999999999999877766655444 99999
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHh---cCCCchhHHHHHHHHHHHhhhhHhhhcc--CCCCccccccCCC----CC
Q psy16789 386 FYNIRNFVRFQLSTSIAALSLIALATLL---RIPNPLNAMQILWINIIMDGPPAQSLGV--EPVDDDVKIQKPR----NV 456 (608)
Q Consensus 386 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~P~----~~ 456 (608)
|.|+.+++.|.+++|+...+..+.+.++ +....+.++++.++|++++.+|.+.+|. .+.+...+.+.|. ..
T Consensus 853 Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~ 932 (1151)
T KOG0206|consen 853 YIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQ 932 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhh
Confidence 9999999999999999988777777665 3446889999999999999999999988 2334444444453 33
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccccccchh---hHHHHHHHHHHHHHHhhccccceeeeCCccchH
Q psy16789 457 KEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTM---TFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKM 533 (608)
Q Consensus 457 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~---~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~ 533 (608)
+...++.+.++.|+..|+++.+++|++.+..+.+......+++. +|.+.+++.++...+.+ -....+.| +|+
T Consensus 933 ~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~----iaL~~~yw-T~i 1007 (1151)
T KOG0206|consen 933 LNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLK----IALETSYW-TWI 1007 (1151)
T ss_pred hccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEee----eeeeehhe-eHH
Confidence 56789999999999999999988887766555432222222222 22222222222222111 11222222 222
Q ss_pred HHHHHHHHHHHHH--HHhc---ccccc------cccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy16789 534 FLFAVCASVVGQL--FVIY---FPPLQ------KVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKC 596 (608)
Q Consensus 534 ~~~~~~~~i~~~~--~ii~---~p~l~------~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~ 596 (608)
-++.+.+++++.+ .++| .|.+. ..+....-++.+|+.+++.++++++++.++|.+.+.+.++.
T Consensus 1008 ~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~ 1081 (1151)
T KOG0206|consen 1008 NHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTD 1081 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcH
Confidence 2222222222222 1122 11111 12222334678999999999999999999999998887773
|
|
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-56 Score=457.87 Aligned_cols=496 Identities=19% Similarity=0.226 Sum_probs=378.0
Q ss_pred cccccccccccccceeeecCCCCCccccceEEEE---------------------------------------------c
Q psy16789 82 RLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF---------------------------------------------L 116 (608)
Q Consensus 82 ~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~---------------------------------------------~ 116 (608)
.++.-.--++.++.+-+..|||||+|||++..-- +
T Consensus 394 vvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv 473 (1051)
T KOG0210|consen 394 VVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARV 473 (1051)
T ss_pred eeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHH
Confidence 4555555688999999999999999999765521 0
Q ss_pred cchhhhhccccceeeecc------ccCCCccHHHHHHHHHHcCccc---------------cccccccceeeeCChHHHH
Q psy16789 117 HRLLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLYA---------------VNEHYVRLKEYPFSSEQKM 175 (608)
Q Consensus 117 kg~~ei~~lc~~a~~~~~------~~~gdp~E~Al~~~~~~~~~~~---------------~~~~~~~~~~~pF~s~~k~ 175 (608)
+.+.+.+++||++++..+ ....+|+|+||++|.+..|+.. ...+|++++.+||+|+.||
T Consensus 474 ~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKR 553 (1051)
T KOG0210|consen 474 RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKR 553 (1051)
T ss_pred HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccce
Confidence 112336799999876322 3678999999999999888632 1248999999999999999
Q ss_pred HHhHhhhcCCc---CCCCchhHHHH------hhhhhhhHHHhhccCceEEEEEc--------------------------
Q psy16789 176 MAVRVHKIGHN---LPSKRDGKMIL------SQSCSEYPKFQTLGKGLVAMARG-------------------------- 220 (608)
Q Consensus 176 m~v~~~~~~~~---~~~kg~~~~~~------~~~~~~~~~~~~~g~r~l~~a~~-------------------------- 220 (608)
|+++|++++.. .+.|||+-.+- +..+++...|+++|+|+|.+|+|
T Consensus 554 MGIIVr~e~~~evtfylKGAD~VMs~iVq~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~ 633 (1051)
T KOG0210|consen 554 MGIIVRDETTEEVTFYLKGADVVMSGIVQYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQ 633 (1051)
T ss_pred eeEEEecCCCceEEEEEecchHHHhcccccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHH
Confidence 99999976433 48899986443 24567778899999999999998
Q ss_pred --------cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC------------
Q psy16789 221 --------SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH------------ 280 (608)
Q Consensus 221 --------~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~------------ 280 (608)
.+|+||.++|+.|.||+++++++.+++.||+|||++||+|||+.+||+.+|+..++...+
T Consensus 634 ~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr 713 (1051)
T KOG0210|consen 634 KMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSR 713 (1051)
T ss_pred HHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCc
Confidence 147999999999999999999999999999999999999999999999999999995432
Q ss_pred ----------------Cccccchhhccc---CHHHHHHHhhc--ceEEEEeCchhHHHHHHHHHHC-CCEEEEEcCCcCc
Q psy16789 281 ----------------GKVLSGDQIDQM---TEHQLQQVVNS--VTVFYRVTPRHKLTIVKAFQAN-GVIVGMTGDGVND 338 (608)
Q Consensus 281 ----------------~~vi~g~~~~~~---~~~~~~~~~~~--~~v~~r~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND 338 (608)
..+++|+.++-. -++|+.++... ..++||++|.||+++++.+|+. |..|+++|||.||
T Consensus 714 ~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGND 793 (1051)
T KOG0210|consen 714 GDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGND 793 (1051)
T ss_pred hHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCcc
Confidence 456777776632 34566665554 4599999999999999999986 8999999999999
Q ss_pred HHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH-HHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCC
Q psy16789 339 GVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI-EEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPN 417 (608)
Q Consensus 339 ~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (608)
++||++||+||++.++++.+|.-|||+.++ .|..+.+++ .|||..|+|..+..+|.+...+.......+++......
T Consensus 794 VsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~ 871 (1051)
T KOG0210|consen 794 VSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFA 871 (1051)
T ss_pred chheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhc
Confidence 999999999999988999999999999997 677887776 58999999999999999988877655554444333323
Q ss_pred c---hhHHHHHHHHHHHhhhhHhhhccCC-CCccccccCCCC----CCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy16789 418 P---LNAMQILWINIIMDGPPAQSLGVEP-VDDDVKIQKPRN----VKEPMITRALVVNVLMSASIIIVGTLYVFKREMS 489 (608)
Q Consensus 418 ~---~~~~~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~P~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (608)
| +..+.+.-+.-+++.+|.+++..+. ..+++....|.- .+++.++.+.|+.|.+.+++++....+.++..+.
T Consensus 872 ~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~ 951 (1051)
T KOG0210|consen 872 PVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFD 951 (1051)
T ss_pred chHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhh
Confidence 3 3344566677789999999999863 344444444431 2567788888888888888776555443332222
Q ss_pred ccccccccchhhHHHHHHHHHHHH-HHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCC-hhH
Q psy16789 490 DNIVSKRDTTMTFTCFVFFDMFNA-LSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALT-IND 567 (608)
Q Consensus 490 ~~~~~~~~~t~~f~~lv~~~l~~~-~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~-~~~ 567 (608)
.. .-..-++.|.++++..+... +..+ .++|.++.+-++++.+ .++.+|.+.++|....+. +.+
T Consensus 952 ~e--f~~ivaisFtaLi~tELiMVaLtv~-----------tw~~~m~vae~lsL~~--Yivsl~~l~~yfd~~f~~~~~F 1016 (1051)
T KOG0210|consen 952 TE--FIHIVAISFTALILTELIMVALTVR-----------TWHWLMVVAELLSLAL--YIVSLAFLHEYFDRYFILTYVF 1016 (1051)
T ss_pred hh--heEeeeeeeHHHHHHHHHHHhhhhh-----------hhhHHHHHHHHHHHHH--HHHHHHHHHhHHHHHHHHHHHH
Confidence 21 11245788999998887543 3222 2556666666666555 455566678888776643 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy16789 568 IAFLTALTSTVFFVSEIKKAIERICER 594 (608)
Q Consensus 568 w~~~~~~~~~~~~~~~l~K~~~r~~~~ 594 (608)
+.-+.++.++++++.++.|.++|++.+
T Consensus 1017 l~k~t~I~~vS~Lpl~~~K~lrrk~sP 1043 (1051)
T KOG0210|consen 1017 LWKVTVITLVSCLPLYFIKALRRKLSP 1043 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 445677888889999999999998755
|
|
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-47 Score=395.98 Aligned_cols=510 Identities=20% Similarity=0.237 Sum_probs=375.4
Q ss_pred hhhhhcccccccccc-cccccceeeecCCCCCccccceEEEEccc-------------hh----hhhccccceeeecccc
Q psy16789 75 AVNEHYVRLKEYPFS-SEQKMMAVRCIPKEGSSCDVDTRFFFLHR-------------LL----EVGCVCNNASIIGDSL 136 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~-s~~k~m~v~~~~~~gt~~~~~~~~~~~kg-------------~~----ei~~lc~~a~~~~~~~ 136 (608)
.+.+.+....| ||- +-.+...++|.|||||+|.+.+.+--+.| ++ ++++.||.-...++.+
T Consensus 459 ALak~~vyCTE-PFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~l 537 (1160)
T KOG0209|consen 459 ALAKLGVYCTE-PFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKL 537 (1160)
T ss_pred HHHHhceeecC-ccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcc
Confidence 44455544443 443 44588999999999999988777765555 22 2778899877777789
Q ss_pred CCCccHHHHHHHHHHcCccc--------cccccccceeeeCChHHHHHHhHhhhcC------CcCCCCchhHHHHh----
Q psy16789 137 LGQPTEGALLAAGMKFGLYA--------VNEHYVRLKEYPFSSEQKMMAVRVHKIG------HNLPSKRDGKMILS---- 198 (608)
Q Consensus 137 ~gdp~E~Al~~~~~~~~~~~--------~~~~~~~~~~~pF~s~~k~m~v~~~~~~------~~~~~kg~~~~~~~---- 198 (608)
.|||.|.|.++...|.--.. .....++++.+.|+|..|||++++...+ +....|||+|.+-+
T Consensus 538 VGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d 617 (1160)
T KOG0209|consen 538 VGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD 617 (1160)
T ss_pred cCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh
Confidence 99999999999886532111 1124577899999999999999986532 22378999995543
Q ss_pred ---hhhhhhHHHhhccCceEEEEEc----------------cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEE
Q psy16789 199 ---QSCSEYPKFQTLGKGLVAMARG----------------SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLV 259 (608)
Q Consensus 199 ---~~~~~~~~~~~~g~r~l~~a~~----------------~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~ 259 (608)
++.+.+.+|+++|.||||++|| +.|+||+|.|++.+..|+|++++++|++|++.+++++|+
T Consensus 618 vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMI 697 (1160)
T KOG0209|consen 618 VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMI 697 (1160)
T ss_pred CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEE
Confidence 5667788999999999999998 358999999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHcCCCCC-----------------------------------------CCccccchhhcccCH-HHH
Q psy16789 260 TGDGQETATAIASMVGLDTI-----------------------------------------HGKVLSGDQIDQMTE-HQL 297 (608)
Q Consensus 260 TGd~~~ta~~ia~~~gi~~~-----------------------------------------~~~vi~g~~~~~~~~-~~~ 297 (608)
||||+.||.++|+++|+... ++.+++|+.++++.. +.+
T Consensus 698 TGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l 777 (1160)
T KOG0209|consen 698 TGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQL 777 (1160)
T ss_pred eCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHH
Confidence 99999999999999998432 134567777776543 457
Q ss_pred HHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHH------------------
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVC------------------ 359 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a------------------ 359 (608)
..++.++.||+|+.|.||..++..+++.|+.++|||||.||+.|+|+||||||+- ++....
T Consensus 778 ~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~ 856 (1160)
T KOG0209|consen 778 RRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAK 856 (1160)
T ss_pred HHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCchh
Confidence 7888999999999999999999999999999999999999999999999999985 222210
Q ss_pred -----------------------------------------------------HhccCEEEecCCcchHHHHHHHHHHHH
Q psy16789 360 -----------------------------------------------------KEAADMILVDDDFNTIIAAIEEGKGIF 386 (608)
Q Consensus 360 -----------------------------------------------------~~~ad~v~~~~~~~~i~~~i~~gR~~~ 386 (608)
.-||.+.....+.+++.+.|++||+..
T Consensus 857 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctL 936 (1160)
T KOG0209|consen 857 QTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTL 936 (1160)
T ss_pred hHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhH
Confidence 114566666667888999999999998
Q ss_pred HhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHH
Q psy16789 387 YNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALV 466 (608)
Q Consensus 387 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~ 466 (608)
-+.-+ .|.+..--+.+..+..+.++--+.-|++.|....-+++.. .-+.+...+|-+++.+..|. ..+||...+
T Consensus 937 VtTlQ--MfKILALN~LisAYslSvlyldGVKfgD~QaTisGlLla~-cFlfISrskPLetLSkeRP~---~nIFN~Y~i 1010 (1160)
T KOG0209|consen 937 VTTLQ--MFKILALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAA-CFLFISRSKPLETLSKERPL---PNIFNVYII 1010 (1160)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHH-HHhheecCCchhhHhhcCCC---CCcchHHHH
Confidence 55544 3444333344555666666666778999998887777655 34667778999999988884 468999989
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccc----------cccc-cchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHH
Q psy16789 467 VNVLMSASIIIVGTLYVFKREMSDNI----------VSKR-DTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFL 535 (608)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~ 535 (608)
..++.|-.++....+++......... +.+. .+|..|..-...|+.. |... ....+|+.++..|+.++
T Consensus 1011 ~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsT-FAVN-Y~G~PF~Esl~eNK~l~ 1088 (1160)
T KOG0209|consen 1011 LSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVST-FAVN-YQGRPFRESLRENKGLL 1088 (1160)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHH-hhhh-ccCcchhhhhhhccchH
Confidence 88888888877666655433221111 1111 2233333333333332 2222 23568888999999988
Q ss_pred HHHHHHHHHHHH--HhcccccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy16789 536 FAVCASVVGQLF--VIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICER 594 (608)
Q Consensus 536 ~~~~~~i~~~~~--ii~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~ 594 (608)
++++++..+.+. .-+.|.++..|.+.+++-.+-..+++...+-++.++++..+-+.+.+
T Consensus 1089 y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1089 YGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred HHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888776655443 33578888999999998776666666555556666655555444444
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=410.91 Aligned_cols=305 Identities=23% Similarity=0.264 Sum_probs=257.1
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE---ccchh--hh---hccccceeeecc
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF---LHRLL--EV---GCVCNNASIIGD 134 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~---~kg~~--ei---~~lc~~a~~~~~ 134 (608)
+++..+...|..++.+++..++..+.-++.+.++++|.|||||+|+++..... ..|.. ++ ..+|+.+
T Consensus 266 ~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~~~~----- 340 (673)
T PRK14010 266 GLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIA----- 340 (673)
T ss_pred HHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHhcCC-----
Confidence 44555556677888999999999999999999999999999999996544322 33331 22 2345431
Q ss_pred ccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhhh-----------hh
Q psy16789 135 SLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSC-----------SE 203 (608)
Q Consensus 135 ~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~~-----------~~ 203 (608)
..+|++.|+++++++.++... ....+.+||++++|+|++.+++ ....||+++.+++.|. +.
T Consensus 341 --s~~P~~~AIv~~a~~~~~~~~---~~~~~~~pF~~~~k~~gv~~~g---~~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 341 --DDTPEGRSIVKLAYKQHIDLP---QEVGEYIPFTAETRMSGVKFTT---REVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred --CCChHHHHHHHHHHHcCCCch---hhhcceeccccccceeEEEECC---EEEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 248999999999988765321 1223458999999999986432 2345999988876553 33
Q ss_pred hHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCcc
Q psy16789 204 YPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKV 283 (608)
Q Consensus 204 ~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~v 283 (608)
.++++++|+|+++++. |++++|+++++||+|++++++|++||++||+++|+|||++.||.++|+++|++.
T Consensus 413 ~~~~a~~G~~~l~v~~-----~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----- 482 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-----DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----- 482 (673)
T ss_pred HHHHHhCCCeEEEEEE-----CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----
Confidence 4678899999999874 679999999999999999999999999999999999999999999999999974
Q ss_pred ccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhcc
Q psy16789 284 LSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAA 363 (608)
Q Consensus 284 i~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~a 363 (608)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||+ +|++.+|++|
T Consensus 483 ----------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAA 539 (673)
T PRK14010 483 ----------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAA 539 (673)
T ss_pred ----------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhC
Confidence 89999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHh
Q psy16789 364 DMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLL 413 (608)
Q Consensus 364 d~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 413 (608)
|+++.+++|..+.+++++||++|.|+++++.|.+..|++.++..+...+.
T Consensus 540 DiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 540 NLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred CEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999977666554443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=386.81 Aligned_cols=306 Identities=25% Similarity=0.314 Sum_probs=250.4
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE---ccchhh--h---hccccceeeeccccC
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF---LHRLLE--V---GCVCNNASIIGDSLL 137 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~---~kg~~e--i---~~lc~~a~~~~~~~~ 137 (608)
..+...|..++.+++..++....-++.+..+++|.|||||+|++++.... ..|..+ + ..+|+.+ .
T Consensus 269 ~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~s~~-------s 341 (679)
T PRK01122 269 SAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLSSLA-------D 341 (679)
T ss_pred HHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHhcCC-------C
Confidence 33334466788899999999999999999999999999999998876543 334322 2 2344332 1
Q ss_pred CCccHHHHHHHHHH-cCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhh-----------hhhhH
Q psy16789 138 GQPTEGALLAAGMK-FGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQS-----------CSEYP 205 (608)
Q Consensus 138 gdp~E~Al~~~~~~-~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~-----------~~~~~ 205 (608)
-+|...|+++++++ .+....+..|+..+.+||++++|+|++.++ ...+.||+++.+++.| .+..+
T Consensus 342 ~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~---g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~ 418 (679)
T PRK01122 342 ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLD---GREIRKGAVDAIRRYVESNGGHFPAELDAAVD 418 (679)
T ss_pred CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEEC---CEEEEECCHHHHHHHHHhcCCcChHHHHHHHH
Confidence 25888999999987 344332233567788999999888887542 2457889988776654 33456
Q ss_pred HHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCcccc
Q psy16789 206 KFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLS 285 (608)
Q Consensus 206 ~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~ 285 (608)
+++++|.|++++|+ |++++|+++++|++|+++++++++||++||+++|+|||++.||.++|+++|+++
T Consensus 419 ~~a~~G~~~l~va~-----~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------- 486 (679)
T PRK01122 419 EVARKGGTPLVVAE-----DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------- 486 (679)
T ss_pred HHHhCCCcEEEEEE-----CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-------
Confidence 78999999999996 568999999999999999999999999999999999999999999999999964
Q ss_pred chhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCE
Q psy16789 286 GDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADM 365 (608)
Q Consensus 286 g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~ 365 (608)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||+ +|++.+|++||+
T Consensus 487 --------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 545 (679)
T PRK01122 487 --------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNM 545 (679)
T ss_pred --------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCE
Confidence 89999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHH---HHHHHHHHHHhc
Q psy16789 366 ILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIA---ALSLIALATLLR 414 (608)
Q Consensus 366 v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~ 414 (608)
++.++||..+.+++++||+..-.-.....|++..-++ .+++..+...++
T Consensus 546 VLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~ 597 (679)
T PRK01122 546 VDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYP 597 (679)
T ss_pred EEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCc
Confidence 9999999999999999999985444556777664443 455555554443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=360.99 Aligned_cols=292 Identities=22% Similarity=0.304 Sum_probs=247.9
Q ss_pred cCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cchhh--hh---ccccceeeeccccCCCccH
Q psy16789 71 FGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRLLE--VG---CVCNNASIIGDSLLGQPTE 142 (608)
Q Consensus 71 ~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~~e--i~---~lc~~a~~~~~~~~gdp~E 142 (608)
.|+.++.+++..++.....++.+..+++|.|||||+|+|++.+..+ +|..+ ++ .+|+.+ ..+|++
T Consensus 275 ag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~~~~-------s~hP~a 347 (675)
T TIGR01497 275 AGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLA-------DDTPEG 347 (675)
T ss_pred HHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHhcCC-------CCCcHH
Confidence 4567888999999999999999999999999999999998766433 34322 33 334331 246899
Q ss_pred HHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhh-----------hhhhhHHHhhcc
Q psy16789 143 GALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQ-----------SCSEYPKFQTLG 211 (608)
Q Consensus 143 ~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~-----------~~~~~~~~~~~g 211 (608)
.|+++++++.+.......++..+..||++++|+|++.+.+ ...+.||+++.+++. +.+.+++++++|
T Consensus 348 ~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~--g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G 425 (675)
T TIGR01497 348 KSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDN--GRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQG 425 (675)
T ss_pred HHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeC--CeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCC
Confidence 9999999987764433344567789999998777654322 245788998766543 344567889999
Q ss_pred CceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcc
Q psy16789 212 KGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQ 291 (608)
Q Consensus 212 ~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~ 291 (608)
.|++++|++ .+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+++
T Consensus 426 ~r~l~va~~-----~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------------- 487 (675)
T TIGR01497 426 GTPLVVCED-----NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------------- 487 (675)
T ss_pred CeEEEEEEC-----CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------
Confidence 999999974 58999999999999999999999999999999999999999999999999964
Q ss_pred cCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC
Q psy16789 292 MTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD 371 (608)
Q Consensus 292 ~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~ 371 (608)
++++++|++|.++++.+|++|+.|+|+|||.||+|||++||+||||+ +|++.++++||+++.+++
T Consensus 488 --------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~ 552 (675)
T TIGR01497 488 --------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSD 552 (675)
T ss_pred --------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCC
Confidence 78999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHH
Q psy16789 372 FNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAAL 404 (608)
Q Consensus 372 ~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~ 404 (608)
|..+.+++++||+++.+......|++...++-.
T Consensus 553 ~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 553 PTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 999999999999999888888999988776633
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=326.36 Aligned_cols=372 Identities=27% Similarity=0.346 Sum_probs=297.9
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceE-----E-EEccchhh--hhccccceeeecc
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTR-----F-FFLHRLLE--VGCVCNNASIIGD 134 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~-----~-~~~kg~~e--i~~lc~~a~~~~~ 134 (608)
+++...++.|..++.++..+++++...++..-|.++|.|||||+|.|+.. + +++||... ++-.+..|+..
T Consensus 295 tVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~-- 372 (942)
T KOG0205|consen 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRK-- 372 (942)
T ss_pred eeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhh--
Confidence 57777788888889999999999999999999999999999999866421 3 67788654 44333333322
Q ss_pred ccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHHHhhhh----------h
Q psy16789 135 SLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMILSQSC----------S 202 (608)
Q Consensus 135 ~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~~~~~~----------~ 202 (608)
-..|..|.|++...... ...+..|+.++..||+...||....+.++. .....||+++.+++-|+ +
T Consensus 373 -en~DAID~A~v~~L~dP--Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~ 449 (942)
T KOG0205|consen 373 -ENQDAIDAAIVGMLADP--KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHS 449 (942)
T ss_pred -cChhhHHHHHHHhhcCH--HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHH
Confidence 23689999999887652 445678899999999999999887665433 33488999998887554 5
Q ss_pred hhHHHhhccCceEEEEEcc--------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc
Q psy16789 203 EYPKFQTLGKGLVAMARGS--------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV 274 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~--------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~ 274 (608)
.+++|+++|+|-+++|++. ......|+|+..+-||||.++.++|+.....|.+|.|+|||...-++..++++
T Consensus 450 ~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrl 529 (942)
T KOG0205|consen 450 IIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (942)
T ss_pred HHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhh
Confidence 6889999999999999985 23568999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC--ccccchh-hcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 275 GLDTIHG--KVLSGDQ-IDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 275 gi~~~~~--~vi~g~~-~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
|+-..-. .-+-|.+ -+.+...++++.+.+..-|+.+.|++|.++|+.+|++++.++|+|||.||+|++|+||+||++
T Consensus 530 gmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiav 609 (942)
T KOG0205|consen 530 GMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAV 609 (942)
T ss_pred ccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceee
Confidence 9865321 1111111 122233345666777788999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHH
Q psy16789 352 GKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIM 431 (608)
Q Consensus 352 ~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 431 (608)
. .+++.++.++|+|+++...+-++.++..+|.+|+|++.+..|.+..++-.++...+..+. +...|+|...+++-++.
T Consensus 610 a-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alI-w~~df~pfmvliiailn 687 (942)
T KOG0205|consen 610 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALI-WEFDFSPFMVLIIAILN 687 (942)
T ss_pred c-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHhc
Confidence 9 999999999999999999999999999999999999999999988887755332222222 23567888888888777
Q ss_pred hhhhHhhhccC
Q psy16789 432 DGPPAQSLGVE 442 (608)
Q Consensus 432 ~~~~~~~l~~~ 442 (608)
|.. .++++.+
T Consensus 688 d~t-~mtis~d 697 (942)
T KOG0205|consen 688 DGT-IMTISKD 697 (942)
T ss_pred CCc-eEEEEcc
Confidence 764 3444443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=314.56 Aligned_cols=273 Identities=34% Similarity=0.503 Sum_probs=236.9
Q ss_pred chhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhhhhccccceeeeccccCCCccHHHHHHHHHHc
Q psy16789 73 LYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF 152 (608)
Q Consensus 73 ~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~ei~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~ 152 (608)
..++.++...++.....++.+.+.++|.|||||+|++++.+..+.... .+...++|+|.|+++++++.
T Consensus 208 ~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~------------~~~~s~hp~~~ai~~~~~~~ 275 (499)
T TIGR01494 208 DARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLG------------GEYLSGHPDERALVKSAKWK 275 (499)
T ss_pred HHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecC------------CCcCCCChHHHHHHHHhhhc
Confidence 346667788999999999999999999999999999888765432110 02456899999999998752
Q ss_pred CccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhh---hhhhHHHhhccCceEEEEEccCCCCceEE
Q psy16789 153 GLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQS---CSEYPKFQTLGKGLVAMARGSNLQDLCYM 229 (608)
Q Consensus 153 ~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~---~~~~~~~~~~g~r~l~~a~~~~e~~l~~~ 229 (608)
.....||++.+|+|+++++..+ ..+.||+++.+.+.| .+..++++.+|+|++++|++. .++
T Consensus 276 ----------~~~~~~f~~~~~~~~~~~~~~~-~~~~~G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~-----~~~ 339 (499)
T TIGR01494 276 ----------ILNVFEFSSVRKRMSVIVRGPD-GTYVKGAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKE-----TLL 339 (499)
T ss_pred ----------CcceeccCCCCceEEEEEecCC-cEEEeCCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECC-----eEE
Confidence 2356899999999998876522 246789998887765 334566888999999999876 799
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR 309 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r 309 (608)
|++.++|++|++++++|+.|+++|++++|+|||+..++..+|+++|+ +++
T Consensus 340 g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------------------------------~~~ 389 (499)
T TIGR01494 340 GLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------------------------------FAR 389 (499)
T ss_pred EEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------------------------------eec
Confidence 99999999999999999999999999999999999999999999987 477
Q ss_pred eCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhh
Q psy16789 310 VTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNI 389 (608)
Q Consensus 310 ~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i 389 (608)
.+|++|.++|+.+|+.|+.|+|+|||.||++|+++||+||+|+ ++++||+++.++++..+..++++||+.+.++
T Consensus 390 ~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i 463 (499)
T TIGR01494 390 VTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTI 463 (499)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999996 6889999999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHH
Q psy16789 390 RNFVRFQLSTSIAALSLIAL 409 (608)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~ 409 (608)
++++.|.+.+|+..+.+.+.
T Consensus 464 ~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 464 KSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987666554
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=300.61 Aligned_cols=288 Identities=27% Similarity=0.364 Sum_probs=227.2
Q ss_pred hhhhhcccccccccccccccceeeecCCCCCccccceEEEEccch--h--hhhccccceeeeccccCCCccHHHHHHHHH
Q psy16789 75 AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRL--L--EVGCVCNNASIIGDSLLGQPTEGALLAAGM 150 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~--~--ei~~lc~~a~~~~~~~~gdp~E~Al~~~~~ 150 (608)
.-.++...++.-.+-+..+...+++.|||||+|+++..+.-+... . |++.+.... +.....|.-.|++++++
T Consensus 385 ~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~~e~~~L~laAal----E~~S~HPiA~AIv~~a~ 460 (713)
T COG2217 385 RAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDGDEDELLALAAAL----EQHSEHPLAKAIVKAAA 460 (713)
T ss_pred HHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCCCHHHHHHHHHHH----HhcCCChHHHHHHHHHH
Confidence 345677788888888999999999999999999998888766543 2 255444332 22346899999999988
Q ss_pred HcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHh------hhhhhhHHHhhccCceEEEEEccCCC
Q psy16789 151 KFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILS------QSCSEYPKFQTLGKGLVAMARGSNLQ 224 (608)
Q Consensus 151 ~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~------~~~~~~~~~~~~g~r~l~~a~~~~e~ 224 (608)
..+.... +..+++| -.++.-+-++. ...-|...-+-+ ...+..+.+..+|..++.++...
T Consensus 461 ~~~~~~~----~~~~~i~------G~Gv~~~v~g~-~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg--- 526 (713)
T COG2217 461 ERGLPDV----EDFEEIP------GRGVEAEVDGE-RVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDG--- 526 (713)
T ss_pred hcCCCCc----cceeeec------cCcEEEEECCE-EEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECC---
Confidence 7663221 1122222 01111000000 011111111110 12345677788898888888764
Q ss_pred CceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcc
Q psy16789 225 DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304 (608)
Q Consensus 225 ~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 304 (608)
.++|+++++|++|++++++|++||+.|++++|+|||+..+|.++|+++||++
T Consensus 527 --~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-------------------------- 578 (713)
T COG2217 527 --KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-------------------------- 578 (713)
T ss_pred --EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh--------------------------
Confidence 8899999999999999999999999999999999999999999999999975
Q ss_pred eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHH
Q psy16789 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKG 384 (608)
Q Consensus 305 ~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~ 384 (608)
+++.+.|++|.++|+.+|++|++|+|+|||.||+|||++|||||||| .|++.++++||+++.++++..+.++++.+|+
T Consensus 579 -v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~ 656 (713)
T COG2217 579 -VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRA 656 (713)
T ss_pred -heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999 7999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHH
Q psy16789 385 IFYNIRNFVRFQLSTSIAALSLIALA 410 (608)
Q Consensus 385 ~~~~i~~~~~~~~~~~~~~~~~~~~~ 410 (608)
++++|++++.|.+.+|...+.....+
T Consensus 657 t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 657 TRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998877665555
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=277.22 Aligned_cols=313 Identities=25% Similarity=0.354 Sum_probs=250.6
Q ss_pred HHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccc---eEEEEccchhh--hhccccceeeecccc
Q psy16789 62 GALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVD---TRFFFLHRLLE--VGCVCNNASIIGDSL 136 (608)
Q Consensus 62 ~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~---~~~~~~kg~~e--i~~lc~~a~~~~~~~ 136 (608)
++||....-.|++++.+-+.+...--..+.-+-..++.-|||||+|-++ ..+...+|..+ ....|..+++.++
T Consensus 266 GgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~De-- 343 (681)
T COG2216 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLADE-- 343 (681)
T ss_pred HHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhccC--
Confidence 3666666666777877777777777788888999999999999998433 45667788765 5555655555444
Q ss_pred CCCccHHHHHHHHHHcCccccccccc-cceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHh-----------hhhhhh
Q psy16789 137 LGQPTEGALLAAGMKFGLYAVNEHYV-RLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILS-----------QSCSEY 204 (608)
Q Consensus 137 ~gdp~E~Al~~~~~~~~~~~~~~~~~-~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~-----------~~~~~~ 204 (608)
.|.-..++++|++.+.....+... ....+||+.+.|+.++...+. ...-||+...+.+ +++...
T Consensus 344 --TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~ 419 (681)
T COG2216 344 --TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAV 419 (681)
T ss_pred --CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCCCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHH
Confidence 456688999999987654333333 346789999998887765433 4466888775544 355667
Q ss_pred HHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccc
Q psy16789 205 PKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVL 284 (608)
Q Consensus 205 ~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi 284 (608)
++-++.|-..|+++... .++|++.++|-++++.+|-+.+||+.|||.+|+||||+.||..||++.|+++
T Consensus 420 ~~vs~~GGTPL~V~~~~-----~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------ 488 (681)
T COG2216 420 DEVSRLGGTPLVVVENG-----RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------ 488 (681)
T ss_pred HHHHhcCCCceEEEECC-----EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------
Confidence 88899999999998754 8899999999999999999999999999999999999999999999999987
Q ss_pred cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC
Q psy16789 285 SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364 (608)
Q Consensus 285 ~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad 364 (608)
..+.++|++|.+.++.-|..|+-|+|+|||.||+||+.+||||+||. +|++.||++++
T Consensus 489 ---------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaN 546 (681)
T COG2216 489 ---------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAAN 546 (681)
T ss_pred ---------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhc
Confidence 55788999999999999999999999999999999999999999999 99999999999
Q ss_pred EEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHH---HHHHHHHHHHh
Q psy16789 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIA---ALSLIALATLL 413 (608)
Q Consensus 365 ~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~ 413 (608)
.|=.|.|...+.+.++.|++.+-.=-..-.|++..-++ .+++..+...+
T Consensus 547 MVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~ 598 (681)
T COG2216 547 MVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAY 598 (681)
T ss_pred ccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999874333344566543333 44455544444
|
|
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=276.66 Aligned_cols=302 Identities=25% Similarity=0.303 Sum_probs=222.8
Q ss_pred hhcccccccccccccccceeeecCCCCCccccceEEEEccchhh------hhccccceeeeccccCCCccHHHHHHHHHH
Q psy16789 78 EHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE------VGCVCNNASIIGDSLLGQPTEGALLAAGMK 151 (608)
Q Consensus 78 ~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e------i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~ 151 (608)
++..+++.-..-+......+++.|||||+|+++..+..++-..+ .+.+...+ +.....|.-.|+++||++
T Consensus 565 ~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~----Es~SeHPig~AIv~yak~ 640 (951)
T KOG0207|consen 565 TNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAM----ESGSEHPIGKAIVDYAKE 640 (951)
T ss_pred hcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHH----hcCCcCchHHHHHHHHHh
Confidence 44555655555556666778889999999988766655433222 22222211 123457999999999998
Q ss_pred cCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHH-------HHhhhhhhhHHHhhccCceEEEEEccCCC
Q psy16789 152 FGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKM-------ILSQSCSEYPKFQTLGKGLVAMARGSNLQ 224 (608)
Q Consensus 152 ~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~-------~~~~~~~~~~~~~~~g~r~l~~a~~~~e~ 224 (608)
.......+. ......|..+-+. +-+.-.+.. ..-|..+- +.++..+.+++....|..+..++...
T Consensus 641 ~~~~~~~~~--~~~~~~~pg~g~~--~~~~~~~~~-i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~--- 712 (951)
T KOG0207|consen 641 KLVEPNPEG--VLSFEYFPGEGIY--VTVTVDGNE-VLIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNG--- 712 (951)
T ss_pred cccccCccc--cceeecccCCCcc--cceEEeeeE-EeechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECC---
Confidence 762211110 1111111111111 111100000 11111111 11234455666678899999998875
Q ss_pred CceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcc
Q psy16789 225 DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304 (608)
Q Consensus 225 ~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 304 (608)
.+.|++.++|++|+|+..+|+.||+.||+++|+||||..+|..+|+++|++.
T Consensus 713 --~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~-------------------------- 764 (951)
T KOG0207|consen 713 --QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN-------------------------- 764 (951)
T ss_pred --EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce--------------------------
Confidence 7899999999999999999999999999999999999999999999999765
Q ss_pred eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHH
Q psy16789 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKG 384 (608)
Q Consensus 305 ~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~ 384 (608)
|++...|+||.+.|+.+|+++..|+|+|||.||+|||.+|||||+++ .|++.|.++||+++..+++..++.+|+.+|+
T Consensus 765 -V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrk 842 (951)
T KOG0207|consen 765 -VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRK 842 (951)
T ss_pred -EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999 8899999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHH
Q psy16789 385 IFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAM 422 (608)
Q Consensus 385 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (608)
...|++.++.|.+++|+..+. ...+.|.+++..+.|+
T Consensus 843 t~~rIk~N~~~A~~yn~~~Ip-IAagvF~P~~~~L~Pw 879 (951)
T KOG0207|consen 843 TVKRIKLNFVWALIYNLVGIP-IAAGVFAPFGIVLPPW 879 (951)
T ss_pred HHhhHHHHHHHHHHHHHhhhh-hheecccCCccccCch
Confidence 999999999999999988764 3444555555334443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=292.71 Aligned_cols=284 Identities=24% Similarity=0.310 Sum_probs=223.9
Q ss_pred hhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cchhh--hhccccceeeeccccCCCccHHHHHHHH
Q psy16789 75 AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRLLE--VGCVCNNASIIGDSLLGQPTEGALLAAG 149 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~~e--i~~lc~~a~~~~~~~~gdp~E~Al~~~~ 149 (608)
...++...++....-+..+.+.++|.|||||+|++++.+..+ ++..+ ++.++..+ .....+|.+.|+++++
T Consensus 416 ~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa~~----e~~s~hPia~Ai~~~a 491 (741)
T PRK11033 416 AAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAAAV----EQGSTHPLAQAIVREA 491 (741)
T ss_pred HHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHHHHHHH----hcCCCCHHHHHHHHHH
Confidence 345777889999999999999999999999999998776543 33322 44444321 1234689999999999
Q ss_pred HHcCccccccccccceeeeCChHHHHHHhH-hhh--cCCcCCCCchhHHH---HhhhhhhhHHHhhccCceEEEEEccCC
Q psy16789 150 MKFGLYAVNEHYVRLKEYPFSSEQKMMAVR-VHK--IGHNLPSKRDGKMI---LSQSCSEYPKFQTLGKGLVAMARGSNL 223 (608)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~-~~~--~~~~~~~kg~~~~~---~~~~~~~~~~~~~~g~r~l~~a~~~~e 223 (608)
++.+.. +|+.++.+.+... ++. .+.. ..-|+.+.+ -++..+.++++..+|.++++++++
T Consensus 492 ~~~~~~-----------~~~~~~~~~~~g~Gv~~~~~g~~-~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~--- 556 (741)
T PRK11033 492 QVRGLA-----------IPEAESQRALAGSGIEGQVNGER-VLICAPGKLPPLADAFAGQINELESAGKTVVLVLRN--- 556 (741)
T ss_pred HhcCCC-----------CCCCcceEEEeeEEEEEEECCEE-EEEecchhhhhccHHHHHHHHHHHhCCCEEEEEEEC---
Confidence 876542 2444443333110 110 0110 111222222 123444567788999999999974
Q ss_pred CCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhc
Q psy16789 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNS 303 (608)
Q Consensus 224 ~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 303 (608)
..++|+++++|++|++++++|+.|+++|++++|+|||+..++..+|+++|+..
T Consensus 557 --~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~------------------------- 609 (741)
T PRK11033 557 --DDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF------------------------- 609 (741)
T ss_pred --CEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe-------------------------
Confidence 58999999999999999999999999999999999999999999999999952
Q ss_pred ceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHH
Q psy16789 304 VTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGK 383 (608)
Q Consensus 304 ~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR 383 (608)
+++..|++|.++++.+|+. +.|+|+|||.||+||+++||+||+|+ ++++.++++||+++.++++.++.++++.||
T Consensus 610 ---~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr 684 (741)
T PRK11033 610 ---RAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSR 684 (741)
T ss_pred ---ecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHH
Confidence 3456799999999999965 58999999999999999999999999 899999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhhHHHHHHHHHH
Q psy16789 384 GIFYNIRNFVRFQLSTSIAALSLIAL 409 (608)
Q Consensus 384 ~~~~~i~~~~~~~~~~~~~~~~~~~~ 409 (608)
+++.||++++.|.+.+|...+...++
T Consensus 685 ~~~~~I~~nl~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 685 ATHANIRQNITIALGLKAIFLVTTLL 710 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876655443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=271.17 Aligned_cols=294 Identities=27% Similarity=0.375 Sum_probs=229.9
Q ss_pred CchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cch---hh-hhccccceeeeccccCCCccHHH
Q psy16789 72 GLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRL---LE-VGCVCNNASIIGDSLLGQPTEGA 144 (608)
Q Consensus 72 g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~---~e-i~~lc~~a~~~~~~~~gdp~E~A 144 (608)
+...+.++...++....-+..+.+.++|.|||||+|++++.+..+ .+. .+ ++.+|..+. ....+|++.|
T Consensus 223 ~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e----~~~~hp~~~A 298 (556)
T TIGR01525 223 AIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALE----QSSSHPLARA 298 (556)
T ss_pred HHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHh----ccCCChHHHH
Confidence 345677888999999999999999999999999999998776543 222 23 555554332 2356899999
Q ss_pred HHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHH------HhhhhhhhHHHhhccCceEEEE
Q psy16789 145 LLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMI------LSQSCSEYPKFQTLGKGLVAMA 218 (608)
Q Consensus 145 l~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~------~~~~~~~~~~~~~~g~r~l~~a 218 (608)
+++++++.+..... .+ ...++|- +.....++ +......|+.+.+ .++..+.++.++++|+|++.++
T Consensus 299 i~~~~~~~~~~~~~-~~-~~~~~~~----~gi~~~~~--g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 370 (556)
T TIGR01525 299 IVRYAKKRGLELPK-QE-DVEEVPG----KGVEATVD--GQEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVA 370 (556)
T ss_pred HHHHHHhcCCCccc-cc-CeeEecC----CeEEEEEC--CeeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEE
Confidence 99999987654311 00 1111110 00011111 1001111222211 1112234566788999999998
Q ss_pred EccCCCCceEEEEeeecCCCChhHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHH
Q psy16789 219 RGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSG-VKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQL 297 (608)
Q Consensus 219 ~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~ 297 (608)
+. .+++|.+.++|+++++++++|++|+++| +++.++|||+..++..+++++|+..
T Consensus 371 ~~-----~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------------------- 426 (556)
T TIGR01525 371 VD-----GELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------------------- 426 (556)
T ss_pred EC-----CEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-------------------
Confidence 64 4899999999999999999999999999 9999999999999999999999964
Q ss_pred HHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
+|+++.|++|.++++.+++.++.|+|+|||.||++|++.||+|++++ ++++.+++.||+++.++++..+.+
T Consensus 427 --------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~ 497 (556)
T TIGR01525 427 --------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPT 497 (556)
T ss_pred --------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHH
Confidence 67788899999999999999999999999999999999999999999 889999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHH
Q psy16789 378 AIEEGKGIFYNIRNFVRFQLSTSIAALSLIALA 410 (608)
Q Consensus 378 ~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~ 410 (608)
+++.||+++.|+++++.|.+.+|+..+.+.+.+
T Consensus 498 ~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 498 AIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987655443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=260.61 Aligned_cols=286 Identities=27% Similarity=0.361 Sum_probs=221.9
Q ss_pred CchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhhhhccccceeeeccccCCCccHHHHHHHHHH
Q psy16789 72 GLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMK 151 (608)
Q Consensus 72 g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~ei~~lc~~a~~~~~~~~gdp~E~Al~~~~~~ 151 (608)
+..++.++...+++...-+..+.+.++|.|||||+|++++.+..+... +++..+... +....+|.+.|+++++++
T Consensus 223 ~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~-~~l~~a~~~----e~~~~hp~~~Ai~~~~~~ 297 (536)
T TIGR01512 223 AISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA-EVLRLAAAA----EQASSHPLARAIVDYARK 297 (536)
T ss_pred HHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-HHHHHHHHH----hccCCCcHHHHHHHHHHh
Confidence 345677888899999999999999999999999999998887655332 333332211 123468999999999886
Q ss_pred cCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEE
Q psy16789 152 FGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGL 231 (608)
Q Consensus 152 ~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~ 231 (608)
.+ ......+.|- +.+...++ +.. ..-|+.+.+.+. ....+..+|.+++.++. |..++|.
T Consensus 298 ~~------~~~~~~~~~g----~gi~~~~~--g~~-~~ig~~~~~~~~---~~~~~~~~~~~~~~v~~-----~~~~~g~ 356 (536)
T TIGR01512 298 RE------NVESVEEVPG----EGVRAVVD--GGE-VRIGNPRSLEAA---VGARPESAGKTIVHVAR-----DGTYLGY 356 (536)
T ss_pred cC------CCcceEEecC----CeEEEEEC--CeE-EEEcCHHHHhhc---CCcchhhCCCeEEEEEE-----CCEEEEE
Confidence 53 1111222221 00000001 111 111222221111 11245667878777764 4689999
Q ss_pred eeecCCCChhHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 232 VGICDPPRPHVRECMSTLLQSGV-KVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 232 ~~~~d~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
+.++|++|++++++|+.|+++|+ ++.++|||+..++..+++++|+.. +|++.
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~ 409 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAEL 409 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhcc
Confidence 99999999999999999999999 999999999999999999999964 56677
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhh
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~ 390 (608)
.|++|.++++.+++.++.|+|+|||.||++|++.||+|++++.++++.++++||+++.++++..+.++++.||+++++++
T Consensus 410 ~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~ 489 (536)
T TIGR01512 410 LPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVK 489 (536)
T ss_pred CcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999866889999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHH
Q psy16789 391 NFVRFQLSTSIAALSLIALA 410 (608)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~ 410 (608)
+++.|.+.+|+..+.+.+++
T Consensus 490 ~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 490 QNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999998877665543
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=266.29 Aligned_cols=287 Identities=23% Similarity=0.285 Sum_probs=223.8
Q ss_pred hhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cchhh--hhccccceeeeccccCCCccHHHHHHH
Q psy16789 74 YAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRLLE--VGCVCNNASIIGDSLLGQPTEGALLAA 148 (608)
Q Consensus 74 ~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~~e--i~~lc~~a~~~~~~~~gdp~E~Al~~~ 148 (608)
....++...++....-+..+.+.++|.|||||+|+++..+... .+..+ ++.++..+ .....+|++.|++++
T Consensus 496 ~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~----e~~s~hp~a~Ai~~~ 571 (834)
T PRK10671 496 GRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALRLAAAL----EQGSSHPLARAILDK 571 (834)
T ss_pred HHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCCCHHHHHHHHHHH----hCCCCCHHHHHHHHH
Confidence 4566888899999999999999999999999999998776533 33222 33222111 122468999999998
Q ss_pred HHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHH------hhhhhhhHHHhhccCceEEEEEccC
Q psy16789 149 GMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMIL------SQSCSEYPKFQTLGKGLVAMARGSN 222 (608)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~------~~~~~~~~~~~~~g~r~l~~a~~~~ 222 (608)
+....... ..+++...-...+ ..+ ++. ....|+.+.+. ++..+.++.+..+|.+++.++++.
T Consensus 572 ~~~~~~~~-~~~~~~~~g~Gv~-------~~~--~g~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~- 639 (834)
T PRK10671 572 AGDMTLPQ-VNGFRTLRGLGVS-------GEA--EGH-ALLLGNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDG- 639 (834)
T ss_pred HhhCCCCC-cccceEecceEEE-------EEE--CCE-EEEEeCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECC-
Confidence 86432211 0111100000000 000 011 11223333221 234445677788999999998754
Q ss_pred CCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhh
Q psy16789 223 LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVN 302 (608)
Q Consensus 223 e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 302 (608)
.++|.+.+.|++|++++++|++|++.|++++|+|||+..++..+++++|+..
T Consensus 640 ----~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------ 691 (834)
T PRK10671 640 ----KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------ 691 (834)
T ss_pred ----EEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------
Confidence 7899999999999999999999999999999999999999999999999964
Q ss_pred cceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHH
Q psy16789 303 SVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382 (608)
Q Consensus 303 ~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~g 382 (608)
++++..|++|.++++.++.+++.|+|+|||.||++|++.||+||+|| ++++.++++||+++.++++.++.++++.|
T Consensus 692 ---~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~ 767 (834)
T PRK10671 692 ---VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAIS 767 (834)
T ss_pred ---EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 67888899999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhHHHHHHHHH
Q psy16789 383 KGIFYNIRNFVRFQLSTSIAALSLIA 408 (608)
Q Consensus 383 R~~~~~i~~~~~~~~~~~~~~~~~~~ 408 (608)
|..+.++++++.|.+.+|+..+.+..
T Consensus 768 r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 768 RATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988776543
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-27 Score=256.96 Aligned_cols=287 Identities=24% Similarity=0.344 Sum_probs=219.3
Q ss_pred hhhhhhcccccccccccccccceeeecCCCCCccccceEEEEcc---chh--hhhccccceeeeccccCCCccHHHHHHH
Q psy16789 74 YAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLH---RLL--EVGCVCNNASIIGDSLLGQPTEGALLAA 148 (608)
Q Consensus 74 ~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~k---g~~--ei~~lc~~a~~~~~~~~gdp~E~Al~~~ 148 (608)
....++...++....-+..+.+.++|.|||||+|+++..+..+. +.. +++.++..+. ....+|.+.|++++
T Consensus 256 ~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~l~~aa~~e----~~s~HPia~Ai~~~ 331 (562)
T TIGR01511 256 GLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRDRTELLALAAALE----AGSEHPLAKAIVSY 331 (562)
T ss_pred HHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCCHHHHHHHHHHHh----ccCCChHHHHHHHH
Confidence 45667888899999999999999999999999999887765442 222 2454443221 12358999999999
Q ss_pred HHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceE
Q psy16789 149 GMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCY 228 (608)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~ 228 (608)
+++.+.... +.+...++| .+.+...+++ .....|+..-+ ++....+.+..++|.+++.++. |.++
T Consensus 332 ~~~~~~~~~--~~~~~~~~~----g~Gi~~~~~g---~~~~iG~~~~~-~~~~~~~~~~~~~g~~~~~~~~-----~~~~ 396 (562)
T TIGR01511 332 AKEKGITLV--EVSDFKAIP----GIGVEGTVEG---TKIQLGNEKLL-GENAIKIDGKAEQGSTSVLVAV-----NGEL 396 (562)
T ss_pred HHhcCCCcC--CCCCeEEEC----CceEEEEECC---EEEEEECHHHH-HhCCCCCChhhhCCCEEEEEEE-----CCEE
Confidence 987654321 111111111 0000000110 00111222221 1111112334578888888765 4589
Q ss_pred EEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE
Q psy16789 229 MGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 229 ~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
+|.+.++|++|++++++|++|++.|+++.|+|||+..++..+++++|++ +++
T Consensus 397 ~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------------------~~~ 448 (562)
T TIGR01511 397 AGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------------------VRA 448 (562)
T ss_pred EEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc----------------------------EEc
Confidence 9999999999999999999999999999999999999999999999994 456
Q ss_pred EeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHh
Q psy16789 309 RVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYN 388 (608)
Q Consensus 309 r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~ 388 (608)
+..|++|.++++.++++++.|+|+|||.||++|+++||+||+++ ++++.++++||+++.++++..+.++++.+|+++++
T Consensus 449 ~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~ 527 (562)
T TIGR01511 449 EVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRR 527 (562)
T ss_pred cCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 67799999999999999999999999999999999999999999 78999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHHHH
Q psy16789 389 IRNFVRFQLSTSIAALSLIA 408 (608)
Q Consensus 389 i~~~~~~~~~~~~~~~~~~~ 408 (608)
+++++.|.+.+|+..+...+
T Consensus 528 i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 528 IKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988665444
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.9e-25 Score=206.11 Aligned_cols=173 Identities=37% Similarity=0.637 Sum_probs=147.4
Q ss_pred CCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc-ccc-
Q psy16789 416 PNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSD-NIV- 493 (608)
Q Consensus 416 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 493 (608)
|.|+++.|+||+|+++|.+|+++++.||||+++|++||+++++++++++++..++.+|++.++.++..|+..... +..
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 679999999999999999999999999999999999999999999999999999999999888888877655431 111
Q ss_pred ------ccccchhhHHHHHHHHHHHHHHhhccccceee-eCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChh
Q psy16789 494 ------SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFT-IGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTIN 566 (608)
Q Consensus 494 ------~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~-~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~ 566 (608)
...++|++|.+++++|+++.+++|+.+.+.|+ .++++|++++.+++++++++++++|+|+++..|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 12379999999999999999999998888888 78889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy16789 567 DIAFLTALTSTVFFVSEIKKAI 588 (608)
Q Consensus 567 ~w~~~~~~~~~~~~~~~l~K~~ 588 (608)
+|+++++++++.++++|++|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >KOG4383|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=172.88 Aligned_cols=378 Identities=16% Similarity=0.177 Sum_probs=237.3
Q ss_pred CCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcc------------
Q psy16789 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQ------------ 291 (608)
Q Consensus 224 ~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~------------ 291 (608)
++.+|.|++....+.+.+....|+.|-++-||.+..|-++....+..|+++|++..++..|+-.+-.+
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 78899999999999999999999999999999999999999999999999999765543332111000
Q ss_pred ------------------------cC----------------------------------------HHHHHHHhhcceEE
Q psy16789 292 ------------------------MT----------------------------------------EHQLQQVVNSVTVF 307 (608)
Q Consensus 292 ------------------------~~----------------------------------------~~~~~~~~~~~~v~ 307 (608)
+. .++++++..-+.+|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 00 01223333334589
Q ss_pred EEeCchhHHHHHHHHHHCCCEEEEEcCCcC--cHHHHHhCCeeEEeCCCCcHH--------------H------------
Q psy16789 308 YRVTPRHKLTIVKAFQANGVIVGMTGDGVN--DGVALKKADIGIAMGKQGTDV--------------C------------ 359 (608)
Q Consensus 308 ~r~~p~~K~~~v~~l~~~g~~v~~~GDg~N--D~~al~~A~vgia~~~~~~~~--------------a------------ 359 (608)
.+++|+.-.++++.+|++|+++++.|...| ..-.+-+||++|++..-..+. |
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 999999999999999999999999999987 344566799999985311111 0
Q ss_pred ----HhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhh
Q psy16789 360 ----KEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPP 435 (608)
Q Consensus 360 ----~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 435 (608)
.-+.|+.......-.+..+|+.+|.....+|+++.|.+.+.+......+++.++..|..|+-.+++|+.++..++.
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL 1132 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLL 1132 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHH
Confidence 1123444433345567888999999999999999999999999999999999999999999999999999998877
Q ss_pred Hhh-hccCCCCccccccC-CC-------CCCCCCcchHHHHHHHHHHHH--HHHH-HHHhhhhcc---c--------ccc
Q psy16789 436 AQS-LGVEPVDDDVKIQK-PR-------NVKEPMITRALVVNVLMSASI--IIVG-TLYVFKREM---S--------DNI 492 (608)
Q Consensus 436 ~~~-l~~~~~~~~~~~~~-P~-------~~~~~l~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~---~--------~~~ 492 (608)
.+. +-..++.+.+|.+. |. +.+..++....+ +....+.. +.++ .+..+--.+ + ++.
T Consensus 1133 ~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFil-kFsls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S 1211 (1354)
T KOG4383|consen 1133 FIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFIL-KFSLSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGS 1211 (1354)
T ss_pred HHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHhhhhhccccccceeeccCCC
Confidence 666 43455555555433 21 111111111111 11111111 1111 111111110 0 000
Q ss_pred cccc--------------cchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHH---------HHHHHHHHHHh
Q psy16789 493 VSKR--------------DTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAV---------CASVVGQLFVI 549 (608)
Q Consensus 493 ~~~~--------------~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~---------~~~i~~~~~ii 549 (608)
...+ ++...-.-.+.-.++..+...+..++.++....+|.||-+.+ ...+.+|+..-
T Consensus 1212 ~ddqa~a~FedfangL~saQkl~aa~iilH~ifiqIThih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~th 1291 (1354)
T KOG4383|consen 1212 ADDQALAEFEDFANGLGSAQKLLAAEIILHIIFIQITHIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTH 1291 (1354)
T ss_pred cCcccchhHHHHHhhhhhHHHHHHHHHHHHhheeEEEEEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhc
Confidence 0000 011111111111222222333334555555555665543332 22222222222
Q ss_pred cccccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q psy16789 550 YFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRSSKKQSMDF 607 (608)
Q Consensus 550 ~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~~~~~r~~~~~~ 607 (608)
+-. +--|+....|+..|++.++...++.+.+|++|..+-+.+.+ ++|||+|+|
T Consensus 1292 rd~--~VHfgldd~pLL~~~igcisi~iiVitNEiiKiheIR~~~R---~QkRqK~eF 1344 (1354)
T KOG4383|consen 1292 RDR--GVHFGLDDFPLLPLGIGCISICIIVITNEIIKIHEIRQFTR---EQKRQKFEF 1344 (1354)
T ss_pred ccc--ceeeccccchhHHHHHHHHheeeeeehhhHHHHHHHHHHHH---HHHhhhhee
Confidence 221 23466666788889888888888888999999887776664 677777765
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-17 Score=161.65 Aligned_cols=109 Identities=42% Similarity=0.693 Sum_probs=97.5
Q ss_pred hhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccch
Q psy16789 208 QTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGD 287 (608)
Q Consensus 208 ~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~ 287 (608)
...|...+.++. ++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||...
T Consensus 103 ~~~~~~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~-------- 169 (215)
T PF00702_consen 103 ESQGRTVIVLAV-----NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS-------- 169 (215)
T ss_dssp HHHHHHCEEEEE-----SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE--------
T ss_pred HhhCCcccceee-----cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc--------
Confidence 445555555554 6799999999999999999999999999999999999999999999999999432
Q ss_pred hhcccCHHHHHHHhhcceEEEEe--CchhH--HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCC
Q psy16789 288 QIDQMTEHQLQQVVNSVTVFYRV--TPRHK--LTIVKAFQANGVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~r~--~p~~K--~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~ 346 (608)
.++++. +|++| .++++.++..+..|+|+|||.||++|+++||
T Consensus 170 -----------------~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 -----------------IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----------------EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----------------cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 388999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.4e-14 Score=118.37 Aligned_cols=117 Identities=25% Similarity=0.322 Sum_probs=105.1
Q ss_pred ceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcce
Q psy16789 226 LCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVT 305 (608)
Q Consensus 226 l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 305 (608)
....+.++--.++-++++++|++|++. +++.+.|||..-+....|+..|++...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 356788888899999999999999999 999999999999999999999987653
Q ss_pred EEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCC--CCcHHHHhccCEEEe
Q psy16789 306 VFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGK--QGTDVCKEAADMILV 368 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~--~~~~~a~~~ad~v~~ 368 (608)
+++-..|+.|..+++.+++.++.|.|+|||.||.+|+++||+||+.-+ +..+.+.++||+++.
T Consensus 73 v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 788888999999999999999999999999999999999999998742 345666789999886
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.5e-14 Score=117.38 Aligned_cols=79 Identities=32% Similarity=0.514 Sum_probs=67.5
Q ss_pred hhhhceeeeCC------ccccCchHHHHHHHHHhcCc----hhhhhhcccccccccccccccceeeecCCCCCccccceE
Q psy16789 43 CVCNNASIIGD------SLLGQPTEGALLAAGMKFGL----YAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTR 112 (608)
Q Consensus 43 ~l~n~a~~~~~------~~~G~pte~All~~~~~~g~----~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~ 112 (608)
+|||++.+..+ +..|||||.||+.++.++|. ...+..++++.++||+|+||+|+|+++ + +...
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~-----~~~~ 73 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--N-----DGKY 73 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--C-----CCEE
Confidence 58999998532 27899999999999999964 478899999999999999999999998 2 2346
Q ss_pred EEEccchhh-hhccccc
Q psy16789 113 FFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 113 ~~~~kg~~e-i~~lc~~ 128 (608)
++++||++| ++..|+.
T Consensus 74 ~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 74 ILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEcCCChHHHHHhcCC
Confidence 779999999 9999975
|
|
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-13 Score=146.63 Aligned_cols=127 Identities=26% Similarity=0.343 Sum_probs=96.0
Q ss_pred cccceeeeecCccceecccccCcCCCC------------CCCchHHHHHHHHhhhhhceeeeCCcc-----ccCchHHHH
Q psy16789 2 KLFDLIRLEFRPSFLEKVHGDGRNSSR------------IRSKPETGTLLEVGCVCNNASIIGDSL-----LGQPTEGAL 64 (608)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~~l~n~a~~~~~~~-----~G~pte~Al 64 (608)
|+|..+..+-.. .-++++|.+|.+.+ ..+.+.+.++++++++||++.+..++. +|+|||+||
T Consensus 352 ~i~~~~~~~~~~-~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL 430 (972)
T KOG0202|consen 352 KIFIPDGGTATV-DEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGAL 430 (972)
T ss_pred EEEecccccccc-cccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHH
Confidence 344444443332 22455677766554 235578999999999999999886665 999999999
Q ss_pred HHHHHhcCchhhh-----------------hhcccccccccccccccceeeecCCCCCccccceEEEEccchhh-hhccc
Q psy16789 65 LAAGMKFGLYAVN-----------------EHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVC 126 (608)
Q Consensus 65 l~~~~~~g~~~~~-----------------~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc 126 (608)
..++.|+|+.+.+ +.++++.++||+|+||+|++.|.++.+. ..+..|+||++| ++..|
T Consensus 431 ~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~----~~~~~fvKGA~E~Vl~rc 506 (972)
T KOG0202|consen 431 IVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQ----SGYKMFVKGAPESVLERC 506 (972)
T ss_pred HHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCC----ccceEEecCChHHHHHhh
Confidence 9999999985422 3345669999999999999999987753 456889999999 99999
Q ss_pred cceeeec
Q psy16789 127 NNASIIG 133 (608)
Q Consensus 127 ~~a~~~~ 133 (608)
++.....
T Consensus 507 s~~~~~~ 513 (972)
T KOG0202|consen 507 STYYGSD 513 (972)
T ss_pred hcEEccC
Confidence 8765544
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2e-10 Score=134.92 Aligned_cols=123 Identities=20% Similarity=0.206 Sum_probs=87.9
Q ss_pred HHHHHHHHhhhhhceeee--CC---------cccc-CchHHHHHHHHHhcCc--------------hhhhhhcccccccc
Q psy16789 34 ETGTLLEVGCVCNNASII--GD---------SLLG-QPTEGALLAAGMKFGL--------------YAVNEHYVRLKEYP 87 (608)
Q Consensus 34 ~~~~ll~~~~l~n~a~~~--~~---------~~~G-~pte~All~~~~~~g~--------------~~~~~~~~~v~~~p 87 (608)
...+++.+.++||++... .+ .+.| +|+|.||+.+|.+.|+ ...++++++++++|
T Consensus 531 ~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~p 610 (1178)
T PLN03190 531 HVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHE 610 (1178)
T ss_pred HHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEec
Confidence 356789999999998763 11 1445 9999999999999985 24567889999999
Q ss_pred cccccccceeeecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCcccccccccccee
Q psy16789 88 FSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKE 166 (608)
Q Consensus 88 F~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~ 166 (608)
|+|+||+|+|++++++++ ..+++||++| ++.+|+.... ...-...+..+-++|. .|++...-.|+.+..
T Consensus 611 F~S~rKrMSvIv~~~~~~------~~l~~KGA~e~il~~~~~~~~---~~~~~~~~~~l~~~a~-~GlRtL~lA~k~l~~ 680 (1178)
T PLN03190 611 FDSDRKRMSVILGCPDKT------VKVFVKGADTSMFSVIDRSLN---MNVIRATEAHLHTYSS-LGLRTLVVGMRELND 680 (1178)
T ss_pred ccccccEEEEEEEcCCCc------EEEEEecCcHHHHHhhccccc---chhHHHHHHHHHHHHh-cCCceEEEEEEeCCH
Confidence 999999999999875543 6899999999 8899975210 0011224455555654 377665545555543
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.7e-13 Score=109.32 Aligned_cols=79 Identities=37% Similarity=0.543 Sum_probs=65.5
Q ss_pred ccccceeeecc------ccCCCccHHHHHHHHHHcCcc----ccccccccceeeeCChHHHHHHhHhhhcCCc-CCCCch
Q psy16789 124 CVCNNASIIGD------SLLGQPTEGALLAAGMKFGLY----AVNEHYVRLKEYPFSSEQKMMAVRVHKIGHN-LPSKRD 192 (608)
Q Consensus 124 ~lc~~a~~~~~------~~~gdp~E~Al~~~~~~~~~~----~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~-~~~kg~ 192 (608)
++||++.+..+ ...|||+|.||++++.+.|.. ..+..|++++++||||++|+|++++++.+.. +++|||
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~~~~~~~~~~KGA 80 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVRNDGKYILYVKGA 80 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEeCCCEEEEEcCCC
Confidence 48999887332 289999999999999998643 3567899999999999999999999744434 499999
Q ss_pred hHHHHhhhhh
Q psy16789 193 GKMILSQSCS 202 (608)
Q Consensus 193 ~~~~~~~~~~ 202 (608)
++.++++|..
T Consensus 81 ~e~il~~Ct~ 90 (91)
T PF13246_consen 81 PEVILDRCTH 90 (91)
T ss_pred hHHHHHhcCC
Confidence 9999998864
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.1e-11 Score=119.75 Aligned_cols=67 Identities=31% Similarity=0.347 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..|+++|||.||.+|++.|++|+||+ |+.+.+|+.||+|..+++-+++.++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 566666665543 3 45999999999999999999999999 9999999999999999999999998854
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=9e-11 Score=117.50 Aligned_cols=151 Identities=26% Similarity=0.349 Sum_probs=108.3
Q ss_pred EEeeecCC-CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-----------Cccccchhhc-------
Q psy16789 230 GLVGICDP-PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-----------GKVLSGDQID------- 290 (608)
Q Consensus 230 G~~~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-----------~~vi~g~~~~------- 290 (608)
|++.-.+. +.+.+.++|+++++.|++++++|||+...+..+.+++++..+. +.++....++
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 8999999999999999999999999999999999999996420 0000000000
Q ss_pred ---------------------------------------------------------c---cCHHHHHHHhh-----cce
Q psy16789 291 ---------------------------------------------------------Q---MTEHQLQQVVN-----SVT 305 (608)
Q Consensus 291 ---------------------------------------------------------~---~~~~~~~~~~~-----~~~ 305 (608)
. ...+++...+. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 00111111111 111
Q ss_pred EEE-------EeCch--hHHHHHHHHHH-CCC---EEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCc
Q psy16789 306 VFY-------RVTPR--HKLTIVKAFQA-NGV---IVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDF 372 (608)
Q Consensus 306 v~~-------r~~p~--~K~~~v~~l~~-~g~---~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~ 372 (608)
.+. ...|. +|...++.+.+ .|. .|+++||+.||.+||+.|+.||||+ |+.+.+|+.||++..+++.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccc
Confidence 222 22332 78888887766 354 4999999999999999999999999 9999999999999899999
Q ss_pred chHHHHHHH
Q psy16789 373 NTIIAAIEE 381 (608)
Q Consensus 373 ~~i~~~i~~ 381 (608)
+|+.++|++
T Consensus 251 ~Gv~~~l~~ 259 (264)
T COG0561 251 DGVAEALEK 259 (264)
T ss_pred hHHHHHHHH
Confidence 999999865
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.8e-11 Score=119.41 Aligned_cols=143 Identities=17% Similarity=0.240 Sum_probs=100.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CCccc-c--ch-----hh---------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HGKVL-S--GD-----QI--------------- 289 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~~vi-~--g~-----~~--------------- 289 (608)
.+.+.+.++|++++++|++++++|||+...+..+.+++|+..+ ++..+ + +. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 4889999999999999999999999999999999999998432 10000 0 00 00
Q ss_pred -------------------------------------ccc------------CHHH---HHHHhh-----cceE------
Q psy16789 290 -------------------------------------DQM------------TEHQ---LQQVVN-----SVTV------ 306 (608)
Q Consensus 290 -------------------------------------~~~------------~~~~---~~~~~~-----~~~v------ 306 (608)
... .+++ +.+.+. ...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000 0011 111110 0111
Q ss_pred EEEeCch--hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCE--EEecCCcchHHHH
Q psy16789 307 FYRVTPR--HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADM--ILVDDDFNTIIAA 378 (608)
Q Consensus 307 ~~r~~p~--~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~--v~~~~~~~~i~~~ 378 (608)
+...+|. .|...++.+.+. | ..|+++|||.||.+||+.|+.|+||+ |+.+.+|++||+ ++.+++.+|+.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 1123333 577777776554 3 45999999999999999999999999 999999999996 7778899999998
Q ss_pred HH
Q psy16789 379 IE 380 (608)
Q Consensus 379 i~ 380 (608)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 85
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=114.40 Aligned_cols=151 Identities=23% Similarity=0.283 Sum_probs=106.1
Q ss_pred EEeeecCC-CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CCc-ccc---chh-----hc-----
Q psy16789 230 GLVGICDP-PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HGK-VLS---GDQ-----ID----- 290 (608)
Q Consensus 230 G~~~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~~-vi~---g~~-----~~----- 290 (608)
|++.-.|. +.+.+.++|++++++|++++++|||+...+..+.+.+|+..+ ++. +.. +.. ++
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 44443444 778999999999999999999999999999999999998532 111 110 000 00
Q ss_pred -------------------------------ccCHHHHHHHhhcc----eE-----EEEeCch--hHHHHHHHHHHC-C-
Q psy16789 291 -------------------------------QMTEHQLQQVVNSV----TV-----FYRVTPR--HKLTIVKAFQAN-G- 326 (608)
Q Consensus 291 -------------------------------~~~~~~~~~~~~~~----~v-----~~r~~p~--~K~~~v~~l~~~-g- 326 (608)
....+++.+.+.+. .+ +....|. .|...++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00011122222111 11 1233333 477777766543 3
Q ss_pred --CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 327 --VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 327 --~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..++++||+.||.+|++.|++|++|+ |+.+.+|+.||++..+++-+|+.++|++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 45999999999999999999999999 9999999999999999999999998853
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.5e-09 Score=122.69 Aligned_cols=94 Identities=30% Similarity=0.435 Sum_probs=77.5
Q ss_pred CCchHHHHHHHHhhhhhceeeeC--CccccCchHHHHHHHHHhcCc--h--hhhhhcccccccccccccccceeeecCCC
Q psy16789 30 RSKPETGTLLEVGCVCNNASIIG--DSLLGQPTEGALLAAGMKFGL--Y--AVNEHYVRLKEYPFSSEQKMMAVRCIPKE 103 (608)
Q Consensus 30 ~~~~~~~~ll~~~~l~n~a~~~~--~~~~G~pte~All~~~~~~g~--~--~~~~~~~~v~~~pF~s~~k~m~v~~~~~~ 103 (608)
..++...+++..+++||++.... +...|||||.||++++.+.|. . .++..+++++++||+|+||+|++++++++
T Consensus 384 ~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~ 463 (917)
T COG0474 384 KDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDE 463 (917)
T ss_pred ccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCC
Confidence 34456667899999999988654 345899999999999999886 3 56677889999999999999999998554
Q ss_pred CCccccceEEEEccchhh-hhccccce
Q psy16789 104 GSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 104 gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
|. +.+++||++| ++..|...
T Consensus 464 ~~------~~~~~KGApe~il~~~~~~ 484 (917)
T COG0474 464 GK------YILFVKGAPEVILERCKSI 484 (917)
T ss_pred Cc------EEEEEcCChHHHHHHhccc
Confidence 32 7899999999 88888763
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=116.23 Aligned_cols=67 Identities=21% Similarity=0.230 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC--EEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD--MILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad--~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..|+++||+.||.+||+.|+.|+||+ |+.+.+|+.|| +++.+++.+|+.++|++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 466666665543 3 35999999999999999999999999 99999999988 78888999999998853
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-10 Score=111.80 Aligned_cols=142 Identities=19% Similarity=0.256 Sum_probs=101.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CC-ccccc-hhh--cc-----------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HG-KVLSG-DQI--DQ----------------- 291 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~-~vi~g-~~~--~~----------------- 291 (608)
++.+++.++|++++++|++++++|||+...+..+++.+++..+ ++ .+... ..+ ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 3889999999999999999999999999999999999998532 11 11110 000 00
Q ss_pred ------------------cCHHHHHHHhhcc--eE-----EEEeC--chhHHHHHHHHHHC-C---CEEEEEcCCcCcHH
Q psy16789 292 ------------------MTEHQLQQVVNSV--TV-----FYRVT--PRHKLTIVKAFQAN-G---VIVGMTGDGVNDGV 340 (608)
Q Consensus 292 ------------------~~~~~~~~~~~~~--~v-----~~r~~--p~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~ 340 (608)
...+.+.+.+.+. .+ +...+ ...|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011122222111 11 11222 34788888777653 3 35899999999999
Q ss_pred HHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 341 ALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 341 al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
|++.|++|++|+ |+.+.+|+.||++..+++-+++.++|
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999 99999999999999888888887653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.6e-10 Score=122.95 Aligned_cols=67 Identities=33% Similarity=0.384 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..|+++|||.||.+||+.|++||||+ |+.+.+|+.||+|..+++.+||.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 344444444332 2 35999999999999999999999999 9999999999999999999999998863
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.6e-10 Score=112.33 Aligned_cols=67 Identities=30% Similarity=0.380 Sum_probs=56.4
Q ss_pred hHHHHHHHHHH-CC---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQA-NG---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~-~g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+ .| ..++++||+.||.+|++.|++|++|+ |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 46655554433 33 35999999999999999999999999 8999999999999999999999998853
|
|
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.8e-12 Score=133.75 Aligned_cols=264 Identities=17% Similarity=0.165 Sum_probs=168.3
Q ss_pred ccCchHH--HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---------------cc
Q psy16789 56 LGQPTEG--ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---------------HR 118 (608)
Q Consensus 56 ~G~pte~--All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---------------kg 118 (608)
+++-+|+ |.++.++.+-.++|++++..++.+...++.+..+++|.|++||+|||.+.+..+ +|
T Consensus 325 vAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~ 404 (1019)
T KOG0203|consen 325 VANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSG 404 (1019)
T ss_pred EecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhc
Confidence 4555565 444555555557889999999999999999999999999999999998877542 22
Q ss_pred ------------hhhhhccccceeeecc---------ccCCCccHHHHHHHHHHcC--ccccccccccceeeeCChHHHH
Q psy16789 119 ------------LLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFG--LYAVNEHYVRLKEYPFSSEQKM 175 (608)
Q Consensus 119 ------------~~ei~~lc~~a~~~~~---------~~~gdp~E~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ 175 (608)
...+..+||.|....+ ...||+.|.||+++++..- ....++.++.+.++||+|.+|.
T Consensus 405 ~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Ky 484 (1019)
T KOG0203|consen 405 QSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKY 484 (1019)
T ss_pred ccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccce
Confidence 1127789999887433 4789999999999998632 2345677889999999999999
Q ss_pred HHhHhhhc-----CCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHH
Q psy16789 176 MAVRVHKI-----GHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLL 250 (608)
Q Consensus 176 m~v~~~~~-----~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~ 250 (608)
...+-+.. ...+..||++|.++++|+...-...+. .+..+.+++..++-.++-
T Consensus 485 qlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~----------------------pld~~~~~~f~~ay~~lg 542 (1019)
T KOG0203|consen 485 QLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEK----------------------PLDEKLKEAFQEAYLELG 542 (1019)
T ss_pred EEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCC----------------------CcCHHHHHHHHHHHHHhh
Confidence 77654321 223478999999999998765331110 112233444555555555
Q ss_pred hCCCeEEEEcCCcHHHHHHHHHHcCCCC--CCCccccchhhcccCHHHHHHHhhcceEEEEeCch--hHHHHHHHHHHCC
Q psy16789 251 QSGVKVKLVTGDGQETATAIASMVGLDT--IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR--HKLTIVKAFQANG 326 (608)
Q Consensus 251 ~~Gi~v~~~TGd~~~ta~~ia~~~gi~~--~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~--~K~~~v~~l~~~g 326 (608)
..|-||. ..|...=... +.....+-+... ...+ .+..+...+-+.|. .-.+.|..|+..|
T Consensus 543 ~~GerVl-----------gF~~~~l~~~~~p~~~~f~~d~~n-~p~~----nl~FlGl~s~idPPR~~vP~Av~~CrsAG 606 (1019)
T KOG0203|consen 543 GLGERVL-----------GFCDLELPDEKFPRGFQFDTDDVN-FPTD----NLRFLGLISMIDPPRAAVPDAVGKCRSAG 606 (1019)
T ss_pred hcchHHH-----------HHHHHhcchhcCCCceEeecCCCC-Ccch----hccccchhhccCCCcccCchhhhhhhhhC
Confidence 5665543 2222111100 000011101100 0000 11112223333332 3347899999999
Q ss_pred CEEEE-EcCCcCcHHHHHhCCeeEEeCCCCcHH
Q psy16789 327 VIVGM-TGDGVNDGVALKKADIGIAMGKQGTDV 358 (608)
Q Consensus 327 ~~v~~-~GDg~ND~~al~~A~vgia~~~~~~~~ 358 (608)
.+|.| +||..-.+.|+. .+|||.-+++++..
T Consensus 607 IkvimVTgdhpiTAkAiA-~~vgIi~~~~et~e 638 (1019)
T KOG0203|consen 607 IKVIMVTGDHPITAKAIA-KSVGIISEGSETVE 638 (1019)
T ss_pred ceEEEEecCccchhhhhh-hheeeecCCchhhh
Confidence 98888 999999999998 78998876444433
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.5e-10 Score=107.65 Aligned_cols=143 Identities=20% Similarity=0.262 Sum_probs=100.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CC-ccccch--------hhcc------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HG-KVLSGD--------QIDQ------------ 291 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~-~vi~g~--------~~~~------------ 291 (608)
.+.+.+.++|++++++|++++++|||+...+..+.+.+|+..+ ++ .+...+ .+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 3778999999999999999999999999999999999996422 11 011000 0000
Q ss_pred ---------------------cCHHHHHHHhhcce----E-----EEEeCc--hhHHHHHHHHHHC-C---CEEEEEcCC
Q psy16789 292 ---------------------MTEHQLQQVVNSVT----V-----FYRVTP--RHKLTIVKAFQAN-G---VIVGMTGDG 335 (608)
Q Consensus 292 ---------------------~~~~~~~~~~~~~~----v-----~~r~~p--~~K~~~v~~l~~~-g---~~v~~~GDg 335 (608)
.+.+.+.....+.. + +....| ..|...++.+.+. | ..++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00111111111111 1 122233 3688777776553 3 469999999
Q ss_pred cCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch----HHHHHH
Q psy16789 336 VNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT----IIAAIE 380 (608)
Q Consensus 336 ~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~----i~~~i~ 380 (608)
.||.+|++.|++|++|+ |+.+.+|+.||+|..+++.++ +.+.++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999998889999 666654
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.3e-10 Score=110.21 Aligned_cols=143 Identities=25% Similarity=0.325 Sum_probs=101.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC------------CCccccchhhc-------------
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI------------HGKVLSGDQID------------- 290 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~------------~~~vi~g~~~~------------- 290 (608)
..+.+++.+++++++++|+++++.|||+...+..+.+++++..+ .+.++.-..++
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 44779999999999999999999999999999999999998521 00000000000
Q ss_pred -----------------c------------------------------------cCHH-------HHHHHhhcceEE---
Q psy16789 291 -----------------Q------------------------------------MTEH-------QLQQVVNSVTVF--- 307 (608)
Q Consensus 291 -----------------~------------------------------------~~~~-------~~~~~~~~~~v~--- 307 (608)
. .+.+ ++.+.......+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0 0011 112222211111
Q ss_pred ----EEeCc--hhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 308 ----YRVTP--RHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 308 ----~r~~p--~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
...+| ..|...++.+.+. ...++++||+.||.+|++.||.|++|+ |+.+..+..||+++...+-+++++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 12333 3788888877653 357999999999999999999999999 999999999999999887799987
Q ss_pred HH
Q psy16789 378 AI 379 (608)
Q Consensus 378 ~i 379 (608)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 65
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-09 Score=104.42 Aligned_cols=131 Identities=18% Similarity=0.134 Sum_probs=95.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.+.|+.+++.| ++.++||.....+..+++++|+.......+..++-.. +... . ...++.|.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~---------~tG~-~--~~~~~~K~ 134 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---------VVGY-Q--LRQKDPKR 134 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCe---------eECe-e--ecCcchHH
Confidence 57899999999999975 9999999999999999999999753321111000000 0000 0 13467899
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~g 382 (608)
..++.+++.|..+.++|||.||.+|++.||+|+++. +.+..+++||-.-.-.+.+.+...+.++
T Consensus 135 ~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 135 QSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 999999888888999999999999999999999996 6666666665433334666666666554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.6e-09 Score=110.18 Aligned_cols=130 Identities=22% Similarity=0.269 Sum_probs=97.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE-EeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY-RVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~-r~~p~~K 315 (608)
++.+++.+.++.|++.|+++.++||.....+..+.+++|+...... .++-.. . .+. ..+.. -+..+.|
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an-----~lei~d-g----~lt-g~v~g~iv~~k~K 249 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN-----ELEIMD-G----KLT-GNVLGDIVDAQYK 249 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe-----EEEEEC-C----EEE-eEecCccCCcccH
Confidence 4789999999999999999999999998888899999998642111 000000 0 000 00000 0234578
Q ss_pred HHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 316 LTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 316 ~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.++.+.+. | ..+.++|||.||.+|++.||+|+++ |+.+..++.||.++...++++++.++
T Consensus 250 ~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 250 ADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred HHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 8888777654 3 5799999999999999999999999 78999999999999888888888765
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.7e-09 Score=102.27 Aligned_cols=151 Identities=17% Similarity=0.163 Sum_probs=99.0
Q ss_pred EEeeecCC-CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CC-ccccchh--------h--cccC
Q psy16789 230 GLVGICDP-PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HG-KVLSGDQ--------I--DQMT 293 (608)
Q Consensus 230 G~~~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~-~vi~g~~--------~--~~~~ 293 (608)
|++.-.+. ..+.+.++|++++++|++++++|||+...+..+.+++|+..+ ++ .+..... + ..++
T Consensus 8 GTll~~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~ 87 (256)
T TIGR01486 8 GTLLDPHGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIP 87 (256)
T ss_pred CCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCC
Confidence 33333343 445789999999999999999999999999999999997432 11 1111100 0 0001
Q ss_pred HHH-----------------------------------------------------------HHHHhhc--ceE-----E
Q psy16789 294 EHQ-----------------------------------------------------------LQQVVNS--VTV-----F 307 (608)
Q Consensus 294 ~~~-----------------------------------------------------------~~~~~~~--~~v-----~ 307 (608)
.+. +.+.+.+ +.+ +
T Consensus 88 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 167 (256)
T TIGR01486 88 YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRF 167 (256)
T ss_pred HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCce
Confidence 000 0001110 111 1
Q ss_pred EEeCc--hhHHHHHHHHHHC------CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc---HHHHhc--c-CEEEecCCcc
Q psy16789 308 YRVTP--RHKLTIVKAFQAN------GVIVGMTGDGVNDGVALKKADIGIAMGKQGT---DVCKEA--A-DMILVDDDFN 373 (608)
Q Consensus 308 ~r~~p--~~K~~~v~~l~~~------g~~v~~~GDg~ND~~al~~A~vgia~~~~~~---~~a~~~--a-d~v~~~~~~~ 373 (608)
....| ..|...++.+.+. ...++++||+.||.+|++.||+|+||+ |+. +..|+. | +++..+++-+
T Consensus 168 ~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~d 246 (256)
T TIGR01486 168 YHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPE 246 (256)
T ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcH
Confidence 11222 2577666655433 456999999999999999999999999 776 468876 4 5888899999
Q ss_pred hHHHHHHH
Q psy16789 374 TIIAAIEE 381 (608)
Q Consensus 374 ~i~~~i~~ 381 (608)
|+.+++++
T Consensus 247 Gva~~l~~ 254 (256)
T TIGR01486 247 GWREALEH 254 (256)
T ss_pred HHHHHHHH
Confidence 99998864
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.9e-09 Score=104.44 Aligned_cols=65 Identities=28% Similarity=0.357 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+.+|+.|++++.+++.+++.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 577777776654 2 45999999999999999999999998 89999999999999999999987653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-09 Score=97.59 Aligned_cols=107 Identities=16% Similarity=0.234 Sum_probs=83.0
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
..|+.|+++|+++.++|+.+...+....+.+|+......+ ...|+....+++.++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~-------------------------kpkp~~~~~~~~~l~ 95 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI-------------------------KKKTEPYAQMLEEMN 95 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC-------------------------CCCHHHHHHHHHHcC
Confidence 4899999999999999999999999999999997422100 011222223333333
Q ss_pred HCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHH
Q psy16789 324 ANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTII 376 (608)
Q Consensus 324 ~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~ 376 (608)
-....++++||+.||.+|++.|+++++|+ |+.+.++..|++++..++-++.+
T Consensus 96 ~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 96 ISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred cCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCHH
Confidence 33457999999999999999999999999 99999999999998766655543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.5e-07 Score=106.37 Aligned_cols=91 Identities=41% Similarity=0.695 Sum_probs=75.7
Q ss_pred hHHHHHHHHhhhhhceeeeCC--ccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccc
Q psy16789 33 PETGTLLEVGCVCNNASIIGD--SLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVD 110 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~--~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~ 110 (608)
+...+++.++++||++..... ...|||+|.|++.++.+.|....++.+++++++||+|++|+|++++.++. ++
T Consensus 379 ~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~-----~~ 453 (884)
T TIGR01522 379 VAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQ-----DR 453 (884)
T ss_pred HHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcC-----CC
Confidence 456788999999999876533 45799999999999999888766778899999999999999999987542 23
Q ss_pred eEEEEccchhh-hhccccc
Q psy16789 111 TRFFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 111 ~~~~~~kg~~e-i~~lc~~ 128 (608)
.+..++||++| ++..|+.
T Consensus 454 ~~~~~~KGape~il~~c~~ 472 (884)
T TIGR01522 454 SEMCFMKGAYEQVLKYCTY 472 (884)
T ss_pred eEEEEEeCChHHHHHhhhh
Confidence 46889999999 9999975
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-08 Score=117.20 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=72.1
Q ss_pred hHHHHHHHHhhhhhceeeeC--Cc------cccCchHHHHHHHHHhcCchh----------------hhhhccccccccc
Q psy16789 33 PETGTLLEVGCVCNNASIIG--DS------LLGQPTEGALLAAGMKFGLYA----------------VNEHYVRLKEYPF 88 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~--~~------~~G~pte~All~~~~~~g~~~----------------~~~~~~~v~~~pF 88 (608)
+...+++.++++||++.... ++ ..|||+|.||+.+|.+.|..- ..+++++++++||
T Consensus 438 ~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF 517 (1057)
T TIGR01652 438 KRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEF 517 (1057)
T ss_pred HHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEeccc
Confidence 34677899999999987653 21 148999999999999998631 2246788999999
Q ss_pred ccccccceeeecCCCCCccccceEEEEccchhh-hhccccc
Q psy16789 89 SSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 89 ~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~ 128 (608)
+|+||+|++++++++| ...+++||++| ++.+|..
T Consensus 518 ~s~rKrmSviv~~~~~------~~~l~~KGA~e~il~~~~~ 552 (1057)
T TIGR01652 518 NSDRKRMSVIVRNPDG------RIKLLCKGADTVIFKRLSS 552 (1057)
T ss_pred CCCCCeEEEEEEeCCC------eEEEEEeCcHHHHHHHhhc
Confidence 9999999999987653 36789999999 8888874
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=98.94 E-value=8.6e-10 Score=129.06 Aligned_cols=92 Identities=28% Similarity=0.378 Sum_probs=73.0
Q ss_pred hHHHHHHHHhhhhhceeeeCC------ccccCchHHHHHHHHHhcCch--------hh-------------------hhh
Q psy16789 33 PETGTLLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLY--------AV-------------------NEH 79 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~------~~~G~pte~All~~~~~~g~~--------~~-------------------~~~ 79 (608)
+.+.+++.++++||++.+..+ ...|||||+||+.++.+.|.+ .. +.+
T Consensus 445 ~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1053)
T TIGR01523 445 DLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQ 524 (1053)
T ss_pred HHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccc
Confidence 346779999999999887532 357999999999999988862 11 234
Q ss_pred cccccccccccccccceeeecCCCCCccccceEEEEccchhh-hhccccce
Q psy16789 80 YVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 80 ~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
+++++++||+|+||+|++++++.++ ..+++++||++| ++..|+..
T Consensus 525 ~~~~~~~pFds~rK~msvv~~~~~~-----~~~~~~~KGApe~il~~c~~~ 570 (1053)
T TIGR01523 525 FEFIAEFPFDSEIKRMASIYEDNHG-----ETYNIYAKGAFERIIECCSSS 570 (1053)
T ss_pred cceEEEeccCCCCCeEEEEEEeCCC-----CEEEEEEeCChHHHHHhhhHh
Confidence 6789999999999999999875432 236789999999 99999753
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.4e-07 Score=107.20 Aligned_cols=90 Identities=29% Similarity=0.285 Sum_probs=70.9
Q ss_pred hHHHHHHHHhhhhhceeeeC------CccccCchHHHHHHHHHhcCch--hhhhhcccccccccccccccceeeecCCCC
Q psy16789 33 PETGTLLEVGCVCNNASIIG------DSLLGQPTEGALLAAGMKFGLY--AVNEHYVRLKEYPFSSEQKMMAVRCIPKEG 104 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~------~~~~G~pte~All~~~~~~g~~--~~~~~~~~v~~~pF~s~~k~m~v~~~~~~g 104 (608)
+...+++..+++||+..... ....|||+|.|++.++.+.|.+ ..++++++++++||+|++|+|++++...++
T Consensus 415 ~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~ 494 (941)
T TIGR01517 415 KHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGG 494 (941)
T ss_pred HHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCC
Confidence 44566778888888776432 1467999999999999887753 455677888999999999999999876432
Q ss_pred CccccceEEEEccchhh-hhccccc
Q psy16789 105 SSCDVDTRFFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 105 t~~~~~~~~~~~kg~~e-i~~lc~~ 128 (608)
.+.+++||++| ++..|+.
T Consensus 495 ------~~~~~~KGA~e~il~~c~~ 513 (941)
T TIGR01517 495 ------KVREFRKGASEIVLKPCRK 513 (941)
T ss_pred ------cEEEEEECChHHHHHhhhH
Confidence 36789999999 8899975
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.8e-07 Score=103.42 Aligned_cols=90 Identities=29% Similarity=0.429 Sum_probs=72.0
Q ss_pred hHHHHHHHHhhhhhceeeeCC------ccccCchHHHHHHHHHhcCchh------------------hhhhccccccccc
Q psy16789 33 PETGTLLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLYA------------------VNEHYVRLKEYPF 88 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~------~~~G~pte~All~~~~~~g~~~------------------~~~~~~~v~~~pF 88 (608)
+...+++.++++||++.+..+ ...|||||.||+.++.+.|.+. .++++++++++||
T Consensus 349 ~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF 428 (917)
T TIGR01116 349 AGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEF 428 (917)
T ss_pred HHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeeccc
Confidence 346678899999999876532 2369999999999999887531 2456779999999
Q ss_pred ccccccceeeecCCCCCccccceEEEEccchhh-hhccccce
Q psy16789 89 SSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 89 ~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
+|+||+|++++++. +.+.+++||++| ++..|+..
T Consensus 429 ~s~rK~msviv~~~-------~~~~~~~KGApe~il~~c~~~ 463 (917)
T TIGR01116 429 SRDRKSMSVLCKPS-------TGNKLFVKGAPEGVLERCTHI 463 (917)
T ss_pred ChhhCeEEEEEeeC-------CcEEEEEcCChHHHHHhccce
Confidence 99999999998753 235789999999 99999753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.1e-08 Score=100.68 Aligned_cols=143 Identities=14% Similarity=0.115 Sum_probs=95.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC-C----CC-ccccchh--------h-c-ccCHHH-----
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT-I----HG-KVLSGDQ--------I-D-QMTEHQ----- 296 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~-~----~~-~vi~g~~--------~-~-~~~~~~----- 296 (608)
+.+.+.++|++++++|++++++|||+...+..+.+++|+.. + ++ .+..... + . .++.+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 55789999999999999999999999999999999999842 1 11 1111100 0 0 011100
Q ss_pred --------------------------------------------------------HHHHhh--cceE-----EEEeCc-
Q psy16789 297 --------------------------------------------------------LQQVVN--SVTV-----FYRVTP- 312 (608)
Q Consensus 297 --------------------------------------------------------~~~~~~--~~~v-----~~r~~p- 312 (608)
+.+.+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 000000 0111 112233
Q ss_pred -hhHHHHHHHHHH-------CCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc-HH-----HHhccCEEEecCCcchHHHH
Q psy16789 313 -RHKLTIVKAFQA-------NGVIVGMTGDGVNDGVALKKADIGIAMGKQGT-DV-----CKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 313 -~~K~~~v~~l~~-------~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~-~~-----a~~~ad~v~~~~~~~~i~~~ 378 (608)
..|...++.+.+ ....|+++||+.||.+||+.|++|+||+ ++. +. .+..+|++....+-+|+.++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 267766666544 3357999999999999999999999999 433 21 45578999998899999988
Q ss_pred HHH
Q psy16789 379 IEE 381 (608)
Q Consensus 379 i~~ 381 (608)
+++
T Consensus 264 l~~ 266 (271)
T PRK03669 264 LDH 266 (271)
T ss_pred HHH
Confidence 864
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=97.78 Aligned_cols=119 Identities=24% Similarity=0.262 Sum_probs=88.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE-EeCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY-RVTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~-r~~p~~ 314 (608)
.++++++.+.++.++++|.+|+++||-...-+..+++.+|++...+..+.-++ .... . .+.. .+..+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~lt---------G-~v~g~~~~~~~ 144 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLT---------G-RVVGPICDGEG 144 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEe---------c-eeeeeecCcch
Confidence 56789999999999999999999999999999999999999875433332221 0000 0 1222 344578
Q ss_pred HHHHHHHHHH-CCC---EEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEE
Q psy16789 315 KLTIVKAFQA-NGV---IVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMIL 367 (608)
Q Consensus 315 K~~~v~~l~~-~g~---~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~ 367 (608)
|.+.++.+.+ .|. .+.+.|||.||.||++.||.++++. +.+..+..|+...
T Consensus 145 K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 145 KAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred HHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 8888865554 465 4999999999999999999999996 5555556666544
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.5e-08 Score=92.45 Aligned_cols=106 Identities=18% Similarity=0.241 Sum_probs=83.6
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH-
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ- 323 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~- 323 (608)
+|++|+++|+++.++||++...+..+.+.+|+.... ++ ...|.+.++.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~----~~-------------------------~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY----QG-------------------------QSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE----ec-------------------------ccchHHHHHHHHH
Confidence 899999999999999999999999999999987521 11 123444444433
Q ss_pred H---CCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch-HHHHHH
Q psy16789 324 A---NGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT-IIAAIE 380 (608)
Q Consensus 324 ~---~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~-i~~~i~ 380 (608)
+ ....++++||+.||.+|++.|++++++. ++.+..+..|++++.++.-++ +.++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 2 2457999999999999999999999998 788889999999998776555 655553
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.5e-08 Score=96.90 Aligned_cols=129 Identities=24% Similarity=0.282 Sum_probs=93.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-eCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-VTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-~~p~~K 315 (608)
++.+++.+.++.|+++|+++.++||.....+..+.+.+|+.......+.-++ . .+. ..+... ..+..|
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~--~--------~~~-~~~~~~~~~~~~k 153 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVED--G--------KLT-GLVEGPIVDASYK 153 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEEC--C--------EEE-EEecCcccCCccc
Confidence 5789999999999999999999999999999999999999753221111000 0 000 000001 113346
Q ss_pred HHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHH
Q psy16789 316 LTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 316 ~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
..+++.+.+. + ..+.++||+.+|.++.+.||++++++ +.+..+++||+++.+.++..+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 7777765544 3 35889999999999999999999985 678888999999998887766543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.4e-07 Score=94.88 Aligned_cols=67 Identities=21% Similarity=0.135 Sum_probs=54.2
Q ss_pred hHHHHHHHHHH----CC-CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHH----hcc-CEEE--ecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQA----NG-VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCK----EAA-DMIL--VDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~----~g-~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~----~~a-d~v~--~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+ .. ..|+++||+.||.+|++.|++|++|+ |+.+.+| .+| +.+. ..++-+|+.++|++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 56666665553 24 78999999999999999999999999 9999999 666 5666 56678899888853
|
|
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.4e-08 Score=106.02 Aligned_cols=94 Identities=31% Similarity=0.359 Sum_probs=78.7
Q ss_pred CCchHHHHHHHHhhhhhceeee--------CCccccCchHHHHHHHHHhcCc--hhhhhhcccccccccccccccceeee
Q psy16789 30 RSKPETGTLLEVGCVCNNASII--------GDSLLGQPTEGALLAAGMKFGL--YAVNEHYVRLKEYPFSSEQKMMAVRC 99 (608)
Q Consensus 30 ~~~~~~~~ll~~~~l~n~a~~~--------~~~~~G~pte~All~~~~~~g~--~~~~~~~~~v~~~pF~s~~k~m~v~~ 99 (608)
..++.+.+++..++..|+..-. ..+++|+|||+|||.++.++|. +.+|.+...++.+||+|+||+|.++.
T Consensus 472 ~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi 551 (1034)
T KOG0204|consen 472 NLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVI 551 (1034)
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEE
Confidence 4678899999999998864421 1147899999999999999987 47888889999999999999999999
Q ss_pred cCCCCCccccceEEEEccchhh-hhccccce
Q psy16789 100 IPKEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 100 ~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
..++|. .+ +++||+.| ++..|+.-
T Consensus 552 ~~~~~~-----~y-~~~KGAsEiVL~~C~~~ 576 (1034)
T KOG0204|consen 552 KLPDGG-----HY-VHWKGASEIVLKSCEYY 576 (1034)
T ss_pred EcCCCC-----eE-EEEcChHHHHHHhhhhe
Confidence 877653 24 99999999 99999873
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.1e-07 Score=89.36 Aligned_cols=101 Identities=18% Similarity=0.233 Sum_probs=79.4
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHH-
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAF- 322 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l- 322 (608)
.+++.|+++|+++.++||++...+..+++++|+..... ..+.|...++.+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~-----------------------------g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ-----------------------------GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec-----------------------------CCCcHHHHHHHHH
Confidence 68999999999999999999999999999999864221 123344444433
Q ss_pred HHCC---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch
Q psy16789 323 QANG---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT 374 (608)
Q Consensus 323 ~~~g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~ 374 (608)
++.| ..++|+||+.||.+|++.|+++++++ ++.+..+..||+++..+.-.+
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g 159 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRG 159 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCC
Confidence 3333 46999999999999999999999987 788888889999986544333
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.4e-07 Score=110.89 Aligned_cols=94 Identities=18% Similarity=0.191 Sum_probs=72.7
Q ss_pred hHHHHHHHHhhhhhceeeeCC---------ccccCchHHHHHHHHHhcCc--hhhhhhcccccccccccccccceeeecC
Q psy16789 33 PETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGL--YAVNEHYVRLKEYPFSSEQKMMAVRCIP 101 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~---------~~~G~pte~All~~~~~~g~--~~~~~~~~~v~~~pF~s~~k~m~v~~~~ 101 (608)
+....++.++++||++.+..+ ...|||+|.||+.++.+.+. ...+++++++.++||+|+||+|++++..
T Consensus 390 ~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~ 469 (997)
T TIGR01106 390 ATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHEN 469 (997)
T ss_pred HHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEec
Confidence 345578889999998876422 35799999999999986543 3567789999999999999999988754
Q ss_pred CCCCccccceEEEEccchhh-hhccccce
Q psy16789 102 KEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 102 ~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
.+.. ++.+.+++||++| ++..|+..
T Consensus 470 ~~~~---~~~~~~~~KGApe~Il~~c~~~ 495 (997)
T TIGR01106 470 EDPR---DPRHLLVMKGAPERILERCSSI 495 (997)
T ss_pred cCCC---CceEEEEEeCChHHHHHHhhHH
Confidence 2210 2346789999999 99999753
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.7e-07 Score=89.68 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC----EEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD----MILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad----~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.++ | ..++++||+.||.+|++.+++||+|+ |+.+.+|+.|+ ++...++-.++.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 677777777553 3 25899999999999999999999999 99999999999 88878888999998864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=7.8e-08 Score=83.79 Aligned_cols=114 Identities=20% Similarity=0.303 Sum_probs=90.7
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 324 (608)
.|+.+.+.||++.++||++....+.=++++|+..-. .--++|....+.+.+
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~-----------------------------qG~~dK~~a~~~L~~ 93 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLY-----------------------------QGISDKLAAFEELLK 93 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceee-----------------------------echHhHHHHHHHHHH
Confidence 689999999999999999999999999999997522 113467766655544
Q ss_pred C----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC----cchHHHHHHHHHHHHHh
Q psy16789 325 N----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD----FNTIIAAIEEGKGIFYN 388 (608)
Q Consensus 325 ~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~----~~~i~~~i~~gR~~~~~ 388 (608)
+ .+.|+++||-.||.|+++..++++|+. ++.+..++.||+|+.... ...+.++|..++..++-
T Consensus 94 ~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 94 KLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 3 356999999999999999999999998 999999999999986543 44456666666655443
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.3e-07 Score=88.70 Aligned_cols=117 Identities=24% Similarity=0.193 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++++++.+.++.|+++|+++.++|+.....+..+++.+|+.......+..++-....+ ..+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p----------~~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQP----------DGIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEec----------ceeeEEccccHH
Confidence 4789999999999999999999999999999999999998643222221111000000 011223456677
Q ss_pred HHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC
Q psy16789 317 TIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364 (608)
Q Consensus 317 ~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad 364 (608)
++++.+.+. ...+.++||+.+|.+|++.||++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 776665443 346999999999999999999999997 44444555554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.8e-05 Score=83.63 Aligned_cols=94 Identities=20% Similarity=0.218 Sum_probs=72.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
|.++++.+.+++++++|+++.++|+.+...+..+++.+|+. +.++.+++.. +..|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF---d~Vigsd~~~------------------~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF---DGVFASDGTT------------------NLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CEEEeCCCcc------------------ccCCchHH
Confidence 47899999999999999999999999999999999999982 2344443321 23466676
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
+.++..... +.+.++||+.+|.++.+.|+-.++++
T Consensus 131 ~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 131 AALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred HHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 544422111 22567899999999999999999997
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.8e-07 Score=85.78 Aligned_cols=125 Identities=26% Similarity=0.303 Sum_probs=88.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE--EeCchh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY--RVTPRH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~--r~~p~~ 314 (608)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.......+..++-. .+.. -..|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------------~i~~~~~~~p~~ 132 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG--------------MITGYDLRQPDG 132 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------eEECccccccch
Confidence 4579999999999999 9999999999999999999999864321111110000 0000 013677
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCE-EEecCCcchHHHHH
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADM-ILVDDDFNTIIAAI 379 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~-v~~~~~~~~i~~~i 379 (608)
|...++.++..+..+.|+|||.||.+|.+.|++|+..+ .........+++ ++ +++..+.+.+
T Consensus 133 k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc--CCHHHHHHHH
Confidence 88888888888899999999999999999999999876 333333344554 33 2455554444
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.4e-07 Score=86.13 Aligned_cols=126 Identities=21% Similarity=0.375 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
..+-++++++++.|+++|++..++|+++...+..+.+..|+......++.+++....+ ..|...
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~K----------------P~P~~l 151 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPK----------------PDPEPL 151 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCC----------------cCHHHH
Confidence 4678999999999999999999999999999999999999998776666545443322 124444
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCC---eeEEeCCC-CcHHHHhccCEEEecCCcchHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKAD---IGIAMGKQ-GTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~---vgia~~~~-~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
..+.+.+....+.++|+||+.+|+.|-+.|+ +|+..|.+ +.......+|+++. ++..+...+
T Consensus 152 ~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 152 LLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred HHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 4444544444347999999999999999999 77777743 45566667898875 455544433
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.45 E-value=2e-06 Score=85.23 Aligned_cols=145 Identities=14% Similarity=0.152 Sum_probs=98.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC------Cccc-cch-hhc-----------------
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH------GKVL-SGD-QID----------------- 290 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~------~~vi-~g~-~~~----------------- 290 (608)
.+..+.+.+++++++++|++++++|||.....+.+.+++++..+. +..+ .+. ...
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 446789999999999999999999999999999999988886542 1111 000 000
Q ss_pred --------cc-----------------CH-------HHHHHHhhc----ceE-EE-----EeCc--hhHHHHHHHHHHC-
Q psy16789 291 --------QM-----------------TE-------HQLQQVVNS----VTV-FY-----RVTP--RHKLTIVKAFQAN- 325 (608)
Q Consensus 291 --------~~-----------------~~-------~~~~~~~~~----~~v-~~-----r~~p--~~K~~~v~~l~~~- 325 (608)
.+ .. +++.+.+.+ +.+ .+ ...| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 00 111222211 111 11 2333 3788888887654
Q ss_pred ---CCEEEEEcCCcCcHHHHHh-CCeeEEeCCCCcHHHHhccC-------EEEecCCcchHHHHHHH
Q psy16789 326 ---GVIVGMTGDGVNDGVALKK-ADIGIAMGKQGTDVCKEAAD-------MILVDDDFNTIIAAIEE 381 (608)
Q Consensus 326 ---g~~v~~~GDg~ND~~al~~-A~vgia~~~~~~~~a~~~ad-------~v~~~~~~~~i~~~i~~ 381 (608)
...|+++||+.||.+|++. ++.|++|+ |+.+..|+.++ ++.....-+|+.+++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 3569999999999999998 67999999 99988887543 66666677888887753
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.8e-07 Score=81.11 Aligned_cols=98 Identities=26% Similarity=0.341 Sum_probs=76.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC--Ccc---------ccchhhcccCHHHHHHHhhcceE
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH--GKV---------LSGDQIDQMTEHQLQQVVNSVTV 306 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~--~~v---------i~g~~~~~~~~~~~~~~~~~~~v 306 (608)
+.+++++.+..|++.|.++.++||--...+..+|.++||+..+ ... .++++....
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt-------------- 154 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPT-------------- 154 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCcc--------------
Confidence 5799999999999999999999999999999999999998632 111 111111110
Q ss_pred EEEeCchhHHHHHHHHHHC--CCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 307 FYRVTPRHKLTIVKAFQAN--GVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~~--g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
.....|.++++.+++. -..++|+|||.||.+|...|+.=++.+
T Consensus 155 ---sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 ---SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ---ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 1234788999999885 357899999999999999988777765
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.2e-07 Score=108.58 Aligned_cols=169 Identities=12% Similarity=0.122 Sum_probs=98.9
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhc-Cc-hh--h-------------hhhcccccccccccccccceee
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF-GL-YA--V-------------NEHYVRLKEYPFSSEQKMMAVR 98 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~-g~-~~--~-------------~~~~~~v~~~pF~s~~k~m~v~ 98 (608)
..++.+.+.||++....+...|||+|.|+++++... .. .+ . .+++.+++++||+|++|+|+++
T Consensus 491 ~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvv 570 (1054)
T TIGR01657 491 SITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVI 570 (1054)
T ss_pred hHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEE
Confidence 356778899999887666789999999999976321 10 00 0 2457788999999999999999
Q ss_pred ecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeeeCChHH--HH
Q psy16789 99 CIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQ--KM 175 (608)
Q Consensus 99 ~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~--k~ 175 (608)
++..+ +....+++||++| ++.+|+.... -+..+..+-+++. .|++...-.|+.+...+++... .|
T Consensus 571 v~~~~-----~~~~~~~~KGApE~Il~~c~~~~~------p~~~~~~~~~~a~-~G~RVLalA~k~l~~~~~~~~~~~~r 638 (1054)
T TIGR01657 571 VSTND-----ERSPDAFVKGAPETIQSLCSPETV------PSDYQEVLKSYTR-EGYRVLALAYKELPKLTLQKAQDLSR 638 (1054)
T ss_pred EEEcC-----CCeEEEEEECCHHHHHHHcCCcCC------ChhHHHHHHHHHh-cCCEEEEEEEeecCccchhhhhhccH
Confidence 87643 2335789999999 9999985211 1223334444544 3665544444444322211100 01
Q ss_pred HHhHhhhcCCcCCCC--chhHHHHhhhhhhhHHHhhccCceEEEEEc
Q psy16789 176 MAVRVHKIGHNLPSK--RDGKMILSQSCSEYPKFQTLGKGLVAMARG 220 (608)
Q Consensus 176 m~v~~~~~~~~~~~k--g~~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 220 (608)
-. ++. +.. +.+ +-.+.+-++..+.++.+.+.|.|+.-+.-+
T Consensus 639 ~~--~E~-~L~-flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD 681 (1054)
T TIGR01657 639 DA--VES-NLT-FLGFIVFENPLKPDTKEVIKELKRASIRTVMITGD 681 (1054)
T ss_pred HH--Hhc-Cce-EEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCC
Confidence 00 110 000 000 000012223455777888888888777654
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.6e-06 Score=82.99 Aligned_cols=128 Identities=18% Similarity=0.299 Sum_probs=88.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.++++|+++.++||........+.+..|+......+++++...... ..|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k----------------p~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKK----------------PDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCC----------------cChHHH
Confidence 4578999999999999999999999999999999999999976554444443322111 112222
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeC--CC-CcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMG--KQ-GTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~--~~-~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..+.+.++.....++++||+.+|+.+.+.+|+ +|.+. .. ..+.....+++++ +++..+...+.+
T Consensus 156 ~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 156 LLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 23444444445679999999999999999997 44443 11 2334455788877 467777666643
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.1e-06 Score=82.95 Aligned_cols=111 Identities=15% Similarity=0.097 Sum_probs=76.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC---CccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH---GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~---~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
-++++++.+.++.+++.|+++.++||........+.+.++..... ....+++.+....+. ....-+.....
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~------~~~~~~~~~cg 142 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH------PCDGTCQNQCG 142 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC------CCccccccCCC
Confidence 468999999999999999999999999999999888877543211 112222222111000 00000000113
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 313 RHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
..|..+++.++.....+.|+|||.||.+|.+.||+.++-+
T Consensus 143 ~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 143 CCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 4688999988887888999999999999999999987743
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.2e-07 Score=103.58 Aligned_cols=135 Identities=19% Similarity=0.229 Sum_probs=106.2
Q ss_pred CchHHHHHHHHhhhhhceeeeCC-c------cccCchHHHHHHHHHhcCch--------------hhhhhcccccccccc
Q psy16789 31 SKPETGTLLEVGCVCNNASIIGD-S------LLGQPTEGALLAAGMKFGLY--------------AVNEHYVRLKEYPFS 89 (608)
Q Consensus 31 ~~~~~~~ll~~~~l~n~a~~~~~-~------~~G~pte~All~~~~~~g~~--------------~~~~~~~~v~~~pF~ 89 (608)
.++...+++++.++|++...+.+ + ..-+|.|.||++.|..+|.. ...+.+.++..++|+
T Consensus 459 ~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~ 538 (1151)
T KOG0206|consen 459 QAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFN 538 (1151)
T ss_pred CcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccc
Confidence 45667788999999998887652 1 23599999999999999851 123678899999999
Q ss_pred cccccceeeecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeee
Q psy16789 90 SEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYP 168 (608)
Q Consensus 90 s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~p 168 (608)
|+||+|+|++++++|. .++++||+.. ++..++. ++......|+.++-+||.+ |+++.+-.|+.+.+-+
T Consensus 539 S~RKRMSVIVR~p~g~------i~LycKGADsvI~erL~~----~~~~~~e~T~~Hl~~yA~e-GLRTLc~A~r~l~e~e 607 (1151)
T KOG0206|consen 539 STRKRMSVIVRDPDGR------ILLYCKGADSVIFERLSK----NGEKLREKTQEHLEEYATE-GLRTLCLAYRELDEEE 607 (1151)
T ss_pred cccceeEEEEEcCCCc------EEEEEcCcchhhHhhhhh----cchHHHHHHHHHHHHHHhh-hhhHhhhhhhccCHHH
Confidence 9999999999999875 5899999999 8888875 2344456788888888876 7888777777777777
Q ss_pred CChHHHHH
Q psy16789 169 FSSEQKMM 176 (608)
Q Consensus 169 F~s~~k~m 176 (608)
|....++-
T Consensus 608 Y~~w~~~~ 615 (1151)
T KOG0206|consen 608 YEEWNERY 615 (1151)
T ss_pred HHHHHHHH
Confidence 76666553
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.30 E-value=3e-06 Score=81.27 Aligned_cols=125 Identities=19% Similarity=0.285 Sum_probs=84.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++||.+...+....+..|+......+++.++... ....|+--.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------------~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR----------------PKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC----------------CCCChHHHH
Confidence 5789999999999999999999999999999999999999765444444333211 011122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee---EEeCC-CCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG---IAMGK-QGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg---ia~~~-~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.+.++-....++++||+.+|+.+-+++|+. +..|. +..+..+..+|+++. ++..+..++
T Consensus 139 ~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred HHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 33333333356799999999999999999964 33442 233445667888874 454454433
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.1e-05 Score=78.63 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=81.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE------eC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR------VT 311 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r------~~ 311 (608)
+.+++.+.++.|+++|+++.++||.....+..+.+.+|+.... +.. ..+.... +..+.+. ..
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~-~~~~~~~---------~g~~~g~~~~~~~~~ 152 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFA-NQILFGD---------SGEYAGFDENEPTSR 152 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEE-eEEEEcC---------CCcEECccCCCcccC
Confidence 6799999999999999999999999999999999999996311 110 0000000 0000000 11
Q ss_pred chhHHHHHHHHHHC-C-CEEEEEcCCcCcHHHHHh--CCeeEEeCCCC-cHHHHhccCEEEecCCcchHHH
Q psy16789 312 PRHKLTIVKAFQAN-G-VIVGMTGDGVNDGVALKK--ADIGIAMGKQG-TDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 312 p~~K~~~v~~l~~~-g-~~v~~~GDg~ND~~al~~--A~vgia~~~~~-~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
...|.+.++.+.+. | ..+.++||+.||..|.+. ++++++.+... .+.....+|+++. ++..+.+
T Consensus 153 ~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred CccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 23477777766554 3 578999999999999777 45556555222 2334556888875 4444433
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.8e-06 Score=79.49 Aligned_cols=92 Identities=27% Similarity=0.357 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch-h--HH
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR-H--KL 316 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~-~--K~ 316 (608)
+++.+.|+.++++|++++++||.....+..+++.+|+.... ++ +.++.... +.....+.++. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~-~~~~~~~~---------~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VI-GNELFDNG---------GGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EE-EEEEECTT---------CCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EE-EEeeeecc---------cceeeeeECCCCCCcHH
Confidence 77779999999999999999999999999999999997632 11 11111000 22345555555 4 99
Q ss_pred HHHHHH------HHCCCEEEEEcCCcCcHHHHH
Q psy16789 317 TIVKAF------QANGVIVGMTGDGVNDGVALK 343 (608)
Q Consensus 317 ~~v~~l------~~~g~~v~~~GDg~ND~~al~ 343 (608)
..++.+ +.....+.++|||.||.+|+|
T Consensus 160 ~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 999988 345789999999999999986
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.6e-06 Score=78.63 Aligned_cols=114 Identities=13% Similarity=0.128 Sum_probs=79.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-eCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-VTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-~~p~~ 314 (608)
-++.+++.+.++.|++.|+++.++|+.+......+.+..|+......+++.+...+. ...+.....++..+.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN-DGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-CCcEEEecCCCCccCcCCCCCC
Confidence 367899999999999999999999999999999999999987654444433221110 0000000001111111 12235
Q ss_pred HHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 315 KLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 315 K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
|.++++.+++. ...+.++|||.||..|.+.||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 88999998887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.4e-05 Score=77.63 Aligned_cols=40 Identities=18% Similarity=0.271 Sum_probs=36.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
.-+.+.++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3345899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=9.2e-06 Score=86.37 Aligned_cols=225 Identities=15% Similarity=0.175 Sum_probs=129.4
Q ss_pred CchHHHHHHHHhhhhhceeeeCCc------cccCchHHHHHHHHHhcCch---------------hhhhhcccccccccc
Q psy16789 31 SKPETGTLLEVGCVCNNASIIGDS------LLGQPTEGALLAAGMKFGLY---------------AVNEHYVRLKEYPFS 89 (608)
Q Consensus 31 ~~~~~~~ll~~~~l~n~a~~~~~~------~~G~pte~All~~~~~~g~~---------------~~~~~~~~v~~~pF~ 89 (608)
.+..+++...+.++|++.....+. ...+|.|+|++++....|+. +...+|.++..+||.
T Consensus 469 ~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFt 548 (1051)
T KOG0210|consen 469 MSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFT 548 (1051)
T ss_pred ccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccc
Confidence 346677889999999998865332 35799999999999988862 112478899999999
Q ss_pred cccccceeeecCCCCCccccceEEEEccchhhhh-ccccceeeeccccCCCccHHHHHHHHHHcCccc--------cccc
Q psy16789 90 SEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVG-CVCNNASIIGDSLLGQPTEGALLAAGMKFGLYA--------VNEH 160 (608)
Q Consensus 90 s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~ei~-~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~--------~~~~ 160 (608)
|+.|+|..++++.+ .+....+.||+.-++ ..-....+.++ -.|+- | +.|+++ ..++
T Consensus 549 sEtKRMGIIVr~e~-----~~evtfylKGAD~VMs~iVq~NdWleE-E~gNM--------A-REGLRtLVvakK~Ls~~e 613 (1051)
T KOG0210|consen 549 SETKRMGIIVRDET-----TEEVTFYLKGADVVMSGIVQYNDWLEE-ECGNM--------A-REGLRTLVVAKKVLSEEE 613 (1051)
T ss_pred cccceeeEEEecCC-----CceEEEEEecchHHHhcccccchhhhh-hhhhh--------h-hhcceEEEEEecccCHHH
Confidence 99999999999875 345677889988744 22221111100 01110 0 112221 1112
Q ss_pred ccc------ceeeeCChHHHHHHhHhhh-cCC--cCCC-CchhHHHHhhhhhhhHHHhhccCceEEEEEccCC-------
Q psy16789 161 YVR------LKEYPFSSEQKMMAVRVHK-IGH--NLPS-KRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNL------- 223 (608)
Q Consensus 161 ~~~------~~~~pF~s~~k~m~v~~~~-~~~--~~~~-kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e------- 223 (608)
|+. -....++...+.|+.++++ -.. .+.+ -|--+..=++....++-+...|.++--+.-..+|
T Consensus 614 ye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAk 693 (1051)
T KOG0210|consen 614 YEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAK 693 (1051)
T ss_pred HHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeeh
Confidence 211 1122344455666666542 111 1111 1211122223344566666777665433332221
Q ss_pred -----CCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q psy16789 224 -----QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA 271 (608)
Q Consensus 224 -----~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia 271 (608)
+.-..+-++ -+-.-|.++..-++.+|..+-...++.|++.+......
T Consensus 694 Ss~L~sR~q~ihv~-~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yy 745 (1051)
T KOG0210|consen 694 SSRLFSRGQYIHVI-RSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYY 745 (1051)
T ss_pred hccceecCceEEEE-EecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHH
Confidence 111111111 12235788999999999999999999999987765443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.22 E-value=1e-05 Score=85.75 Aligned_cols=140 Identities=17% Similarity=0.190 Sum_probs=92.3
Q ss_pred hHHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC------Cc-cccchhhc----------------------
Q psy16789 241 HVRECM-STLLQSGVKVKLVTGDGQETATAIASMVGLDTIH------GK-VLSGDQID---------------------- 290 (608)
Q Consensus 241 ~~~~~I-~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~------~~-vi~g~~~~---------------------- 290 (608)
...+++ +++++.|+.++++|||++.....+.++.++..+. +. +..+..+.
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 344455 8899999999999999999999999999886552 00 10000000
Q ss_pred ----c-----------------cCH-------HHHHHHhh----cceE------EEEeCch--hHHHHHHHHHHC----C
Q psy16789 291 ----Q-----------------MTE-------HQLQQVVN----SVTV------FYRVTPR--HKLTIVKAFQAN----G 326 (608)
Q Consensus 291 ----~-----------------~~~-------~~~~~~~~----~~~v------~~r~~p~--~K~~~v~~l~~~----g 326 (608)
. ..+ +++.+.+. .+.+ +..+.|. .|...++.+.+. |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0 001 11122221 1111 2244443 588888877654 3
Q ss_pred ---CEEEEEcCCcCcHHHHHhCC-eeEEeCCCCcHHHHhcc--------CEEE-ecCCcchHHHHHHH
Q psy16789 327 ---VIVGMTGDGVNDGVALKKAD-IGIAMGKQGTDVCKEAA--------DMIL-VDDDFNTIIAAIEE 381 (608)
Q Consensus 327 ---~~v~~~GDg~ND~~al~~A~-vgia~~~~~~~~a~~~a--------d~v~-~~~~~~~i~~~i~~ 381 (608)
..++++||+.||.+||+.++ .||+|+ |+.+..|+.+ +++. .+.+-+|+.++|++
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 47899999999999999999 799999 9999998743 4443 34567888888753
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.19 E-value=9.2e-06 Score=78.95 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=40.8
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
|++.-.+..-+++.++|++++++|++++++|||+...+..+.+++|+.
T Consensus 8 GTLl~~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 8 GTLLPPGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCcCCCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 333334556678999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.6e-06 Score=74.35 Aligned_cols=115 Identities=21% Similarity=0.243 Sum_probs=73.4
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
..++.+++.+.+++|++.|++++++||+....+....+.+|+......++......................+.+..+..
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDK 101 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHH
Confidence 34789999999999999999999999999999999999999854433333222211100000000000111222233444
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCC-eeE
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKAD-IGI 349 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~-vgi 349 (608)
+..+.+.+......+.++||+.+|+.|.+.++ -++
T Consensus 102 ~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 102 LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 44455555444577999999999999999844 444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.1e-05 Score=78.25 Aligned_cols=107 Identities=17% Similarity=0.142 Sum_probs=73.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC----CccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH----GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
+++|++.+.++.|++.|+++.++||.....+..+.+.. +.... ....+++.+....++. ...-+.....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p------~~~~~~~~~~ 146 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP------CDEHCQNHCG 146 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC------ccccccccCC
Confidence 57899999999999999999999999999999999887 64311 0111222211100000 0000000001
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 313 RHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..|..+++.++.....+.++|||.||..|.+.||+.++
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 24788888888777789999999999999999999777
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=76.56 Aligned_cols=104 Identities=14% Similarity=0.144 Sum_probs=76.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc-ccc-chh-hcccCHHHHHHHhhcceEE-EEeC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK-VLS-GDQ-IDQMTEHQLQQVVNSVTVF-YRVT 311 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~-vi~-g~~-~~~~~~~~~~~~~~~~~v~-~r~~ 311 (608)
.++++++.+.++.++++|++++++||.....+..+++.+|+....+. +.. .+. +.. .+. ..+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g-------------~~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTG-------------NIDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeC-------------CccCCCCC
Confidence 46789999999999999999999999999999999999999653211 110 000 000 000 1123
Q ss_pred chhHHHHHHHHH-HCCC---EEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 312 PRHKLTIVKAFQ-ANGV---IVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 312 p~~K~~~v~~l~-~~g~---~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
++.|...++.+. +.+. .+.++||+.+|.+|++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 567887776654 3343 6889999999999999999999987
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=79.32 Aligned_cols=118 Identities=17% Similarity=0.203 Sum_probs=85.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+.....+....+..|+......++.+++..... ..|+--.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~K----------------P~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAK----------------PHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCC----------------CChHHHH
Confidence 467899999999999999999999999999999999999987777777776653322 1133333
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHHHhccCEEEecC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVCKEAADMILVDD 370 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a~~~ad~v~~~~ 370 (608)
.+.+.+.-....++++||+.+|+.+-+.||+ |+..+....+.....+|+++.+.
T Consensus 172 ~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 172 KALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 4444444445679999999999999999995 34333222222344688887643
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=1e-05 Score=78.16 Aligned_cols=125 Identities=24% Similarity=0.322 Sum_probs=85.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.....+..+.+..|+......++++++..... ..|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~K----------------p~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAK----------------PDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCC----------------CCcHHHH
Confidence 367999999999999999999999999999999999999987655555544332111 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcH-HHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTD-VCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~-~a~~~ad~v~~~~~~~~i~~~i 379 (608)
++.+.+......++++||+.+|+.+-++||+ ++..+....+ .....+|+++. ++..+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 3333333334678999999999999999996 4444422222 33446788764 565555544
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.10 E-value=9.3e-06 Score=78.31 Aligned_cols=116 Identities=20% Similarity=0.260 Sum_probs=78.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+...+..+.+..|+......++.+++..... ..|+-=.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------p~p~~~~ 148 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRK----------------PHPDPLL 148 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCC----------------CChHHHH
Confidence 578999999999999999999999999999999999999976554444443322111 1122112
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe---CCC-CcHHHHhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM---GKQ-GTDVCKEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~---~~~-~~~~a~~~ad~v~~ 368 (608)
.+.+.+......++++||+.+|+.+.+.||+.... |.. ........+|+++.
T Consensus 149 ~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~ 204 (213)
T TIGR01449 149 LAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD 204 (213)
T ss_pred HHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC
Confidence 33333333346699999999999999999965432 311 12233346788764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.6e-05 Score=77.71 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=84.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+......++++++.... ...|+--.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~----------------KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAER----------------KPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCC----------------CCCHHHHH
Confidence 46899999999999999999999999998888888889987655444444432211 11232223
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee---EEeCCC-C-cHHHHhccCEEEecCCcchHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG---IAMGKQ-G-TDVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg---ia~~~~-~-~~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.+.+.+.-....++++||+.+|+.+-+.||+. +..|.. . .......+|+++. ++..+.+.
T Consensus 159 ~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~ 223 (229)
T PRK13226 159 VAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNP 223 (229)
T ss_pred HHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHH
Confidence 44444544457799999999999999999954 334421 1 1223456888874 45544443
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=2e-05 Score=79.00 Aligned_cols=126 Identities=19% Similarity=0.324 Sum_probs=82.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.|+++|+++.++||.+...+..+....|+....+.++++++..... ..|+--
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~K----------------p~p~~~ 163 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKK----------------PDPAAL 163 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCC----------------CCcHHH
Confidence 4678999999999999999999999999998888888888866544444443321110 011111
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCC-CcHHHHhccCEEEecCCcchHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQ-GTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~-~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
..+.+.+.-....++++||+.||+.+.+.||+ ++..|.+ ..+..+..+|+++. ++..+.+++
T Consensus 164 ~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 164 LFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 12223222234679999999999999999996 3333322 22334457888874 555555443
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.2e-05 Score=93.46 Aligned_cols=84 Identities=17% Similarity=0.239 Sum_probs=63.8
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF 115 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~ 115 (608)
.+++..+++++. .. .-.|||+|.|++.++.+.+....++++++++++||+|++|+|++++...+ +.+.++
T Consensus 401 ~~ll~~a~l~~~--~~--~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~------~~~~~~ 470 (902)
T PRK10517 401 ERVLHSAWLNSH--YQ--TGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENT------EHHQLI 470 (902)
T ss_pred HHHHHHHHhcCC--cC--CCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECC------CeEEEE
Confidence 456777766432 21 23699999999998876554455677889999999999999999876543 235789
Q ss_pred ccchhh-hhccccce
Q psy16789 116 LHRLLE-VGCVCNNA 129 (608)
Q Consensus 116 ~kg~~e-i~~lc~~a 129 (608)
+||++| ++..|+..
T Consensus 471 ~KGa~e~il~~c~~~ 485 (902)
T PRK10517 471 CKGALEEILNVCSQV 485 (902)
T ss_pred EeCchHHHHHhchhh
Confidence 999999 99999864
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.3e-05 Score=91.12 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=63.6
Q ss_pred HHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc
Q psy16789 37 TLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL 116 (608)
Q Consensus 37 ~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~ 116 (608)
+++..++++ +.. ....|||+|.|++.++.+.+....+.++++++++||++.+|+|++++.+.+| .++.++
T Consensus 400 ~~l~~a~l~-s~~---~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~------~~~~~~ 469 (903)
T PRK15122 400 RVLQLAWLN-SFH---QSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQG------QHLLIC 469 (903)
T ss_pred HHHHHHHHh-CCC---CCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCC------cEEEEE
Confidence 456666553 221 1236999999999999887765455678899999999999999999875433 367899
Q ss_pred cchhh-hhccccce
Q psy16789 117 HRLLE-VGCVCNNA 129 (608)
Q Consensus 117 kg~~e-i~~lc~~a 129 (608)
||++| ++.+|+..
T Consensus 470 KGa~e~il~~c~~~ 483 (903)
T PRK15122 470 KGAVEEMLAVATHV 483 (903)
T ss_pred CCcHHHHHHhchhh
Confidence 99999 99999763
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=9.1e-05 Score=73.06 Aligned_cols=43 Identities=9% Similarity=0.119 Sum_probs=39.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
+...+.+.++|++|+++||.+++.||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4467789999999999999999999999999999999999854
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.1e-05 Score=75.23 Aligned_cols=100 Identities=25% Similarity=0.255 Sum_probs=69.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+++++.+.++.+++.|++++++||.....+..+++.+|+....+..+..++-.... .+..--....+..|..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~--------g~~~~~~~~~~~~K~~ 145 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLT--------GPIEGQVNPEGECKGK 145 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEe--------CccCCcccCCcchHHH
Confidence 57999999999999999999999999999999999999874322211111000000 0000001234578888
Q ss_pred HHHHHHHC----CCEEEEEcCCcCcHHHHHhC
Q psy16789 318 IVKAFQAN----GVIVGMTGDGVNDGVALKKA 345 (608)
Q Consensus 318 ~v~~l~~~----g~~v~~~GDg~ND~~al~~A 345 (608)
.++.+++. ...+.++|||.||.+|++.|
T Consensus 146 ~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 146 VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 88876554 34689999999999999865
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.2e-05 Score=76.32 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=72.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
-++.+++.++++.|+++|+++.++|+........+.+..|+......++++++..... ..|+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------p~~~-- 152 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSK----------------PHPE-- 152 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCC----------------CCHH--
Confidence 3578999999999999999999999999999999999999987666555554332111 1121
Q ss_pred HHHHHHHHHCC---CEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 316 LTIVKAFQANG---VIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 316 ~~~v~~l~~~g---~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
-+.+.+++.| ..++++||+.+|+.+.+.||+....
T Consensus 153 -~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~ 190 (222)
T PRK10826 153 -VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIV 190 (222)
T ss_pred -HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEE
Confidence 2223333333 5699999999999999999976544
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.91 E-value=4e-05 Score=76.09 Aligned_cols=95 Identities=21% Similarity=0.213 Sum_probs=69.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|+++|+++.++|+.....+..+.+..|+.... +.++++++..... ..|+--
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~K----------------P~p~~~ 162 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGR----------------PAPWMA 162 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCC----------------CCHHHH
Confidence 46799999999999999999999999999999999999987653 5555555432211 112222
Q ss_pred HHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCe
Q psy16789 316 LTIVKAFQAN-GVIVGMTGDGVNDGVALKKADI 347 (608)
Q Consensus 316 ~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~v 347 (608)
..+.+.+.-. ...++++||+.+|+.+-+.||+
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHHHHHHHCCC
Confidence 2333333322 3459999999999999999994
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=73.20 Aligned_cols=136 Identities=17% Similarity=0.260 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHcCCC--CCCCccc---cchh-hccc-----------------
Q psy16789 237 PPRPHVRECMSTLLQ-SGVKVKLVTGDGQETATAIASMVGLD--TIHGKVL---SGDQ-IDQM----------------- 292 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~gi~--~~~~~vi---~g~~-~~~~----------------- 292 (608)
.+.+++.++|++|++ .|++++++|||+......+.+.+++. ..++..+ .+.. ...+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 466899999999998 79999999999999998888776642 1111100 0000 0000
Q ss_pred -----------------------CHHHHHHHh---h-c---ce-----EEEEeCc--hhHHHHHHHHHHC-C---CEEEE
Q psy16789 293 -----------------------TEHQLQQVV---N-S---VT-----VFYRVTP--RHKLTIVKAFQAN-G---VIVGM 331 (608)
Q Consensus 293 -----------------------~~~~~~~~~---~-~---~~-----v~~r~~p--~~K~~~v~~l~~~-g---~~v~~ 331 (608)
..+.+..+. . . .. -+..+.| .+|...++.+.+. | ..+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 011111111 0 0 11 1122233 3788777766544 3 56899
Q ss_pred EcCCcCcHHHHHhC----CeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 332 TGDGVNDGVALKKA----DIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 332 ~GDg~ND~~al~~A----~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
+||+.||.+|++.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999998 664 34677665 444555444
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=6e-05 Score=74.87 Aligned_cols=116 Identities=13% Similarity=0.129 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+......++++++..... ..|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~K----------------P~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGK----------------PDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCC----------------CCHHHHH
Confidence 467999999999999999999999999999999999999987777777776553211 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE-EeCCCCcHHHHhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGI-AMGKQGTDVCKEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi-a~~~~~~~~a~~~ad~v~~ 368 (608)
.+.+.+.-....++++||+.+|+.+-+.||+-. ++.+.........+|+++.
T Consensus 173 ~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~ 225 (260)
T PLN03243 173 YAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR 225 (260)
T ss_pred HHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC
Confidence 334444434566999999999999999999633 3322222322335677754
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=9.4e-05 Score=74.03 Aligned_cols=122 Identities=16% Similarity=0.216 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+...+..+.+..|+......++++++... .|+.-.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~~-------------------k~~~~~ 202 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPILS-------------------KRRALS 202 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCCC-------------------CHHHHH
Confidence 4679999999999999999999999999999999999999765544444332110 011111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee---EEeCCCCcH-HHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG---IAMGKQGTD-VCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg---ia~~~~~~~-~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+++.+.-....++++||+.+|+.+-+.||+- +..+.+..+ .....+|+++. ++..+...+
T Consensus 203 ~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 203 QLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 22222222345699999999999999999954 333422222 23446888874 566665544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00018 Score=78.86 Aligned_cols=40 Identities=5% Similarity=0.118 Sum_probs=36.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
.-+.+.++|++++++|++++++|||.......+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4567899999999999999999999999999999999974
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.4e-05 Score=87.40 Aligned_cols=79 Identities=16% Similarity=0.222 Sum_probs=60.3
Q ss_pred HHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc
Q psy16789 37 TLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL 116 (608)
Q Consensus 37 ~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~ 116 (608)
+++..+++||+ ...|||+|.|++..+.+.+ ..+..++++++.||++.+|+|++.+.+.+ ++..+.++
T Consensus 318 ~~l~~a~~~~~------~~~~~pi~~Ai~~~~~~~~--~~~~~~~~~~~~pf~~~~k~~~~~v~~~~-----~g~~~~~~ 384 (755)
T TIGR01647 318 DVLLYAALASR------EEDQDAIDTAVLGSAKDLK--EARDGYKVLEFVPFDPVDKRTEATVEDPE-----TGKRFKVT 384 (755)
T ss_pred HHHHHHHHhCC------CCCCChHHHHHHHHHHHhH--HHHhcCceEEEeccCCCCCeEEEEEEeCC-----CceEEEEE
Confidence 56777777764 1348999999999887643 34556788899999999999999886542 12356789
Q ss_pred cchhh-hhccccc
Q psy16789 117 HRLLE-VGCVCNN 128 (608)
Q Consensus 117 kg~~e-i~~lc~~ 128 (608)
||++| ++..|+.
T Consensus 385 kGa~e~il~~c~~ 397 (755)
T TIGR01647 385 KGAPQVILDLCDN 397 (755)
T ss_pred eCChHHHHHhcCC
Confidence 99999 8899975
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00015 Score=84.32 Aligned_cols=84 Identities=13% Similarity=0.182 Sum_probs=62.5
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF 115 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~ 115 (608)
.+++..+++++.. + ...+||+|.|++.++.+......+.++++++++||+|++|+|++++.+.+ +.+..+
T Consensus 366 ~~~l~~a~l~~~~--~--~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~------~~~~~~ 435 (867)
T TIGR01524 366 ERVLKMAWLNSYF--Q--TGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRA------EVTRLI 435 (867)
T ss_pred HHHHHHHHHhCCC--C--CCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCC------ceEEEE
Confidence 3466666654332 1 23579999999998876544455667889999999999999999886543 235789
Q ss_pred ccchhh-hhccccce
Q psy16789 116 LHRLLE-VGCVCNNA 129 (608)
Q Consensus 116 ~kg~~e-i~~lc~~a 129 (608)
+||++| ++.+|+..
T Consensus 436 ~KGa~e~il~~c~~~ 450 (867)
T TIGR01524 436 CKGAVEEMLTVCTHK 450 (867)
T ss_pred EeCcHHHHHHhchhh
Confidence 999999 88999753
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00015 Score=71.48 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHH-----HHhcc---C-EEEecCCcchHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDV-----CKEAA---D-MILVDDDFNTIIAAI 379 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~-----a~~~a---d-~v~~~~~~~~i~~~i 379 (608)
..|...++.+++. + ..|+++||+.||.+||..++.||.++ |+.+. ..... . |....+.-.||++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 3799999988865 2 35788999999999999999999999 77777 22222 2 445555666777766
Q ss_pred HH
Q psy16789 380 EE 381 (608)
Q Consensus 380 ~~ 381 (608)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=71.38 Aligned_cols=52 Identities=19% Similarity=0.233 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHCCCEEEEEcC----CcCcHHHHHhC-CeeEEeCCCCcHHHHhccCEE
Q psy16789 314 HKLTIVKAFQANGVIVGMTGD----GVNDGVALKKA-DIGIAMGKQGTDVCKEAADMI 366 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GD----g~ND~~al~~A-~vgia~~~~~~~~a~~~ad~v 366 (608)
+|...++.+.+....|+++|| |.||.+||+.| -.|+++. |+.+.+|..+.++
T Consensus 188 sKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 188 DKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred cHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 688888887777778999999 99999999976 4677777 8888888776543
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.76 E-value=9.5e-05 Score=71.71 Aligned_cols=98 Identities=24% Similarity=0.244 Sum_probs=72.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC--CCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD--TIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
.++.+++.+.++.|+++|+++.++|+........+.+..|+. .....++++++..... ..|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~K----------------P~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGR----------------PAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCC----------------CCHH
Confidence 368899999999999999999999999999999999999987 5555555554432111 1122
Q ss_pred hHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 314 HKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 314 ~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
-=..+.+.+.-. ...++++||+.+|+.+-+.||+..
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 111222333222 357999999999999999999886
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00019 Score=69.45 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=75.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.+.++.|+++|+++.++|+.+...+...-+..|+.. ...++++++..... ..|+--.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~~~~K----------------P~p~~~~ 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERVKRGK----------------PEPDAYL 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHhcCCC----------------CCcHHHH
Confidence 467999999999999999999999988777776667777743 33444444332111 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCcHHHHhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGTDVCKEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~~~a~~~ad~v~~ 368 (608)
.+.+.+.-....++++||+.+|+.+-+.||+. |++...........+|+++.
T Consensus 146 ~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 146 LGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 33333433457799999999999999999974 44542222222345677654
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00016 Score=70.38 Aligned_cols=93 Identities=23% Similarity=0.249 Sum_probs=67.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD----GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
.+.+.+.+.++.++++|+++.++|++ ...++..+.+.+|+......++.++....- .|
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~------------------Kp 175 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQY------------------QY 175 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCC------------------CC
Confidence 35566999999999999999999999 777999999999997654444444432210 01
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeC
Q psy16789 313 RHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMG 352 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~ 352 (608)
+|. ..+++.+ .++|+||+.||..+-+.|++ ++..+
T Consensus 176 -~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 176 -TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 122 2345545 37899999999999999994 44444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00018 Score=72.07 Aligned_cols=100 Identities=18% Similarity=0.208 Sum_probs=68.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|+++|+++.++||.....+..+.+..|+.... ..++++++..... ..|+-=
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~K----------------P~p~~~ 164 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGR----------------PYPWMA 164 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCC----------------CChHHH
Confidence 46799999999999999999999999999888888877775532 3444443322111 112221
Q ss_pred HHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCe---eEEeC
Q psy16789 316 LTIVKAFQAN-GVIVGMTGDGVNDGVALKKADI---GIAMG 352 (608)
Q Consensus 316 ~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~v---gia~~ 352 (608)
..+.+.+.-. ...++|+||+.+|+.+-+.||+ |+..+
T Consensus 165 ~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 165 LKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 2223333322 2568999999999999999995 55444
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00013 Score=69.47 Aligned_cols=93 Identities=19% Similarity=0.246 Sum_probs=69.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
+++.+...++++.|+++|+++.++||.+...+..+.+..|+......++++++... ...|+.-
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-----------------KP~p~~~ 167 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-----------------KPNPEPL 167 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-----------------CcCHHHH
Confidence 44666779999999999999999999999999999999999876655555544321 1223333
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhC
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKA 345 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A 345 (608)
..+.+.+.-....++++||+.+|+.+-+.|
T Consensus 168 ~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 168 ILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 344455544556799999999999987754
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0003 Score=67.52 Aligned_cols=106 Identities=16% Similarity=0.091 Sum_probs=75.2
Q ss_pred CCChhHHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMS-TLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~-~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.+.|++.++|+ .++++|++++++|+.....+..+++..++.... .++ +.+++..+. .. ..-..+..++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i-~t~le~~~g-------g~-~~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLI-ASQIERGNG-------GW-VLPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEE-EEEeEEeCC-------ce-EcCccCCChHH
Confidence 46899999995 788899999999999999999999986664322 233 333332110 00 01123567788
Q ss_pred HHHHHHHH-HCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 316 LTIVKAFQ-ANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 316 ~~~v~~l~-~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
..-++..- .......+-||+.||.||++.||.++++.
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 87666443 22334567899999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00039 Score=66.95 Aligned_cols=106 Identities=16% Similarity=0.086 Sum_probs=74.9
Q ss_pred CCChhHHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECM-STLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.+.+++.+.| +.+++.|++++++|+.....+..+++.+|+... ..++ +.+++.. ...-..-..+..+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~-~~~i-~t~l~~~--------~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR-VNLI-ASQMQRR--------YGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc-CceE-EEEEEEE--------EccEECCccCCChHH
Confidence 3479999999 578889999999999999999999999996321 1233 3333220 000001123566788
Q ss_pred HHHHHHH-HHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 316 LTIVKAF-QANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 316 ~~~v~~l-~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
...++.. ........+-||+.||.||++.|+.+++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 8766644 323344567899999999999999999996
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00026 Score=68.60 Aligned_cols=100 Identities=16% Similarity=0.201 Sum_probs=70.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+.+........+.+|+......++.+++..... ..|+-=.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~K----------------P~~~~~~ 157 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEK----------------PHPKIFY 157 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCC----------------CCHHHHH
Confidence 467999999999999999999999999888888889999976655555554432111 1122111
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee-EEeC
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG-IAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg-ia~~ 352 (608)
.+.+.+.-....++++||+. +|+.+-+.||+- |.+.
T Consensus 158 ~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 158 AALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22333332346799999998 899999999963 4443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00031 Score=66.84 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+-+........+..|+....+.+++.++..... ..|+-=.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~K----------------P~~~~~~ 155 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYK----------------PAPQVYQ 155 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCC----------------CCHHHHH
Confidence 467999999999999999999999999999999999999876555555554432211 1111112
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
.+.+.+.-....++++||+.+|+.+-+.+|+-..
T Consensus 156 ~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 156 LALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 3333343345679999999999999999997543
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00045 Score=71.62 Aligned_cols=116 Identities=12% Similarity=0.131 Sum_probs=82.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.....+..+-+..|+....+.++.+++..... ..|+-=.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~K----------------P~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGK----------------PDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCC----------------CCHHHHH
Confidence 467999999999999999999999999999999999999987766666666543211 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHH-HhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVC-KEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a-~~~ad~v~~ 368 (608)
.+.+.+.-....++|+||+.+|+.|-+.|++-...-..+.+.. ...+|+++.
T Consensus 280 ~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 280 YAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR 332 (381)
T ss_pred HHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC
Confidence 3444444456779999999999999999996433211222121 234777764
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0016 Score=74.69 Aligned_cols=165 Identities=15% Similarity=0.205 Sum_probs=97.6
Q ss_pred hhHHHhhccCceEEEEEccCCCCceEEEEee--ecCCCChhHHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHcCC--C
Q psy16789 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVG--ICDPPRPHVRECMSTLLQ-SGVKVKLVTGDGQETATAIASMVGL--D 277 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~--~~d~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~gi--~ 277 (608)
....|.....|.+.+-+.. +++.... -...+.+++.+++++|.+ .|+.|+++|||+...........++ .
T Consensus 483 ~~~~y~~~~~rLi~~D~DG-----TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~li 557 (726)
T PRK14501 483 IIARYRAASRRLLLLDYDG-----TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLV 557 (726)
T ss_pred HHHHHHhccceEEEEecCc-----cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEE
Confidence 4455555556777765542 2221110 012367899999999999 5999999999999988887665553 1
Q ss_pred CCCCcccc--chhhc-----------------------------------------ccCH-------HHHHHHh----hc
Q psy16789 278 TIHGKVLS--GDQID-----------------------------------------QMTE-------HQLQQVV----NS 303 (608)
Q Consensus 278 ~~~~~vi~--g~~~~-----------------------------------------~~~~-------~~~~~~~----~~ 303 (608)
..++..+. +..+. ..++ +++.+.+ ..
T Consensus 558 aenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~ 637 (726)
T PRK14501 558 AEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSN 637 (726)
T ss_pred EeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 11111110 00000 0000 0111111 11
Q ss_pred --ceE-------EEEeCchhHHHHHHHHHHC--CCEEEEEcCCcCcHHHHHhC---CeeEEeCCCCcHHHHhccCEEEec
Q psy16789 304 --VTV-------FYRVTPRHKLTIVKAFQAN--GVIVGMTGDGVNDGVALKKA---DIGIAMGKQGTDVCKEAADMILVD 369 (608)
Q Consensus 304 --~~v-------~~r~~p~~K~~~v~~l~~~--g~~v~~~GDg~ND~~al~~A---~vgia~~~~~~~~a~~~ad~v~~~ 369 (608)
+.+ -.+....+|...++.+.+. ...++++||+.||.+|++.+ +.+++|| ++ +.+|++.+.+
T Consensus 638 ~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~ 712 (726)
T PRK14501 638 APLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPS 712 (726)
T ss_pred CCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCC
Confidence 111 1122234799888888764 35799999999999999986 6888888 53 4578888874
Q ss_pred CCcchHHHHH
Q psy16789 370 DDFNTIIAAI 379 (608)
Q Consensus 370 ~~~~~i~~~i 379 (608)
. +.+...+
T Consensus 713 ~--~eV~~~L 720 (726)
T PRK14501 713 Q--REVRELL 720 (726)
T ss_pred H--HHHHHHH
Confidence 3 4455554
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00071 Score=73.29 Aligned_cols=121 Identities=17% Similarity=0.190 Sum_probs=83.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++++++.... ..|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~-----------------~kP~~-- 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSL-----------------NKSDL-- 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCC-----------------CCcHH--
Confidence 57899999999999999999999999999999999999998766666665543210 11221
Q ss_pred HHHHHHHH-CCCEEEEEcCCcCcHHHHHhCCee-EEeCC-CCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQA-NGVIVGMTGDGVNDGVALKKADIG-IAMGK-QGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~-~g~~v~~~GDg~ND~~al~~A~vg-ia~~~-~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
+...+++ ....+.++||+.+|+.+-+.||+- |++.. ...+.....+|+++. ++..+.+.+
T Consensus 391 -~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 391 -VKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred -HHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 1122222 235699999999999999999963 33321 222222345788764 555555544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00085 Score=64.17 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=35.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVG 275 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g 275 (608)
++.+++.+++++|++.|++++++|||.......+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00029 Score=68.55 Aligned_cols=96 Identities=17% Similarity=0.051 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+...+....+..|+......++.+++.....+ .|+-=.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP----------------~p~~~~ 156 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKE----------------DQRLWQ 156 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCC----------------CHHHHH
Confidence 5679999999999999999999999988888888888888765555555444322110 111111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
.+.+.+.-....++++||+.+|+.+-+.||+.
T Consensus 157 ~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 157 AVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred HHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 22222322345699999999999999999996
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00054 Score=66.62 Aligned_cols=86 Identities=19% Similarity=0.296 Sum_probs=63.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHcCC--CCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDG----QETATAIASMVGL--DTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~ta~~ia~~~gi--~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
.+.+++.+.++.+++.|+++.++|||. ..++..+.+..|+ ......++.++..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 467889999999999999999999974 6688999999999 4433333333321
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI 347 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v 347 (608)
.-.+|.. .+++.+. ++++||..+|..+-+.||+
T Consensus 173 ~K~~K~~---~l~~~~i-~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 173 GQYTKTQ---WLKKKNI-RIFYGDSDNDITAAREAGA 205 (237)
T ss_pred CCCCHHH---HHHhcCC-eEEEcCCHHHHHHHHHcCC
Confidence 0123433 4444444 7889999999999999995
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00046 Score=72.61 Aligned_cols=97 Identities=18% Similarity=0.215 Sum_probs=70.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH-HcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS-MVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~-~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|+++|+++.++|+.....+....+ ..|+....+.++++++..... ..|+-=
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~K----------------P~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGK----------------PSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCC----------------CCHHHH
Confidence 467999999999999999999999999888877665 678876666666655542211 112222
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
..+.+.+.-....++++||+.+|+.+-+.||+..
T Consensus 157 ~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 157 LEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred HHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 2334444434567999999999999999999653
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00054 Score=69.91 Aligned_cols=108 Identities=12% Similarity=0.005 Sum_probs=74.9
Q ss_pred ecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC-CCCccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 234 ICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT-IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 234 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
..+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. ....+...+... ..+.... -.+..|
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~--------~~~~~~~-~~kp~p 254 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDM--------HFQREQG-DKRPDD 254 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchh--------hhcccCC-CCCCcH
Confidence 467899999999999999999999999999999999999999875 333332222100 0000000 012334
Q ss_pred hhHHHHHHHHHH-CCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 313 RHKLTIVKAFQA-NGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 313 ~~K~~~v~~l~~-~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
+-+...++.+.. ....++|+||..+|+.+-+.||+...
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 455555555433 34779999999999999999997543
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0033 Score=62.20 Aligned_cols=137 Identities=14% Similarity=0.109 Sum_probs=83.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
-++++++.+.++.|+++|+++.++||-....+..+.++.|+...+..++ ...+....+.. .... ----+....|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~Iv-SN~L~f~~dGv----ltG~-~~P~i~~~~K 193 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVV-SNFMDFDEDGV----LKGF-KGPLIHTFNK 193 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEE-eeeEEECCCCe----EeCC-CCCccccccc
Confidence 3478999999999999999999999999999999999999865442221 11111000000 0000 0000112345
Q ss_pred HHHHHH-----HH--HCCCEEEEEcCCcCcHHHHHhCC-----eeEEeCCCCc-----HHHHhccCEEEecCCcchHHHH
Q psy16789 316 LTIVKA-----FQ--ANGVIVGMTGDGVNDGVALKKAD-----IGIAMGKQGT-----DVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 316 ~~~v~~-----l~--~~g~~v~~~GDg~ND~~al~~A~-----vgia~~~~~~-----~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.+.+.. ++ .....+.++|||.||++|..-.. +.|+.- |.. +.-.++=|+|+.++.=-.++..
T Consensus 194 ~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfl-n~~~e~~l~~y~~~~Divl~~D~t~~v~~~ 272 (277)
T TIGR01544 194 NHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYL-NDRVDELLEKYMDSYDIVLVQDETLEVANS 272 (277)
T ss_pred HHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEec-ccCHHHHHHHHHHhCCEEEECCCCchHHHH
Confidence 554432 22 22367999999999999976541 233322 222 2345678999988765555554
Q ss_pred H
Q psy16789 379 I 379 (608)
Q Consensus 379 i 379 (608)
|
T Consensus 273 i 273 (277)
T TIGR01544 273 I 273 (277)
T ss_pred H
Confidence 4
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00031 Score=64.85 Aligned_cols=98 Identities=22% Similarity=0.325 Sum_probs=73.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.|++.|++++++|+.+........+..|+......++..++.....+ .|+-=
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp----------------~~~~~ 139 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKP----------------DPDAY 139 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTT----------------SHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhh----------------HHHHH
Confidence 35689999999999999999999999999999999999999865556665554432111 01112
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
..+.+.+.-....++++||+..|+.+-+.||+.-
T Consensus 140 ~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 140 RRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 2344444444567999999999999999999643
|
... |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00091 Score=65.00 Aligned_cols=124 Identities=16% Similarity=0.136 Sum_probs=78.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+ +|+++.++|+.....+...-+..|+....+.++.+++..... ..|+-=.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~K----------------P~p~~~~ 157 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAK----------------PDVAIFD 157 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCC----------------CCHHHHH
Confidence 36799999999999 689999999999888888888899876555555544432111 1111111
Q ss_pred HHHHHHHHC-CCEEEEEcCCc-CcHHHHHhCCee-EEeCCCCcH-HHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQAN-GVIVGMTGDGV-NDGVALKKADIG-IAMGKQGTD-VCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~-g~~v~~~GDg~-ND~~al~~A~vg-ia~~~~~~~-~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+++.+.-. ...+.++||+. +|+.+-+.||+- |.+...+.. .....+|+++. ++..+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 158 YALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 233333221 25699999998 699999999975 333311211 11124677663 455555433
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00034 Score=65.70 Aligned_cols=94 Identities=15% Similarity=0.170 Sum_probs=64.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.++++.|+++|+++.++|+... +....+..|+......++++++..... ..|+-=.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~k----------------p~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGK----------------PDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCC----------------CChHHHH
Confidence 5679999999999999999999997643 356778888876655555555432211 1121111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
.+.+.+.-....+.++||+.+|+.+-+.||+-
T Consensus 149 ~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 149 AAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22222222235699999999999999999974
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0016 Score=59.40 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=65.9
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHc---CCCCCCCcccc-chhhc-ccCHHHHHHHhhcceE
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT---AIASMV---GLDTIHGKVLS-GDQID-QMTEHQLQQVVNSVTV 306 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~~---gi~~~~~~vi~-g~~~~-~~~~~~~~~~~~~~~v 306 (608)
+|...+++.+++++++++|++++++|||+...+. ....++ |..-+.+.++. ...+. .... .+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~----------e~ 94 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHR----------EV 94 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhc----------cc
Confidence 4678899999999999999999999999988874 555552 32111122221 11111 0000 11
Q ss_pred EEEeCchhHHHHHHHHHH-----CCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 307 FYRVTPRHKLTIVKAFQA-----NGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~-----~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
..+.+-+.|.+.++.+++ ....++.+||+.+|+.+.+++++.
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 122222347777776665 245667799999999999988764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00075 Score=63.11 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=66.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+..... ..+..++|+......++.+++..... ..|+--.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~K----------------P~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGK----------------PDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCC----------------CCHHHHH
Confidence 567999999999999999999999988877 55655688876555555443322111 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
.+.+.+......+.++||+..|+.+-+.+|+-
T Consensus 148 ~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 33333333457799999999999999999863
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0012 Score=66.80 Aligned_cols=116 Identities=20% Similarity=0.219 Sum_probs=71.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
++.|++.+.++.|++.|+++.++|+.+......+-+..+...... .++.+++.... ...|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~----------------KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKK----------------KPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCC----------------CCCHHH
Confidence 467999999999999999999999998888877766553221111 12222222110 111222
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCC--cHHHHhccCEEEe
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQG--TDVCKEAADMILV 368 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~--~~~a~~~ad~v~~ 368 (608)
=..+.+.+.-....++++||+.+|+.+-+.||+....-..+ .......+|+++.
T Consensus 208 ~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 208 YNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 22333444334567999999999999999999654432122 1111235787764
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00066 Score=63.71 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=64.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+. ..+..+.+..|+......++.+++... ..|. .
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~------------------~kp~--~ 145 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE------------------GKPH--P 145 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC------------------CCCC--h
Confidence 57899999999999999999999987 557778888888765444544433221 1122 1
Q ss_pred HHH-HHHHHC---CCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 317 TIV-KAFQAN---GVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 317 ~~v-~~l~~~---g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
+++ +.+++. ...++++||+.+|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 222 223333 356889999999999999998753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00099 Score=64.60 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=68.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++. +++.++|+........+.+..|+....+.++.+.+..... ..|+-=.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~K----------------P~~~~~~ 159 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQK----------------PDKEIFN 159 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCC----------------CCHHHHH
Confidence 4679999999999999 9999999999999999999999977655555544432111 1111112
Q ss_pred HHHHHH-HHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 317 TIVKAF-QANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l-~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
.+.+.+ .-....++++||+. +|+.+-+.+|+.
T Consensus 160 ~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 160 YALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred HHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 333333 22345699999998 899999999963
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0019 Score=59.64 Aligned_cols=99 Identities=12% Similarity=0.062 Sum_probs=70.1
Q ss_pred EeeecCCCChhHHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHcCCC---------CCCCccccchhhcccCHHHHHHH
Q psy16789 231 LVGICDPPRPHVRECMSTLLQSGVKVKLVTGD-GQETATAIASMVGLD---------TIHGKVLSGDQIDQMTEHQLQQV 300 (608)
Q Consensus 231 ~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~ta~~ia~~~gi~---------~~~~~vi~g~~~~~~~~~~~~~~ 300 (608)
..+-+-++.+++.+.++.|+++|+++.++|+. ....+..+...+|+. .....++.+++
T Consensus 39 ~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~------------ 106 (174)
T TIGR01685 39 KSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYK------------ 106 (174)
T ss_pred CCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccC------------
Confidence 33344457899999999999999999999987 888999999999986 32222222221
Q ss_pred hhcceEEEEeCchhH--HHHHHHHHHC------CCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 301 VNSVTVFYRVTPRHK--LTIVKAFQAN------GVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 301 ~~~~~v~~r~~p~~K--~~~v~~l~~~------g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
.+..| ..+.+.+.+. ...++++||+..|+.+-++|++-...
T Consensus 107 ----------~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 107 ----------PNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ----------CchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 11112 2344444432 35799999999999999999976554
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0011 Score=61.53 Aligned_cols=97 Identities=16% Similarity=0.091 Sum_probs=57.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHH--------HHHHHHHHcCCCCCCCccc-cchhhcccCHHHHHHHhhcceEEE
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQE--------TATAIASMVGLDTIHGKVL-SGDQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~--------ta~~ia~~~gi~~~~~~vi-~g~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
+.+++.+++++|++.|+++.++|+.... ......+..|+........ .+++... .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~----------------~ 92 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC----------------R 92 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC----------------C
Confidence 6799999999999999999999987631 1223344455543110000 0111000 0
Q ss_pred EeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 309 RVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 309 r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
...|+-=..+.+.+......+.++||+.+|+.+-+.|++-..
T Consensus 93 KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 93 KPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 111221123333333334679999999999999999995433
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0013 Score=63.74 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=61.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHH-HHHHcCCCCCCCccccch--hhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATA-IASMVGLDTIHGKVLSGD--QIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~-ia~~~gi~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
++.+++.+.|+.|+++|+++.++||........ ..+..++......+++++ +..... ..|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~K----------------P~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGK----------------PAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCC----------------CCcH
Confidence 467999999999999999999999987654432 222234443333444444 221100 1122
Q ss_pred hHHHHHHHHH---HCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 314 HKLTIVKAFQ---ANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 314 ~K~~~v~~l~---~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
-=..+++.+. -....+.++||+..|+.+-+.||+..
T Consensus 142 ~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 142 IFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 2223334342 22467999999999999999999643
|
|
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.00054 Score=76.34 Aligned_cols=93 Identities=18% Similarity=0.344 Sum_probs=68.1
Q ss_pred HHHHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhc--------------C-c-----h------hh-h----hhccc
Q psy16789 34 ETGTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF--------------G-L-----Y------AV-N----EHYVR 82 (608)
Q Consensus 34 ~~~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~--------------g-~-----~------~~-~----~~~~~ 82 (608)
+...++.+.+.|++-....++.+|||.|.-+.+..... + . + +. . ..+..
T Consensus 524 ~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si 603 (1140)
T KOG0208|consen 524 PMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISI 603 (1140)
T ss_pred chHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEE
Confidence 35678888999998777788899999986554432211 0 0 0 00 0 14568
Q ss_pred ccccccccccccceeeecCCCCCccccceEEEEccchhh-hhccccceee
Q psy16789 83 LKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASI 131 (608)
Q Consensus 83 v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~ 131 (608)
++.+||+|..++|+|++.+.+ +....+|+||+|| +..+|+.-+.
T Consensus 604 ~k~feF~S~LrRMSVIv~~~~-----e~~~~~ftKGaPE~I~~ic~p~tv 648 (1140)
T KOG0208|consen 604 VKQFEFSSALRRMSVIVSTGG-----EDKMMVFTKGAPESIAEICKPETV 648 (1140)
T ss_pred EEecccchhhheEEEEEecCC-----CCceEeeccCCHHHHHHhcCcccC
Confidence 899999999999999998765 3446789999999 9999998444
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0037 Score=58.58 Aligned_cols=93 Identities=22% Similarity=0.194 Sum_probs=56.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHcCCCCCCCccccch-----hhcccCHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQ---------------ETATAIASMVGLDTIHGKVLSGD-----QIDQMTEHQL 297 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~vi~g~-----~~~~~~~~~~ 297 (608)
+.+++.+.+++|+++|+++.++|+.+. .....+.+..|+. ...++... +...
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i~~~~~~~~~~~~~------ 101 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGIYYCPHHPEDGCDC------ 101 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcC------
Confidence 579999999999999999999998762 1112233344542 11111110 0000
Q ss_pred HHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
....|+--..+.+.+.-....++|+||+.+|+.+-+.||+.
T Consensus 102 ----------~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 102 ----------RKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred ----------CCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 01112222233333433457799999999999999999964
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0017 Score=62.02 Aligned_cols=95 Identities=13% Similarity=0.123 Sum_probs=63.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+-... .....+.+|+......++..++..... ..|+-=.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~K----------------P~~~~~~ 167 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEK----------------PDPKIFQ 167 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCC----------------CCHHHHH
Confidence 46799999999999999999999987654 466777888865544444433322111 1111111
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
.+.+.+.-....++++||+. +|+.+-+.||+-
T Consensus 168 ~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 168 EALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22233332346799999997 899999988864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0026 Score=56.13 Aligned_cols=94 Identities=20% Similarity=0.217 Sum_probs=64.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEE
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDG--------QETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVF 307 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 307 (608)
.++.+++.++++.|+++|+++.++|+.. ......+.+.+|+.... ....+ ..
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~-~~------------------ 83 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-LYACP-HC------------------ 83 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-EEECC-CC------------------
Confidence 3577999999999999999999999998 77788888888885321 11111 00
Q ss_pred EEeCchhHHHHHHHHH-HCCCEEEEEcC-CcCcHHHHHhCCeeE
Q psy16789 308 YRVTPRHKLTIVKAFQ-ANGVIVGMTGD-GVNDGVALKKADIGI 349 (608)
Q Consensus 308 ~r~~p~~K~~~v~~l~-~~g~~v~~~GD-g~ND~~al~~A~vgi 349 (608)
....|+-=..+.+.++ -....++|+|| ..+|+.+-+.+|+-.
T Consensus 84 ~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 84 RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 0111222223334442 33467999999 699999999998643
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0039 Score=74.06 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=88.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC-CCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD-TIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~-~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
+.+++.+.++.|+++|+++.++|+.....+....+..|+. ...+.++.+++..... ..|+-=.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~K----------------P~Pe~~~ 225 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLK----------------PAPDIFL 225 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCC----------------CCHHHHH
Confidence 5799999999999999999999999999999999999986 4345555555443211 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKG 384 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~ 384 (608)
.+.+.+.-....+.++||..+|+.+-+.|++ ++.-+....+.....+|+++.+-..-.+..++..|-.
T Consensus 226 ~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~ 296 (1057)
T PLN02919 226 AAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSD 296 (1057)
T ss_pred HHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCC
Confidence 3344444445679999999999999999996 3332322233344567888876544455555544433
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0014 Score=59.16 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=72.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcC----CCCC----CCccccchhhcccCHHHHHHHhhcceEE-
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVG----LDTI----HGKVLSGDQIDQMTEHQLQQVVNSVTVF- 307 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g----i~~~----~~~vi~g~~~~~~~~~~~~~~~~~~~v~- 307 (608)
.++|+.++.++.+++.+++++++|+........+-+.++ +... ++..+..+..-. .++
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~-------------i~~~ 139 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHS-------------IKYT 139 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCcee-------------eecC
Confidence 368999999999999999999999888777777777665 2110 000110000000 000
Q ss_pred -EEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 308 -YRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 308 -~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
...-..+|...|+.+++..+.+.++|||+.|.+|-+.+|+-+|=
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 01224589999999999999999999999999999999988874
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0032 Score=57.11 Aligned_cols=91 Identities=15% Similarity=0.212 Sum_probs=58.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
+..+++.+.++.|+++|+++.++|+.....+....+.. +......++..++.. ....|+-=.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-----------------~Kp~~~~~~ 125 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-----------------AKPEPEIFL 125 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-----------------CCcCHHHHH
Confidence 34578999999999999999999999998888877765 433332332222111 001111111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~ 346 (608)
.+.+.+.-.. .++++||+.+|+.+-+.|+
T Consensus 126 ~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2222222224 7899999999999988775
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.005 Score=54.04 Aligned_cols=88 Identities=11% Similarity=0.132 Sum_probs=58.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHcC-------CCCCCCccccchhhcccCHHHHHHHhhcceEEE
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD-GQETATAIASMVG-------LDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~ta~~ia~~~g-------i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+ +......++.+++.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~------------------- 89 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL------------------- 89 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCC-------------------
Confidence 67899999999999999999999999 7877777777666 22211112211110
Q ss_pred EeCchhHHHHHHHHH--HCCCEEEEEcCCcCcHHHHHh
Q psy16789 309 RVTPRHKLTIVKAFQ--ANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 309 r~~p~~K~~~v~~l~--~~g~~v~~~GDg~ND~~al~~ 344 (608)
..|+.=..+.+.+. -....++|+||...|...+++
T Consensus 90 -pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 90 -PKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -cHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 01222223344444 345789999999999887764
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0076 Score=56.22 Aligned_cols=140 Identities=21% Similarity=0.279 Sum_probs=85.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhc-----------------ccCHHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQID-----------------QMTEHQLQ 298 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~-----------------~~~~~~~~ 298 (608)
+-|++.++++.+++.=-.++ +|-.-.+.+..+|+.+|+...+- .-++-++.. .++.+++.
T Consensus 84 lvPgA~etm~~l~~~~tp~v-~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQERWTPVV-ISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhccCCceE-EeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 46899999998887655554 45556677889999999954321 111111100 01111111
Q ss_pred HHhhcceEEEEeCchh---------------HHHHHHHHHHC---CCEEEEEcCCcCcHHHHHhCC-e-eEEeCCCCcHH
Q psy16789 299 QVVNSVTVFYRVTPRH---------------KLTIVKAFQAN---GVIVGMTGDGVNDGVALKKAD-I-GIAMGKQGTDV 358 (608)
Q Consensus 299 ~~~~~~~v~~r~~p~~---------------K~~~v~~l~~~---g~~v~~~GDg~ND~~al~~A~-v-gia~~~~~~~~ 358 (608)
+.+. .+|.|..|.. |..+++.+-+. ....+++||++.|+.|++.+. - |+|+.-||.+-
T Consensus 163 e~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 163 EKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 1111 1455555543 44444443332 233577999999999999875 2 36666678888
Q ss_pred HHhccCEEEecCCcchHHHHHH
Q psy16789 359 CKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 359 a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
+-..||+.+.+.+...+..+|+
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 8899999888888777776663
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0088 Score=58.96 Aligned_cols=65 Identities=22% Similarity=0.230 Sum_probs=45.3
Q ss_pred eCchhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhC--------CeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 310 VTPRHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKA--------DIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 310 ~~p~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A--------~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
..+.+|...++.+.+. ...++++||+.||.+|++.+ +.+++++ .+ ..+..|++++. +...+.+
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHHHH
Confidence 3445788777766544 34699999999999999998 4788885 23 23456888875 4444555
Q ss_pred HH
Q psy16789 378 AI 379 (608)
Q Consensus 378 ~i 379 (608)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.012 Score=54.90 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
+.+.+.+.+|+++|++|+.+|.........+-+++|+.
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 34567899999999999999999999999999999986
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.004 Score=56.97 Aligned_cols=92 Identities=20% Similarity=0.180 Sum_probs=60.6
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHcCCCCCCCccccc-----hhhcccCHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGD---------------GQETATAIASMVGLDTIHGKVLSG-----DQIDQMTEHQL 297 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~vi~g-----~~~~~~~~~~~ 297 (608)
+-+++.++++.|+++|+++.++|.. .......+.+..|+. ...++.+ ++...
T Consensus 30 ~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~------ 101 (161)
T TIGR01261 30 FEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC------ 101 (161)
T ss_pred ECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC------
Confidence 5689999999999999999999985 244566777777875 2112211 11110
Q ss_pred HHHhhcceEEEEeCchhHHHHHHHH-HHC---CCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVKAF-QAN---GVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~~l-~~~---g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
..-+..+++.+ ++. ...+.|+||+.+|+.+-+.+++....
T Consensus 102 --------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 102 --------------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred --------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 11222333333 222 35699999999999999999975543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0057 Score=59.17 Aligned_cols=103 Identities=20% Similarity=0.217 Sum_probs=69.3
Q ss_pred CCChhHHHHHHHH--HhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHH-hhcceEEEEeCc-
Q psy16789 237 PPRPHVRECMSTL--LQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQV-VNSVTVFYRVTP- 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l--~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~-~~~~~v~~r~~p- 312 (608)
|+.++.++.++.+ ++.|+.++++|.-|......+-+.-|+......+.+-...-+.+.. + .+ .-+..-|.+++|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~-l-~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGR-L-RVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCce-E-EEeCccCCCCCcCCCc
Confidence 5678999999999 4579999999999999999999999997654444433211100000 0 00 000012445555
Q ss_pred hhHHHHHHHHHHC----C---CEEEEEcCCcCcHHH
Q psy16789 313 RHKLTIVKAFQAN----G---VIVGMTGDGVNDGVA 341 (608)
Q Consensus 313 ~~K~~~v~~l~~~----g---~~v~~~GDg~ND~~a 341 (608)
.-|..+++.+++. | .+|..+|||.||...
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 3688888887754 4 689999999999543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.044 Score=56.96 Aligned_cols=63 Identities=21% Similarity=0.161 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHC-C-----C-EEEEEcCCcCcHHHHHh-----CCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G-----V-IVGMTGDGVNDGVALKK-----ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g-----~-~v~~~GDg~ND~~al~~-----A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
-+|...++.+.+. | . .++++||..||-.|++. +++||+|+ ++... ..|+|.+. +...+.+.++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CHHHHHHHHH
Confidence 3899888877654 3 1 24789999999999996 58999998 55433 26778775 4555555553
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0084 Score=55.49 Aligned_cols=107 Identities=14% Similarity=0.203 Sum_probs=69.5
Q ss_pred hhccCceEEEEEccCCCCceEEEEeee--cCCCChhHHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHcCCCCCCCccc
Q psy16789 208 QTLGKGLVAMARGSNLQDLCYMGLVGI--CDPPRPHVRECMSTLLQSGVKVKLVTGDG-QETATAIASMVGLDTIHGKVL 284 (608)
Q Consensus 208 ~~~g~r~l~~a~~~~e~~l~~~G~~~~--~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~ta~~ia~~~gi~~~~~~vi 284 (608)
.+.|.+.+.+-... .+.- ...+.+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+....
T Consensus 21 ~~~~v~~vv~D~Dg---------tl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---- 87 (170)
T TIGR01668 21 KKVGIKGVVLDKDN---------TLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---- 87 (170)
T ss_pred HHCCCCEEEEecCC---------ccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc----
Confidence 45677777665432 1111 23578999999999999999999999988 67777777877764210
Q ss_pred cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 285 SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 285 ~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
+. ....|+-=..+.+.+.-....++|+||.. .|+.+-+.||+-
T Consensus 88 -~~--------------------~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 88 -HA--------------------VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred -CC--------------------CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 00 00112111122222222345699999998 799999999963
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.016 Score=54.01 Aligned_cols=27 Identities=22% Similarity=0.202 Sum_probs=24.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQ 264 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~ 264 (608)
+.+++.+++++|+++|+++.++|+-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999998763
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0042 Score=56.04 Aligned_cols=96 Identities=13% Similarity=0.010 Sum_probs=68.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
-+++|++.+.++.|+ .++++.++|+-+...+..+.+.+|+.... ..++++++..... |.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~K------------------P~- 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVK------------------GK- 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccC------------------Ce-
Confidence 357999999999998 57999999999999999999999885432 4455554432211 21
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
=....+.+......+.++||..+|..+-+.+++-|.-
T Consensus 104 ~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 104 YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 0112233333457899999999999988777666553
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.067 Score=60.09 Aligned_cols=186 Identities=15% Similarity=0.176 Sum_probs=101.8
Q ss_pred HHHHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEE
Q psy16789 34 ETGTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRF 113 (608)
Q Consensus 34 ~~~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~ 113 (608)
...+++.++.+||.+. -+|++.|++.++.+.+.... ..+.+.+||++++|+|.+.+. | .
T Consensus 326 ~~~~ll~~a~~~~~~s-------~~P~~~AIv~~a~~~~~~~~---~~~~~~~pF~~~~k~~gv~~~---g--------~ 384 (673)
T PRK14010 326 SFERLVKAAYESSIAD-------DTPEGRSIVKLAYKQHIDLP---QEVGEYIPFTAETRMSGVKFT---T--------R 384 (673)
T ss_pred cHHHHHHHHHHhcCCC-------CChHHHHHHHHHHHcCCCch---hhhcceeccccccceeEEEEC---C--------E
Confidence 3456788888888653 28999999999987764311 122345899999999998642 1 1
Q ss_pred EEccchhh-hhccccceeeeccccCCCccH--HHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCC
Q psy16789 114 FFLHRLLE-VGCVCNNASIIGDSLLGQPTE--GALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSK 190 (608)
Q Consensus 114 ~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E--~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~k 190 (608)
.+.||+++ +...|... +. ..|.+ ...-+++. .|... +... .+.+..+++
T Consensus 385 ~i~kGa~~~il~~~~~~----g~--~~~~~~~~~~~~~a~-~G~~~-------l~v~---~~~~~lG~i----------- 436 (673)
T PRK14010 385 EVYKGAPNSMVKRVKEA----GG--HIPVDLDALVKGVSK-KGGTP-------LVVL---EDNEILGVI----------- 436 (673)
T ss_pred EEEECCHHHHHHHhhhc----CC--CCchHHHHHHHHHHh-CCCeE-------EEEE---ECCEEEEEE-----------
Confidence 34499999 88888741 10 01221 11112221 12111 1000 000000000
Q ss_pred chhHHHHhhhhhhhHHHhhccCceEEEEEccCC------CCceEEEEeeecCCCChhH-HHHHHHHHhCCCeEEEEcCCc
Q psy16789 191 RDGKMILSQSCSEYPKFQTLGKGLVAMARGSNL------QDLCYMGLVGICDPPRPHV-RECMSTLLQSGVKVKLVTGDG 263 (608)
Q Consensus 191 g~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e------~~l~~~G~~~~~d~~r~~~-~~~I~~l~~~Gi~v~~~TGd~ 263 (608)
+-.+.+-++..+.++++.+.|.|+.-+.-+... ++ +|+-.+--...|+- .+.|+++++.| +++..|||-
T Consensus 437 ~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e---lGI~~v~A~~~PedK~~iV~~lQ~~G-~~VaMtGDG 512 (673)
T PRK14010 437 YLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE---AGVDRFVAECKPEDKINVIREEQAKG-HIVAMTGDG 512 (673)
T ss_pred EeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH---cCCceEEcCCCHHHHHHHHHHHHhCC-CEEEEECCC
Confidence 000011223445667777888888766544110 11 22222223344444 56788888888 556789999
Q ss_pred HHHHHHHHH
Q psy16789 264 QETATAIAS 272 (608)
Q Consensus 264 ~~ta~~ia~ 272 (608)
..-|.++++
T Consensus 513 vNDAPALa~ 521 (673)
T PRK14010 513 TNDAPALAE 521 (673)
T ss_pred hhhHHHHHh
Confidence 999988875
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.01 Score=56.47 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-cCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM-VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.++++.|+++|+++.++|+-+.......... .++....+.+++..+..... ..|+-=
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~K----------------P~p~~~ 147 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRK----------------PEARIY 147 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCC----------------CCHHHH
Confidence 4689999999999999999999999876654433222 24433233333333222111 011111
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..+.+.+.-....+.++||+..|+.+-+++|+...
T Consensus 148 ~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 148 QHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 12333333334678999999999999999997543
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.032 Score=53.67 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=56.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQET---ATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
-|.-+++.+.++.+++.|++|+++|||+... +..-.++.|+......++-+.+-... ...
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~-----------------~~~ 181 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNK-----------------TVV 181 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCc-----------------hHh
Confidence 4677999999999999999999999999765 33445567776432222211100000 001
Q ss_pred hhHHHHHHHHHHCCCEEEE-EcCCcCcHH
Q psy16789 313 RHKLTIVKAFQANGVIVGM-TGDGVNDGV 340 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~-~GDg~ND~~ 340 (608)
.-|.+.-+.+.+.|+.|.+ +||..+|..
T Consensus 182 ~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 182 TYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred HHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 1266666677777776555 999999873
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0037 Score=60.57 Aligned_cols=96 Identities=14% Similarity=0.128 Sum_probs=66.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC-ccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG-KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~-~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.| ++++.++|+.....+...-+..|+..... .++++++..... ..|+-=
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~K----------------P~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWK----------------PDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCC----------------CChHHH
Confidence 4568999999988 49999999999888888888889876553 455554432211 112211
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
..+.+.+.-....++++||+.+|+.+-+.||+....
T Consensus 149 ~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 149 FHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 222333332345689999999999999999987654
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0091 Score=53.82 Aligned_cols=93 Identities=18% Similarity=0.205 Sum_probs=59.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHcCCCCCCCccccc----hhhcccCHHHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQ---------------ETATAIASMVGLDTIHGKVLSG----DQIDQMTEHQL 297 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~vi~g----~~~~~~~~~~~ 297 (608)
++.+++.++++.|+++|+++.++|+.+. .....+.+.+|+.... ..... +...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~~~------- 98 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-VLFCPHHPADNCS------- 98 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-EEECCCCCCCCCC-------
Confidence 3679999999999999999999998762 4455667778875210 00000 0000
Q ss_pred HHHhhcceEEEEeCchhHHHHHH-HHHHC---CCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVK-AFQAN---GVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~-~l~~~---g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
....+.++.+ .+++. ...+.++||+..|+.+-+.+++-..
T Consensus 99 -------------~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 99 -------------CRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -------------CCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0111222222 22333 3569999999999999999997543
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.03 Score=55.41 Aligned_cols=85 Identities=15% Similarity=0.136 Sum_probs=59.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQE---TATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVT 311 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~ 311 (608)
.++-+++.+.++.+++.|+++.++|++... .+....+..|+.... .. ++.|-.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~-----------------------lllr~~ 173 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH-----------------------LLLKKD 173 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce-----------------------EEeCCC
Confidence 456799999999999999999999998743 334556678886532 11 233322
Q ss_pred chhHHHHHHHHHHCCCEEEEEcCCcCcHHHHH
Q psy16789 312 PRHKLTIVKAFQANGVIVGMTGDGVNDGVALK 343 (608)
Q Consensus 312 p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~ 343 (608)
...|....+.+.+....++++||..+|.....
T Consensus 174 ~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 33455556666666667888999999986544
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.0055 Score=58.87 Aligned_cols=98 Identities=13% Similarity=0.049 Sum_probs=57.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQET--ATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t--a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
-++.+++.+.++.|+++|+++.++|+..... ........++....+.++...+.... ...|+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~----------------KP~p~ 156 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLR----------------KPDPR 156 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCC----------------CCCHH
Confidence 3567999999999999999999999875432 22222233443332233222211100 01111
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
-=..+.+.+.-....++++||...|+.+-++||+-.
T Consensus 157 ~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 157 IYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 111222333323456888999999999999999743
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.018 Score=53.02 Aligned_cols=95 Identities=11% Similarity=0.020 Sum_probs=59.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcce
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQE------------TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVT 305 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~------------ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 305 (608)
+-+++.++++.|+++|+++.++|..+.. ....+.+.+|+.. ..++.+.....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCC--------------
Confidence 3489999999999999999999976542 4566778888743 22222211100
Q ss_pred EEEEeCchhHHHHHHHHH--HCCCEEEEEcCCc--------CcHHHHHhCCeeEE
Q psy16789 306 VFYRVTPRHKLTIVKAFQ--ANGVIVGMTGDGV--------NDGVALKKADIGIA 350 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~--~~g~~v~~~GDg~--------ND~~al~~A~vgia 350 (608)
....|+--..+.+.+. -....+.|+||.. +|+.+-++||+-..
T Consensus 107 --~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~ 159 (166)
T TIGR01664 107 --RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFK 159 (166)
T ss_pred --CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcC
Confidence 0011111112233332 1235699999996 69999999987654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.0029 Score=69.39 Aligned_cols=82 Identities=26% Similarity=0.272 Sum_probs=58.1
Q ss_pred HHHHHhhhhhceeeeCCccccCchHHHHHHHHHhc-Cch-----h--hhhhcccccccccccccccceeeecCCC-CCcc
Q psy16789 37 TLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF-GLY-----A--VNEHYVRLKEYPFSSEQKMMAVRCIPKE-GSSC 107 (608)
Q Consensus 37 ~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~-g~~-----~--~~~~~~~v~~~pF~s~~k~m~v~~~~~~-gt~~ 107 (608)
+-+.+.+.|++-...++.++|||+|.|.++..... ... + -.+.-.+.+++.|+|+.|+|+++..... |+
T Consensus 519 ~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~-- 596 (1160)
T KOG0209|consen 519 ETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGS-- 596 (1160)
T ss_pred hHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCC--
Confidence 34556677776665566799999999999876321 110 1 1123346889999999999999987653 33
Q ss_pred ccceEEEEccchhh
Q psy16789 108 DVDTRFFFLHRLLE 121 (608)
Q Consensus 108 ~~~~~~~~~kg~~e 121 (608)
+..+++.+||+||
T Consensus 597 -s~k~~~aVKGAPE 609 (1160)
T KOG0209|consen 597 -SEKYFVAVKGAPE 609 (1160)
T ss_pred -ceEEEEEecCCHH
Confidence 3668899999999
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.095 Score=60.71 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=32.6
Q ss_pred CCChhHHHHHHHH-HhCCCeEEEEcCCcHHHHHHHHHHc
Q psy16789 237 PPRPHVRECMSTL-LQSGVKVKLVTGDGQETATAIASMV 274 (608)
Q Consensus 237 ~~r~~~~~~I~~l-~~~Gi~v~~~TGd~~~ta~~ia~~~ 274 (608)
.+.+++.+++++| ++.|+.|+++|||...+.......+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5678999999997 7789999999999999988877553
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.041 Score=54.10 Aligned_cols=93 Identities=15% Similarity=0.232 Sum_probs=63.1
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHHHcCCCC-CCCccccchhhcccCHHHHHHHhhcceE
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT--AIASMVGLDT-IHGKVLSGDQIDQMTEHQLQQVVNSVTV 306 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~--~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v 306 (608)
|.+.-.+.+-|++.+++++|+++|+++.++|+.....+. ...+++|+.. ....+++..+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~---------------- 80 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA---------------- 80 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH----------------
Confidence 455556778899999999999999999999986654444 5678889875 444444333221
Q ss_pred EEEeCchhHHHHHHHHHH---CCCEEEEEcCCcCcHHHHHhCC
Q psy16789 307 FYRVTPRHKLTIVKAFQA---NGVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~---~g~~v~~~GDg~ND~~al~~A~ 346 (608)
...+.+.+++ .+..+.++||+..|...+..++
T Consensus 81 --------~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 --------VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred --------HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0111222222 2467999999999998886443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.032 Score=50.02 Aligned_cols=110 Identities=20% Similarity=0.265 Sum_probs=78.6
Q ss_pred hHHHhhccCceEEEEEccCCCCceEEEEeeecC-CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc
Q psy16789 204 YPKFQTLGKGLVAMARGSNLQDLCYMGLVGICD-PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK 282 (608)
Q Consensus 204 ~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d-~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 282 (608)
.+.+...|.+.+.+--.. + +++..+ +..|++++=+.+++++|+++.++|..+.......++.+|++.-
T Consensus 20 ~~~L~~~Gikgvi~DlDN-----T---Lv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi--- 88 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-----T---LVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFI--- 88 (175)
T ss_pred HHHHHHcCCcEEEEeccC-----c---eecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCcee---
Confidence 466778888877664332 1 233333 3678999999999999999999999999999999999999752
Q ss_pred cccchhhcccCHHHHHHHhhcceEEEEeCchhHH--HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 283 VLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL--TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 283 vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~--~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
+.-..|-.+. +.++.++-..+.|.|+||.. .|+-+=+.+|+=
T Consensus 89 ------------------------~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 89 ------------------------YRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred ------------------------ecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 1112233332 44444444467899999995 688887777753
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.021 Score=47.79 Aligned_cols=88 Identities=16% Similarity=0.263 Sum_probs=54.7
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HHHcCCCCCCCccccchhhcccCHHHHHHHhhcceE
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI---ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTV 306 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~i---a~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 306 (608)
|++...+.+-|++.++|+.|+++|++++++|.....+...+ .+.+|+....+.+++...
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~------------------ 68 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGM------------------ 68 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHH------------------
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHH------------------
Confidence 45556777889999999999999999999998764443333 366788754444332221
Q ss_pred EEEeCchhHHHHHHHHHH--CCCEEEEEcCCcCcHHHHHhCC
Q psy16789 307 FYRVTPRHKLTIVKAFQA--NGVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~--~g~~v~~~GDg~ND~~al~~A~ 346 (608)
.+.+.+++ .+..|..+|.. .....++.+|
T Consensus 69 ----------~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 69 ----------AAAEYLKEHKGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp ----------HHHHHHHHHTTSSEEEEES-H-HHHHHHHHTT
T ss_pred ----------HHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcC
Confidence 23344444 47788888865 4555555555
|
... |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.023 Score=53.34 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=65.0
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHH
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTI 318 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~ 318 (608)
.++ .+.++.|++. +++.++||.....+....+..|+....+.+++.++..... ..|+-=..+
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~K----------------P~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHK----------------PAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCC----------------CChHHHHHH
Confidence 344 5899999875 8999999999999999999999987666666655543211 112222233
Q ss_pred HHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 319 VKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 319 v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
.+.++.....+.++||..+|+.+-+.||+-.
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 3333333455889999999999999999643
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.053 Score=52.32 Aligned_cols=99 Identities=14% Similarity=0.146 Sum_probs=63.8
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc---CCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeC
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV---GLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVT 311 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~---gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~ 311 (608)
+-++.+++.++++.|+++|+++.++|..+......+.+.. ++........+ ..+.....
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd------------------~~~g~KP~ 154 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFD------------------TTVGLKTE 154 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEE------------------eCcccCCC
Confidence 3568899999999999999999999999887777666554 22221111100 00111111
Q ss_pred chhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 312 PRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 312 p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
|+-=..+.+.+.-....++++||...|+.+-++||+-...
T Consensus 155 p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 155 AQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred HHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2212233444443456799999999999999999975443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.057 Score=55.78 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=61.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD---------------GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV 301 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 301 (608)
++.|++.++++.|+++|+++.++|+. ....+..+.+..|+.- ....+......+ +
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~sd---~------ 99 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPED---N------ 99 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCcc---c------
Confidence 47899999999999999999999984 2334556667777741 111111100000 0
Q ss_pred hcceEEEEeCchhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 302 NSVTVFYRVTPRHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 302 ~~~~v~~r~~p~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
.. ....|..++..+.+. ...+.|+||+.+|..+-+.|++-...
T Consensus 100 ----~~---~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 100 ----CS---CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred ----CC---CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00 112233344333322 37799999999999999999976443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.11 Score=58.34 Aligned_cols=184 Identities=16% Similarity=0.209 Sum_probs=101.4
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHh-cCchhhhhhcccccccccccccccceeeecCCCCCccccceEEE
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMK-FGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFF 114 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~-~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~ 114 (608)
.+++.++++|+.+. -+|...|++.++.+ .+......+++..+..||++.+|+|.+.+. | ..
T Consensus 328 ~~ll~~a~~~s~~s-------~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~---g--------~~ 389 (679)
T PRK01122 328 EELADAAQLSSLAD-------ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLD---G--------RE 389 (679)
T ss_pred HHHHHHHHHhcCCC-------CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEEC---C--------EE
Confidence 45778888887653 15778899999876 454332333567788999999998887532 1 35
Q ss_pred Eccchhh-hhccccceeeeccccCCCcc----HHHHHHHHHHcCcccc--ccccccceeeeCChHHHHHHhHhhhcCCcC
Q psy16789 115 FLHRLLE-VGCVCNNASIIGDSLLGQPT----EGALLAAGMKFGLYAV--NEHYVRLKEYPFSSEQKMMAVRVHKIGHNL 187 (608)
Q Consensus 115 ~~kg~~e-i~~lc~~a~~~~~~~~gdp~----E~Al~~~~~~~~~~~~--~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~ 187 (608)
+.||++| +...|+.. |.+. +.+.-+++. .|.... ..+.+.+..+.+.
T Consensus 390 ~~kGa~e~il~~~~~~--------g~~~~~~~~~~~~~~a~-~G~~~l~va~~~~~lG~i~l~----------------- 443 (679)
T PRK01122 390 IRKGAVDAIRRYVESN--------GGHFPAELDAAVDEVAR-KGGTPLVVAEDNRVLGVIYLK----------------- 443 (679)
T ss_pred EEECCHHHHHHHHHhc--------CCcChHHHHHHHHHHHh-CCCcEEEEEECCeEEEEEEEe-----------------
Confidence 7899999 87888541 1111 111112221 121110 0000111111110
Q ss_pred CCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCC------CCceEEEEeeecCCCChhH-HHHHHHHHhCCCeEEEEc
Q psy16789 188 PSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNL------QDLCYMGLVGICDPPRPHV-RECMSTLLQSGVKVKLVT 260 (608)
Q Consensus 188 ~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e------~~l~~~G~~~~~d~~r~~~-~~~I~~l~~~Gi~v~~~T 260 (608)
+.+-+...+.++++.+.|.+|.-+.-...+ ++ +|+-.+--...|+- .+.|+++++.| +++..|
T Consensus 444 ------D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e---lGId~v~A~~~PedK~~iV~~lQ~~G-~~VaMt 513 (679)
T PRK01122 444 ------DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE---AGVDDFLAEATPEDKLALIRQEQAEG-RLVAMT 513 (679)
T ss_pred ------ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH---cCCcEEEccCCHHHHHHHHHHHHHcC-CeEEEE
Confidence 011123344666777778887665543110 00 12211222334444 56688899888 567789
Q ss_pred CCcHHHHHHHHHH
Q psy16789 261 GDGQETATAIASM 273 (608)
Q Consensus 261 Gd~~~ta~~ia~~ 273 (608)
||-..-|.++++.
T Consensus 514 GDGvNDAPALa~A 526 (679)
T PRK01122 514 GDGTNDAPALAQA 526 (679)
T ss_pred CCCcchHHHHHhC
Confidence 9988888888653
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.076 Score=52.37 Aligned_cols=48 Identities=23% Similarity=0.370 Sum_probs=40.9
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH---cCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM---VGLD 277 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---~gi~ 277 (608)
|++.-.+.+-+++.++++.|+++|++++++||+...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 66667778889999999999999999999999998877777666 5764
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.033 Score=52.20 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=66.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+++++|+ .++.++|+.+...+....+..|+....+.++..++..... ..+...|+-=.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~------------~~~KP~p~~~~ 148 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDY------------LLPKPSPQAYE 148 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCcc------------CCCCCCHHHHH
Confidence 36789999999997 4789999999999999999999976555555444332100 00001122112
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
.+.+.+......++++||+..|+.+-+.+|+..
T Consensus 149 ~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 149 KALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 334444444567899999999999999998754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.15 Score=50.52 Aligned_cols=48 Identities=29% Similarity=0.433 Sum_probs=37.8
Q ss_pred EEeeecCC----CChhHHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHcCCC
Q psy16789 230 GLVGICDP----PRPHVRECMSTLLQSGVKVKLVTGDGQET---ATAIASMVGLD 277 (608)
Q Consensus 230 G~~~~~d~----~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~~gi~ 277 (608)
|++.-.+. +-+++.++|++|+++|++++++||++..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 78899999999999999999999976554 45555667874
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.15 Score=50.26 Aligned_cols=38 Identities=21% Similarity=0.245 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHCCCEEEEEcC----CcCcHHHHHh-CCeeEEeC
Q psy16789 314 HKLTIVKAFQANGVIVGMTGD----GVNDGVALKK-ADIGIAMG 352 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GD----g~ND~~al~~-A~vgia~~ 352 (608)
+|...++.++ ....|+++|| |.||.+|++. -=.|+.+.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 7998999888 7788999999 8999999996 55788886
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.28 Score=50.69 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=30.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA 271 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia 271 (608)
.+-+++.++|++|+ .|++++++|||.......+.
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 37799999999999 78999999999999988774
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.048 Score=52.78 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=80.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.|++.|+.+.+.|+.....+..+.+..|+......++++++...-. ..|+-=
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~K----------------P~Pd~y 148 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGK----------------PAPDIY 148 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCC----------------CCCHHH
Confidence 4678999999999999999999999999999999999999998888888887765433 235555
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
....+.+.-....+..+.|+.+.+.|-+.||.-
T Consensus 149 L~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 149 LLAAERLGVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred HHHHHHcCCChHHeEEEecchhHHHHHHHCCCE
Confidence 555555555667899999999999999999943
|
|
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.022 Score=53.25 Aligned_cols=121 Identities=16% Similarity=0.221 Sum_probs=72.8
Q ss_pred CCChhHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch-h
Q psy16789 237 PPRPHVRECMSTLLQSGV-KVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR-H 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~-~ 314 (608)
|+-|+..++|+.+++.|- .++++|.-|.-....+.+..|+..-...+.+-...-+...+-...-...-+=|.++.+. -
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 567999999999999996 99999999999888888888885422222211111000000000000000123333332 3
Q ss_pred HHHHHHHHHHC----C---CEEEEEcCCcCc-HHHHHhCCeeEEeCCCCcH
Q psy16789 315 KLTIVKAFQAN----G---VIVGMTGDGVND-GVALKKADIGIAMGKQGTD 357 (608)
Q Consensus 315 K~~~v~~l~~~----g---~~v~~~GDg~ND-~~al~~A~vgia~~~~~~~ 357 (608)
|..+++.++.. | +.+..+|||.|| +|+++....-++|...+=+
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 65555555432 2 268889999999 6778777777887655533
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.3 Score=54.91 Aligned_cols=192 Identities=12% Similarity=0.157 Sum_probs=102.5
Q ss_pred HHHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEE
Q psy16789 35 TGTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFF 114 (608)
Q Consensus 35 ~~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~ 114 (608)
..+++..+++|+.+. .+|++.|++.++.+.|.+....+++..+..||++.+|++.+.+. +| ..
T Consensus 328 ~~~ll~~aa~~~~~s-------~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--------~~ 390 (675)
T TIGR01497 328 EKTLADAAQLASLAD-------DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--------RM 390 (675)
T ss_pred HHHHHHHHHHhcCCC-------CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--------eE
Confidence 346778888887542 36888899999988776432233456678999999888876443 22 35
Q ss_pred Eccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccc--cccccceeeeCChHHHHHHhHhhhcCCcCCCCc
Q psy16789 115 FLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVN--EHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKR 191 (608)
Q Consensus 115 ~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~--~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg 191 (608)
+.||++| +...|+.. +...-+..+.++-+++. .|..... .+.+.+..+.+.
T Consensus 391 ~~kGa~e~i~~~~~~~----g~~~~~~~~~~~~~~a~-~G~r~l~va~~~~~lG~i~l~--------------------- 444 (675)
T TIGR01497 391 IRKGAVDAIKRHVEAN----GGHIPTDLDQAVDQVAR-QGGTPLVVCEDNRIYGVIYLK--------------------- 444 (675)
T ss_pred EEECCHHHHHHHHHhc----CCCCcHHHHHHHHHHHh-CCCeEEEEEECCEEEEEEEec---------------------
Confidence 7899999 77777531 10000111222222322 1221100 000111111110
Q ss_pred hhHHHHhhhhhhhHHHhhccCceEEEEEccCC---CCceEEEEeeecCCCChh-HHHHHHHHHhCCCeEEEEcCCcHHHH
Q psy16789 192 DGKMILSQSCSEYPKFQTLGKGLVAMARGSNL---QDLCYMGLVGICDPPRPH-VRECMSTLLQSGVKVKLVTGDGQETA 267 (608)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e---~~l~~~G~~~~~d~~r~~-~~~~I~~l~~~Gi~v~~~TGd~~~ta 267 (608)
+.+-+...+.++++.+.|.++..+.-...+ .=-.-+|+-.+.-...|+ =.+.++++++.|- .++.+||...-+
T Consensus 445 --D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~PedK~~~v~~lq~~g~-~VamvGDG~NDa 521 (675)
T TIGR01497 445 --DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALIRQEQAEGK-LVAMTGDGTNDA 521 (675)
T ss_pred --ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCCHHHHHHHHHHHHHcCC-eEEEECCCcchH
Confidence 112223445677777888888766654210 000001221111233333 4567888888875 577889988888
Q ss_pred HHHHH
Q psy16789 268 TAIAS 272 (608)
Q Consensus 268 ~~ia~ 272 (608)
.++++
T Consensus 522 pAL~~ 526 (675)
T TIGR01497 522 PALAQ 526 (675)
T ss_pred HHHHh
Confidence 77764
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.14 Score=52.63 Aligned_cols=91 Identities=11% Similarity=0.057 Sum_probs=67.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----cCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM----VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
++.++++++++.|+++|+.+.++|..+...+..+.+. +|+......+ ...+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~-------------------------~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDAR-------------------------SINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEE-------------------------EEec
Confidence 3578999999999999999999999999999998887 6665432111 1223
Q ss_pred hhHHHHHHHH-HH---CCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 313 RHKLTIVKAF-QA---NGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 313 ~~K~~~v~~l-~~---~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
+.|.+.++.+ ++ ....++++||...|+.+.+.+...+.+.
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 3444434333 32 2467999999999999999888776554
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.076 Score=52.06 Aligned_cols=94 Identities=10% Similarity=0.046 Sum_probs=58.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++-+++.++++.|++. +++.++|+.+.. .+..|+......++..++..... ..|+-=.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~K----------------P~p~~~~ 170 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSK----------------PFSDMYH 170 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCC----------------CcHHHHH
Confidence 4568999999999875 899999986654 25567755444444333322111 0011111
Q ss_pred HHHHHHHHCCCEEEEEcCC-cCcHHHHHhCCeeEEeC
Q psy16789 317 TIVKAFQANGVIVGMTGDG-VNDGVALKKADIGIAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg-~ND~~al~~A~vgia~~ 352 (608)
.+.+.+.-....++|+||+ ..|+.+-+.||+-....
T Consensus 171 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 171 LAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 2222222234679999999 59999999999765543
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.078 Score=51.54 Aligned_cols=88 Identities=20% Similarity=0.197 Sum_probs=56.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHcCCCCCCCccccchhh-cccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQE---TATAIASMVGLDTIHGKVLSGDQI-DQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---ta~~ia~~~gi~~~~~~vi~g~~~-~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
+.-|++.+.++.++++|++|+.+|||+.. .+..-.++.|.......++.++.- ... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~-----------------~~~ 177 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKK-----------------SAV 177 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS---------------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccc-----------------ccc
Confidence 44578999999999999999999999744 333445566765533333222211 000 012
Q ss_pred hhHHHHHHHHHHCCCEEEE-EcCCcCcHHH
Q psy16789 313 RHKLTIVKAFQANGVIVGM-TGDGVNDGVA 341 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~-~GDg~ND~~a 341 (608)
+-|...-+.+++.|+.+.+ +||..+|..-
T Consensus 178 ~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 2477777888888766555 9999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.12 Score=52.83 Aligned_cols=51 Identities=22% Similarity=0.292 Sum_probs=41.1
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHcCCCCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA---SMVGLDTIH 280 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia---~~~gi~~~~ 280 (608)
|++.-.+.+-+++.++|+.|++.|++++++|++...+...++ +++|+....
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~ 90 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTE 90 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 666666778899999999999999999999999966666655 567875443
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.2 Score=45.06 Aligned_cols=104 Identities=20% Similarity=0.244 Sum_probs=67.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHc---CCCCCCCccccc-hhhcccCHHHHHHHhhcceEEE
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT---AIASMV---GLDTIHGKVLSG-DQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~~---gi~~~~~~vi~g-~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
|..++++.+..+++++.|.+++.+|+|+.-.+. ....+. |..-+.+.++.. +.+- ..+.. .+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~--------~al~r-Evi~ 96 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLF--------SALHR-EVIS 96 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchh--------hhhhc-cccc
Confidence 688999999999999999999999999855443 333333 212222222222 1111 11000 1344
Q ss_pred EeCchhHHHHHHHHHHC----C-CEEEEEcCCcCcHHHHHhCCee
Q psy16789 309 RVTPRHKLTIVKAFQAN----G-VIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 309 r~~p~~K~~~v~~l~~~----g-~~v~~~GDg~ND~~al~~A~vg 348 (608)
+-+.+.|....+.++.. + ..++..|...+|+.+.+++++.
T Consensus 97 ~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 97 KDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44556788888888764 3 4566699999999999988864
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.2 Score=47.46 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=56.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC----CccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH----GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
++.|++.+.+++|++.+ +.+++|..+........+.+|+.... +.++++++. .|
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---------------------~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---------------------ES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---------------------cc
Confidence 36799999999999985 56777775555444455566664211 122222211 12
Q ss_pred hhHHHHHH-HHHHCC-CEEEEEcCCcCcHHHHHhC--CeeEEe
Q psy16789 313 RHKLTIVK-AFQANG-VIVGMTGDGVNDGVALKKA--DIGIAM 351 (608)
Q Consensus 313 ~~K~~~v~-~l~~~g-~~v~~~GDg~ND~~al~~A--~vgia~ 351 (608)
|.+++. .+++.| ..++++||..+|+.+-++| |+-...
T Consensus 132 --kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 132 --KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred --cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 333333 333333 4588999999999999999 975443
|
2 hypothetical protein; Provisional |
| >KOG3040|consensus | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.47 Score=44.14 Aligned_cols=52 Identities=31% Similarity=0.409 Sum_probs=42.9
Q ss_pred ceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH---cCCC
Q psy16789 226 LCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM---VGLD 277 (608)
Q Consensus 226 l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---~gi~ 277 (608)
+.+-|++.++|..-|+..|+++.|++++.+|..+|....+.-+.+.++ +|+.
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 356799999999999999999999999999999988776666655544 5663
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.65 Score=45.74 Aligned_cols=88 Identities=22% Similarity=0.292 Sum_probs=52.7
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHH----HHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQE----TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~----ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
+.|.-+++.+..+.+++.|++|+.+|||... |..++ ++.|.......++.+..-.. .. .
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~-~~---------------~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNS-AE---------------N 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCc-cc---------------h
Confidence 3566789999999999999999999999854 33333 34677543222221110000 00 0
Q ss_pred CchhHHHHHHHHHHCCCEE-EEEcCCcCcH
Q psy16789 311 TPRHKLTIVKAFQANGVIV-GMTGDGVNDG 339 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v-~~~GDg~ND~ 339 (608)
..+.|...=+.+.+.|+.+ +.+||..+|.
T Consensus 206 av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0122444445555677665 4599999987
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=92.88 E-value=1.3 Score=44.47 Aligned_cols=92 Identities=16% Similarity=0.248 Sum_probs=57.6
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceE
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT---AIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTV 306 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 306 (608)
|++.-.+.+-+++.++|++|+++|++++++||+...+.. .-.+.+|+......+++...
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~------------------ 72 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSAL------------------ 72 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHH------------------
Confidence 555556777788999999999999999999997643332 33456787654333322111
Q ss_pred EEEeCchhHHHHHHHHHH---CCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 307 FYRVTPRHKLTIVKAFQA---NGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~---~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
.+.+.+++ .+..|.++|+. .....++.+++-+.
T Consensus 73 ----------~~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 73 ----------CAARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred ----------HHHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 12234444 24678888875 34555666665543
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.63 Score=45.93 Aligned_cols=55 Identities=13% Similarity=0.160 Sum_probs=44.1
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHcCCCCCCCccc
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTG---DGQETATAIASMVGLDTIHGKVL 284 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~~~~~~vi 284 (608)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+++|+....+.++
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ii 67 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVF 67 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe
Confidence 55555666677999999999999999999996 77888888888899876544443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.38 Score=41.80 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=28.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETA 267 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta 267 (608)
+++.+++.+++++++++|+.++++|||+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 55788999999999999999999999987643
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.66 Score=42.48 Aligned_cols=112 Identities=18% Similarity=0.225 Sum_probs=77.9
Q ss_pred HhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCC--eEEEEcCC-------cHHHHHHHHHHcCCC
Q psy16789 207 FQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGV--KVKLVTGD-------GQETATAIASMVGLD 277 (608)
Q Consensus 207 ~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi--~v~~~TGd-------~~~ta~~ia~~~gi~ 277 (608)
+.+.|.+.+.+-...- | ..-=++.+.++..+.+++|++.+. +|.++|.. +...|..+.+.+|+.
T Consensus 36 Lk~~Gik~li~DkDNT---L----~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNT---L----TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred hhhcCceEEEEcCCCC---C----CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 5567888776654421 0 012346788999999999999986 59999986 488899999999986
Q ss_pred CCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHC-----CCEEEEEcCCc-CcHHHHHhCC-eeEE
Q psy16789 278 TIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN-----GVIVGMTGDGV-NDGVALKKAD-IGIA 350 (608)
Q Consensus 278 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~-----g~~v~~~GDg~-ND~~al~~A~-vgia 350 (608)
.- ....-.|....++.+.++.. .+.++|+||-. .|+-+-...| .+|=
T Consensus 109 vl--------------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~til 162 (168)
T PF09419_consen 109 VL--------------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTIL 162 (168)
T ss_pred EE--------------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEE
Confidence 20 01112465556778887765 56799999985 6887777666 4443
Q ss_pred e
Q psy16789 351 M 351 (608)
Q Consensus 351 ~ 351 (608)
+
T Consensus 163 v 163 (168)
T PF09419_consen 163 V 163 (168)
T ss_pred E
Confidence 3
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.39 Score=47.79 Aligned_cols=54 Identities=19% Similarity=0.302 Sum_probs=46.9
Q ss_pred CC-hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcc
Q psy16789 238 PR-PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQ 291 (608)
Q Consensus 238 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~ 291 (608)
+| |++.+++++|+++|+++.++|+.....+....+.+|+......++++.+...
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 55 9999999999999999999999999999999999999977666776666543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=91.56 E-value=0.14 Score=47.41 Aligned_cols=86 Identities=16% Similarity=0.174 Sum_probs=57.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++ ++.++|+-+........+..|+......++++++..... ..|+-=.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~K----------------P~p~~f~ 146 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYK----------------PDPVVYE 146 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCC----------------CCHHHHH
Confidence 46789999988 367899999988888899999876555555555432211 1122112
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKA 345 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A 345 (608)
.+.+.+.-....++|+||+..|+.+-+++
T Consensus 147 ~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 147 LVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 33344433456799999999999876643
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.38 E-value=0.57 Score=45.26 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=66.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.+++. .++.++|.-....+....+++|+....+.++..++.... .|..+.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~------------------KP~~~~ 159 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVA------------------KPDPEI 159 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccC------------------CCCcHH
Confidence 4568889999999998 999999998888889999999987776666555544321 132221
Q ss_pred --HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee-EEeC
Q psy16789 317 --TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG-IAMG 352 (608)
Q Consensus 317 --~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg-ia~~ 352 (608)
.+.+.+.-....++++||+. ||+..-+++|.- +-+.
T Consensus 160 f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 160 FEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 23333333356799999985 674666667754 3443
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=89.49 E-value=1.8 Score=42.25 Aligned_cols=64 Identities=25% Similarity=0.200 Sum_probs=31.3
Q ss_pred EEEEeCchhHHHHHHHHHHC-C------CEEEEEcCCcCcHHHHHhC------CeeEEeCCCCcHHHHhccCEEEec
Q psy16789 306 VFYRVTPRHKLTIVKAFQAN-G------VIVGMTGDGVNDGVALKKA------DIGIAMGKQGTDVCKEAADMILVD 369 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~~~-g------~~v~~~GDg~ND~~al~~A------~vgia~~~~~~~~a~~~ad~v~~~ 369 (608)
+-.|..-..|..+++.+-+. + ..++++||...|-.|++.. ++++-++.........+|+|-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 34455555799999877665 3 2688899999999998873 567777732223334466666544
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.33 E-value=7 Score=40.41 Aligned_cols=35 Identities=14% Similarity=0.283 Sum_probs=29.6
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM 273 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~ 273 (608)
+.+++.++|+.|. ++..+.++|||+.........-
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~ 155 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKL 155 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCC
Confidence 6688999999999 5679999999999988777643
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=89.22 E-value=0.83 Score=45.55 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=44.1
Q ss_pred CC-hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhh
Q psy16789 238 PR-PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQI 289 (608)
Q Consensus 238 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~ 289 (608)
+| |++.+++++|+++|+++.++|+.+...+....+..|+......++.+++.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i 200 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRK 200 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCc
Confidence 45 99999999999999999999988888889999999998765556555544
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=88.13 E-value=5.9 Score=43.16 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=62.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-cCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE------e
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM-VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR------V 310 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r------~ 310 (608)
++++..+ .++++|.+ +++|+-....++.+|++ +|++. ++ |.+++... +-..-.+ +
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~~---------~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL-GTELEVSK---------SGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE-ecccEECc---------CCEEeeeecCCCCC
Confidence 4555444 55667854 99999999999999987 79874 11 22221100 0001111 2
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCC
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGK 353 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~ 353 (608)
.-++|.+.++..........+.||+.||.+|++.|+.+++++.
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 4456877666332212223689999999999999999999983
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.67 E-value=4 Score=40.43 Aligned_cols=139 Identities=16% Similarity=0.183 Sum_probs=82.4
Q ss_pred HHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHcCC--CCCCC
Q psy16789 205 PKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQS-GVKVKLVTGDGQETATAIASMVGL--DTIHG 281 (608)
Q Consensus 205 ~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~~gi--~~~~~ 281 (608)
+.+...+-|.+.+-|.. -|+-+.--.....+-++..+.+++|... ..-++++||++.........-.|+ ...++
T Consensus 11 ~~~~~a~~~~~~lDyDG---Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehG 87 (266)
T COG1877 11 EPYLNARKRLLFLDYDG---TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHG 87 (266)
T ss_pred cccccccceEEEEeccc---cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecc
Confidence 33444444555554442 1222222334556889999999999988 467999999999998888764444 22222
Q ss_pred ccc---cchhhcccCH------------------------------------------HH-----HHHHh----------
Q psy16789 282 KVL---SGDQIDQMTE------------------------------------------HQ-----LQQVV---------- 301 (608)
Q Consensus 282 ~vi---~g~~~~~~~~------------------------------------------~~-----~~~~~---------- 301 (608)
..+ +|.......+ ++ +....
T Consensus 88 a~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v 167 (266)
T COG1877 88 AEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRV 167 (266)
T ss_pred eEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEE
Confidence 211 2222111110 00 00000
Q ss_pred --hcceEEEEeCchhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCC
Q psy16789 302 --NSVTVFYRVTPRHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 302 --~~~~v~~r~~p~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~ 346 (608)
.+..|-+|.+-..|..+++.+.+. |..+.+.||...|-.|++..+
T Consensus 168 ~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 168 TPGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred EeCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 112256677777899888865543 335889999999999999887
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=87.06 E-value=1.8 Score=44.59 Aligned_cols=105 Identities=18% Similarity=0.191 Sum_probs=67.5
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc-C-------CCCCCCccccchh----------hcccCHH----H
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV-G-------LDTIHGKVLSGDQ----------IDQMTEH----Q 296 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-g-------i~~~~~~vi~g~~----------~~~~~~~----~ 296 (608)
-|++++.+++|+++|+++.++|+.+...+..+.+.+ | +....+.++++.. +...+.+ .
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 589999999999999999999999999999999986 6 4444444444332 1111110 0
Q ss_pred HHHH--hhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCc-CcHHHHH-hCC
Q psy16789 297 LQQV--VNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGV-NDGVALK-KAD 346 (608)
Q Consensus 297 ~~~~--~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~-ND~~al~-~A~ 346 (608)
.... +.+-.|++.-+- ..+.+.+...+..|+++||.. .|+-.-+ .++
T Consensus 266 ~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~G 316 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRG 316 (343)
T ss_pred CCccccccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcC
Confidence 0000 122234443322 234555566789999999996 5887666 566
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.84 E-value=14 Score=36.70 Aligned_cols=110 Identities=16% Similarity=0.235 Sum_probs=71.4
Q ss_pred EEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----cCCCCCCCccccchhhcccCHHHHHHHhhc
Q psy16789 228 YMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM----VGLDTIHGKVLSGDQIDQMTEHQLQQVVNS 303 (608)
Q Consensus 228 ~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 303 (608)
+=|++.-.+.+-|++.++|+.|+++|++++.+|..+..+...++++ .+++...+.+++...
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~--------------- 79 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGD--------------- 79 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHH---------------
Confidence 3477888888999999999999999999999998776655544433 344333322222111
Q ss_pred ceEEEEeCchhHHHHHHHHHHC--CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC
Q psy16789 304 VTVFYRVTPRHKLTIVKAFQAN--GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD 371 (608)
Q Consensus 304 ~~v~~r~~p~~K~~~v~~l~~~--g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~ 371 (608)
...+.+++. +.+|.++|.. .+...++.+|+-+.-..+. . ..|+|+...+
T Consensus 80 -------------at~~~l~~~~~~~kv~viG~~-~l~~~l~~~G~~~~~~~~~--~---~~d~Vv~g~d 130 (269)
T COG0647 80 -------------ATADYLAKQKPGKKVYVIGEE-GLKEELEGAGFELVDEEEP--A---RVDAVVVGLD 130 (269)
T ss_pred -------------HHHHHHHhhCCCCEEEEECCc-chHHHHHhCCcEEeccCCC--C---cccEEEEecC
Confidence 223445543 3689999954 6778888888777754122 1 2576665433
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.75 E-value=2.1 Score=39.63 Aligned_cols=97 Identities=19% Similarity=0.211 Sum_probs=55.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCH---HHHHHHhhc--ceEEEEeCc
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTE---HQLQQVVNS--VTVFYRVTP 312 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~---~~~~~~~~~--~~v~~r~~p 312 (608)
+.+++.+++.+++++|.+++|+|.- -|+.... .+..++..... ..+.+.--+ ...+|.-.|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgy---f~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p 97 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGY---FTEADFDKLHNKMLKILASQGVKIDGILYCPHHP 97 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccC---ccHHHHHHHHHHHHHHHHHcCCccceEEECCCCC
Confidence 4689999999999999999999852 2222111 11111111110 001110000 013333333
Q ss_pred hh--------HHHHHHHHHHCC---CEEEEEcCCcCcHHHHHhCCee
Q psy16789 313 RH--------KLTIVKAFQANG---VIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 313 ~~--------K~~~v~~l~~~g---~~v~~~GDg~ND~~al~~A~vg 348 (608)
++ ...+.+.+++.+ ....++||...|..+-..|+++
T Consensus 98 ~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 98 EDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 32 234455556554 6788999999999999999987
|
|
| >KOG3085|consensus | Back alignment and domain information |
|---|
Probab=86.68 E-value=1.7 Score=42.08 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=67.2
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHH
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTI 318 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~ 318 (608)
-++..+++++||++|..+.++|.=....- .+-..+|+....+.++.+-+.....+ .|.-=...
T Consensus 115 ~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~e~g~~KP----------------Dp~If~~a 177 (237)
T KOG3085|consen 115 LDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESCEVGLEKP----------------DPRIFQLA 177 (237)
T ss_pred ccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhhhhccCCC----------------ChHHHHHH
Confidence 35666999999999988888886554443 77777888655544444333322211 12222245
Q ss_pred HHHHHHCCCEEEEEcCC-cCcHHHHHhCCe-eEEeCCCCcHHHHh
Q psy16789 319 VKAFQANGVIVGMTGDG-VNDGVALKKADI-GIAMGKQGTDVCKE 361 (608)
Q Consensus 319 v~~l~~~g~~v~~~GDg-~ND~~al~~A~v-gia~~~~~~~~a~~ 361 (608)
++.+......++++||. .||...-+.+|. ++-+. +.....++
T Consensus 178 l~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~-~~~~~~~~ 221 (237)
T KOG3085|consen 178 LERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD-NSITALKE 221 (237)
T ss_pred HHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc-cccchhhh
Confidence 55566667789999997 699999999984 55554 54444433
|
|
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=85.32 E-value=1.2 Score=48.55 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=40.6
Q ss_pred hhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhh-hhccccc
Q psy16789 75 AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~ 128 (608)
+.+..+..++=+|||+..|+.+.-+.+.+|+ .....||+|| ++.+|+.
T Consensus 391 eara~ikevhF~PFnPV~Krta~ty~d~dG~------~~r~sKGAPeqil~l~~~ 439 (942)
T KOG0205|consen 391 EARAGIKEVHFLPFNPVDKRTALTYIDPDGN------WHRVSKGAPEQILKLCNE 439 (942)
T ss_pred HHhhCceEEeeccCCccccceEEEEECCCCC------EEEecCCChHHHHHHhhc
Confidence 4456666777789999999999999998877 3667899999 9999997
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=83.05 E-value=2.2 Score=46.74 Aligned_cols=40 Identities=25% Similarity=0.392 Sum_probs=32.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHHHcCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQ------------ETATAIASMVGLD 277 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~------------~ta~~ia~~~gi~ 277 (608)
+-+++++++++|+++|++++++|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997544 3456677777764
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=82.01 E-value=1.3 Score=40.54 Aligned_cols=92 Identities=15% Similarity=0.103 Sum_probs=62.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC-CCCccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT-IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
=..||++.+.++.|.+. ..+++.|......|..+.+.++... ....++..+..... .+
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~------------------~~-- 99 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT------------------NG-- 99 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe------------------CC--
Confidence 35799999999999987 9999999999999999999988754 22233332221110 01
Q ss_pred HHHHHHHHH---HCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 315 KLTIVKAFQ---ANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 315 K~~~v~~l~---~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..++.+. .....|.++||...|..+-+.+++-+.
T Consensus 100 --~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 100 --KYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred --CEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 1222222 334679999999998877666655444
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=81.54 E-value=7.7 Score=37.82 Aligned_cols=50 Identities=24% Similarity=0.362 Sum_probs=37.5
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHH-cCCCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVT---GDGQETATAIASM-VGLDTI 279 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~-~gi~~~ 279 (608)
|++.-.+.+-+++.++|+.++++|++++++| |+..........+ .|+...
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~ 60 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVS 60 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 5555556677899999999999999999998 6666655554444 677543
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.22 E-value=3.8 Score=37.27 Aligned_cols=91 Identities=22% Similarity=0.298 Sum_probs=61.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQ----ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
|++-+++.|..-++.|=.+..+|||.. .+++.+|+...|...+.....|+.-. ...-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k-------------------~~qy 175 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKPK-------------------PGQY 175 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCCC-------------------cccc
Confidence 556667888888899999999999974 45667788888866554433333211 0111
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEe
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAM 351 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~ 351 (608)
.| ...+|+++. -..-||+-||+.|-++|++ ||-+
T Consensus 176 ~K---t~~i~~~~~-~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 176 TK---TQWIQDKNI-RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred cc---cHHHHhcCc-eEEecCCchhhhHHHhcCccceeE
Confidence 23 445565544 3457999999999999985 5655
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 608 | ||||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-52 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-52 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-52 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-49 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 7e-41 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 9e-41 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 7e-40 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 7e-39 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 7e-23 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-18 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 8e-16 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 5e-15 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 6e-15 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-14 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 1e-14 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 2e-14 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-14 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-14 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-11 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-11 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 3e-11 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 7e-10 |
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 608 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-179 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-145 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-11 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-131 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 5e-13 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-11 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-109 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 6e-04 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-107 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 3e-04 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 9e-36 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 3e-32 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-32 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-31 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-30 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-10 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 9e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-05 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 5e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 2e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 532 bits (1372), Expect = e-179
Identities = 147/583 (25%), Positives = 255/583 (43%), Gaps = 111/583 (19%)
Query: 116 LHRLLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLY-------------- 155
L L + +CN++S+ + +G+ TE AL K ++
Sbjct: 411 LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERAN 470
Query: 156 ----AVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKM--------ILSQSCS- 202
+ + + FS ++K M+V + + KM ++ + C+
Sbjct: 471 ACNSVIRQLMKKEFTLEFSRDRKSMSV-YCSPAKSSRAAVGNKMFVKGAPEGVIDR-CNY 528
Query: 203 --------------------EYPKFQTLGKGL--VAMAR------------------GSN 222
++ T L +A+A
Sbjct: 529 VRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEY 588
Query: 223 LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL----DT 278
DL ++G+VG+ DPPR V + +G++V ++TGD + TA AI +G+ +
Sbjct: 589 ETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE 648
Query: 279 IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVND 338
+ + +G + D + + ++ F RV P HK IV+ Q+ I MTGDGVND
Sbjct: 649 VADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVND 708
Query: 339 GVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLS 398
ALKKA+IGIAMG GT V K A++M+L DD+F+TI+AA+EEG+ I+ N++ F+R+ +S
Sbjct: 709 APALKKAEIGIAMGS-GTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLIS 767
Query: 399 TSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKE 458
+++ + I L L +P L +Q+LW+N++ DG PA +LG P D D+ + PR+ KE
Sbjct: 768 SNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKE 827
Query: 459 PMITRALVVNVLMSASIIIVGTLYVF-------------------------------KRE 487
P+I+ L + + T+ +
Sbjct: 828 PLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGL 887
Query: 488 MSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLF 547
+ + TM + V +M NAL+ S+ +S+ + + N L ++C S+
Sbjct: 888 DCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFL 947
Query: 548 VIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIER 590
++Y PL +F+ +AL + + ++ V + EI K I R
Sbjct: 948 ILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIAR 990
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 446 bits (1149), Expect = e-145
Identities = 143/600 (23%), Positives = 226/600 (37%), Gaps = 131/600 (21%)
Query: 116 LHRLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGLY--AVNEHYVRL 164
L V +CN A+ ++G +E ALL E + ++
Sbjct: 428 WRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKV 487
Query: 165 KEYPFSSEQKMMAVRVHKIGHNLPSKRDGK----------MILSQSCSEY---------- 204
E PF+S K H L RD + +L + CS
Sbjct: 488 CEIPFNSTNKFQLSI-----HTLEDPRDPRHVLVMKGAPERVLER-CSSILIKGQELPLD 541
Query: 205 ----PKFQTL-----GKGL--VAMAR-------------------GSNLQDLCYMGLVGI 234
FQT G G + + L + GLV +
Sbjct: 542 EQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSM 601
Query: 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL------------------ 276
DPPR V + + +G++V +VTGD TA AIA+ VG+
Sbjct: 602 IDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVP 661
Query: 277 ------DTIHGKVLSGDQIDQMTEHQLQQVV--NSVTVFYRVTPRHKLTIVKAFQANGVI 328
V++G Q+ M +L + + + VF R +P+ KL IV++ Q G I
Sbjct: 662 VDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAI 721
Query: 329 VGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYN 388
V +TGDGVND ALKKADIG+AMG G+D K AADMIL+DD+F +I+ +E+G+ IF N
Sbjct: 722 VAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDN 781
Query: 389 IRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDV 448
++ + + L+ +I L+ + + +P PL + IL+I + D P+ SL E + D+
Sbjct: 782 LKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDI 841
Query: 449 KIQKPRNVKEPMIT--RALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDT-------- 498
+PRN K + + +I + M+
Sbjct: 842 MHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWE 901
Query: 499 ----------------------------TMTFTCFVFFDMFNALSCRSQIKSVFTIGLFT 530
T+ F + + L +++ S F G F
Sbjct: 902 NHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFR 961
Query: 531 NKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIER 590
N++ + A+ V F+ Y P + +F + +F EI+K R
Sbjct: 962 NRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 1e-11
Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 11/88 (12%)
Query: 21 GDGRNSSRIRSKPETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKF 71
D + +S L V +CN A+ ++G +E ALL
Sbjct: 414 EDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELT 473
Query: 72 GLY--AVNEHYVRLKEYPFSSEQKMMAV 97
E + ++ E PF+S K
Sbjct: 474 LGNAMGYRERFPKVCEIPFNSTNKFQLS 501
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 408 bits (1050), Expect = e-131
Identities = 120/431 (27%), Positives = 195/431 (45%), Gaps = 65/431 (15%)
Query: 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL------- 276
DLC++GL+ + DPPR V + + +G+KV +VTGD TA AIA VG+
Sbjct: 586 TDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET 645
Query: 277 -----------------DTIHGKVLSGDQIDQMTEHQLQQVVNSVT--VFYRVTPRHKLT 317
V+ G + ++ L +++ T VF R +P+ KL
Sbjct: 646 IEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLI 705
Query: 318 IVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377
IV+ Q G IV +TGDGVND ALKKADIG+AMG G+DV K+AADMIL+DD+F +I+
Sbjct: 706 IVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVT 765
Query: 378 AIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQ 437
+EEG+ IF N++ + + L+++I ++ + + +P PL + IL I++ D PA
Sbjct: 766 GVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAI 825
Query: 438 SLGVEPVDDDVKIQKPRNVKEPMIT--RALVVNVLMSASIIIVGTLYVFKREMSDNIVSK 495
SL E + D+ ++PRN K + R + + I +G + + +++N
Sbjct: 826 SLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLP 885
Query: 496 RD------------------------------------TTMTFTCFVFFDMFNALSCRSQ 519
D T F V + + C+++
Sbjct: 886 MDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR 945
Query: 520 IKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVF 579
S+F G NK+ +F + F+ Y P + L + + +F
Sbjct: 946 RNSIFQQG-MKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIF 1004
Query: 580 FVSEIKKAIER 590
E+++ I R
Sbjct: 1005 LYDEMRRFIIR 1015
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 5e-13
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 12/87 (13%)
Query: 116 LHRLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGLY--AVNEHYVRL 164
L + +CN A S+ G +E ALL + + ++
Sbjct: 423 WSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKI 482
Query: 165 KEYPFSSEQKMMAVRVHKIGHNLPSKR 191
E PF+S K +H+ + S+
Sbjct: 483 VEIPFNSTNKYQLS-IHENEKSSESRY 508
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-11
Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 11/88 (12%)
Query: 21 GDGRNSSRIRSKPETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKF 71
+ ++ ++ L + +CN A S+ G +E ALL
Sbjct: 409 ENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELC 468
Query: 72 GLY--AVNEHYVRLKEYPFSSEQKMMAV 97
+ + ++ E PF+S K
Sbjct: 469 CGSVQGMRDRNPKIVEIPFNSTNKYQLS 496
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 347 bits (893), Expect = e-109
Identities = 100/547 (18%), Positives = 195/547 (35%), Gaps = 70/547 (12%)
Query: 93 KMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF 152
K+ G + L+ C+ + + A L + +
Sbjct: 387 KLSLHDPYTVAGVDPE---------DLMLTACLAASR----KKKGIDAIDKAFLKSLKYY 433
Query: 153 GLY-AVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKM----------ILSQSC 201
+V Y L+ +PF K + V G+ +L
Sbjct: 434 PRAKSVLSKYKVLQFHPFDPVSKKVVAVVES--------PQGERITCVKGAPLFVLKTVE 485
Query: 202 SEYP-----------KFQTLG-KGL--VAMARGSNLQDLCYMGLVGICDPPRPHVRECMS 247
++P K +G + +AR +G++ DPPR + +
Sbjct: 486 EDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVC 545
Query: 248 TLLQSGVKVKLVTGDGQETATAIASMVGLDT--IHGKVLSGDQIDQMTEHQLQQVVNSVT 305
G+ +K++TGD A + +GL T + + L M ++ V +
Sbjct: 546 EAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAAD 605
Query: 306 VFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADM 365
F V P+HK +V+ Q G +V MTGDGVND +LKKAD GIA+ +D + AAD+
Sbjct: 606 GFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEG-SSDAARSAADI 664
Query: 366 ILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQIL 425
+ + II A++ + IF+ + +V ++++ SI + L + + LN ++
Sbjct: 665 VFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAI-LNRSLNIELVV 723
Query: 426 WINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSA--SIIIVGTLYV 483
+I I D ++ + Q P P + V+ ++ A + I V T+Y
Sbjct: 724 FIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPKLWGMSVLLGVVLAVGTWITVTTMYA 779
Query: 484 FKREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVV 543
+ F + + R+ G F + + + + ++
Sbjct: 780 QGENGGIVQNFGNMDEVLFLQISLTENWLIFITRAN-------GPFWSSIPSWQLSGAIF 832
Query: 544 GQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAI-------ERICERKC 596
+ + F+ +I + + + +F + I + + K
Sbjct: 833 LVDILATCFTIWGWFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVGFDNLMHGKS 892
Query: 597 LRSSKKQ 603
+ ++KQ
Sbjct: 893 PKGNQKQ 899
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 5/68 (7%)
Query: 38 LLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLY-AVNEHYVRLKEYPFSSEQKMMA 96
L+ C+ + + A L + + +V Y L+ +PF K +
Sbjct: 404 LMLTACLAASR----KKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVV 459
Query: 97 VRCIPKEG 104
+G
Sbjct: 460 AVVESPQG 467
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-107
Identities = 103/528 (19%), Positives = 189/528 (35%), Gaps = 59/528 (11%)
Query: 117 HRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMM 176
++L + + D + A++ + PF+ K
Sbjct: 356 DQVLLFAAMASRVEN-QD-----AIDAAMVGMLADPKE--ARAGIREVHFLPFNPVDKRT 407
Query: 177 AVRVHKIGHNL---------------PSKRDGKMILSQSCSEYPK--FQTLG---KGLVA 216
A+ N + D + +Y + ++L + +
Sbjct: 408 ALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPE 467
Query: 217 MARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL 276
+ S ++GL+ + DPPR E + L GV VK++TGD +G+
Sbjct: 468 KTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 527
Query: 277 DTIH---GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTG 333
T +L + + +++++ F V P HK IVK Q IVGMTG
Sbjct: 528 GTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTG 587
Query: 334 DGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFV 393
DGVND ALKKADIGIA+ TD + A+D++L + + II+A+ + IF ++N+
Sbjct: 588 DGVNDAPALKKADIGIAVAD-ATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 646
Query: 394 RFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKP 453
+ +S +I + L L+ +A +L I I+ DG ++ + V P
Sbjct: 647 IYAVSITIRIVFGFMLIALIW-EFDFSAFMVLIIAILNDG-TIMTISKDRVKPS---PTP 701
Query: 454 RNVKEPMI-TRALVVNVLMSASIIIV--GTLYVFKREMSDNIVSKRDT-----TMTFTCF 505
+ K I +V+ + +I + + S RD +
Sbjct: 702 DSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQV 761
Query: 506 VFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTI 565
RS +S + + + + A ++ L +Y + + +
Sbjct: 762 SIISQALIFVTRS--RSWSFVERPGALLMIAFLIAQLIATLIAVY--ANWEFAKIRGIGW 817
Query: 566 NDIAFLTALTSTVFFVSEIKKAIER----------ICERKCLRSSKKQ 603
+ + +F ++ K R + E K + KK
Sbjct: 818 GWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKD 865
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 9/67 (13%), Positives = 18/67 (26%), Gaps = 8/67 (11%)
Query: 38 LLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAV 97
+L + + D + A++ + PF+ K A+
Sbjct: 358 VLLFAAMASRVEN-QD-----AIDAAMVGMLADPKE--ARAGIREVHFLPFNPVDKRTAL 409
Query: 98 RCIPKEG 104
I G
Sbjct: 410 TYIDGSG 416
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 9e-36
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 28/161 (17%)
Query: 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQI 289
I D PRP++++ + L G+K+ +++GD ++ ++ + + + +
Sbjct: 129 ASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS----- 183
Query: 290 DQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349
P K+ I++ + NG V M GDGVND AL AD+ +
Sbjct: 184 ----------------------PEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSV 221
Query: 350 AMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390
AMG G D+ K AD+ILV +D T++ I+ K + I
Sbjct: 222 AMGN-GVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-32
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 206 KFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQE 265
K + GK +V + + + G++ + D RP RE +S L G+K ++TGD +
Sbjct: 118 KLKQQGKTVVFILKNGEV-----SGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRF 172
Query: 266 TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN 325
A +A +GLD +VL P K VK Q
Sbjct: 173 VAKWVAEELGLDDYFAEVL---------------------------PHEKAEKVKEVQQK 205
Query: 326 GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGI 385
V M GDGVND AL +AD+GIA+G GTDV E AD++LV +D + A +E +
Sbjct: 206 YV-TAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKT 263
Query: 386 FYNIR 390
+
Sbjct: 264 YSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 3e-32
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 29/161 (18%)
Query: 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQI 289
G++ + D + + + L + G+KV ++TGD +A AI+ + LD + +VL
Sbjct: 156 GIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL----- 210
Query: 290 DQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349
P K VK QA V V GDG+ND AL +AD+GI
Sbjct: 211 ----------------------PHQKSEEVKKLQAKEV-VAFVGDGINDAPALAQADLGI 247
Query: 350 AMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390
A+G G+DV E+ D++L+ DD ++AAI+ + I+
Sbjct: 248 AVGS-GSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 4e-32
Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 33/185 (17%)
Query: 206 KFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQE 265
+ + G ++ MA + L+ + DP + E + L QSG+++ ++TGD +
Sbjct: 528 ELRGKGASVMFMAVDGKT-----VALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKR 582
Query: 266 TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN 325
TA A+A +G+ + +++ P K IV +
Sbjct: 583 TAEAVAGTLGIKKVVAEIM---------------------------PEDKSRIVSELKDK 615
Query: 326 GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGI 385
G+IV M GDGVND AL KADIGIAMG GTDV E+A + L+ D I A +
Sbjct: 616 GLIVAMAGDGVNDAPALAKADIGIAMGT-GTDVAIESAGVTLLHGDLRGIAKARRLSEST 674
Query: 386 FYNIR 390
NIR
Sbjct: 675 MSNIR 679
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 3e-31
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 34/185 (18%)
Query: 206 KFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQE 265
K + K V +AR + G++ + D + + + L + G+KV ++TGD
Sbjct: 431 KLEREAKTAVIVARNGRV-----EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWR 485
Query: 266 TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN 325
+A AI+ + LD + +VL P K VK QA
Sbjct: 486 SAEAISRELNLDLVIAEVL---------------------------PHQKSEEVKKLQAK 518
Query: 326 GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGI 385
V V GDG+ND AL +AD+GIA+G G+DV E+ D++L+ DD ++AAI+ +
Sbjct: 519 EV-VAFVGDGINDAPALAQADLGIAVGS-GSDVAVESGDIVLIRDDLRDVVAAIQLSRKT 576
Query: 386 FYNIR 390
I+
Sbjct: 577 MSKIK 581
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 5e-30
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 34/185 (18%)
Query: 206 KFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQE 265
K + K V +AR + G++ + D + + + L + G+KV ++TGD
Sbjct: 509 KLEREAKTAVIVARNGRV-----EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWR 563
Query: 266 TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN 325
+A AI+ + LD + +VL P K VK QA
Sbjct: 564 SAEAISRELNLDLVIAEVL---------------------------PHQKSEEVKKLQAK 596
Query: 326 GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGI 385
V V GDG+ND AL +AD+GIA+G G+DV E+ D++L+ DD ++AAI+ +
Sbjct: 597 EV-VAFVGDGINDAPALAQADLGIAVGS-GSDVAVESGDIVLIRDDLRDVVAAIQLSRKT 654
Query: 386 FYNIR 390
I+
Sbjct: 655 MSKIK 659
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-10
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 118 RLLEVGCVCNNA-SIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMM 176
R+L + ++ + + + + A+L + ++ + ++ E PF E++ M
Sbjct: 17 RVLHSAWLNSHYQTGLKN-----LLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRM 71
Query: 177 AVRVHKIGHN 186
+V V
Sbjct: 72 SV-VVAENTE 80
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 2e-09
Identities = 9/65 (13%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 34 ETGTLLEVGCVCNNA-SIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQ 92
+ +L + ++ + + + + A+L + ++ + ++ E PF E+
Sbjct: 14 TSERVLHSAWLNSHYQTGLKN-----LLDTAVLEGTDEESARSLASRWQKIDEIPFDFER 68
Query: 93 KMMAV 97
+ M+V
Sbjct: 69 RRMSV 73
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 5e-07
Identities = 98/682 (14%), Positives = 181/682 (26%), Gaps = 211/682 (30%)
Query: 5 DLIRLEFRPSFLEKVH-GDGRNSSR-IRSKPETGTLLEVGCVCNNASIIGDSLLGQPTEG 62
D++ + F +F++ D ++ + I SK E ++ + + +LL + E
Sbjct: 20 DILSV-FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM 78
Query: 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEV 122
KF V E V Y F + TR + R
Sbjct: 79 V-----QKF----VEE--VLRINYKFLMSP--IKTEQRQPSM-----MTRMYIEQR---- 116
Query: 123 GCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVN--EHYVRLKEYPFSSEQKMMAVRV 180
D L F Y V+ + Y++L++ + V +
Sbjct: 117 -----------DRLYNDNQ---------VFAKYNVSRLQPYLKLRQA-LLELRPAKNVLI 155
Query: 181 H-KIGHNLPSKRDGKMIL-SQSCSEYPKFQ----------TLGKGLVAMARGSNLQDLCY 228
+G GK + C Y K Q L LQ L Y
Sbjct: 156 DGVLGS-------GKTWVALDVCLSY-KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 229 M---GLVGICDPP-----RPH-VRECMSTLLQS------------------------GVK 255
D R H ++ + LL+S K
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK 267
Query: 256 VKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVT---- 311
+ L T + T H + +T + ++ +
Sbjct: 268 ILLTTRF----KQVTDFLSAATTTH--ISLDHHSMTLTPDE------VKSLLLKYLDCRP 315
Query: 312 ---PRHKLTIVKAFQANGVIVGMTGDGVNDGVA----LKKADIGIAMGKQGTDVCKEAAD 364
PR LT N + + + + DG+A K +
Sbjct: 316 QDLPREVLTT------NPRRLSIIAESIRDGLATWDNWKHVNC----------------- 352
Query: 365 MILVDDDFNTIIAAI------EEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNP 418
D TII + E + +F F S I P
Sbjct: 353 -----DKLTTIIESSLNVLEPAEYRKMF---DRLSVFPPSAHI----------------P 388
Query: 419 LNAMQILWINI-------IMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLM 471
+ ++W ++ +++ SL V+ K + P I L V +
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSL----VEKQ---PKESTISIPSIYLELKVKLEN 441
Query: 472 SASI--IIVGTLYVFKREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLF 529
++ IV Y + + + F + + N + ++F + +F
Sbjct: 442 EYALHRSIVDH-YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE--HPERMTLFRM-VF 497
Query: 530 TNKMFLFA-VCASVVGQLFVIYFPPLQKVFQT--EALTINDIAFLTALTSTVFFVSEIKK 586
+ FL + + + + ND + L V+ I
Sbjct: 498 LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY-ERL------VNAILD 550
Query: 587 AIERICERKCLRSSKKQSMDFV 608
+ + E + S + D +
Sbjct: 551 FLPK-IEENLICS---KYTDLL 568
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 9e-06
Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 10/148 (6%)
Query: 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS-MVGLDTIHGKVL--SGDQIDQMT 293
R RE ++ + + + +++G + +V D I+ D I
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 294 EHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGK 353
H + ++ K +++ + M GD V D A K +D+ A
Sbjct: 137 PHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA-RD 189
Query: 354 QGTDVCKEAADMILVDDDFNTIIAAIEE 381
+ C+E L DF I IE
Sbjct: 190 YLLNECREQNLNHLPYQDFYEIRKEIEN 217
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 16/149 (10%)
Query: 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQ 296
P + + + G K +++G + + LD + + + +T++
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTV-EIRDNVLTDNI 237
Query: 297 LQQVVNSVTVFYRVTPRHKLTIVKAFQA-NGVIVGMT---GDGVNDGVALKKADIGIAMG 352
++N+ K + A + GDG ND L+ A GIA
Sbjct: 238 TLPIMNAAN---------KKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK 288
Query: 353 KQGTDVCKEAADMILVDDDFNTIIAAIEE 381
V +E + F ++ IE+
Sbjct: 289 --AKPVVREKIHHQINYHGFELLLFLIED 315
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 5e-05
Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 17/146 (11%)
Query: 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQ 296
P E + L + +V +++ E + + +G T+ H+
Sbjct: 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLC-------------HK 114
Query: 297 LQQVVNSVTVFYRVTPR-HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQG 355
L+ + V Y++ + K V AF++ V GD ND L +A GI
Sbjct: 115 LEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF--HA 172
Query: 356 TDVCKEAADMILVDDDFNTIIAAIEE 381
+ + + +
Sbjct: 173 PENVIREFPQFPAVHTYEDLKREFLK 198
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 32/156 (20%), Positives = 54/156 (34%), Gaps = 33/156 (21%)
Query: 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-----------GKVLSGDQ 288
P +RE +S L + V+V L++G + +AS + + + G+ D+
Sbjct: 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE 148
Query: 289 IDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVI--VGMTGDGVNDGVALKKAD 346
E K ++K + + M GDG D A AD
Sbjct: 149 TQPTAESG-----------------GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPAD 191
Query: 347 IGIAM-GKQGTDVCKEAADMILVDDDFNTIIAAIEE 381
I G K+ A + DF ++ +EE
Sbjct: 192 AFIGFGGNVIRQQVKDNAKWYI--TDFVELLGELEE 225
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-04
Identities = 33/149 (22%), Positives = 49/149 (32%), Gaps = 18/149 (12%)
Query: 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQ 296
P E +S L + KV +G ++ LD L + D +
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTL-IVENDALNGLV 133
Query: 297 LQQVVNSVTVFYRVTPRHKLTIVKAFQA-NGVIVGMT---GDGVNDGVALKKADIGIA-M 351
++ S K ++ Q + T GDG ND K A I IA
Sbjct: 134 TGHMMFS---------HSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFN 184
Query: 352 GKQGTDVCKEAADMILVDDDFNTIIAAIE 380
K +V K+ A + + D I IE
Sbjct: 185 AK---EVLKQHATHCINEPDLALIKPLIE 210
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 608 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.7 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.78 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.73 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.65 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.64 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.38 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.3 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.25 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.24 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.2 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.19 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.17 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.15 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.12 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.12 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.12 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.11 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.11 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.08 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.06 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.05 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.04 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 99.02 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.0 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.0 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.0 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.94 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.93 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.87 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.85 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.85 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.83 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.81 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.8 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.79 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.75 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.73 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.73 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.73 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.72 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.72 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.72 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.71 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 98.69 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.67 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.66 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.65 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.64 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.64 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.63 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.62 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.58 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.57 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.55 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.5 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.5 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.49 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.49 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.47 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.46 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.46 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.44 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.44 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.43 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.42 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.41 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.39 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.39 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.37 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.36 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.36 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.35 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.34 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.34 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.32 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.31 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.3 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.29 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.29 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.28 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.26 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.23 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.22 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.21 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.19 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.19 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.18 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.17 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.16 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.16 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.15 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.15 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.14 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.14 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.13 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.13 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.12 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.08 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.06 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.05 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.05 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.99 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.99 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.96 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.91 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.89 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.88 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.83 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.79 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.78 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.71 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.65 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.61 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.59 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.56 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.56 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.56 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.56 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.55 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.5 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.48 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.48 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.12 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 97.11 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.05 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 97.02 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.99 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.95 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.94 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 96.86 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.85 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.81 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.81 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.78 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.55 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.39 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.37 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.29 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.29 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 96.07 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 95.85 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 95.42 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.0 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 94.82 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.02 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 92.93 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 92.66 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 92.07 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 91.55 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 91.14 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 90.01 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 89.58 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 83.09 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-79 Score=714.72 Aligned_cols=537 Identities=27% Similarity=0.411 Sum_probs=466.7
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--c-----------------------
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--H----------------------- 117 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--k----------------------- 117 (608)
+.+..+...|..++.++...+++.+..++.+.++++|.|||||+|+|++.+..+ .
T Consensus 348 ~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (1034)
T 3ixz_A 348 ATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSET 427 (1034)
T ss_pred HHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHH
Confidence 334555556667888999999999999999999999999999999998876532 0
Q ss_pred --chhhhhccccceeeecc---------ccCCCccHHHHHHHHHHcCccc--cccccccceeeeCChHHHHHHhHhhh--
Q psy16789 118 --RLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGLYA--VNEHYVRLKEYPFSSEQKMMAVRVHK-- 182 (608)
Q Consensus 118 --g~~ei~~lc~~a~~~~~---------~~~gdp~E~Al~~~~~~~~~~~--~~~~~~~~~~~pF~s~~k~m~v~~~~-- 182 (608)
...+++++||++....+ ...|||+|.|+++++++.+... .+++|+.+.++||+|++|+|++++..
T Consensus 428 ~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~ 507 (1034)
T 3ixz_A 428 WRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLED 507 (1034)
T ss_pred HHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecC
Confidence 01125688998876422 3679999999999999876433 46788999999999999999877642
Q ss_pred ---cCCcCCCCchhHHHHhhhh--------------------hhhHHHhhccCceEEEEEcc------------------
Q psy16789 183 ---IGHNLPSKRDGKMILSQSC--------------------SEYPKFQTLGKGLVAMARGS------------------ 221 (608)
Q Consensus 183 ---~~~~~~~kg~~~~~~~~~~--------------------~~~~~~~~~g~r~l~~a~~~------------------ 221 (608)
+...+++||+++.++++|. +.+++++.+|+|||++|++.
T Consensus 508 ~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~ 587 (1034)
T 3ixz_A 508 PRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMN 587 (1034)
T ss_pred CCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhh
Confidence 2234689999999888764 34567899999999999973
Q ss_pred -CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC--------------------
Q psy16789 222 -NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-------------------- 280 (608)
Q Consensus 222 -~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-------------------- 280 (608)
.|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+..++
T Consensus 588 ~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~ 667 (1034)
T 3ixz_A 588 FPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNR 667 (1034)
T ss_pred ccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccc
Confidence 26799999999999999999999999999999999999999999999999999996543
Q ss_pred ----CccccchhhcccCHHHHHHHhhcc--eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCC
Q psy16789 281 ----GKVLSGDQIDQMTEHQLQQVVNSV--TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQ 354 (608)
Q Consensus 281 ----~~vi~g~~~~~~~~~~~~~~~~~~--~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~ 354 (608)
..+++|.++..++++++.+...+. .+|+|++|+||.++++.+|+.|+.|+|+|||.||++||+.||+|||||.+
T Consensus 668 ~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~n 747 (1034)
T 3ixz_A 668 KDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIA 747 (1034)
T ss_pred cccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCc
Confidence 236788888888888888888765 49999999999999999999999999999999999999999999999989
Q ss_pred CcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhh
Q psy16789 355 GTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGP 434 (608)
Q Consensus 355 ~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 434 (608)
|++.+|++||+++.++++++++.+|++||++|+|+++++.|.+++|+..++..+++.+++.+.|++|+|+||+|+++|.+
T Consensus 748 g~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~ 827 (1034)
T 3ixz_A 748 GSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIF 827 (1034)
T ss_pred cCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhccCCCCccccccCCCCC-CCCCcchHHHHHHHH-HHHHHHHHHHHhhhhccccc--------------------c
Q psy16789 435 PAQSLGVEPVDDDVKIQKPRNV-KEPMITRALVVNVLM-SASIIIVGTLYVFKREMSDN--------------------I 492 (608)
Q Consensus 435 ~~~~l~~~~~~~~~~~~~P~~~-~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------------------~ 492 (608)
|+++|+++||++++|++||+++ +++++++.+++..++ .|++.+++.++.|++.+..+ .
T Consensus 828 palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 907 (1034)
T 3ixz_A 828 PSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQD 907 (1034)
T ss_pred HHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccc
Confidence 9999999999999999999987 688999988877543 46666555554443221100 0
Q ss_pred c----------------ccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhccccccc
Q psy16789 493 V----------------SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQK 556 (608)
Q Consensus 493 ~----------------~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~ 556 (608)
. ....+|++|.+++++|+++.+++|+.+.++|+.++++|++++++++++++++++++|+|+++.
T Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~ 987 (1034)
T 3ixz_A 908 LQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPN 987 (1034)
T ss_pred cccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 0 012579999999999999999999998999999999999999999999999999999999999
Q ss_pred ccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy16789 557 VFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRS 599 (608)
Q Consensus 557 ~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~~~~ 599 (608)
+|++.|+++.+|+++++++++.++++|+.|++.|++++.|.++
T Consensus 988 ~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~~~~ 1030 (1034)
T 3ixz_A 988 IFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSWWDQ 1030 (1034)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhh
Confidence 9999999999999999999999999999999999999888765
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-77 Score=695.99 Aligned_cols=533 Identities=27% Similarity=0.417 Sum_probs=460.3
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--cc-------------------hh---h
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--HR-------------------LL---E 121 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--kg-------------------~~---e 121 (608)
..+...|..++.++...+++.+..++.+.++++|.|||||+|+|++.+..+ .+ .. +
T Consensus 346 ti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (1028)
T 2zxe_A 346 TVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSA 425 (1028)
T ss_dssp HHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHH
T ss_pred HHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHH
Confidence 334444556788899999999999999999999999999999998876532 10 01 2
Q ss_pred ---hhccccceeeecc---------ccCCCccHHHHHHHHHHcCc--cccccccccceeeeCChHHHHHHhHhhhc----
Q psy16789 122 ---VGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGL--YAVNEHYVRLKEYPFSSEQKMMAVRVHKI---- 183 (608)
Q Consensus 122 ---i~~lc~~a~~~~~---------~~~gdp~E~Al~~~~~~~~~--~~~~~~~~~~~~~pF~s~~k~m~v~~~~~---- 183 (608)
+.++||++....+ ...|||+|.||++++++.+. ...+..|+.+.++||+|++|||+++++..
T Consensus 426 l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~ 505 (1028)
T 2zxe_A 426 LSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSE 505 (1028)
T ss_dssp HHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTT
T ss_pred HHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCC
Confidence 5688998876421 35799999999999988632 23456789999999999999999988642
Q ss_pred -CCcCCCCchhHHHHhhhh--------------------hhhHHHhhccCceEEEEEccC-------------------C
Q psy16789 184 -GHNLPSKRDGKMILSQSC--------------------SEYPKFQTLGKGLVAMARGSN-------------------L 223 (608)
Q Consensus 184 -~~~~~~kg~~~~~~~~~~--------------------~~~~~~~~~g~r~l~~a~~~~-------------------e 223 (608)
+..+++||+++.+++.|. +.+++++++|+||+++|+++. |
T Consensus 506 ~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e 585 (1028)
T 2zxe_A 506 SRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPT 585 (1028)
T ss_dssp CCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCC
T ss_pred CcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhh
Confidence 224588999998876543 346789999999999999732 5
Q ss_pred CCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-----------------------
Q psy16789 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH----------------------- 280 (608)
Q Consensus 224 ~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~----------------------- 280 (608)
+|++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++|+...+
T Consensus 586 ~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (1028)
T 2zxe_A 586 TDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDA 665 (1028)
T ss_dssp SSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGC
T ss_pred cCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhcccccc
Confidence 789999999999999999999999999999999999999999999999999998542
Q ss_pred -CccccchhhcccCHHHHHHHhhcce--EEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcH
Q psy16789 281 -GKVLSGDQIDQMTEHQLQQVVNSVT--VFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTD 357 (608)
Q Consensus 281 -~~vi~g~~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~ 357 (608)
..+++|++++.++++++.+...++. +|+|++|+||..+|+.+|+.|+.|+|+|||.||+|||++||+|||||.+|++
T Consensus 666 ~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd 745 (1028)
T 2zxe_A 666 KACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSD 745 (1028)
T ss_dssp CEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCH
T ss_pred ceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCH
Confidence 2467889999899999999888875 9999999999999999999999999999999999999999999999977999
Q ss_pred HHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHh
Q psy16789 358 VCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQ 437 (608)
Q Consensus 358 ~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 437 (608)
.+|++||+++.+++|+++.++|++||++|+|+++++.|.+++|+..++..+++.+++.+.|++++|++|+|+++|.+|++
T Consensus 746 ~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~ 825 (1028)
T 2zxe_A 746 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAI 825 (1028)
T ss_dssp HHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHH
T ss_pred HHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred hhccCCCCccccccCCCCCCC-CCcchHHHHH-HHHHHHHHHHHHHHhhhhccc-----------------c---c----
Q psy16789 438 SLGVEPVDDDVKIQKPRNVKE-PMITRALVVN-VLMSASIIIVGTLYVFKREMS-----------------D---N---- 491 (608)
Q Consensus 438 ~l~~~~~~~~~~~~~P~~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------------~---~---- 491 (608)
++++++|++++|++||++++. ++++++++.. ++..|++++++.++.|++.+. . +
T Consensus 826 al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 905 (1028)
T 2zxe_A 826 SLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVED 905 (1028)
T ss_dssp HGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEEC
T ss_pred HhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhcccccccccc
Confidence 999999999999999998766 9999998877 445666666555444332110 0 0
Q ss_pred --c----------cccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccc
Q psy16789 492 --I----------VSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQ 559 (608)
Q Consensus 492 --~----------~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~ 559 (608)
. .....+|++|.+++++|+++.+++|+.+.++|+.+ ++|++++++++++++++++++|+|+++.+|+
T Consensus 906 ~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~-~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~ 984 (1028)
T 2zxe_A 906 SFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQG-MKNKILIFGLFEETALAAFLSYCPGTDVALR 984 (1028)
T ss_dssp TTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHC-SCCHHHHHHHHHHHHHHHHHHHSTTHHHHTC
T ss_pred ccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccC-CcCHHHHHHHHHHHHHHHHHHHhhhHHhhhc
Confidence 0 00146799999999999999999999888888877 8999999999999999999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy16789 560 TEALTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRS 599 (608)
Q Consensus 560 ~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~~~~ 599 (608)
+.|+++.+|++++++++..++++++.|++.|++++.|.++
T Consensus 985 ~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~~~~~~ 1024 (1028)
T 2zxe_A 985 MYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRSPGGWVEQ 1024 (1028)
T ss_dssp CCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHCTTSHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCcchhHh
Confidence 9999999999999999999999999999999887777765
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-76 Score=686.07 Aligned_cols=525 Identities=29% Similarity=0.460 Sum_probs=459.0
Q ss_pred HHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEcc------c-----------------------
Q psy16789 68 GMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLH------R----------------------- 118 (608)
Q Consensus 68 ~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~k------g----------------------- 118 (608)
+...|..++.++...++..+..++.+.++++|.|||||+|+|++.+..+. +
T Consensus 319 ~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 398 (995)
T 3ar4_A 319 CLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLK 398 (995)
T ss_dssp HHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEE
T ss_pred HHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccc
Confidence 34445567888899999999999999999999999999999987664320 0
Q ss_pred ---------------hhhhhccccceeeecc------ccCCCccHHHHHHHHHHcCc-cc-----------------ccc
Q psy16789 119 ---------------LLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGL-YA-----------------VNE 159 (608)
Q Consensus 119 ---------------~~ei~~lc~~a~~~~~------~~~gdp~E~Al~~~~~~~~~-~~-----------------~~~ 159 (608)
...+.++||++....+ ...|||+|.|+++++++.|. .. .+.
T Consensus 399 ~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~ 478 (995)
T 3ar4_A 399 NDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQ 478 (995)
T ss_dssp TTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhh
Confidence 0014578998765422 24699999999999988765 11 234
Q ss_pred ccccceeeeCChHHHHHHhHhhhcC-------CcCCCCchhHHHHhhhh--------------------hhhHHH--hhc
Q psy16789 160 HYVRLKEYPFSSEQKMMAVRVHKIG-------HNLPSKRDGKMILSQSC--------------------SEYPKF--QTL 210 (608)
Q Consensus 160 ~~~~~~~~pF~s~~k~m~v~~~~~~-------~~~~~kg~~~~~~~~~~--------------------~~~~~~--~~~ 210 (608)
+|++++++||+|+||||+++++.+. ..+++||+++.+++.|. +.++++ +++
T Consensus 479 ~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~ 558 (995)
T 3ar4_A 479 LMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRD 558 (995)
T ss_dssp HEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTT
T ss_pred hCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhc
Confidence 6889999999999999999987432 34589999998887653 345678 899
Q ss_pred cCceEEEEEccC------------------CCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Q psy16789 211 GKGLVAMARGSN------------------LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS 272 (608)
Q Consensus 211 g~r~l~~a~~~~------------------e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~ 272 (608)
|+||+++|||+. |+|++|+|+++++|++|++++++|+.|+++||+++|+|||+..+|.++|+
T Consensus 559 GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~ 638 (995)
T 3ar4_A 559 TLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR 638 (995)
T ss_dssp CCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred cceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHH
Confidence 999999999853 57999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCC----CccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 273 MVGLDTIH----GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 273 ~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
++|+...+ +.+++|++++.++++++.+.+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||++|+++||+|
T Consensus 639 ~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advg 718 (995)
T 3ar4_A 639 RIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIG 718 (995)
T ss_dssp HHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEE
T ss_pred HcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeE
Confidence 99997653 46889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHH
Q psy16789 349 IAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWIN 428 (608)
Q Consensus 349 ia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 428 (608)
|||+ +|++.++++||+++.+++|.++.+++++||++|+|+++++.|.+++|+..++..+++.+++.+.|++|+|++|+|
T Consensus 719 iamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~n 797 (995)
T 3ar4_A 719 IAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVN 797 (995)
T ss_dssp EEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHH
T ss_pred EEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999998888888899999999999999999
Q ss_pred HHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhh-cc-ccc---------------
Q psy16789 429 IIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKR-EM-SDN--------------- 491 (608)
Q Consensus 429 ~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--------------- 491 (608)
+++|.+|+++++++++++++|++||+++++++++++++++++.+|+++.+.++..+.+ .. ..+
T Consensus 798 l~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (995)
T 3ar4_A 798 LVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQC 877 (995)
T ss_dssp HTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSC
T ss_pred HHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccc
Confidence 9999999999999999999999999999999999999999999988876555432211 10 000
Q ss_pred -----cc---------ccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccc
Q psy16789 492 -----IV---------SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKV 557 (608)
Q Consensus 492 -----~~---------~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~ 557 (608)
.. ....+|++|.+++++|+++.+++|+.+.++|+.++|+|++++++++++++++++++|+|+++.+
T Consensus 878 ~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~ 957 (995)
T 3ar4_A 878 TEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMI 957 (995)
T ss_dssp SSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHH
T ss_pred ccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 1235799999999999999999999888888888899999999999999999999999999999
Q ss_pred cccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy16789 558 FQTEALTINDIAFLTALTSTVFFVSEIKKAIERICE 593 (608)
Q Consensus 558 f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~ 593 (608)
|++.|+++.+|+++++++++.+++++++|++.|+++
T Consensus 958 f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 958 FKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYL 993 (995)
T ss_dssp TTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSC
T ss_pred hccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999988764
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-67 Score=600.30 Aligned_cols=503 Identities=19% Similarity=0.252 Sum_probs=404.3
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cchh--h---hhccccceeeeccccC
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRLL--E---VGCVCNNASIIGDSLL 137 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~~--e---i~~lc~~a~~~~~~~~ 137 (608)
..+...|..++.++...+++.+..++.+.++++|.|||||+|+|++.+..+ .|.. + ..++|+... ...
T Consensus 343 ti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~~~~ll~~a~l~~~~~----~~~ 418 (920)
T 1mhs_A 343 TTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRK----KKG 418 (920)
T ss_dssp HHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCCCTHHHHHHHHSCCCS----SCS
T ss_pred HHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCCCHHHHHHHHHHhcCCc----ccC
Confidence 334444556788899999999999999999999999999999998776433 2321 2 334565431 112
Q ss_pred CCccHHHHHHHHHHcCccc-cccccccceeeeCChHHHHHHhHhhhc--CCcCCCCchhHHHHhhh--------------
Q psy16789 138 GQPTEGALLAAGMKFGLYA-VNEHYVRLKEYPFSSEQKMMAVRVHKI--GHNLPSKRDGKMILSQS-------------- 200 (608)
Q Consensus 138 gdp~E~Al~~~~~~~~~~~-~~~~~~~~~~~pF~s~~k~m~v~~~~~--~~~~~~kg~~~~~~~~~-------------- 200 (608)
+||+|.|+++++.+.+... ....|+..+++||+|.+|+|+++++.. ....++||+++.+++.|
T Consensus 419 ~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~ 498 (920)
T 1mhs_A 419 IDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAY 498 (920)
T ss_dssp CCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHH
T ss_pred CChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHH
Confidence 5999999999998765432 345688999999999999999988642 23357899999887754
Q ss_pred hhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC--
Q psy16789 201 CSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT-- 278 (608)
Q Consensus 201 ~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~-- 278 (608)
.+.+++++++|+||+++|++..|++++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..
T Consensus 499 ~~~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~ 578 (920)
T 1mhs_A 499 KNKVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI 578 (920)
T ss_dssp HHHHHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC
T ss_pred HHHHHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc
Confidence 335678999999999999998889999999999999999999999999999999999999999999999999999964
Q ss_pred --CCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc
Q psy16789 279 --IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGT 356 (608)
Q Consensus 279 --~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~ 356 (608)
....+++|+ +.++++++.+.+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||+||||+ +|+
T Consensus 579 ~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gt 655 (920)
T 1mhs_A 579 YNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSS 655 (920)
T ss_dssp CCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSC
T ss_pred cCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-ccc
Confidence 233456665 456677788888889999999999999999999999999999999999999999999999999 899
Q ss_pred HHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHH-HHHhcCCCchhHHHHHHHHHHHhhhh
Q psy16789 357 DVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIAL-ATLLRIPNPLNAMQILWINIIMDGPP 435 (608)
Q Consensus 357 ~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 435 (608)
+.++++||+++.+++|+++.+++++||++|+|+++++.|.++.|+....+..+ ..+++. ++++.|++|+|+++|. |
T Consensus 656 d~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~l~~~~il~~~l~~d~-~ 732 (920)
T 1mhs_A 656 DAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNR--SLNIELVVFIAIFADV-A 732 (920)
T ss_dssp HHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC--CCCHHHHHHHHHHHTT-H
T ss_pred HHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCHHHHHHHHHHHHH-H
Confidence 99999999999999999999999999999999999999999999886433333 334444 4899999999999998 8
Q ss_pred HhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc---cc---ccccccchhhHHHHHHHH
Q psy16789 436 AQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMS---DN---IVSKRDTTMTFTCFVFFD 509 (608)
Q Consensus 436 ~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~t~~f~~lv~~~ 509 (608)
++++++++++.+ ++|++++.+-+ +..+++.|++..++.++.|...+. .+ ......+|++|.+++++|
T Consensus 733 ~lal~~e~~~~~---~~P~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~ 805 (920)
T 1mhs_A 733 TLAIAYDNAPYS---QTPVKWNLPKL----WGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTE 805 (920)
T ss_dssp HHHCCCCCSGGG---GSCCCCCSSSC----SSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHH
T ss_pred hhhhcccCcccc---cCCCCchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHH
Confidence 999999987664 67776654322 222334454444433333322111 11 112356899999999999
Q ss_pred HHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 510 MFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIE 589 (608)
Q Consensus 510 l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~ 589 (608)
+++++++|+.+. +|+ ++ .|+++++++++..++++++.++| +|.+.|+++.+|+++++++++.+++.++.|++.
T Consensus 806 ~~~~~~~R~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~----~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~ 878 (920)
T 1mhs_A 806 NWLIFITRANGP-FWS-SI-PSWQLSGAIFLVDILATCFTIWG----WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYIL 878 (920)
T ss_dssp HHHTTSSSCSSS-CSC-CS-CTHHHHHHHHHHHHHHHHHHSSS----STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCC
T ss_pred HHHHHHhccchh-hhc-Cc-hHHHHHHHHHHHHHHHHHHHHhh----hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998643 444 43 78888888888888777777766 788899999999999999999999999999865
Q ss_pred Hhh
Q psy16789 590 RIC 592 (608)
Q Consensus 590 r~~ 592 (608)
++.
T Consensus 879 ~~~ 881 (920)
T 1mhs_A 879 QDS 881 (920)
T ss_dssp CCC
T ss_pred hhh
Confidence 543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-65 Score=580.45 Aligned_cols=501 Identities=22% Similarity=0.270 Sum_probs=389.1
Q ss_pred HhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE------ccchh-h----hhccccceeeeccccC
Q psy16789 69 MKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF------LHRLL-E----VGCVCNNASIIGDSLL 137 (608)
Q Consensus 69 ~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~------~kg~~-e----i~~lc~~a~~~~~~~~ 137 (608)
...|..++.++...+++.+..++.+.++++|.|||||+|+|++.+.. .+|.. + ..++|+.. ..
T Consensus 297 la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~------~~ 370 (885)
T 3b8c_A 297 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRV------EN 370 (885)
T ss_dssp TTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCS------SS
T ss_pred HHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCC------CC
Confidence 33344677888999999999999999999999999999999887741 12322 2 34556542 24
Q ss_pred CCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhh--cCCcCCCCchhHHHHhhh----------hhhhH
Q psy16789 138 GQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHK--IGHNLPSKRDGKMILSQS----------CSEYP 205 (608)
Q Consensus 138 gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~--~~~~~~~kg~~~~~~~~~----------~~~~~ 205 (608)
+||+|.|+++++.+. ...+..|+.++++||+|.+|+|++++++ +....++||+++.+++.| .+.++
T Consensus 371 ~~p~~~Al~~~~~~~--~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~ 448 (885)
T 3b8c_A 371 QDAIDAAMVGMLADP--KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIID 448 (885)
T ss_dssp CCSHHHHHHHTTCCT--TCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHH
T ss_pred CCchHHHHHHHhhch--hhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHH
Confidence 899999999987642 1234567888999999999999988764 233468999999887654 34567
Q ss_pred HHhhccCceEEEEEcc--------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 206 KFQTLGKGLVAMARGS--------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 206 ~~~~~g~r~l~~a~~~--------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
+++++|+||+++|+++ .|++++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++|+.
T Consensus 449 ~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 449 KYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 528 (885)
T ss_dssp HHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred HHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence 8999999999999983 46789999999999999999999999999999999999999999999999999996
Q ss_pred CC--CCccccchhhcc-cCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCC
Q psy16789 278 TI--HGKVLSGDQIDQ-MTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQ 354 (608)
Q Consensus 278 ~~--~~~vi~g~~~~~-~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~ 354 (608)
.. ...+++|.+++. ++++++++.+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||+||||+ +
T Consensus 529 ~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~ 607 (885)
T 3b8c_A 529 TNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-D 607 (885)
T ss_dssp TCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-S
T ss_pred cccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-C
Confidence 43 245677877765 5666677888899999999999999999999999999999999999999999999999999 8
Q ss_pred CcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhh
Q psy16789 355 GTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGP 434 (608)
Q Consensus 355 ~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 434 (608)
|++.++++||+++.+++++++.+++++||++|+|+++++.|.++.|+..++..+... +..+.|++|+|++|+|++++..
T Consensus 608 gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~-~~~~~~l~p~~il~i~l~~d~~ 686 (885)
T 3b8c_A 608 ATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA-LIWEFDFSAFMVLIIAILNDGT 686 (885)
T ss_dssp SHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHH-SSCSSCSCHHHHHHHHHHHHTT
T ss_pred ccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCcCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987544333333 3566789999999999999997
Q ss_pred hHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccccc------cc------ccccchh-h
Q psy16789 435 PAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDN------IV------SKRDTTM-T 501 (608)
Q Consensus 435 ~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------~~~~~t~-~ 501 (608)
+ ++++++++++. ++| +...+ +.++..+++.|.+..+..+.+|++.+..+ .. ....+|. +
T Consensus 687 ~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 758 (885)
T 3b8c_A 687 I-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVY 758 (885)
T ss_dssp T-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTT
T ss_pred H-HhhcccccCcc---cCC---cchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHH
Confidence 6 78888766442 222 22222 44455556666666666655554433211 00 1123344 4
Q ss_pred HHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChhHHHHHHHHHHHHHHH
Q psy16789 502 FTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFV 581 (608)
Q Consensus 502 f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~ 581 (608)
|..++++|+ +++++|+.+.++|+.+ .|++++..++..++++++++|.+ ..++++.|+++.+|+++++++++.+++
T Consensus 759 ~~~~~~~~~-~~~~~Rs~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~ 833 (885)
T 3b8c_A 759 LQVSIISQA-LIFVTRSRSWSFVERP--GALLMIAFLIAQLIATLIAVYAN--WEFAKIRGIGWGWAGVIWLYSIVTYFP 833 (885)
T ss_dssp TTTSSTTGG-GTTCSSSCTTTSTTST--TTTTSGGGSSTTTTTTSSSSSCC--CCSSCCCCCTTTTHHHHHHHTGGGTHH
T ss_pred HHHHHHHHH-HHHHhccCCCCcccCc--cHHHHHHHHHHHHHHHHHHHhcc--ccccccCCchHHHHHHHHHHHHHHHHH
Confidence 456667775 7899998765555433 44444444444444554444442 234568999999999999999999999
Q ss_pred HHHHHHHHHhh
Q psy16789 582 SEIKKAIERIC 592 (608)
Q Consensus 582 ~~l~K~~~r~~ 592 (608)
.|+.|++.|+.
T Consensus 834 ~e~~k~~~~~~ 844 (885)
T 3b8c_A 834 LDVFKFAIRYI 844 (885)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHHh
Confidence 99999887663
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=334.91 Aligned_cols=289 Identities=25% Similarity=0.331 Sum_probs=235.7
Q ss_pred chhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--cchhh--hhccccceeeeccccCCCccHHHHHHH
Q psy16789 73 LYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--HRLLE--VGCVCNNASIIGDSLLGQPTEGALLAA 148 (608)
Q Consensus 73 ~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--kg~~e--i~~lc~~a~~~~~~~~gdp~E~Al~~~ 148 (608)
..++.++...++.....++.+.++++|.|||||+|++++.+..+ .|..+ .+.++... .....+|++.|++++
T Consensus 398 ~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~l~~aa~l----e~~s~hPla~Aiv~~ 473 (736)
T 3rfu_A 398 VGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFVEDNALALAAAL----EHQSEHPLANAIVHA 473 (736)
T ss_dssp HHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSCHHHHHHHHHHH----HHSSCCHHHHHHHHH
T ss_pred HHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCCHHHHHHHHHHH----hhcCCChHHHHHHHH
Confidence 34667888899999999999999999999999999998877554 23222 44333221 123478999999999
Q ss_pred HHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHh------hhhhhhHHHhhccCceEEEEEccC
Q psy16789 149 GMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILS------QSCSEYPKFQTLGKGLVAMARGSN 222 (608)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~------~~~~~~~~~~~~g~r~l~~a~~~~ 222 (608)
+++.++.. ....+|++..++.... .-+ ......|+.+.+.+ ...+..++++.+|+|++.+|++
T Consensus 474 a~~~~~~~-------~~~~~f~~~~g~gv~~-~~~-g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~G~~vl~va~d-- 542 (736)
T 3rfu_A 474 AKEKGLSL-------GSVEAFEAPTGKGVVG-QVD-GHHVAIGNARLMQEHGGDNAPLFEKADELRGKGASVMFMAVD-- 542 (736)
T ss_dssp HHTTCCCC-------CCCSCCCCCTTTEEEE-CSS-SSCEEEESHHHHHHHCCCCHHHHHHHHHHHHTTCEEEEEEET--
T ss_pred HHhcCCCc-------cCcccccccCCceEEE-EEC-CEEEEEcCHHHHHHcCCChhHHHHHHHHHHhcCCeEEEEEEC--
Confidence 98766532 2234555544332111 101 11123344433222 2445678899999999999985
Q ss_pred CCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhh
Q psy16789 223 LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVN 302 (608)
Q Consensus 223 e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 302 (608)
..++|+++++|++|++++++|++|+++|++++|+|||+..++..+++++|++.
T Consensus 543 ---~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~------------------------ 595 (736)
T 3rfu_A 543 ---GKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK------------------------ 595 (736)
T ss_dssp ---TEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC------------------------
T ss_pred ---CEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE------------------------
Confidence 58999999999999999999999999999999999999999999999999974
Q ss_pred cceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHH
Q psy16789 303 SVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382 (608)
Q Consensus 303 ~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~g 382 (608)
++++++|++|.++++.+|+.|+.|+|+|||.||+||+++||+||||+ +|++.++++||+++.+++++++.+++++|
T Consensus 596 ---v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~s 671 (736)
T 3rfu_A 596 ---VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLS 671 (736)
T ss_dssp ---EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHH
T ss_pred ---EEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhHHHHHHHH
Q psy16789 383 KGIFYNIRNFVRFQLSTSIAALSLI 407 (608)
Q Consensus 383 R~~~~~i~~~~~~~~~~~~~~~~~~ 407 (608)
|++++|+++++.|.+.+|+..+.+.
T Consensus 672 r~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 672 ESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998876543
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=317.17 Aligned_cols=286 Identities=23% Similarity=0.300 Sum_probs=228.4
Q ss_pred CchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccc---hhh-hhccccceeeeccccCCCccHHHHHH
Q psy16789 72 GLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHR---LLE-VGCVCNNASIIGDSLLGQPTEGALLA 147 (608)
Q Consensus 72 g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg---~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~ 147 (608)
+...+.++...++.....++.+.++++|.|||||+|+|++.+..+.. ..+ .+.++..+ .....+|++.|+++
T Consensus 303 ~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~l~~aa~~----e~~s~hPla~Aiv~ 378 (645)
T 3j08_A 303 GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIA----ERRSEHPIAEAIVK 378 (645)
T ss_dssp HHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSCHHHHHHHHHHH----HTTCCSHHHHHHHH
T ss_pred HHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCCHHHHHHHHHHH----hhcCCChhHHHHHH
Confidence 44566788889999999999999999999999999999887755421 122 33322211 12347899999999
Q ss_pred HHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHH-------HHhhhhhhhHHHhhccCceEEEEEc
Q psy16789 148 AGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKM-------ILSQSCSEYPKFQTLGKGLVAMARG 220 (608)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~-------~~~~~~~~~~~~~~~g~r~l~~a~~ 220 (608)
++++.+..... .+.....|-..... .....|+.+. ..++..+..++++.+|+|++.++++
T Consensus 379 ~a~~~g~~~~~--~~~~~~~~g~g~~~-----------~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~ 445 (645)
T 3j08_A 379 KALEHGIELGE--PEKVEVIAGEGVVA-----------DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARN 445 (645)
T ss_dssp HHHHTTCCCCS--CCCCEEETTTEEEE-----------TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCCCEEEEET
T ss_pred HHHhcCCCcCC--ccceEEecCCceEE-----------EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEEC
Confidence 99987764311 01111111100000 0011111111 1123455677889999999999984
Q ss_pred cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHH
Q psy16789 221 SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQV 300 (608)
Q Consensus 221 ~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 300 (608)
+.++|+++++|++|++++++|++|+++|++++|+|||+..++..+++++|+..
T Consensus 446 -----~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------- 498 (645)
T 3j08_A 446 -----GRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------- 498 (645)
T ss_dssp -----TEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------
T ss_pred -----CEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE----------------------
Confidence 69999999999999999999999999999999999999999999999999963
Q ss_pred hhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 301 VNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 301 ~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
++++++|++|.++++.+++. +.|+|+|||.||++|++.||+||+|+ ++++.++++||+++.+++++++.++++
T Consensus 499 -----~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 499 -----VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp -----EECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred -----EEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 88999999999999999988 89999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHHHHHH
Q psy16789 381 EGKGIFYNIRNFVRFQLSTSIAALSLIA 408 (608)
Q Consensus 381 ~gR~~~~~i~~~~~~~~~~~~~~~~~~~ 408 (608)
+||++++|+++++.|.+.+|+..+...+
T Consensus 572 ~~r~~~~~i~~nl~~a~~~N~~~i~la~ 599 (645)
T 3j08_A 572 LSRKTMSKIKQNIFWALIYNVILIPAAA 599 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988655443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-34 Score=319.07 Aligned_cols=287 Identities=23% Similarity=0.293 Sum_probs=229.1
Q ss_pred CchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccc---hhh-hhccccceeeeccccCCCccHHHHHH
Q psy16789 72 GLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHR---LLE-VGCVCNNASIIGDSLLGQPTEGALLA 147 (608)
Q Consensus 72 g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg---~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~ 147 (608)
+...+.++...++.....++.+.++++|.|||||+|+|++.+..+.. ..+ ++.++..+ .....+|++.|+++
T Consensus 381 ~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~l~~aa~~----e~~s~hP~~~Ai~~ 456 (723)
T 3j09_A 381 GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIA----ERRSEHPIAEAIVK 456 (723)
T ss_dssp HHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSCHHHHHHHHHHH----HTTCCSHHHHHHHH
T ss_pred HHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCCHHHHHHHHHHH----hccCCCchhHHHHH
Confidence 34566788889999999999999999999999999999887755421 122 33332211 12347899999999
Q ss_pred HHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHH-------HhhhhhhhHHHhhccCceEEEEEc
Q psy16789 148 AGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMI-------LSQSCSEYPKFQTLGKGLVAMARG 220 (608)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~-------~~~~~~~~~~~~~~g~r~l~~a~~ 220 (608)
++++.+..... .+.....|-..... .....|+...+ .++..+..++++.+|.|++.++++
T Consensus 457 ~a~~~~~~~~~--~~~~~~~~g~g~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~va~~ 523 (723)
T 3j09_A 457 KALEHGIELGE--PEKVEVIAGEGVVA-----------DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARN 523 (723)
T ss_dssp HHHHTTCCCCS--CCCCEEETTTEEEE-----------TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEET
T ss_pred HHHhcCCCcCC--ccceEEecCCceEE-----------EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEEC
Confidence 99987764311 11111111100000 00111211111 123455678889999999999974
Q ss_pred cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHH
Q psy16789 221 SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQV 300 (608)
Q Consensus 221 ~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 300 (608)
++++|+++++|++|++++++|++|+++|++++|+|||+..++..+++++|+..
T Consensus 524 -----~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------- 576 (723)
T 3j09_A 524 -----GRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------- 576 (723)
T ss_dssp -----TEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------
T ss_pred -----CEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE----------------------
Confidence 69999999999999999999999999999999999999999999999999963
Q ss_pred hhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 301 VNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 301 ~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
++++++|++|.++++.+++. +.|+|+|||.||++|++.||+||||+ +|++.++++||+++.+++++++.++++
T Consensus 577 -----~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 577 -----VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp -----EECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred -----EEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 88999999999999999988 89999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHHHHHHH
Q psy16789 381 EGKGIFYNIRNFVRFQLSTSIAALSLIAL 409 (608)
Q Consensus 381 ~gR~~~~~i~~~~~~~~~~~~~~~~~~~~ 409 (608)
+||++++|+++++.|.+.+|+..+.+.+.
T Consensus 650 ~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 678 (723)
T 3j09_A 650 LSRKTMSKIKQNIFWALIYNVILIPAAAG 678 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999886655443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=9.9e-22 Score=195.19 Aligned_cols=255 Identities=20% Similarity=0.320 Sum_probs=183.9
Q ss_pred hhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhhhhccccceeeeccccCCCccHHHHHHHHHHcCc
Q psy16789 75 AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGL 154 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~ei~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~ 154 (608)
+..++...++....-+..+.+.+++.|||||+|++...+..+....+++.+..... .....|...|+.+++++.++
T Consensus 8 ~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~~~~~~l~~~~~~e----~~s~hp~a~ai~~~~~~~g~ 83 (263)
T 2yj3_A 8 KMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFIGDSLSLAYAASVE----ALSSHPIAKAIVKYAKEQGV 83 (263)
Confidence 34456667787788888889999999999999988776654321112333332211 12356888888887766554
Q ss_pred ccc-ccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEee
Q psy16789 155 YAV-NEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVG 233 (608)
Q Consensus 155 ~~~-~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~ 233 (608)
... .++++...-.+... .++.. ...-|. ..+|.+ +.++++ -.+.|.+.
T Consensus 84 ~~~~~~~~~~~~G~g~~~-------~~~~~---~~~~G~---------------~~~~~~-~~~~~~-----~~~~~~~~ 132 (263)
T 2yj3_A 84 KILEVKDFKEISGIGVRG-------KISDK---IIEVKK---------------AENNND-IAVYIN-----GEPIASFN 132 (263)
Confidence 220 01111000000000 00000 000000 012333 333333 36789999
Q ss_pred ecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 234 ICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 234 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
+.|+++|++.++++.|+++|+++.++||++..++..+++++|+.. +|..+.|+
T Consensus 133 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~ 185 (263)
T 2yj3_A 133 ISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPE 185 (263)
Confidence 999999999999999999999999999999999999999999864 44555699
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhh
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNF 392 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~ 392 (608)
+|..+++.++..+..|+|+|||.||+++++.||+|++++ ++.+.+++.||+++.++++..+.++++.+|+++.+|+++
T Consensus 186 ~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 186 DKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999988899999999999999999999999999 788888899999998889999999999999999998864
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=173.47 Aligned_cols=266 Identities=24% Similarity=0.319 Sum_probs=190.8
Q ss_pred chhhhhhcccccccccccccccceeeecCCCCCccccceEEE---Eccchhh-hhccccceeeeccccCCCccHHHHHHH
Q psy16789 73 LYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFF---FLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAA 148 (608)
Q Consensus 73 ~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~---~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~ 148 (608)
-..+.++...++.....+..+.+..++.|++||++.+...+. ...|..+ ++.+|..+ .....+|...|+.++
T Consensus 10 ~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~~~~~~l~~~~~~----e~~s~hp~~~a~~~~ 85 (287)
T 3a1c_A 10 SRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIA----ERRSEHPIAEAIVKK 85 (287)
T ss_dssp ----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSSCHHHHHHHHHHH----TTTCCSHHHHHHHHH
T ss_pred HHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCCCHHHHHHHHHHH----hhcCCCHHHHHHHHH
Confidence 345567777888888888888889999999999997765553 2234222 55555432 234578999999999
Q ss_pred HHHcCccc-cccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHH-------hhhhhhhHHHhhccCceEEEEEc
Q psy16789 149 GMKFGLYA-VNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMIL-------SQSCSEYPKFQTLGKGLVAMARG 220 (608)
Q Consensus 149 ~~~~~~~~-~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~-------~~~~~~~~~~~~~g~r~l~~a~~ 220 (608)
+.+.|+.. ..+.+....-.+... ....+|..+.+- +...+..+.+..+|.+++.+++.
T Consensus 86 ~~~~g~~~~~~~~~~~~~G~~~~~--------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~d 151 (287)
T 3a1c_A 86 ALEHGIELGEPEKVEVIAGEGVVA--------------DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARN 151 (287)
T ss_dssp HHHTTCCCCCCSCEEEETTTEEEE--------------TTEEEECHHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHhcCCCccccccceeecCCCeEE--------------EEEEECCHHHHHhcCCCccHHHHHHHHHHHhCCCeEEEEEEC
Confidence 99887642 111121110011110 000111111000 12334556777889999999986
Q ss_pred cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHH
Q psy16789 221 SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQV 300 (608)
Q Consensus 221 ~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 300 (608)
. .+.|.+..++++++++.++++.|+++|+++.++||++...+..+.+.+|+..
T Consensus 152 ~-----~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------- 204 (287)
T 3a1c_A 152 G-----RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------- 204 (287)
T ss_dssp T-----EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------
T ss_pred C-----EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce----------------------
Confidence 4 7889999999999999999999999999999999999999999999999864
Q ss_pred hhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 301 VNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 301 ~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.|....|..|...++.++.. ..++|+||+.||++|.+.||++++++ ++.+..+..+|+++.++++..+.++++
T Consensus 205 -----~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 205 -----VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp -----EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred -----eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 34445588999999999888 88999999999999999999999998 666667788999998889999999999
Q ss_pred HHHHHHHhhh
Q psy16789 381 EGKGIFYNIR 390 (608)
Q Consensus 381 ~gR~~~~~i~ 390 (608)
.+|+++.+|+
T Consensus 278 ~~~~~~~~i~ 287 (287)
T 3a1c_A 278 LSRKTMSKIK 287 (287)
T ss_dssp TTC-------
T ss_pred HHHHHHHhhC
Confidence 9999988874
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.1e-18 Score=155.00 Aligned_cols=137 Identities=16% Similarity=0.177 Sum_probs=107.7
Q ss_pred HHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc
Q psy16789 37 TLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL 116 (608)
Q Consensus 37 ~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~ 116 (608)
++|..+.+|+.... -.|||||.|++.++...+....+++|+++.++||+|+||+|++++...+| ..++++
T Consensus 17 ~vl~~a~L~s~~~~----~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g------~~~l~~ 86 (170)
T 3gwi_A 17 RVLHSAWLNSHYQT----GLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTE------HHQLVC 86 (170)
T ss_dssp HHHHHHHHHHHHCC----SCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSS------EEEEEE
T ss_pred HHHHHHHHcCCCCC----CCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCC------CEEEEE
Confidence 67888889875331 24899999999987665555678899999999999999999999976443 367899
Q ss_pred cchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHH
Q psy16789 117 HRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKM 195 (608)
Q Consensus 117 kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~ 195 (608)
||++| ++.+|+... ......|++.+.|....
T Consensus 87 KGApE~IL~~C~~~~-------------------------------~~g~~~~l~~~~~~~i~----------------- 118 (170)
T 3gwi_A 87 KGALQEILNVCSQVR-------------------------------HNGEIVPLDDIMLRKIK----------------- 118 (170)
T ss_dssp EECHHHHHTTEEEEE-------------------------------ETTEEEECCHHHHHHHH-----------------
T ss_pred cCCcHHHHHHhHHHh-------------------------------cCCCcccCCHHHHHHHH-----------------
Confidence 99999 999997621 12345688876654322
Q ss_pred HHhhhhhhhHHHhhccCceEEEEEcc-----------CCCCceEEEEeeecCC
Q psy16789 196 ILSQSCSEYPKFQTLGKGLVAMARGS-----------NLQDLCYMGLVGICDP 237 (608)
Q Consensus 196 ~~~~~~~~~~~~~~~g~r~l~~a~~~-----------~e~~l~~~G~~~~~d~ 237 (608)
+.+++|+++|+|||++|+|+ .|+||+|+|++|+-|.
T Consensus 119 ------~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 119 ------RVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp ------HHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred ------HHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 37789999999999999983 3799999999999885
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.8e-16 Score=155.23 Aligned_cols=162 Identities=35% Similarity=0.539 Sum_probs=134.6
Q ss_pred hhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc
Q psy16789 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK 282 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 282 (608)
....+...+.+.+.+++.. .++|.+.+.+++++++.++++.|++.|+++.++||++...+..+.+.+|+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---- 185 (280)
T 3skx_A 115 SVEKLKQQGKTVVFILKNG-----EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD---- 185 (280)
T ss_dssp THHHHHTTTCEEEEEEETT-----EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----
T ss_pred HHHHHHhCCCeEEEEEECC-----EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh----
Confidence 4456677788888777653 7889999999999999999999999999999999999999999999999865
Q ss_pred cccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhc
Q psy16789 283 VLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEA 362 (608)
Q Consensus 283 vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ 362 (608)
.|..+.|.+|...++.+.+.. .++|+||+.||++|++.||+|++|+ ++.+..++.
T Consensus 186 -----------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~ 240 (280)
T 3skx_A 186 -----------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVET 240 (280)
T ss_dssp -----------------------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCS
T ss_pred -----------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEec-CCcHHHHhh
Confidence 455566888998888888765 5699999999999999999999999 888889999
Q ss_pred cCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhh
Q psy16789 363 ADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLS 398 (608)
Q Consensus 363 ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~ 398 (608)
||+++..++++++.++++.+|+.+.++++++.|.+.
T Consensus 241 a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 241 ADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred CCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999988877653
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-17 Score=167.18 Aligned_cols=145 Identities=15% Similarity=0.139 Sum_probs=112.5
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHh--hcceEEEEeCc
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV--NSVTVFYRVTP 312 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~--~~~~v~~r~~p 312 (608)
.+++|++++++++.|+++|++++|+||+...++.++++++|+...+..+... .+.. +++.+...+ .....+++..|
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n-~l~~-~~~~~~~~~~~~~i~~~~k~~~ 216 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSN-FMDF-DENGVLKGFKGELIHVFNKHDG 216 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEE-CEEE-CTTSBEEEECSSCCCTTCHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEee-eEEE-cccceeEeccccccchhhcccH
Confidence 4789999999999999999999999999999999999999997654333211 1110 000000000 01224555667
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcCcHHHHH---hCCeeEEeCC------CCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 313 RHKLTIVKAFQANGVIVGMTGDGVNDGVALK---KADIGIAMGK------QGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~---~A~vgia~~~------~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.+|...+..+++.+..|+|+|||.||+||++ .||+||+||. ++.+.+++++|+|+.++++..++.+|.+
T Consensus 217 ~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il~ 294 (297)
T 4fe3_A 217 ALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSILQ 294 (297)
T ss_dssp HHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHHH
T ss_pred HHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHHH
Confidence 8888888889989999999999999999955 8999999983 5677889999999999999999988753
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.38 E-value=6e-13 Score=124.82 Aligned_cols=126 Identities=17% Similarity=0.231 Sum_probs=104.2
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 324 (608)
+++.|+++|+++.++||++...+..+++.+|+.... .. ...|.+.++.+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f---------------------------~~--~~~K~~~~~~~~~ 104 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLF---------------------------QG--REDKLVVLDKLLA 104 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEE---------------------------CS--CSCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHh---------------------------cC--cCChHHHHHHHHH
Confidence 999999999999999999999999999999996522 11 2556666666554
Q ss_pred C----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCc----chHHHHHHHHHHHHHhhhhhhhhh
Q psy16789 325 N----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDF----NTIIAAIEEGKGIFYNIRNFVRFQ 396 (608)
Q Consensus 325 ~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~----~~i~~~i~~gR~~~~~i~~~~~~~ 396 (608)
. ...++|+||+.||++|++.||++++++ ++.+.+++.||+++.+++. ..+.+.+...|..+.++++.+.|.
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~ 183 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEG 183 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTT
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhcc
Confidence 3 467999999999999999999999998 8899999999999987654 446677788999999999999988
Q ss_pred hhhH
Q psy16789 397 LSTS 400 (608)
Q Consensus 397 ~~~~ 400 (608)
+..|
T Consensus 184 ~~~~ 187 (189)
T 3mn1_A 184 HHHH 187 (189)
T ss_dssp C---
T ss_pred cccc
Confidence 7765
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.4e-11 Score=119.07 Aligned_cols=146 Identities=14% Similarity=0.139 Sum_probs=107.4
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----C-Cccc--cchhh-cc---------------
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----H-GKVL--SGDQI-DQ--------------- 291 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~-~~vi--~g~~~-~~--------------- 291 (608)
+..+.+++.++|++|+++|++++++|||+...+..+++++|+..+ + ..+. +++.+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999998642 1 1111 12211 00
Q ss_pred ----------------------cCHHHHHHHhh--cceEE-----EEeCc--hhHHHHHHHHHHC-C---CEEEEEcCCc
Q psy16789 292 ----------------------MTEHQLQQVVN--SVTVF-----YRVTP--RHKLTIVKAFQAN-G---VIVGMTGDGV 336 (608)
Q Consensus 292 ----------------------~~~~~~~~~~~--~~~v~-----~r~~p--~~K~~~v~~l~~~-g---~~v~~~GDg~ 336 (608)
.+.+++.+... .+.+. ....| .+|...++.+.+. | ..++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 01222222221 12222 23334 5899888877654 3 4699999999
Q ss_pred CcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 337 NDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 337 ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
||.+|++.|++|++|+ ++.+.+++.||+++.+++.+++.+++++
T Consensus 180 nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 9999999999999998 8999999999999999899999988853
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-11 Score=126.06 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=108.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-----eC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-----VT 311 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-----~~ 311 (608)
++.+++.+.++.|+++|+++.++||+....+..+.+.+|+.......+.-.+- .+..+ ..
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~---------------~~tg~~~~~~~~ 242 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG---------------KLTGQVLGEVVS 242 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------EEEEEEESCCCC
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------eeeeeecccccC
Confidence 67899999999999999999999999999999999999996432211100000 00000 11
Q ss_pred chhHHHHHHHHH----HCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHH
Q psy16789 312 PRHKLTIVKAFQ----ANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFY 387 (608)
Q Consensus 312 p~~K~~~v~~l~----~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~ 387 (608)
+..|.++++.+. -....++++|||.||++|++.||+|++| ++.+..++.||+++..+++.++..+++.......
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~ 320 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQ 320 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhh
Confidence 234555544433 3346799999999999999999999999 6889999999999999999999999988877777
Q ss_pred hhhhhhhhhhhhH
Q psy16789 388 NIRNFVRFQLSTS 400 (608)
Q Consensus 388 ~i~~~~~~~~~~~ 400 (608)
+++.++.+.+..|
T Consensus 321 r~~~~~~~~~~~~ 333 (335)
T 3n28_A 321 KLSWKSKEGHHHH 333 (335)
T ss_dssp CCCCC--------
T ss_pred hhccccccccccc
Confidence 8888888776654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=3e-11 Score=112.18 Aligned_cols=130 Identities=15% Similarity=0.131 Sum_probs=101.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.++..++|+.|+++|++++++||++...+..+++.+|+... +. ....|..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~---------------------------~~--~~k~k~~ 86 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF---------------------------FL--GKLEKET 86 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE---------------------------EE--SCSCHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee---------------------------ec--CCCCcHH
Confidence 446778999999999999999999999999999999998642 11 1245666
Q ss_pred HHHHHHH-CC---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHH-HHHH---HHHHHHHhh
Q psy16789 318 IVKAFQA-NG---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTII-AAIE---EGKGIFYNI 389 (608)
Q Consensus 318 ~v~~l~~-~g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~-~~i~---~gR~~~~~i 389 (608)
.++.+.+ .| ..++++||+.||++|++.|+++++++ ++.+.+++.||+++.+++..++. ++++ ..|..+.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~ 165 (180)
T 1k1e_A 87 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVF 165 (180)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhh
Confidence 6655443 24 67999999999999999999999998 88899999999999988888877 4443 345556666
Q ss_pred hhhhhhhh
Q psy16789 390 RNFVRFQL 397 (608)
Q Consensus 390 ~~~~~~~~ 397 (608)
+..+.|..
T Consensus 166 ~~~~~~~~ 173 (180)
T 1k1e_A 166 DTAQGFLK 173 (180)
T ss_dssp HCHHHHHH
T ss_pred hhccchhh
Confidence 55554443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-10 Score=116.78 Aligned_cols=68 Identities=22% Similarity=0.230 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..|...++.+.+. | ..++++||+.||.+|++.|++|++|+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 3577777766543 3 46999999999999999999999999 9999999999999999999999999964
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.6e-10 Score=115.03 Aligned_cols=67 Identities=36% Similarity=0.459 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ |+.+.+|++||+++.+++.+++.++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 677777766543 3 45999999999999999999999999 9999999999999999999999999864
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=6.9e-11 Score=117.80 Aligned_cols=145 Identities=26% Similarity=0.309 Sum_probs=90.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC---------------Cccccchhhcc---------
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH---------------GKVLSGDQIDQ--------- 291 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~---------------~~vi~g~~~~~--------- 291 (608)
..+.+.+.+++++++++|++++++||++...+..+.+.+|+..+. ..++....+..
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAW 100 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 347899999999999999999999999999999999999986411 11110000000
Q ss_pred ----------------------------------------------------------cCHHHHHHHhhc--------ce
Q psy16789 292 ----------------------------------------------------------MTEHQLQQVVNS--------VT 305 (608)
Q Consensus 292 ----------------------------------------------------------~~~~~~~~~~~~--------~~ 305 (608)
.+.+.+...... ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 101 ARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 001111111111 11
Q ss_pred E------EEEeCc--hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcc
Q psy16789 306 V------FYRVTP--RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFN 373 (608)
Q Consensus 306 v------~~r~~p--~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~ 373 (608)
+ +....| ..|...++.+.+. | ..++++||+.||.+|++.|++|++|+ |+.+.+|+.||+++.+++.+
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~ 259 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAEN 259 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCcc
Confidence 1 122333 2588777766543 3 46999999999999999999999999 99999999999999999999
Q ss_pred hHHHHHHH
Q psy16789 374 TIIAAIEE 381 (608)
Q Consensus 374 ~i~~~i~~ 381 (608)
+|.++|++
T Consensus 260 Gv~~~i~~ 267 (279)
T 3mpo_A 260 GVAAAIRK 267 (279)
T ss_dssp CHHHHHC-
T ss_pred HHHHHHHH
Confidence 99998853
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.6e-11 Score=111.69 Aligned_cols=104 Identities=13% Similarity=0.248 Sum_probs=85.6
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
.+|+.|+++|+++.++||++...+..+++++|+... |.. ...|...++.+.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~---------------------------~~~--~k~k~~~~~~~~ 109 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISLI---------------------------YQG--QDDKVQAYYDIC 109 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEE---------------------------ECS--CSSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEE---------------------------eeC--CCCcHHHHHHHH
Confidence 359999999999999999999999999999999742 111 144555555544
Q ss_pred HC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 324 AN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 324 ~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
+. ...++++||+.||++|++.|+++++++ ++.+.+++.||+++.+++-.+++.
T Consensus 110 ~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~ 166 (195)
T 3n07_A 110 QKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVR 166 (195)
T ss_dssp HHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHH
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHH
Confidence 32 457999999999999999999999999 899999999999998887777543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.12 E-value=7e-11 Score=112.44 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=84.7
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 324 (608)
+++.|+++|+++.++||++...+..+++.+|+... |... ..|.+.++.+.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~---------------------------f~~~--k~K~~~l~~~~~ 134 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHL---------------------------YQGQ--SDKLVAYHELLA 134 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEE---------------------------ECSC--SSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchh---------------------------hccc--CChHHHHHHHHH
Confidence 89999999999999999999999999999999652 2222 456666666554
Q ss_pred C----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch
Q psy16789 325 N----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT 374 (608)
Q Consensus 325 ~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~ 374 (608)
. ...++|+||+.||++|++.|+++++++ ++.+.+++.||+++.+++-.+
T Consensus 135 ~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 135 TLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred HcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 3 567999999999999999999999998 788999999999998876555
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.3e-10 Score=114.35 Aligned_cols=67 Identities=21% Similarity=0.150 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..|+++||+.||.+|++.|++|+||+ |+.+.+|+.||++..+++.+++.++|++
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 588777776543 4 45999999999999999999999999 9999999999999999999999998864
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.12 E-value=7.2e-11 Score=110.71 Aligned_cols=122 Identities=13% Similarity=0.090 Sum_probs=91.6
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 324 (608)
+++.|+++|+++.++||++...+..+++.+|+......+ ...|+....+.+.++-
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~-------------------------kpk~~~~~~~~~~~~~ 108 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ-------------------------VDKRSAYQHLKKTLGL 108 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC-------------------------SSCHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC-------------------------CChHHHHHHHHHHhCC
Confidence 499999999999999999999999999999997521110 0112233344444444
Q ss_pred CCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHH----HHHHHHHHHHhhhhh
Q psy16789 325 NGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA----AIEEGKGIFYNIRNF 392 (608)
Q Consensus 325 ~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~----~i~~gR~~~~~i~~~ 392 (608)
....++|+||+.||++|++.|+++++++ ++.+.+++.||+++.+++..+++. .+...|..+.++.+.
T Consensus 109 ~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~ 179 (191)
T 3n1u_A 109 NDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITG 179 (191)
T ss_dssp CGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHH
Confidence 4567999999999999999999999998 888999999999999888777554 344455555544433
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-10 Score=114.53 Aligned_cols=145 Identities=18% Similarity=0.204 Sum_probs=102.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC------------CCccccchh---------------
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI------------HGKVLSGDQ--------------- 288 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~------------~~~vi~g~~--------------- 288 (608)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+... .+.++....
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 45788999999999999999999999999999999999987521 000000000
Q ss_pred --------------------------------------hcc-------------cCHHHHH-------HHhhc-ceE---
Q psy16789 289 --------------------------------------IDQ-------------MTEHQLQ-------QVVNS-VTV--- 306 (608)
Q Consensus 289 --------------------------------------~~~-------------~~~~~~~-------~~~~~-~~v--- 306 (608)
+.. .+.+.+. +.+.. ..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 000 0112111 11111 111
Q ss_pred ---EEEeCc--hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCE--EEecCCcchH
Q psy16789 307 ---FYRVTP--RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADM--ILVDDDFNTI 375 (608)
Q Consensus 307 ---~~r~~p--~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~--v~~~~~~~~i 375 (608)
+....| ..|...++.+.+. | ..++++||+.||.+|++.|++|+||+ |+.+.+|++||+ ++.+++.+||
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchH
Confidence 122333 3588777776543 4 46999999999999999999999999 999999999984 7788899999
Q ss_pred HHHHHH
Q psy16789 376 IAAIEE 381 (608)
Q Consensus 376 ~~~i~~ 381 (608)
.++|++
T Consensus 276 a~~i~~ 281 (285)
T 3pgv_A 276 PRYLRK 281 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998864
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.2e-10 Score=106.42 Aligned_cols=101 Identities=20% Similarity=0.212 Sum_probs=82.0
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHH--HcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHH
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIAS--MVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKA 321 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~--~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~ 321 (608)
.+|+.|+++|+++.++||+ ..+..+++ .+|+. . + ..+.+|...++.
T Consensus 43 ~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~-------------------------~g~~~K~~~l~~ 90 (168)
T 3ewi_A 43 IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----E-------------------------VSVSDKLATVDE 90 (168)
T ss_dssp HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----E-------------------------CSCSCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----E-------------------------ECCCChHHHHHH
Confidence 3899999999999999999 67788888 55653 1 1 113467776666
Q ss_pred HHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 322 FQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 322 l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
+.+. ...++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++-++++.
T Consensus 91 ~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G~~~ 149 (168)
T 3ewi_A 91 WRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRGAIR 149 (168)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTTHHH
T ss_pred HHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCccHHH
Confidence 5543 356999999999999999999999998 999999999999999888787443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.9e-10 Score=104.24 Aligned_cols=105 Identities=21% Similarity=0.222 Sum_probs=87.9
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 324 (608)
+++.|+++|+++.++||++...+..+++.+|+. ++.+ ...|.+.++.+.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~~~~-------------------------~~~k~~~l~~~~~ 96 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----VLHG-------------------------IDRKDLALKQWCE 96 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----EEES-------------------------CSCHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----eEeC-------------------------CCChHHHHHHHHH
Confidence 899999999999999999999999999999986 1111 2456666665544
Q ss_pred C----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 325 N----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 325 ~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
. ...++++||+.||++|++.|+++++++ ++.+..++.||+++.+++..++...+.
T Consensus 97 ~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 97 EQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 3 367999999999999999999999998 788999999999999888888766553
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.06 E-value=6.3e-10 Score=110.31 Aligned_cols=67 Identities=30% Similarity=0.264 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. ...++++||+.||.+|++.|++|++|+ |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 577777665543 356999999999999999999999999 9999999999999999999999999864
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=4.5e-10 Score=111.10 Aligned_cols=68 Identities=29% Similarity=0.352 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..|...++.+.+. | ..++++||+.||.+|++.|++|++|+ |+.+.+|++||+++.+++.+|+.++|++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 3687777766543 3 45999999999999999999999999 9999999999999999999999999864
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.04 E-value=6.5e-10 Score=109.35 Aligned_cols=67 Identities=25% Similarity=0.276 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. ...++++||+.||.+|++.|++|++|+ |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 566666655543 346999999999999999999999998 9999999999999999999999998864
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.9e-07 Score=109.21 Aligned_cols=97 Identities=21% Similarity=0.208 Sum_probs=77.7
Q ss_pred CchHHHHHHHHhhhhhceeeeCC---------ccccCchHHHHHHHHHhcCc--hhhhhhcccccccccccccccceeee
Q psy16789 31 SKPETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGL--YAVNEHYVRLKEYPFSSEQKMMAVRC 99 (608)
Q Consensus 31 ~~~~~~~ll~~~~l~n~a~~~~~---------~~~G~pte~All~~~~~~g~--~~~~~~~~~v~~~pF~s~~k~m~v~~ 99 (608)
.++...++++++++||++.+..+ ...|||+|.|++.++.+.+. ...+++++++.++||+|+||+|++++
T Consensus 424 ~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~ 503 (1034)
T 3ixz_A 424 SSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIH 503 (1034)
T ss_pred CCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEE
Confidence 34567789999999999886532 35799999999999998765 46678899999999999999999887
Q ss_pred cCCCCCccccceEEEEccchhh-hhcccccee
Q psy16789 100 IPKEGSSCDVDTRFFFLHRLLE-VGCVCNNAS 130 (608)
Q Consensus 100 ~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~ 130 (608)
...++. ++..++++||++| ++..|+...
T Consensus 504 ~~~~~~---~~~~~l~~KGApe~il~~c~~~~ 532 (1034)
T 3ixz_A 504 TLEDPR---DPRHVLVMKGAPERVLERCSSIL 532 (1034)
T ss_pred EecCCC---CccEEEEEeCChHHHHHHhHHhh
Confidence 654321 2457889999999 999998643
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.00 E-value=3.6e-10 Score=115.74 Aligned_cols=163 Identities=16% Similarity=0.224 Sum_probs=109.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-Cccccchh------------------hcccCHHHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQ------------------IDQMTEHQL 297 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~------------------~~~~~~~~~ 297 (608)
++++++.+.++.+++ |+++.++||+....+....+.+++.... ...+..+. +....++++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l 181 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 181 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHHH
Confidence 468999999999999 9999999999977777777777773211 11111010 000000111
Q ss_pred HHHhhcc------eEEE----EeCchhHHHHHHHHHHCC--CEEEEEcCCcCcHHHHHhC----CeeEEeCCCCcHHHHh
Q psy16789 298 QQVVNSV------TVFY----RVTPRHKLTIVKAFQANG--VIVGMTGDGVNDGVALKKA----DIGIAMGKQGTDVCKE 361 (608)
Q Consensus 298 ~~~~~~~------~v~~----r~~p~~K~~~v~~l~~~g--~~v~~~GDg~ND~~al~~A----~vgia~~~~~~~~a~~ 361 (608)
+.+.++ ..+. -..+.+|...++.+.... +.|+++||+.||++|++.| |+||+| ++.+.+|+
T Consensus 182 -~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~ 258 (332)
T 1y8a_A 182 -RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALK 258 (332)
T ss_dssp -HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHT
T ss_pred -HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHh
Confidence 111110 0011 112456888887665432 4599999999999999999 999999 78999999
Q ss_pred ccCEEEecCCcchHHHHH----HHHHHHHHhhhh-------hhhhhhhhHHHHH
Q psy16789 362 AADMILVDDDFNTIIAAI----EEGKGIFYNIRN-------FVRFQLSTSIAAL 404 (608)
Q Consensus 362 ~ad~v~~~~~~~~i~~~i----~~gR~~~~~i~~-------~~~~~~~~~~~~~ 404 (608)
.||+++.+++.+++.++| .+||..+ ++.+ ++.+....|+-.+
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 311 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEV 311 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHH
Confidence 999999999998888775 4677777 6666 5555555555543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.7e-09 Score=109.22 Aligned_cols=68 Identities=25% Similarity=0.218 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..|...++.+.+. | ..++++||+.||.+|++.|++|++|+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 4688777766543 3 45999999999999999999999999 9999999999999999999999999863
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=8.3e-10 Score=100.57 Aligned_cols=106 Identities=19% Similarity=0.183 Sum_probs=86.2
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 324 (608)
+++.|+++|+++.++||++...+..+++.+|+...... ...|.+.++.+.+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~-----------------------------~kpk~~~~~~~~~ 89 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG-----------------------------VVDKLSAAEELCN 89 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS-----------------------------CSCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc-----------------------------cCChHHHHHHHHH
Confidence 89999999999999999999999999999999752211 1344544444333
Q ss_pred ----CCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch-HHHHHH
Q psy16789 325 ----NGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT-IIAAIE 380 (608)
Q Consensus 325 ----~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~-i~~~i~ 380 (608)
....++|+||+.||++|.+.||++++++ ++.+..++.||+++.+++..+ +.++++
T Consensus 90 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 90 ELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 2457999999999999999999999998 899999999999999888777 555553
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.9e-09 Score=102.58 Aligned_cols=131 Identities=22% Similarity=0.213 Sum_probs=98.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcce-EEEE--eCc
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVT-VFYR--VTP 312 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~-v~~r--~~p 312 (608)
-++.+++.+.++.|+++|+++.++|+........+.+.+|+......++..++- ... .++. ...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------~~~~~~~~~~~~~ 140 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------ALNGLVTGHMMFS 140 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT-------------EEEEEEEESCCST
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC-------------EEEeeeccCCCCC
Confidence 347899999999999999999999999999999999999987543333222110 000 0000 124
Q ss_pred hhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 313 RHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 313 ~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..|.++++.+.+. ...++++||+.||++|++.||+++++ ++.+..++.||+++.++++.++..++++
T Consensus 141 k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 141 HSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp THHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 5566666555433 35699999999999999999999999 6788899999999999999999888754
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.93 E-value=7.6e-09 Score=99.94 Aligned_cols=145 Identities=21% Similarity=0.231 Sum_probs=103.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CC-cccc-ch-------------------hh-
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HG-KVLS-GD-------------------QI- 289 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~-~vi~-g~-------------------~~- 289 (608)
..+.+.+.+++++++++|++++++||++...+..+.+.+|+..+ ++ .+.. ++ ..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 34778999999999999999999999999999999999987542 11 1110 10 00
Q ss_pred --c-----------------ccCHHHHHHHhhc----ceEE-----EEeCc--hhHHHHHHHHHHC-C---CEEEEEcCC
Q psy16789 290 --D-----------------QMTEHQLQQVVNS----VTVF-----YRVTP--RHKLTIVKAFQAN-G---VIVGMTGDG 335 (608)
Q Consensus 290 --~-----------------~~~~~~~~~~~~~----~~v~-----~r~~p--~~K~~~v~~l~~~-g---~~v~~~GDg 335 (608)
. ....+.+...... ..+. ....| ..|...++.+.+. | ..++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 0022233322221 2222 22223 3687777766543 3 469999999
Q ss_pred cCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 336 VNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 336 ~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.||.+|++.|+++++|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 99999999999999998 8888889999999988888899988864
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.87 E-value=5.1e-09 Score=110.56 Aligned_cols=135 Identities=24% Similarity=0.280 Sum_probs=104.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-----eC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-----VT 311 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-----~~ 311 (608)
++.+++.+.++.|+++|+++.++||.....+..+++.+|+.......+.-.+ ..+.++ ..
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d---------------g~~tg~~~~~v~~ 320 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVD---------------GTLTGRVVGPIID 320 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEET---------------TEEEEEECSSCCC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeC---------------CEEEeeEccCCCC
Confidence 6889999999999999999999999999999999999999643221110000 001111 12
Q ss_pred chhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHH
Q psy16789 312 PRHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFY 387 (608)
Q Consensus 312 p~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~ 387 (608)
++.|.++++.+.+. | ..++++||+.||.+|++.||+|+++ ++.+..++.||+++..+++.++..++..+|.-+.
T Consensus 321 ~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~ 398 (415)
T 3p96_A 321 RAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIE 398 (415)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHH
T ss_pred CcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHH
Confidence 45666666655443 3 5699999999999999999999999 5788899999999999999999999877776554
Q ss_pred h
Q psy16789 388 N 388 (608)
Q Consensus 388 ~ 388 (608)
+
T Consensus 399 ~ 399 (415)
T 3p96_A 399 A 399 (415)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-08 Score=92.83 Aligned_cols=112 Identities=16% Similarity=0.202 Sum_probs=88.2
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.+++.++++.|+++|+++.++||++...+..+.+.+|+... |.. +..|.+
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~---------------------------~~~--~kp~~~ 87 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI---------------------------YTG--SYKKLE 87 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE---------------------------EEC--C--CHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh---------------------------ccC--CCCCHH
Confidence 357788999999999999999999999999999999998642 111 223333
Q ss_pred HHH-HHHHC---CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHH-HHH
Q psy16789 318 IVK-AFQAN---GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTII-AAI 379 (608)
Q Consensus 318 ~v~-~l~~~---g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~-~~i 379 (608)
.++ .+++. ...++++||+.||.++.+.||+++++. ++.+..++.||+++.+.+..++. +++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~ 153 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVA 153 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHH
Confidence 333 23333 456999999999999999999999987 77888888999999988888877 444
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.85 E-value=1.8e-08 Score=100.42 Aligned_cols=67 Identities=27% Similarity=0.288 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 688777776553 3 46999999999999999999999999 8889999999999998899999998863
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.83 E-value=5.2e-09 Score=100.94 Aligned_cols=129 Identities=25% Similarity=0.380 Sum_probs=96.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+....+.+++++...... ..|+--.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k----------------p~~~~~~ 167 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGK----------------PHPDMAL 167 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCT----------------TSSHHHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCC----------------CCHHHHH
Confidence 467899999999999999999999999999999999999877666666665432211 1122233
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHHHh-ccCEEEecCCcchHHHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVCKE-AADMILVDDDFNTIIAAIEEGK 383 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a~~-~ad~v~~~~~~~~i~~~i~~gR 383 (608)
.+.+.+.-....++++||+.||+.|.+.||+ +++++.+..+..++ .||+++. ++..+.+.++.|+
T Consensus 168 ~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~~ 236 (237)
T 4ex6_A 168 HVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC-
T ss_pred HHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHccC
Confidence 4444444445679999999999999999998 88888444355554 7999885 7888888887654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=9.7e-09 Score=95.85 Aligned_cols=107 Identities=15% Similarity=0.221 Sum_probs=86.0
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
.+++.|+++|+++.++||++...+..+++.+|+... +.. ...|...++.+.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~---------------------------~~~--~kpk~~~~~~~~ 110 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL---------------------------YQG--QSNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE---------------------------ECS--CSCSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee---------------------------ecC--CCCCHHHHHHHH
Confidence 489999999999999999999999999999998642 111 234555555543
Q ss_pred HC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHH-HHHH
Q psy16789 324 AN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTII-AAIE 380 (608)
Q Consensus 324 ~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~-~~i~ 380 (608)
+. | ..++++||+.||+++.+.||++++++ ++.+..++.||+++.+.+..+++ ++++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 32 3 57999999999999999999999998 77788888999999888777777 5554
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.1e-08 Score=96.52 Aligned_cols=128 Identities=25% Similarity=0.291 Sum_probs=88.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-eCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-VTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-~~p~~K 315 (608)
++.+++.++++.++++|+++.++||+....+..+.+.+|+.......+...+ . .. ...+... ..+..|
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~-~~~~~~~~~~~~~K 144 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD--G--------KL-TGDVEGEVLKENAK 144 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET--T--------EE-EEEEECSSCSTTHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEEC--C--------EE-cCCcccCccCCccH
Confidence 4568999999999999999999999999888888888887532111110000 0 00 0000000 123467
Q ss_pred HHHHHHHH-HCC---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 316 LTIVKAFQ-ANG---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 316 ~~~v~~l~-~~g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
...+..+. +.| ..++++||+.||++|++.||++++++ +.+..+..||+++.++++..+..
T Consensus 145 ~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 145 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred HHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 66555443 333 45999999999999999999999997 55677889999998766776543
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.79 E-value=7.3e-09 Score=104.93 Aligned_cols=127 Identities=18% Similarity=0.198 Sum_probs=95.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-----eC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-----VT 311 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-----~~ 311 (608)
++.+++.+.++.|+++|+++.++||.....+..+.+.+|+......++..++- ..-.+ ..
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg---------------~~tg~i~~~~~~ 243 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN---------------VLTDNITLPIMN 243 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------EEEEEECSSCCC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------eeeeeEecccCC
Confidence 37899999999999999999999999999999999999996543322211110 00000 12
Q ss_pred chhHHHHHHHHHH-C---CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 312 PRHKLTIVKAFQA-N---GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 312 p~~K~~~v~~l~~-~---g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
++.|.++++.+.+ . ...++++||+.||++|.+.||+|++++ +.+..++.||.++..+++.++..+++
T Consensus 244 ~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 244 AANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 3455555554433 2 357999999999999999999999994 77888889999998888888877654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.75 E-value=4e-08 Score=97.14 Aligned_cols=66 Identities=20% Similarity=0.297 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.++|+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 687777766543 2 45999999999999999999999999 888999999999999888999998875
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.73 E-value=7.5e-08 Score=112.34 Aligned_cols=98 Identities=23% Similarity=0.305 Sum_probs=74.9
Q ss_pred hHHHHHHHHhhhhhceeeeCC------ccccCchHHHHHHHHHhcCc-h-----------------hhhhhccccccccc
Q psy16789 33 PETGTLLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGL-Y-----------------AVNEHYVRLKEYPF 88 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~------~~~G~pte~All~~~~~~g~-~-----------------~~~~~~~~v~~~pF 88 (608)
+.+.+++.++++||++.+... ...|||+|.||+.++.+.|. . ..++++++++++||
T Consensus 409 ~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF 488 (995)
T 3ar4_A 409 DGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 488 (995)
T ss_dssp HHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeec
Confidence 457788899999999876421 24699999999999988765 1 14567889999999
Q ss_pred ccccccceeeecCCCCCccccceEEEEccchhh-hhccccceee
Q psy16789 89 SSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASI 131 (608)
Q Consensus 89 ~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~ 131 (608)
+|+||+|++++++.+|... .....+++||++| ++.+|+....
T Consensus 489 ~s~rk~msvi~~~~~g~~~-~~~~~~~~KGa~e~il~~c~~~~~ 531 (995)
T 3ar4_A 489 SRDRKSMSVYCSPAKSSRA-AVGNKMFVKGAPEGVIDRCNYVRV 531 (995)
T ss_dssp ETTTTEEEEEEEESSCCSC-SCCCEEEEEECHHHHHHTEEEEEE
T ss_pred CCCCCeeEEEEecCCCCcc-ccceEEEEcCCHHHHHHhcchhhc
Confidence 9999999999976544110 1124788999999 9999976433
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.73 E-value=6.3e-09 Score=97.32 Aligned_cols=119 Identities=27% Similarity=0.401 Sum_probs=88.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.+...+..+ +.+|+......+...+... --....|..|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~k~ 142 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKF---------------QGIRLRFRDKG 142 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEE---------------EEEECCSSCHH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCce---------------ECCcCCccCHH
Confidence 6889999999999999999999999988888878 8888754311111111000 00344567888
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
..++.+ ....++++||+.||++|++.||++++|+ ++.+ .||+++. ++..+.+.++
T Consensus 143 ~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 143 EFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp HHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred HHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 888887 5677999999999999999999999998 5555 8899885 5555665553
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.73 E-value=3.9e-08 Score=97.40 Aligned_cols=67 Identities=25% Similarity=0.284 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 677777766543 3 45999999999999999999999999 8999999999999998889999998863
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.72 E-value=3.1e-08 Score=99.75 Aligned_cols=67 Identities=21% Similarity=0.210 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEe-cCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILV-DDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~-~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+..++.||+++. +++.+++.++|++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 577666665543 3 35999999999999999999999999 888999999999998 8899999998863
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.2e-08 Score=96.22 Aligned_cols=127 Identities=19% Similarity=0.207 Sum_probs=92.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC--CccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH--GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..+++.+. .... ..|+-
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~k----------------p~~~~ 132 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APPK----------------PHPGG 132 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCCT----------------TSSHH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCCC----------------CCHHH
Confidence 35689999999999999999999999999999999999987654 33443322 1100 01211
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHH
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGK 383 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR 383 (608)
-..+.+.+.-....++++||+.||+.|.+.||+ +|+|+ ++.+..++.||+++. ++..+...++..+
T Consensus 133 ~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~ 199 (205)
T 3m9l_A 133 LLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhcc
Confidence 222333333234569999999999999999999 99998 777777888999885 7777777776544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-08 Score=96.94 Aligned_cols=137 Identities=16% Similarity=0.191 Sum_probs=93.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCC--CCCC-------Ccc------ccchhhc-----------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL--DTIH-------GKV------LSGDQID----------- 290 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi--~~~~-------~~v------i~g~~~~----------- 290 (608)
.+.+.+.++|++|+++| +++++|||+...+..+.+.+ . ...+ +.+ +....++
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57789999999999999 99999999999988887665 2 0011 111 1000000
Q ss_pred -----------------------ccCHH---HHHHHh---hcceE-----EEEeCch--hHHHHHHHHHHCCCEEEEEcC
Q psy16789 291 -----------------------QMTEH---QLQQVV---NSVTV-----FYRVTPR--HKLTIVKAFQANGVIVGMTGD 334 (608)
Q Consensus 291 -----------------------~~~~~---~~~~~~---~~~~v-----~~r~~p~--~K~~~v~~l~~~g~~v~~~GD 334 (608)
...++ ++.+.+ ..+.+ +....|. +|...++.+.+.-. |+++||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD 179 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAGD 179 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEES
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeC
Confidence 00011 111111 12222 1233343 79988888877633 899999
Q ss_pred CcCcHHHHHhC--CeeEEeCCCCcHHHHhccCEEEec-CCcchHHHHHHH
Q psy16789 335 GVNDGVALKKA--DIGIAMGKQGTDVCKEAADMILVD-DDFNTIIAAIEE 381 (608)
Q Consensus 335 g~ND~~al~~A--~vgia~~~~~~~~a~~~ad~v~~~-~~~~~i~~~i~~ 381 (608)
+.||.+||+.| ++||+|+ |+ ++.||+++.+ ++.+++.++|++
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 99999999999 9999999 76 6789999887 778888888854
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.71 E-value=9.1e-08 Score=95.60 Aligned_cols=67 Identities=24% Similarity=0.338 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
+|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+|+.++|++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 455555555443 3 35999999999999999999999998 8899999999999999999999998863
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.5e-10 Score=104.23 Aligned_cols=103 Identities=22% Similarity=0.249 Sum_probs=80.3
Q ss_pred cCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhc--CCcCCCCchhHHHHhhhhhhhHHHhhccCc
Q psy16789 136 LLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKI--GHNLPSKRDGKMILSQSCSEYPKFQTLGKG 213 (608)
Q Consensus 136 ~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~--~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r 213 (608)
..+||+|.|+++++...+....+..|+++.++||||++|||+++++.. ...+++|||++.+++.|..... .|
T Consensus 31 ~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~----~g-- 104 (170)
T 3gwi_A 31 GLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRH----NG-- 104 (170)
T ss_dssp SCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEE----TT--
T ss_pred CCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhc----CC--
Confidence 458999999999987655444567899999999999999999998753 2346999999999998864321 11
Q ss_pred eEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEc
Q psy16789 214 LVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVT 260 (608)
Q Consensus 214 ~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~T 260 (608)
+...+.+..|+.+.+.++.+.+.|.||..+.
T Consensus 105 ----------------~~~~l~~~~~~~i~~~~~~la~~GlRvLavA 135 (170)
T 3gwi_A 105 ----------------EIVPLDDIMLRKIKRVTDTLNRQGLRVVAVA 135 (170)
T ss_dssp ----------------EEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----------------CcccCCHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 1234556667888999999999999998764
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=8.6e-08 Score=94.16 Aligned_cols=65 Identities=18% Similarity=0.157 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHC-C-----CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G-----VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g-----~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..|...++.+.+. | ..++++||+.||.+|++.|++|++|+ |+.+ . .++++..+++-+++.+++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 5788888877655 4 67999999999999999999999999 8777 4 78899988888998888853
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.66 E-value=7.4e-08 Score=92.47 Aligned_cols=124 Identities=15% Similarity=0.095 Sum_probs=86.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.+++.+.++.|++.|+++.++|+... +..+.+.+|+......++++++.... ...|+--..
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~----------------Kp~~~~~~~ 154 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKG----------------KPDPDIFLT 154 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC-------------------------CCHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCC----------------CCChHHHHH
Confidence 679999999999999999999999754 67788889987766666655443211 112333334
Q ss_pred HHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 318 IVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 318 ~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
+.+.+.-....++++||+.||+.|.+.||+++++. +..+..+ .||+++.+.+...+..+++.
T Consensus 155 ~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 155 AAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp HHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHHHH
T ss_pred HHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 55555544577999999999999999999999998 6656666 89999987776666666643
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.65 E-value=3.5e-08 Score=94.24 Aligned_cols=123 Identities=15% Similarity=0.186 Sum_probs=91.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+......+++++.... ...|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------------~kp~ 144 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGK--------------------LSTK 144 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSS--------------------SCSH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCC--------------------CCCC
Confidence 35679999999999999999999999999999999999999766555555544322 2223
Q ss_pred HHHHH----HHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHH--HhccCEEEecCCcchHHHHHHH
Q psy16789 316 LTIVK----AFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVC--KEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 316 ~~~v~----~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a--~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.++++ .+.-....++++||+.||+.|.+.||+ +++++ ++.... +..||+++. ++..+.+++..
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 33333 333334579999999999999999998 88877 443332 578999985 67777777653
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.64 E-value=2e-07 Score=87.83 Aligned_cols=128 Identities=17% Similarity=0.128 Sum_probs=94.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|+++ +++.++|+.+...+..+.+.+|+.... +.+..+.+... ...-...|+.|
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~-------------~~~~~p~p~~~ 134 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-------------VGYQLRQKDPK 134 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCE-------------EEEECCSSSHH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceE-------------EeeecCCCchH
Confidence 5689999999999999 999999999999999999999997543 22222222100 00001457889
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
..+++.+...+..++++||+.||++|.+.||+++++. +.+..++.++.++..+++..+.+.++
T Consensus 135 ~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 135 RQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES--CCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC--CcHHHHHHHhhhccccchHHHHHHHH
Confidence 9999999888899999999999999999999999985 34444544443322357777776663
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.63 E-value=2.9e-08 Score=94.25 Aligned_cols=123 Identities=11% Similarity=0.026 Sum_probs=87.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++.|+++.++|++ .....+.+.+|+......++.++...... ..|+--.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------p~~~~~~ 152 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASK----------------PAPDIFI 152 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCT----------------TSSHHHH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCC----------------CChHHHH
Confidence 35689999999999999999999998 44566777788876555555554432111 0122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.+.+.-....++++||+.||++|++.||++++|. ++.+..+ .||+++.+.+..++..++
T Consensus 153 ~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 153 AAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred HHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHH
Confidence 333333333456999999999999999999999998 7777777 899999877766666655
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-07 Score=93.62 Aligned_cols=67 Identities=15% Similarity=0.016 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHC-C----CE--EEEEcCCcCcHHHHHhCCeeEEeCCCCc---HHHHhc--cC-EEEecCCcchHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G----VI--VGMTGDGVNDGVALKKADIGIAMGKQGT---DVCKEA--AD-MILVDDDFNTIIAAIE 380 (608)
Q Consensus 314 ~K~~~v~~l~~~-g----~~--v~~~GDg~ND~~al~~A~vgia~~~~~~---~~a~~~--ad-~v~~~~~~~~i~~~i~ 380 (608)
.|...++.+.+. | .. ++++||+.||.+|++.|++|++|+ ++. +..++. || +++.+++.+++.++|+
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 577666655432 2 34 999999999999999999999999 776 555543 78 8888889999998885
Q ss_pred H
Q psy16789 381 E 381 (608)
Q Consensus 381 ~ 381 (608)
+
T Consensus 268 ~ 268 (275)
T 1xvi_A 268 H 268 (275)
T ss_dssp -
T ss_pred H
Confidence 3
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.58 E-value=1e-07 Score=90.59 Aligned_cols=116 Identities=19% Similarity=0.195 Sum_probs=84.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++.|+++.++|+..........+..|+......++.++...... ..|.--.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~k----------------p~~~~~~ 157 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSK----------------PHPQVYL 157 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCT----------------TSTHHHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCC----------------CChHHHH
Confidence 456899999999999999999999999888888888888876544444443321100 0122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe----CCCCcHHHHhccCEEEec
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM----GKQGTDVCKEAADMILVD 369 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~----~~~~~~~a~~~ad~v~~~ 369 (608)
.+.+.+.-....++++||+.||++|++.||+++++ + ++.+..+..||+++.+
T Consensus 158 ~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~ 213 (226)
T 1te2_A 158 DCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSS 213 (226)
T ss_dssp HHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSC
T ss_pred HHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECC
Confidence 33444443446799999999999999999999998 4 4455567889998863
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.57 E-value=6.1e-08 Score=92.84 Aligned_cols=127 Identities=21% Similarity=0.194 Sum_probs=90.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++.|+++.++|+........+.+..|+......++.++...... ..|+--.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k----------------p~~~~~~ 154 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGK----------------PDPDLFL 154 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCT----------------TSTHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCC----------------CChHHHH
Confidence 356899999999999999999999999999999999999987666666655442211 0111111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHHHhc-cCEEEecCCcchHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVCKEA-ADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a~~~-ad~v~~~~~~~~i~~~i~~ 381 (608)
.+.+.+.-....++++||+.||+.|.+.||+ +++++.+..+..++. ||+++. ++..+.+.++.
T Consensus 155 ~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~ 221 (233)
T 3s6j_A 155 AAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDE 221 (233)
T ss_dssp HHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGG
T ss_pred HHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHH
Confidence 2222222224569999999999999999998 666664555555554 899885 67777776654
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=2.1e-07 Score=90.53 Aligned_cols=67 Identities=15% Similarity=0.092 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhc-------cCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEA-------ADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~-------ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+..++. ||++..+++.+|+.++|++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 677777766543 3 45999999999999999999999998 888988885 7899988889999988853
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.3e-07 Score=89.74 Aligned_cols=123 Identities=13% Similarity=0.154 Sum_probs=82.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.+++.+.++.+++.|+++.++|+..........+..|+......++.++...... ..|.--..
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k----------------~~~~~~~~ 153 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHK----------------PDPEGLLL 153 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCT----------------TSTHHHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCC----------------CChHHHHH
Confidence 35899999999999999999999999988888888898876554454443321100 00111112
Q ss_pred HHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe----CCCCcHHHHhc-cCEEEecCCcchHHHHH
Q psy16789 318 IVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM----GKQGTDVCKEA-ADMILVDDDFNTIIAAI 379 (608)
Q Consensus 318 ~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~----~~~~~~~a~~~-ad~v~~~~~~~~i~~~i 379 (608)
+.+.+.-....++++||+.||++|++.||+++++ . ++.+..+.. ||+++. ++..+.+.+
T Consensus 154 ~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 154 AIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 2233322235689999999999999999998887 3 344444444 899885 444555444
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.50 E-value=9.6e-08 Score=91.58 Aligned_cols=126 Identities=12% Similarity=0.152 Sum_probs=94.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.+...+..+.+.+|+......+++++......+ .|+--.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----------------~~~~~~ 162 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKT----------------APAAYA 162 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTT----------------SHHHHT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCc----------------CHHHHH
Confidence 4568999999999999999999999999999999999999876666665554332110 121222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe----CCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM----GKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~----~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.+.+.+.-....++++||+.||+.|.+.||+++++ + ++.+..+..+|+++. ++..+.+.+..
T Consensus 163 ~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 163 LAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp HHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred HHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 33444443456799999999999999999999998 4 555555678999885 67777777654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.6e-07 Score=86.25 Aligned_cols=126 Identities=13% Similarity=0.079 Sum_probs=84.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC--C--ccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH--G--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~--~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
+.+++.+.++.|+++|+++.++|+........+.+.+|+.... . .+.+.+.... . ......+|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK-----------E-LDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE-----------E-EECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee-----------c-cCCCCCCcc
Confidence 6799999999999999999999999999999999999985321 0 0110110000 0 000112344
Q ss_pred hHHHHHHHH-HHCCCEEEEEcCCcCcHHHHHh----CCeeEEeCCCCcHHHHhccCEEEecCCcchHHHH
Q psy16789 314 HKLTIVKAF-QANGVIVGMTGDGVNDGVALKK----ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 314 ~K~~~v~~l-~~~g~~v~~~GDg~ND~~al~~----A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.+.+.+... .-....++++||+.||++|++. +.++++++ ++.+..+..||+++. ++..+.++
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~ 217 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASL 217 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHh
Confidence 555555444 4456889999999999999975 23444444 667788889999985 45544443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.49 E-value=2.7e-07 Score=90.67 Aligned_cols=125 Identities=18% Similarity=0.247 Sum_probs=87.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.+.+++.+.++.+++.|+++.++|+........+.+.+|+.... ..+++++...... ..|+--
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k----------------p~~~~~ 166 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGR----------------PYPWMC 166 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCT----------------TSSHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCC----------------CCHHHH
Confidence 45789999999999999999999999988888888888776542 4444444332111 113333
Q ss_pred HHHHHHHHHCC-CEEEEEcCCcCcHHHHHhCC---eeEEeCCCC------------------------cHHHHh-ccCEE
Q psy16789 316 LTIVKAFQANG-VIVGMTGDGVNDGVALKKAD---IGIAMGKQG------------------------TDVCKE-AADMI 366 (608)
Q Consensus 316 ~~~v~~l~~~g-~~v~~~GDg~ND~~al~~A~---vgia~~~~~------------------------~~~a~~-~ad~v 366 (608)
..+.+.+.-.. ..++++||+.||+.|++.|| ++++++ ++ .+..++ .||++
T Consensus 167 ~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 245 (267)
T 1swv_A 167 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 245 (267)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCcee
Confidence 34444444444 67999999999999999999 566666 33 233344 48998
Q ss_pred EecCCcchHHHHHH
Q psy16789 367 LVDDDFNTIIAAIE 380 (608)
Q Consensus 367 ~~~~~~~~i~~~i~ 380 (608)
+. ++..+.+.+.
T Consensus 246 ~~--~~~el~~~l~ 257 (267)
T 1swv_A 246 IE--TMQELESVME 257 (267)
T ss_dssp ES--SGGGHHHHHH
T ss_pred cc--CHHHHHHHHH
Confidence 84 6777777664
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.3e-07 Score=89.57 Aligned_cols=124 Identities=16% Similarity=0.172 Sum_probs=88.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.++......+ .|+--.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----------------~~~~~~ 173 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVN----------------KNEVIQ 173 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCC----------------HHHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCC----------------CHHHHH
Confidence 4679999999999999999999999999999999999999766555555544322110 011112
Q ss_pred HHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHH--HHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQAN-GVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDV--CKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~--a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.+.+.-. ...++++||+.||+.|.+.||+ +++++ ++... .+..+|+++. ++..+.+.|
T Consensus 174 ~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 174 YVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred HHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 333344434 5579999999999999999998 66666 33333 3578999886 566666544
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.7e-07 Score=91.00 Aligned_cols=122 Identities=20% Similarity=0.340 Sum_probs=86.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.+...+..+.+.+|+......+++++......+ .|+--.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp----------------~~~~~~ 177 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKP----------------HPAPFY 177 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTT----------------SSHHHH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCc----------------CHHHHH
Confidence 4578999999999999999999999999999999999999766555665554322111 133333
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE-eCC--C-CcHHHHhccCEEEecCCcchHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA-MGK--Q-GTDVCKEAADMILVDDDFNTII 376 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia-~~~--~-~~~~a~~~ad~v~~~~~~~~i~ 376 (608)
.+.+.+.-....++++||+.||++|.+.||+++. +.. + +.+..+..+|+++. ++..+.
T Consensus 178 ~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~ 239 (243)
T 2hsz_A 178 YLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADIL 239 (243)
T ss_dssp HHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGG
T ss_pred HHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHH
Confidence 4444554445679999999999999999998844 331 1 23445678899885 444443
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.46 E-value=3.3e-07 Score=87.68 Aligned_cols=125 Identities=12% Similarity=0.077 Sum_probs=86.2
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDG---QETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~---~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
+.+++.+.++.+++.|+++.++|+.. ........+..|+......++.+++.....+ .|+-
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----------------~~~~ 163 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKP----------------RKEM 163 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTT----------------CHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCC----------------CHHH
Confidence 47899999999999999999999999 8888888899998766555555443322110 1111
Q ss_pred HHHHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCeeEEeCC--CCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGV-NDGVALKKADIGIAMGK--QGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vgia~~~--~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
-..+.+.+.-....++++||+. ||+.|.+.||+++++-. ++.+..+..+|+++. ++..+.+.++
T Consensus 164 ~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 164 FEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp HHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred HHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 1122222222245699999999 99999999999999821 333334455787764 6666766653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.7e-07 Score=89.60 Aligned_cols=126 Identities=11% Similarity=0.145 Sum_probs=89.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
-++.+++.+.++.+++.|+++.++|+.+......+.+.+|+......+++++......+ .|+--
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----------------~~~~~ 158 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKP----------------HQKVY 158 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTT----------------CHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCC----------------ChHHH
Confidence 35679999999999999999999999999999999999998766555555544322110 01112
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC---CCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG---KQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~---~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
..+.+.+.-....++++||+.||+.|.+.||+++++- .++.+..+..+|+++. ++..+.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 159 ELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred HHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 2333334333467999999999999999999999982 1444555668898875 555554433
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.44 E-value=2e-07 Score=87.66 Aligned_cols=116 Identities=17% Similarity=0.158 Sum_probs=86.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++.|+++.++|+..........+..|+......++++++..... ..|+--.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k----------------p~~~~~~ 152 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESK----------------PNPEIYL 152 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCT----------------TSSHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCC----------------CChHHHH
Confidence 467899999999999999999999999999999999999987666666655433211 1122223
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCC-cHHHHhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQG-TDVCKEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~-~~~a~~~ad~v~~ 368 (608)
.+.+.+.-....++++||+.||+.|.+.||+++.+..++ ....+..+|+++.
T Consensus 153 ~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~ 205 (214)
T 3e58_A 153 TALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD 205 (214)
T ss_dssp HHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES
T ss_pred HHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH
Confidence 444444444567999999999999999999988875332 3344467898875
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.43 E-value=2.7e-07 Score=90.11 Aligned_cols=55 Identities=18% Similarity=0.108 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHC-----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc-HHHHhccCEEEe
Q psy16789 313 RHKLTIVKAFQAN-----GVIVGMTGDGVNDGVALKKADIGIAMGKQGT-DVCKEAADMILV 368 (608)
Q Consensus 313 ~~K~~~v~~l~~~-----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~-~~a~~~ad~v~~ 368 (608)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+ |+. +..++.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEec
Confidence 3588777766543 357999999999999999999999999 777 677888887764
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.42 E-value=7e-07 Score=85.45 Aligned_cols=124 Identities=19% Similarity=0.241 Sum_probs=90.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++. +++.++|+.+........+..|+......+++++...... ..|+--.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~k----------------p~~~~~~ 162 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFK----------------PHPRIFE 162 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCT----------------TSHHHHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCC----------------cCHHHHH
Confidence 4678999999999999 9999999999999999999999976655555554432111 0111122
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCC---eeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKAD---IGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~---vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.+.+.+.-....++++||+. ||+.|.+.|| ++++++ ++.+..++.+|+++. ++..+.+.++
T Consensus 163 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 163 LALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHH
Confidence 33334433346799999997 9999999999 577767 666777779999985 6666766664
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.41 E-value=7e-07 Score=87.86 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=89.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC-CCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI-HGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...+++++...... ..|.--
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k----------------p~~~~~ 174 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGR----------------PFPDMA 174 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCT----------------TSSHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCC----------------CCHHHH
Confidence 4678999999999999999999999999998889888887665 45555554432211 012222
Q ss_pred HHHHHHHHHCC-CEEEEEcCCcCcHHHHHhCC---eeEEeCCC-----------------------CcHHHH-hccCEEE
Q psy16789 316 LTIVKAFQANG-VIVGMTGDGVNDGVALKKAD---IGIAMGKQ-----------------------GTDVCK-EAADMIL 367 (608)
Q Consensus 316 ~~~v~~l~~~g-~~v~~~GDg~ND~~al~~A~---vgia~~~~-----------------------~~~~a~-~~ad~v~ 367 (608)
..+.+.+.-.. ..++++||+.||+.|.+.|| ++++++.+ ..+..+ ..+|+++
T Consensus 175 ~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~ 254 (277)
T 3iru_A 175 LKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVI 254 (277)
T ss_dssp HHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEe
Confidence 24444454445 77999999999999999999 56666532 123333 3489988
Q ss_pred ecCCcchHHHHHHH
Q psy16789 368 VDDDFNTIIAAIEE 381 (608)
Q Consensus 368 ~~~~~~~i~~~i~~ 381 (608)
. ++..+.++++.
T Consensus 255 ~--~~~el~~~l~~ 266 (277)
T 3iru_A 255 D--SVADLETVITD 266 (277)
T ss_dssp S--SGGGTHHHHHH
T ss_pred c--CHHHHHHHHHH
Confidence 5 67777777653
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.39 E-value=5.6e-07 Score=86.16 Aligned_cols=122 Identities=15% Similarity=0.147 Sum_probs=85.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+....+.++++++..... ..|+--.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~K----------------p~~~~~~ 166 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIK----------------PSPEPVL 166 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCT----------------TSSHHHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCC----------------CChHHHH
Confidence 367999999999999999999999999999999999999976655555554432111 1122223
Q ss_pred HHHHHHHHCCC-EEEEEcCCcCcHHHHHhCCe-eEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQANGV-IVGMTGDGVNDGVALKKADI-GIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~~g~-~v~~~GDg~ND~~al~~A~v-gia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.+.+.+.-... .++++||+.||+.|.+.||+ ++.++ ++.. ..+++++. ++..+.+.+.
T Consensus 167 ~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 167 AALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp HHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred HHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 44444444445 79999999999999999996 66676 5444 35677664 6666666553
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.39 E-value=4.5e-07 Score=86.58 Aligned_cols=125 Identities=17% Similarity=0.197 Sum_probs=88.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+......++++++..... ..|+-..
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~K----------------p~~~~~~ 146 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKK----------------PSPTPVL 146 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTC----------------CTTHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCC----------------CChHHHH
Confidence 457999999999999999999999999999999999999876555555554332111 1133333
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCC-CCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGK-QGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~-~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.+.+.+.-....++++||+.||++|.+.||++ |++.. .+.... ..+|+++. ++..+.+.+.
T Consensus 147 ~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 147 KTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp HHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred HHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 44444444456799999999999999999987 55541 222222 56888875 6677766654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=83.94 Aligned_cols=121 Identities=16% Similarity=0.100 Sum_probs=82.4
Q ss_pred CChhHHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 238 PRPHVRECMSTLLQS-GVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
+.+++.+.++.+++. |+++.++|+.....+....+..|+......++.+++.... ++.+.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-------------------~k~~~ 154 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR-------------------NELPH 154 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG-------------------GGHHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCc-------------------cchHH
Confidence 568999999999999 9999999999999999999999987655444444432110 11122
Q ss_pred HH----HHHHH--HCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHHH-h-ccCEEEecCCcchHHHHHH
Q psy16789 317 TI----VKAFQ--ANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVCK-E-AADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~----v~~l~--~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a~-~-~ad~v~~~~~~~~i~~~i~ 380 (608)
.+ .+.+. -....++++||+.||+.|.+.||+ +++.+ ++..... . .+|+++. ++..+.+.++
T Consensus 155 ~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~--~~~el~~~l~ 226 (234)
T 2hcf_A 155 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFK--NFAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred HHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeC--CHHhHHHHHH
Confidence 22 22332 223569999999999999999994 44444 3333332 2 3898875 4555665553
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.36 E-value=5.9e-07 Score=104.89 Aligned_cols=95 Identities=19% Similarity=0.254 Sum_probs=75.5
Q ss_pred chHHHHHHHHhhhhhceeeeCC---------ccccCchHHHHHHHHHhcC--chhhhhhcccccccccccccccceeeec
Q psy16789 32 KPETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFG--LYAVNEHYVRLKEYPFSSEQKMMAVRCI 100 (608)
Q Consensus 32 ~~~~~~ll~~~~l~n~a~~~~~---------~~~G~pte~All~~~~~~g--~~~~~~~~~~v~~~pF~s~~k~m~v~~~ 100 (608)
++...+++.++++||++.++.+ ...|||||.|++.++.+.+ ....+++++++.++||+|+||+|++++.
T Consensus 420 ~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~ 499 (1028)
T 2zxe_A 420 SATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHE 499 (1028)
T ss_dssp CHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEe
Confidence 4556788999999999877522 2579999999999998863 3456788999999999999999999987
Q ss_pred CCCCCccccceEEEEccchhh-hhccccce
Q psy16789 101 PKEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 101 ~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
..+.. ++..++++||++| ++..|+..
T Consensus 500 ~~~~~---~~~~~~~~KGA~e~il~~c~~~ 526 (1028)
T 2zxe_A 500 NEKSS---ESRYLLVMKGAPERILDRCSTI 526 (1028)
T ss_dssp CSCTT---TCCEEEEEEECHHHHHTTEEEE
T ss_pred ccCCC---CCcEEEEEeCCcHHHHHHhhhh
Confidence 53210 2346789999999 99999864
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.36 E-value=3.2e-07 Score=85.66 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=82.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
.+.+++.+.++.+++.|+++.++|+....... ..+..|+......++..++..... ..|+--.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~K----------------p~~~~~~ 147 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRK----------------PSPEAAT 147 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCT----------------TSSHHHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCC----------------CCcHHHH
Confidence 35789999999999999999999999888777 778888765443444333321110 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.+.++-....++++||+.||++|++.||++ ++++ ++. . .||+++. ++..+.+.+
T Consensus 148 ~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 148 YLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp HHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred HHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence 44444444456799999999999999999997 7777 555 3 6888875 555555543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.35 E-value=7.7e-07 Score=84.98 Aligned_cols=126 Identities=22% Similarity=0.233 Sum_probs=85.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC--CCCccccchhhcccCHHHHHHHhhcceEEEEe----
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT--IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV---- 310 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~--~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~---- 310 (608)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+.. ....++.-. . ...+.+..
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~-~-------------~~~~~~~~~~~~ 151 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY-F-------------NGEYAGFDETQP 151 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC-T-------------TSCEEEECTTSG
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEc-C-------------CCcEecCCCCCc
Confidence 578999999999999999999999999999999999999963 111110000 0 00011111
Q ss_pred --CchhHHHHHHHHHHC-C-CEEEEEcCCcCcHHHHHhCCeeEEeCCC-CcHHHHhccCEEEecCCcchHHHH
Q psy16789 311 --TPRHKLTIVKAFQAN-G-VIVGMTGDGVNDGVALKKADIGIAMGKQ-GTDVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 311 --~p~~K~~~v~~l~~~-g-~~v~~~GDg~ND~~al~~A~vgia~~~~-~~~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.+..|.++++.+.+. | ..++++||+.||+.+.+.||++|+++.. ..+.....+|+++. ++..+.+.
T Consensus 152 ~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 222 (225)
T 1nnl_A 152 TAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGE 222 (225)
T ss_dssp GGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC-
T ss_pred ccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHH
Confidence 123566666655433 4 5799999999999999999998888732 23444567898875 45544433
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.34 E-value=8.7e-07 Score=85.55 Aligned_cols=125 Identities=17% Similarity=0.117 Sum_probs=83.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC--CccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH--GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
.++.+++.+.++.|++.|+++.++|+..........+. |+.... +.++++++..... ..|+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~k----------------p~~~ 169 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGK----------------PNPE 169 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCT----------------TSSH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCC----------------CCCH
Confidence 35679999999999999999999999988877777777 887665 5566655432211 1122
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCcHH----HHhccCEEEecCCcchHHHHHH
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGTDV----CKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~~~----a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
--..+.+.+.-....++++||+.||+.|.+.||++ +.+. ++... .+..||+++. ++..+.+.++
T Consensus 170 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 170 PYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 22334444444456799999999999999999965 3343 33222 2247899885 6666666654
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=7.7e-07 Score=85.85 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=86.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+........+.+.+|+......++.+++..... ..|+--.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------p~~~~~~ 168 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYK----------------PDPRIYQ 168 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCT----------------TSHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCC----------------CCHHHHH
Confidence 467999999999999999999999999999999999999977665566555432211 0122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe---CCCCcHHHHhcc-CEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM---GKQGTDVCKEAA-DMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~---~~~~~~~a~~~a-d~v~~~~~~~~i~~~i 379 (608)
.+.+.+.-....++++||+.||+.|.+.||+.... + +..+..+..+ |+++. ++..+.+.+
T Consensus 169 ~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 169 FACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHHHH
Confidence 33344433345689999999999999999965443 3 2223334456 88875 566666655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.32 E-value=3.8e-07 Score=87.41 Aligned_cols=125 Identities=13% Similarity=0.167 Sum_probs=86.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.+...+..+.+.+|+......++.+++..... ..|+--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------p~~~~~~ 158 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYK----------------PDNRVYE 158 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCT----------------TSHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCC----------------CCHHHHH
Confidence 467999999999999999999999999999999999999876555555554432111 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCC---CCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGK---QGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~---~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.+.+.-....++++||+.||+.|.+.||+++++-. +..+..+..+|+++. ++..+...+
T Consensus 159 ~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 159 LAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 3344443334568999999999999999999988731 222334456888874 455554433
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.31 E-value=3.5e-06 Score=81.27 Aligned_cols=126 Identities=17% Similarity=0.179 Sum_probs=86.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+......++.++......+ .|+--.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----------------~~~~~~ 157 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKP----------------HPKIFK 157 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTT----------------CHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCC----------------CHHHHH
Confidence 3579999999999999999999999999888899999998776555655544322110 111112
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCeeEEeC--CCCcHHHHh---ccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKADIGIAMG--KQGTDVCKE---AADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vgia~~--~~~~~~a~~---~ad~v~~~~~~~~i~~~i~ 380 (608)
.+.+.+.-....++++||+. ||+.|.+.||++++.- +.+...... .+|+++. ++..+.+.+.
T Consensus 158 ~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 158 KALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 23333333345699999998 9999999999876542 133333332 6888875 5666666553
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.30 E-value=3.4e-07 Score=91.43 Aligned_cols=132 Identities=14% Similarity=0.096 Sum_probs=87.7
Q ss_pred CCChhHHHHHHHHHhC-CCeEEEEcCC---------------------cHHHHHHHHHHcCCCCCCCccccchhhcccCH
Q psy16789 237 PPRPHVRECMSTLLQS-GVKVKLVTGD---------------------GQETATAIASMVGLDTIHGKVLSGDQIDQMTE 294 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~-Gi~v~~~TGd---------------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 294 (608)
.+++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...... .......
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~~~~~~~-- 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINR---CNPLAGD-- 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEE---CCGGGTC--
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEE---ccccccC--
Confidence 4568999999999998 9998888865 22233333333333211000 0000000
Q ss_pred HHHHHHhhcceEEEEeCc--hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEe
Q psy16789 295 HQLQQVVNSVTVFYRVTP--RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILV 368 (608)
Q Consensus 295 ~~~~~~~~~~~v~~r~~p--~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~ 368 (608)
.....+....| ..|...++.+.+. | ..++++||+.||.+|++.|++|++++ ++.+..++.||+++.
T Consensus 197 -------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~ 268 (289)
T 3gyg_A 197 -------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITD 268 (289)
T ss_dssp -------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCS
T ss_pred -------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcC
Confidence 00002233333 3677766665543 3 46999999999999999999999999 899999999999998
Q ss_pred cCCcchHHHHHHH
Q psy16789 369 DDDFNTIIAAIEE 381 (608)
Q Consensus 369 ~~~~~~i~~~i~~ 381 (608)
+++.+++.++|++
T Consensus 269 ~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 269 SEYSKGITNTLKK 281 (289)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHH
Confidence 8888899888853
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.29 E-value=8.2e-07 Score=85.84 Aligned_cols=124 Identities=17% Similarity=0.135 Sum_probs=84.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC--CccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH--GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
++.+++.+.++.|++.|+++.++|+..........+. |+.... +.++++++..... ..|+-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~k----------------p~~~~ 171 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGK----------------PNPEP 171 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCT----------------TSSHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCC----------------CChHH
Confidence 4679999999999999999999999987777777777 887665 5566655542211 01222
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCcHH----HHhccCEEEecCCcchHHHHHH
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGTDV----CKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~~~----a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
-..+.+.+.-....++++||+.||+.|.+.||++ +.+. ++... .+..||+++. ++..+.+.++
T Consensus 172 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 172 YLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 2233333333346699999999999999999984 4444 33222 2346899885 6666666553
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.7e-06 Score=80.49 Aligned_cols=101 Identities=19% Similarity=0.109 Sum_probs=74.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-----eC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-----VT 311 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-----~~ 311 (608)
.+.+++.+.++.|+++|+++.++||.....+..+++.+|+.......+...+ -....+ ..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------~~~~g~~~~~~~~ 156 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRD---------------GRYTGRIEGTPSF 156 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEET---------------TEEEEEEESSCSS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEEC---------------CEEeeeecCCCCc
Confidence 4689999999999999999999999999999999999999632111110000 000111 12
Q ss_pred chhHHHHHHHH-HHCC------CEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 312 PRHKLTIVKAF-QANG------VIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 312 p~~K~~~v~~l-~~~g------~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
+..|.+.++.+ ++.| ..+.++||+.||++|++.||+++++.
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 35676666544 3345 67999999999999999999999996
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=5e-07 Score=89.67 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=87.3
Q ss_pred CCCChhHHHHHHHHHhCCC--eEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 236 DPPRPHVRECMSTLLQSGV--KVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi--~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
-++.+++.+.++.|++.|+ ++.++|+.....+....+.+|+....+.+++++...... ..+.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~----------------~~~K 204 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDT----------------LVCK 204 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSS----------------CCCT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcc----------------cCCC
Confidence 3567999999999999999 999999999999999999999987666655444321100 0122
Q ss_pred hHHHHH----HHHHHCC-CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHH------HhccCEEEecCCcchHHHH
Q psy16789 314 HKLTIV----KAFQANG-VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVC------KEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 314 ~K~~~v----~~l~~~g-~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a------~~~ad~v~~~~~~~~i~~~ 378 (608)
.|.+++ +.+.-.. ..++++||+.||+.|.+.||+|.+++ ++.... ...||+++. ++..+.++
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi~--sl~el~~~ 277 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVIS--DILELPHV 277 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEES--SGGGGGGT
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEeC--CHHHHHHH
Confidence 333333 3333334 67999999999999999999988886 322222 347788875 55554443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.26 E-value=2.5e-06 Score=83.65 Aligned_cols=68 Identities=32% Similarity=0.351 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+..+..||+++.+.+.+|+.+++++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 3677777666543 3 46999999999999999999999998 8889999999999998888889988853
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.7e-06 Score=80.93 Aligned_cols=121 Identities=12% Similarity=0.125 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+ ++.|+++ +++.++|+.+...+..+.+.+|+......++++++..... ..|+--.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------p~~~~~~ 135 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYK----------------PSPKVYK 135 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCT----------------TCHHHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCC----------------CCHHHHH
Confidence 45689999 9999999 9999999999998999999999976665666555432211 0122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC---CCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG---KQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~---~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.+.+. ...++++||+.||+.|.+.||++.++- .+..+..+..+|+++. ++..+.+.+
T Consensus 136 ~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 197 (201)
T 2w43_A 136 YFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWI 197 (201)
T ss_dssp HHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred HHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 3444444 567899999999999999999987762 1222333456888774 555555554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1e-06 Score=86.04 Aligned_cols=126 Identities=14% Similarity=0.125 Sum_probs=86.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc-cccchhhc-ccCHHHHHHHhhcceEEEEeCchh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK-VLSGDQID-QMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~-vi~g~~~~-~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...... ++++++.. ... ..|+-
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~K----------------p~~~~ 173 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGK----------------PHPDL 173 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCT----------------TSSHH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCC----------------CChHH
Confidence 3568999999999999999999999999999999999998654444 44444332 111 01211
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCC-------c-HHHHhccCEEEecCCcchHHHHHHH
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQG-------T-DVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~-------~-~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
-..+.+.+.-....++++||+.||+.|.+.||++ +.+. .+ . +..+..+|+++. ++..+.+.++.
T Consensus 174 ~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 174 YTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 1223333333346799999999999999999998 4443 22 2 233345899885 77777777754
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.5e-06 Score=83.96 Aligned_cols=122 Identities=18% Similarity=0.183 Sum_probs=82.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+. ....++++++..... ..|+-=..
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~~~K----------------p~p~~~~~ 173 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGIRRK----------------PAPDMTSE 173 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTSCCT----------------TSSHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCCCCC----------------CCHHHHHH
Confidence 4689999999999999999999999988888888899987 555555554432111 01221123
Q ss_pred HHHHHHHCCCEEEEEcCCcCcHHHHHhCCee---EEeCCCCc-HHHH-hccCEEEecCCcchHHHHH
Q psy16789 318 IVKAFQANGVIVGMTGDGVNDGVALKKADIG---IAMGKQGT-DVCK-EAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 318 ~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg---ia~~~~~~-~~a~-~~ad~v~~~~~~~~i~~~i 379 (608)
+.+.+.-....++++||+.||+.|.+.||+. ++++ .+. +..+ ..+|+++. ++..+...+
T Consensus 174 ~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 174 CVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 3333433346799999999999999999984 4444 322 3333 36888874 455554443
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.19 E-value=2.4e-06 Score=81.90 Aligned_cols=119 Identities=14% Similarity=0.148 Sum_probs=86.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.++ .|+++.++|+..........+.+|+....+.++.+++... ...|.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------------~kp~~ 165 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGV--------------------LKPRP 165 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC--------------------CTTSH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCC--------------------CCCCH
Confidence 45789999999999 9999999999999988999999998776666655544322 11222
Q ss_pred HHHH-HHHHC---CCEEEEEcCCc-CcHHHHHhCCeeEEeCCCCc-HHHHhccCEEEecCCcchHHHH
Q psy16789 317 TIVK-AFQAN---GVIVGMTGDGV-NDGVALKKADIGIAMGKQGT-DVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 317 ~~v~-~l~~~---g~~v~~~GDg~-ND~~al~~A~vgia~~~~~~-~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.+++ .+++. ...++++||+. ||+.|.+.||+++++...+. ...+..+|+++. ++..+..+
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHH
Confidence 3333 23333 45799999995 99999999999999973333 255567899886 45555443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.19 E-value=2.5e-06 Score=83.10 Aligned_cols=124 Identities=15% Similarity=0.213 Sum_probs=87.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+ |+++.++|+.+...+..+.+.+|+......++.+++.....+ .|+--.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp----------------~~~~~~ 154 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKP----------------HPDSYA 154 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTT----------------SHHHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCC----------------CHHHHH
Confidence 56799999999999 999999999999999999999998766655655554322110 122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCC-----------------------C---cHHHHhccCEEEecC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQ-----------------------G---TDVCKEAADMILVDD 370 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~-----------------------~---~~~a~~~ad~v~~~~ 370 (608)
.+.+.+.-....++++||+.||+.|.+.||++.++... + .+..+..+|+++.
T Consensus 155 ~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 232 (253)
T 1qq5_A 155 LVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVP-- 232 (253)
T ss_dssp HHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEES--
T ss_pred HHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeC--
Confidence 33333333345689999999999999999999887623 1 2233456888874
Q ss_pred CcchHHHHHH
Q psy16789 371 DFNTIIAAIE 380 (608)
Q Consensus 371 ~~~~i~~~i~ 380 (608)
++..+...+.
T Consensus 233 ~~~el~~~l~ 242 (253)
T 1qq5_A 233 ALGDLPRLVR 242 (253)
T ss_dssp SGGGHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777776664
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.5e-06 Score=79.90 Aligned_cols=125 Identities=17% Similarity=0.169 Sum_probs=78.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHcC--CCCCCCcccc-chhhcccCHHHHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQ---------------ETATAIASMVG--LDTIHGKVLS-GDQIDQMTEHQLQ 298 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~~g--i~~~~~~vi~-g~~~~~~~~~~~~ 298 (608)
++.+++.+++++|+++|+++.++|+.+. ..+....+.+| +......... +++.....
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~K----- 101 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRK----- 101 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSST-----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCC-----
Confidence 4679999999999999999999999985 55566677777 3321100000 11111000
Q ss_pred HHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHHH----hccCEEEecCC
Q psy16789 299 QVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVCK----EAADMILVDDD 371 (608)
Q Consensus 299 ~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a~----~~ad~v~~~~~ 371 (608)
..|+--..+.+.+.-....++++||+.||+.+.+.||+ ++..+ .+..... ..+|+++. +
T Consensus 102 -----------P~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v~~--~ 167 (179)
T 3l8h_A 102 -----------PLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRVCE--D 167 (179)
T ss_dssp -----------TSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEEES--S
T ss_pred -----------CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEEec--C
Confidence 01222223444444445679999999999999999994 66655 4433333 45788875 5
Q ss_pred cchHHHHHH
Q psy16789 372 FNTIIAAIE 380 (608)
Q Consensus 372 ~~~i~~~i~ 380 (608)
+..+.+.+.
T Consensus 168 l~el~~~l~ 176 (179)
T 3l8h_A 168 LAAVAEQLL 176 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666553
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.17 E-value=3.8e-06 Score=80.39 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=88.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++. +++.++|+.....+....+.+|+......++.+++... ...|.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------------~kp~~ 161 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGF--------------------QKPMK 161 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTS--------------------CTTCH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCC--------------------CCCCh
Confidence 4678999999999999 99999999999999999999999876655555544322 12223
Q ss_pred HHHHH-HHHCC----CEEEEEcCCc-CcHHHHHhCCeeEE-eCC-CCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKA-FQANG----VIVGMTGDGV-NDGVALKKADIGIA-MGK-QGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~-l~~~g----~~v~~~GDg~-ND~~al~~A~vgia-~~~-~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.+++. +++.| ..++++||+. ||+.|.+.||++.. +.. +..+..+..+|+++. ++..+.+++.
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 33333 33334 4699999998 99999999998544 431 225556678899885 6777777664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.16 E-value=2.1e-06 Score=82.83 Aligned_cols=138 Identities=16% Similarity=0.167 Sum_probs=89.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHh--hcceEEEEeCch
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV--NSVTVFYRVTPR 313 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~--~~~~v~~r~~p~ 313 (608)
-++.+++.+.++.|+++|+++.++|+.+...+..+.+ |+... ..+++.+...... .+.... +....+.+....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~--~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDND--YIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSS--BCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCC--ceEEecCCCCccccccccCC
Confidence 3578999999999999999999999999988888887 76443 4444443321100 000000 000000001234
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhc--cCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEA--ADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~--ad~v~~~~~~~~i~~~i~~ 381 (608)
.|..+++.+......++++||+.+|+.+.+.||+.++.. ...+..+.. +|+++ +++..+.+.+..
T Consensus 151 ~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 151 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred cHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 677888888777789999999999999999999988743 222223332 66665 367777766643
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.16 E-value=8.3e-07 Score=86.19 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=76.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH-HHcCCCCCCCccccch--hhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA-SMVGLDTIHGKVLSGD--QIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia-~~~gi~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
++.+++.+.++.|++.|+++.++|+.......... +..|+......++.++ .... ..
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~--------------------~K 171 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQH--------------------GK 171 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCS--------------------CT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccC--------------------CC
Confidence 46789999999999999999999999876655433 2235544444444443 2211 11
Q ss_pred hHHHHHH-HHHHCC-----CEEEEEcCCcCcHHHHHhCC---eeEEeCCCCcHHHHhccCEEEec
Q psy16789 314 HKLTIVK-AFQANG-----VIVGMTGDGVNDGVALKKAD---IGIAMGKQGTDVCKEAADMILVD 369 (608)
Q Consensus 314 ~K~~~v~-~l~~~g-----~~v~~~GDg~ND~~al~~A~---vgia~~~~~~~~a~~~ad~v~~~ 369 (608)
.+.++++ .+++.| ..++++||+.||+.|.+.|| ++++.+ ++.+..+..||+++.+
T Consensus 172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~s 235 (250)
T 3l5k_A 172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNS 235 (250)
T ss_dssp TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSC
T ss_pred CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecC
Confidence 1223333 333333 67999999999999999999 556556 6666788899999863
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=3.9e-06 Score=79.88 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=81.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-Cccccchhhccc--CHHHHHHHhhcceEEEEeCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQM--TEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~--~~~~~~~~~~~~~v~~r~~p~ 313 (608)
++.+++.+.++.++. ++.++|+.+......+.+.+|+.... ..+++++..... . ..|.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~k----------------pk~~ 147 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVK----------------PKPD 147 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCT----------------TSSH
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCC----------------cCHH
Confidence 346788888887764 99999999999888999999987644 444444432110 0 0122
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCcH-------HHHhc-cCEEEecCCcchHHHHH
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGTD-------VCKEA-ADMILVDDDFNTIIAAI 379 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~~-------~a~~~-ad~v~~~~~~~~i~~~i 379 (608)
--..+.+.+.-....++++||+.||++|++.||++ +++. ++.. ..++. ||+++. ++..+.+.+
T Consensus 148 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 148 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 22233344433346799999999999999999998 6666 4433 35666 999885 566666655
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=4.9e-06 Score=78.85 Aligned_cols=135 Identities=21% Similarity=0.189 Sum_probs=80.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHHHcCCCCCCCccc-cchhhcccCHHHHHHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDG---------------QETATAIASMVGLDTIHGKVL-SGDQIDQMTEHQLQQV 300 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~---------------~~ta~~ia~~~gi~~~~~~vi-~g~~~~~~~~~~~~~~ 300 (608)
++.+++.++++.|+++|+++.++|+.. ...+..+.+.+|+. ...++ .+...+....+
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~----- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEE----- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGG-----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccc-----
Confidence 678999999999999999999999999 46677788888886 22222 11100000000
Q ss_pred hhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee--EEe--CCCCcHHHHhccCEEEecCCcchHH
Q psy16789 301 VNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG--IAM--GKQGTDVCKEAADMILVDDDFNTII 376 (608)
Q Consensus 301 ~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg--ia~--~~~~~~~a~~~ad~v~~~~~~~~i~ 376 (608)
...........|+--..+.+.+.-....++|+||+.||+.+.+.||+. +.+ +....+.....+|+++. ++..+.
T Consensus 123 ~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l~el~ 200 (211)
T 2gmw_A 123 FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLP 200 (211)
T ss_dssp GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHH
T ss_pred cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CHHHHH
Confidence 000000000112222233344433346689999999999999999964 333 32222333456898875 677777
Q ss_pred HHHH
Q psy16789 377 AAIE 380 (608)
Q Consensus 377 ~~i~ 380 (608)
+++.
T Consensus 201 ~~l~ 204 (211)
T 2gmw_A 201 QAIK 204 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.14 E-value=9.2e-06 Score=76.76 Aligned_cols=126 Identities=21% Similarity=0.226 Sum_probs=88.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.+...+....+.+|+....+.++.+++.....+ .|+-=.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP----------------~p~~~~ 147 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKP----------------DPEIYL 147 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTT----------------STHHHH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcc----------------cHHHHH
Confidence 3568999999999999999999999999999999999999887777776666543221 133333
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee----EEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG----IAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg----ia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.+.+.+.-....++|+||+.+|+.+-+.||+. +..+.+..+..+++.+..+. +...+.+.++
T Consensus 148 ~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~~l~ 213 (216)
T 3kbb_A 148 LVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp HHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred HHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHHHHH
Confidence 44455544456799999999999999999974 33343344444444333333 3445665554
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.14 E-value=3e-06 Score=78.20 Aligned_cols=105 Identities=11% Similarity=0.022 Sum_probs=72.6
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.+++.+.++.+++.|+++.++|+... .+....+..|+......++++++... +..|.+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~--------------------~kp~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFK--------------------RKPNPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCC--------------------CTTSCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCC--------------------CCCCHH
Confidence 578999999999999999999998864 56677788888654444444433211 111222
Q ss_pred HHH-HHHHCCC-EEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC
Q psy16789 318 IVK-AFQANGV-IVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364 (608)
Q Consensus 318 ~v~-~l~~~g~-~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad 364 (608)
.++ .+++.|. .++++||+.||++|.+.||+++++- +.....++..+
T Consensus 142 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 222 2333332 6899999999999999999998887 55555555443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=4.4e-07 Score=85.51 Aligned_cols=114 Identities=12% Similarity=0.118 Sum_probs=79.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++. +++.++|+.+......+.+.+|+......++++++..... ..|+--.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------P~~~~~~ 145 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRK----------------PDPLPLL 145 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCT----------------TSSHHHH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCC----------------CCcHHHH
Confidence 3578999999999999 9999999999998888998888865444444444321111 0122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCC--C-CcHHHHhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGK--Q-GTDVCKEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~--~-~~~~a~~~ad~v~~ 368 (608)
.+.+.+.-....++++||+.||+.|.+.||+++++.. . ..+..++ +|+++.
T Consensus 146 ~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~ 199 (209)
T 2hdo_A 146 TALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ 199 (209)
T ss_dssp HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES
T ss_pred HHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC
Confidence 3333333334579999999999999999999998731 2 2344444 899885
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.8e-06 Score=83.94 Aligned_cols=114 Identities=16% Similarity=0.092 Sum_probs=79.5
Q ss_pred CChhHHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 238 PRPHVRECMSTLLQS-GVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
+.+++.+.++.+++. |+++.++|+.....+....+..|+.. ...++++++..... ..|+--.
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f~~i~~~~~~~~~k----------------p~~~~~~ 177 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-PEYFITANDVKQGK----------------PHPEPYL 177 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-CSSEECGGGCSSCT----------------TSSHHHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-cCEEEEcccCCCCC----------------CChHHHH
Confidence 468999999999999 99999999999998888888888863 34455555432211 0122222
Q ss_pred HHHHHHHH-------CCCEEEEEcCCcCcHHHHHhCCeeEEe---CCCCcHHHH-hccCEEEec
Q psy16789 317 TIVKAFQA-------NGVIVGMTGDGVNDGVALKKADIGIAM---GKQGTDVCK-EAADMILVD 369 (608)
Q Consensus 317 ~~v~~l~~-------~g~~v~~~GDg~ND~~al~~A~vgia~---~~~~~~~a~-~~ad~v~~~ 369 (608)
.+.+.+.- ....++++||+.||+.|++.||+++++ + +..+..+ ..||+++.+
T Consensus 178 ~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~-~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 178 KGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATT-FDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSS-SCHHHHTTSSCSEEESS
T ss_pred HHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCC-CCHHHHhhCCCCEEECC
Confidence 33444433 345699999999999999999977665 4 3333333 358998764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=2.3e-06 Score=80.86 Aligned_cols=115 Identities=17% Similarity=0.205 Sum_probs=81.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++ |+++.++|+.+...+....+.+|+......++.++ . .+..|.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~--------------------~~Kp~p 140 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--P--------------------EAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--S--------------------SCCSHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--C--------------------CCCCCh
Confidence 356899999999999 99999999999888888889999976555444333 1 122333
Q ss_pred HHHHH-HHHCC---CEEEEEcCCcCcHHHHHhCCe---eEEeCCCC-cHHHH-hccCEEEecCCcchHHH
Q psy16789 317 TIVKA-FQANG---VIVGMTGDGVNDGVALKKADI---GIAMGKQG-TDVCK-EAADMILVDDDFNTIIA 377 (608)
Q Consensus 317 ~~v~~-l~~~g---~~v~~~GDg~ND~~al~~A~v---gia~~~~~-~~~a~-~~ad~v~~~~~~~~i~~ 377 (608)
++.+. +++.| ..++++||+.||+.|.+.||+ +++++ ++ .+..+ ..+|+++. ++..+.+
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEES--STTHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 44333 33333 569999999999999999997 66666 44 33333 36898875 4444443
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.08 E-value=7.9e-06 Score=75.88 Aligned_cols=135 Identities=14% Similarity=0.079 Sum_probs=89.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQ---ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
++.+++.++++.|+++|+++.++|+... ..+..+.+.+|+......+++.++..... -.....|+
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~------------~~~KP~p~ 101 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPG------------KMEKPDKT 101 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTT------------CCCTTSHH
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccccc------------CCCCcCHH
Confidence 5789999999999999999999998876 88889999999976555554444320000 00001122
Q ss_pred hHHHHHHHHHHCCCEEEEEcCC-cCcHHHHHhCCeeEEeCCCCcH-----HHH-hccCEEEecCCcchHHHHHHHHH
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDG-VNDGVALKKADIGIAMGKQGTD-----VCK-EAADMILVDDDFNTIIAAIEEGK 383 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg-~ND~~al~~A~vgia~~~~~~~-----~a~-~~ad~v~~~~~~~~i~~~i~~gR 383 (608)
--..+.+.+.-....++++||+ .+|+.+-+.||+....-.++.. ... ..+|+++...++..+.++++..+
T Consensus 102 ~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 102 IFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178 (189)
T ss_dssp HHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence 2223444444445679999999 7999999999976544212221 111 26788888778888888876544
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.06 E-value=3e-06 Score=83.14 Aligned_cols=124 Identities=12% Similarity=0.145 Sum_probs=87.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.+++.++++.|++.|+++.++|+.... ...+.+.+|+......++.+++..... ..|+--..
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~K----------------p~~~~~~~ 169 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGWPK----------------PDPRIFQE 169 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHSSCT----------------TSHHHHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccCCCC----------------CCHHHHHH
Confidence 5699999999999999999999987664 578888899877666666555432211 11222223
Q ss_pred HHHHHHHCCCEEEEEcCCc-CcHHHHHhCCeeEEeCCCCcHH-----HHhccCEEEecCCcchHHHHHH
Q psy16789 318 IVKAFQANGVIVGMTGDGV-NDGVALKKADIGIAMGKQGTDV-----CKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 318 ~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vgia~~~~~~~~-----a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
+.+.+.-....++++||+. ||+.|.+.||+++++...+... ....+|+++. ++..+.+.+.
T Consensus 170 ~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~ 236 (263)
T 3k1z_A 170 ALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALD 236 (263)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHH
Confidence 4444444456799999997 9999999999999986333211 2236888875 6777777764
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.05 E-value=4e-06 Score=81.26 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=83.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++. +++.++|+........+.+.+|+. ...+++++.... ...|.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~~--------------------~kp~~ 176 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFGH--------------------YKPDP 176 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHTC--------------------CTTSH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeeccccc--------------------CCCCH
Confidence 3568999999999985 999999999999889999999985 334444433221 22233
Q ss_pred HHH----HHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCC----CC---cHHH--HhccCEEEecCCcchHHHHH
Q psy16789 317 TIV----KAFQANGVIVGMTGDGVNDGVALKKADIGIAMGK----QG---TDVC--KEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v----~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~----~~---~~~a--~~~ad~v~~~~~~~~i~~~i 379 (608)
.++ +.+.-....++++||+.||+.|.+.||+++++.. .+ .+.. +..+|+++. ++..+.+++
T Consensus 177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l 250 (254)
T 3umc_A 177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQL 250 (254)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHh
Confidence 333 3333334679999999999999999999999973 11 1222 567899885 666666655
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.05 E-value=5.5e-06 Score=80.08 Aligned_cols=120 Identities=12% Similarity=0.073 Sum_probs=85.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++. +++.++|+........+.+.+|+. ...+++++.... ...|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~--------------------~kp~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINRK--------------------YKPDP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHTC--------------------CTTSH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCCC--------------------CCCCH
Confidence 4578999999999997 999999999999999999999985 334444433322 11122
Q ss_pred HHHH-HHHHC---CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc-------HH--HHhccCEEEecCCcchHHHHHHH
Q psy16789 317 TIVK-AFQAN---GVIVGMTGDGVNDGVALKKADIGIAMGKQGT-------DV--CKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 317 ~~v~-~l~~~---g~~v~~~GDg~ND~~al~~A~vgia~~~~~~-------~~--a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.+++ .+++. ...++++||+.||+.|.+.||+++++..... +. .+..+|+++. ++..+.+++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhcC
Confidence 3333 23333 3569999999999999999999999873111 11 3567898885 77777776643
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.99 E-value=7.1e-06 Score=78.42 Aligned_cols=123 Identities=11% Similarity=0.151 Sum_probs=83.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++ |+++.++|+.+........+.++ .....++++++..... ..|+-..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~--~~fd~i~~~~~~~~~K----------------P~~~~~~ 159 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLG--VEFDHIITAQDVGSYK----------------PNPNNFT 159 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTC--SCCSEEEEHHHHTSCT----------------TSHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcC--CccCEEEEccccCCCC----------------CCHHHHH
Confidence 567999999999999 89999999999887777766643 3344455554433211 1122222
Q ss_pred HHHHHHHHC---CCEEEEEcCCc-CcHHHHHhCCeeEEeCCCC----------cHHHHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQAN---GVIVGMTGDGV-NDGVALKKADIGIAMGKQG----------TDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~~---g~~v~~~GDg~-ND~~al~~A~vgia~~~~~----------~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.+++.+++. ...++++||+. ||+.|.+.||+++++...+ .+..+..+|+++. ++..+.+.+.
T Consensus 160 ~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~~l~ 235 (240)
T 3smv_A 160 YMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAEAHK 235 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHHHHH
Confidence 343334443 45699999996 9999999999999985221 1334478899885 6666666653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.99 E-value=8.1e-06 Score=77.60 Aligned_cols=115 Identities=13% Similarity=0.035 Sum_probs=79.6
Q ss_pred CCChhHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSG-VKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.+++.| +++.++|+.+........+.+|+......++ +. +..|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~-----------------------~~--~kpk 159 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIE-----------------------VM--SDKT 159 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEE-----------------------EE--SCCS
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheee-----------------------ec--CCCC
Confidence 46789999999999999 9999999999888888888888865443332 22 1224
Q ss_pred HHHHHHH----HHCCCEEEEEcCCc-CcHHHHHhCCeeEEeC------CCCcHHHHhcc-CEEEecCCcchHHHH
Q psy16789 316 LTIVKAF----QANGVIVGMTGDGV-NDGVALKKADIGIAMG------KQGTDVCKEAA-DMILVDDDFNTIIAA 378 (608)
Q Consensus 316 ~~~v~~l----~~~g~~v~~~GDg~-ND~~al~~A~vgia~~------~~~~~~a~~~a-d~v~~~~~~~~i~~~ 378 (608)
..+++.+ .-....++++||+. ||+.|.+.||+++++- +++....+..+ |+++. ++..+.++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l~el~~~ 232 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RLDDLLSL 232 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SGGGHHHH
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cHHHHHHh
Confidence 4444433 32346699999996 9999999999988872 13323323334 77765 56666554
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.96 E-value=8.5e-06 Score=84.29 Aligned_cols=105 Identities=16% Similarity=0.183 Sum_probs=72.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC--CCccccchhhcccCHHHHHHHhhcceEEEE-----
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI--HGKVLSGDQIDQMTEHQLQQVVNSVTVFYR----- 309 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r----- 309 (608)
.+++++.+.|+.|+++|++|+++||.....++.+|+++|+... ...|+ |.++...++ -.+-.+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~d---------G~~tg~~~~~~ 290 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDE---------GKILPKFDKDF 290 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTT---------CCEEEEECTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecC---------CceeeeecCcc
Confidence 4689999999999999999999999999999999999987432 12222 333321110 011122
Q ss_pred --eCchhHHHHHHHHHHC--C-CEEEEEcCCcCcHHHHHh-CCeeEEe
Q psy16789 310 --VTPRHKLTIVKAFQAN--G-VIVGMTGDGVNDGVALKK-ADIGIAM 351 (608)
Q Consensus 310 --~~p~~K~~~v~~l~~~--g-~~v~~~GDg~ND~~al~~-A~vgia~ 351 (608)
+..+.|...++.+.+. | ..++++|||.||.+||+. +|.++++
T Consensus 291 p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 291 PISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp CCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred ceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2345788888776433 2 347889999999999996 4544443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=2.2e-05 Score=89.74 Aligned_cols=82 Identities=16% Similarity=0.136 Sum_probs=64.1
Q ss_pred HHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCch-hhhhhcccccccccccccccceeeecCCCCCccccceEEEE
Q psy16789 37 TLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLY-AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF 115 (608)
Q Consensus 37 ~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~-~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~ 115 (608)
+++.++++||+... . -|||+|.|++.++.+.+.. ...+.+++++++||+|++|+|++++...+|. .+.+
T Consensus 403 ~ll~~a~l~~~~~~--~--~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~------~~~~ 472 (920)
T 1mhs_A 403 DLMLTACLAASRKK--K--GIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGE------RITC 472 (920)
T ss_dssp HHHHHHHHSCCCSS--C--SCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSS------CEEE
T ss_pred HHHHHHHHhcCCcc--c--CCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCCCc------EEEE
Confidence 46778889987531 1 1599999999998877642 3456788999999999999999998754433 4778
Q ss_pred ccchhh-hhccccc
Q psy16789 116 LHRLLE-VGCVCNN 128 (608)
Q Consensus 116 ~kg~~e-i~~lc~~ 128 (608)
+||++| ++.+|+.
T Consensus 473 ~KGape~il~~c~~ 486 (920)
T 1mhs_A 473 VKGAPLFVLKTVEE 486 (920)
T ss_dssp EEECHHHHHHHCCC
T ss_pred EeCCHHHHHHhccc
Confidence 999999 8899974
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.5e-05 Score=74.20 Aligned_cols=99 Identities=15% Similarity=0.123 Sum_probs=73.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.| ++.++|+.+......+.+.+|+......++.+++..... ..|+--.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~K----------------p~~~~~~ 148 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMK----------------PNPAMYR 148 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCT----------------TCHHHHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCC----------------CCHHHHH
Confidence 36799999999999999 999999999999999999999876555555544332111 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
.+.+.+.-....++++||+.||+.|.+.||+...+-
T Consensus 149 ~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 149 LGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 334444434467999999999999999999988875
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.88 E-value=5.4e-06 Score=77.97 Aligned_cols=99 Identities=11% Similarity=0.051 Sum_probs=70.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH------cCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM------VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~------~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
++.+++.+.++.|++ |+++.++|+........+.+. .|+....+.++.+++..... .
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~K----------------p 151 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYK----------------P 151 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCT----------------T
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCC----------------C
Confidence 356899999999999 999999999998888877777 67765444444443322111 1
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
.|+--..+.+.+.-....++++||+.||+.|.+.||++.++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~ 193 (211)
T 2i6x_A 152 NEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP 193 (211)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred CHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence 121222333444333467999999999999999999999887
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.83 E-value=5.2e-05 Score=74.16 Aligned_cols=124 Identities=13% Similarity=0.123 Sum_probs=85.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|++ |+++.++|+.+...+..+.+.+|+....+.++.+++..... ..|+--.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~K----------------P~p~~~~ 183 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEK----------------PAPSIFY 183 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCT----------------TCHHHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCCC----------------CCHHHHH
Confidence 467999999999998 59999999999999899999999987666666555432211 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCC-cCcHHHHHhCCe--eEEeCCCCc--HHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDG-VNDGVALKKADI--GIAMGKQGT--DVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg-~ND~~al~~A~v--gia~~~~~~--~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.+.+.-....++++||+ .||+.+.+.||+ .+.+..... ......+|+++. ++..+...+
T Consensus 184 ~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 184 HCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 3334443344679999995 999999999999 577752221 122346788775 566666655
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.79 E-value=7.4e-05 Score=72.27 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=80.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCc--hh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP--RH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p--~~ 314 (608)
++.+++.+.++.|+ .|+++.++|+..........+..|+......++ +...| +-
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~-----------------------~~~kp~~~~ 167 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIE-----------------------VVSEKDPQT 167 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEE-----------------------EESCCSHHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceee-----------------------eeCCCCHHH
Confidence 45799999999999 999999999999888888888888865433322 21112 22
Q ss_pred HHHHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCeeEEeCCCCcH--------HHHhccCE-EEecCCcchHHHHHH
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGV-NDGVALKKADIGIAMGKQGTD--------VCKEAADM-ILVDDDFNTIIAAIE 380 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vgia~~~~~~~--------~a~~~ad~-v~~~~~~~~i~~~i~ 380 (608)
-..+.+.+.-....++++||+. ||+.|.+.||+++++-..+.. .....+|+ ++. ++..+..+++
T Consensus 168 ~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 241 (251)
T 2pke_A 168 YARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHHH
T ss_pred HHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHHH
Confidence 2233344443446799999999 999999999999876423321 11245787 664 6777776664
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.78 E-value=2e-05 Score=72.95 Aligned_cols=90 Identities=18% Similarity=0.096 Sum_probs=66.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDG-QETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.++++.|+++|+++.++||.+ ...+..+.+.+|+......+. ..+..|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~-------------------------~~~~~k 122 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHRE-------------------------IYPGSK 122 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEE-------------------------ESSSCH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeE-------------------------EEeCch
Confidence 578999999999999999999999999 789999999999875432210 112233
Q ss_pred HHHHH-HHHHC---CCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 316 LTIVK-AFQAN---GVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 316 ~~~v~-~l~~~---g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
.+..+ .+++. ...++++||+.+|+.+.+.||+....
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~ 162 (187)
T 2wm8_A 123 ITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIH 162 (187)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEE
Confidence 33332 23332 35689999999999999999976443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.71 E-value=1.3e-05 Score=69.69 Aligned_cols=99 Identities=11% Similarity=0.041 Sum_probs=68.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+.+...+..+.+.+|+......++.+.+..... ..|+--.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~K----------------p~~~~~~ 81 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEK----------------PEEAAFQ 81 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCT----------------TSHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCC----------------CCHHHHH
Confidence 366889999999999999999999998888888888888876555555444322110 0111111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
.+.+.+.-....+.++||+.+|+.+.+.+|+....
T Consensus 82 ~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~ 116 (137)
T 2pr7_A 82 AAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVY 116 (137)
T ss_dssp HHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEE
Confidence 22222222234689999999999999999975443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.65 E-value=6e-05 Score=71.56 Aligned_cols=119 Identities=13% Similarity=0.192 Sum_probs=77.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++. +++.++|+.+.. .+.+|+......+++++...... ..|+--.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~k----------------p~~~~~~ 162 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIGK----------------PDPAPFL 162 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCCT----------------TSHHHHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCCC----------------cCHHHHH
Confidence 4678999999999998 999999987654 34566655444444443322110 0111122
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCeeEEe---CCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKADIGIAM---GKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vgia~---~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.+.+.+.-....++++||+. ||+.|.+.||++.++ +.+..+. +..+|+++. ++..+.+.++
T Consensus 163 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 163 EALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 33333333346799999998 999999999998877 2122222 567888885 6777777663
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.61 E-value=5e-06 Score=77.77 Aligned_cols=100 Identities=12% Similarity=0.093 Sum_probs=61.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-cCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM-VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|++.|+++.++|+.+......+.+. .|+......++++++.... ...|+--
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~----------------Kp~~~~~ 154 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMR----------------KPEARIY 154 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCC----------------TTCHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCC----------------CCCHHHH
Confidence 3579999999999999999999998765443222222 2322212222222221100 0112222
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
..+.+.+.-....++++||+.||+.|.+.||+...+.
T Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 155 QHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence 2344444434567999999999999999999988876
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00016 Score=70.75 Aligned_cols=43 Identities=16% Similarity=0.116 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHcCCCCC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTG---DGQETATAIASMVGLDTI 279 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~~~ 279 (608)
.+-+++.++|++++++|++++++|| +.........+++|+...
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 3457899999999999999999988 778888888888898643
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=75.70 Aligned_cols=135 Identities=14% Similarity=0.162 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
++.|++.++++.|+++|+++.++|+.+...+..+.+..|+..... .++++++.... .+......-.....|+-
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-----~~~~~~~kp~~KP~P~~ 289 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-----ENMYPQARPLGKPNPFS 289 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-----HHHSTTSCCCCTTSTHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc-----ccccccccCCCCCCHHH
Confidence 578999999999999999999999999999999999999987655 56666654210 00000000000011211
Q ss_pred HHHHHHHHH--------------HCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCc------HH-HHhccCEEEecCCc
Q psy16789 315 KLTIVKAFQ--------------ANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGT------DV-CKEAADMILVDDDF 372 (608)
Q Consensus 315 K~~~v~~l~--------------~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~------~~-a~~~ad~v~~~~~~ 372 (608)
=..+.+.+. -....++++||+.+|+.+-++||+. |++. .+. +. ....+|+++. ++
T Consensus 290 ~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~--sl 366 (384)
T 1qyi_A 290 YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVIN--HL 366 (384)
T ss_dssp HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEES--SG
T ss_pred HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEEC--CH
Confidence 111111111 1236699999999999999999965 3333 221 12 2346888885 56
Q ss_pred chHHHHH
Q psy16789 373 NTIIAAI 379 (608)
Q Consensus 373 ~~i~~~i 379 (608)
..+...+
T Consensus 367 ~eL~~~l 373 (384)
T 1qyi_A 367 GELRGVL 373 (384)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 6666655
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=72.08 Aligned_cols=46 Identities=20% Similarity=0.198 Sum_probs=38.1
Q ss_pred ecCCCChhHHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHcCCCCC
Q psy16789 234 ICDPPRPHVRECMSTLLQSGVKVKLVTG---DGQETATAIASMVGLDTI 279 (608)
Q Consensus 234 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~~~ 279 (608)
-.+.+-+++.++|++++++|++++++|| ++........+.+|+...
T Consensus 21 ~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 21 KSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp ETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 3455668899999999999999999999 677777777888888643
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.56 E-value=4.3e-05 Score=72.87 Aligned_cols=104 Identities=7% Similarity=-0.030 Sum_probs=70.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH------HHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA------SMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia------~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
++.+++.+.++.|++. +++.++|+.+......+. +..|+....+.++.+++..... .
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~K----------------P 174 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAK----------------P 174 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCT----------------T
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCC----------------C
Confidence 3569999999999999 999999999988887666 4455544333344333322111 1
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHH
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDV 358 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~ 358 (608)
.|+--..+.+.+.-....++++||+.||+.+.+.||++.++. +..+.
T Consensus 175 ~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~~~~ 221 (229)
T 4dcc_A 175 EPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP-KAGED 221 (229)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTTCC
T ss_pred CHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEE-CCHHH
Confidence 122222444444444567999999999999999999998887 44333
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00016 Score=70.05 Aligned_cols=113 Identities=12% Similarity=0.191 Sum_probs=82.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.|++.|+++.+.|+... +..+.+.+|+....+.++++++.....+ .|+-=
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~Fd~i~~~~~~~~~KP----------------~p~~~ 176 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKFDFIADAGKCKNNKP----------------HPEIF 176 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGCSEECCGGGCCSCTT----------------SSHHH
T ss_pred cccchhHHHHHHHHHhcccccccccccch--hhhHhhhcccccccceeecccccCCCCC----------------cHHHH
Confidence 34678999999999999999998877643 5567788999888777887776643221 24433
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeCCCCcHHHHhccCEEEec
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMGKQGTDVCKEAADMILVD 369 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~~~~~~~a~~~ad~v~~~ 369 (608)
..+.+.+.-....++++||+.+|+.+-+.||+ .|+++ +..+. ..||+++.+
T Consensus 177 ~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~~--~~ad~vi~~ 228 (250)
T 4gib_A 177 LMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYENL--KKANLVVDS 228 (250)
T ss_dssp HHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTTT--TTSSEEESS
T ss_pred HHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhHh--ccCCEEECC
Confidence 44555555455679999999999999999997 55665 33222 368998864
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.55 E-value=2.5e-05 Score=74.23 Aligned_cols=103 Identities=15% Similarity=0.062 Sum_probs=63.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHcCCCCCCCccccchhh-cccCHHHHHH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQ---------------ETATAIASMVGLDTIHGKVLSGDQI-DQMTEHQLQQ 299 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~-~~~~~~~~~~ 299 (608)
.++.+++.+++++|+++|+++.++|+... .......+.+|+.-. ......... .... +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~~~~g~~~--~--- 128 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD-MVLACAYHEAGVGP--L--- 128 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCCTTCCST--T---
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee-eEEEeecCCCCcee--e---
Confidence 46789999999999999999999999987 677778888887411 101110000 0000 0
Q ss_pred HhhcceEEEEeCchhHHHHH----HHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 300 VVNSVTVFYRVTPRHKLTIV----KAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 300 ~~~~~~v~~r~~p~~K~~~v----~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
. .. .+ ...+.+..+. +.+.-....++|+||+.||+.+.+.||+..
T Consensus 129 ~-~~-~~---~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 129 A-IP-DH---PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp C-CS-SC---TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred c-cc-CC---ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 0 00 00 0011122233 333323456999999999999999999764
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.50 E-value=5.3e-05 Score=86.56 Aligned_cols=79 Identities=11% Similarity=0.085 Sum_probs=60.5
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF 115 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~ 115 (608)
.+++..+++||+.. .|||+|.|++.++.+. .+.++.+++++++||+|++|+|++.++..+|. .+.+
T Consensus 356 ~~ll~~aa~~~~~~------~~~p~~~Al~~~~~~~--~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~------~~~~ 421 (885)
T 3b8c_A 356 DQVLLFAAMASRVE------NQDAIDAAMVGMLADP--KEARAGIREVHFLPFNPVDKRTALTYIDGSGN------WHRV 421 (885)
T ss_dssp HHHHHHHHHHCCSS------SCCSHHHHHHHTTCCT--TCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSC------BCBC
T ss_pred HHHHHHHHHHhCCC------CCCchHHHHHHHhhch--hhHhhcCceeecccCCcccceEEEEEEecCCc------EEEE
Confidence 46788888998642 3899999999876431 22345678899999999999999888754432 4678
Q ss_pred ccchhh-hhccccc
Q psy16789 116 LHRLLE-VGCVCNN 128 (608)
Q Consensus 116 ~kg~~e-i~~lc~~ 128 (608)
+||++| ++..|+.
T Consensus 422 ~KGa~e~il~~c~~ 435 (885)
T 3b8c_A 422 SKGAPEQILELAKA 435 (885)
T ss_dssp CCCSGGGTSSSSCC
T ss_pred EeCCHHHHHHhccC
Confidence 899999 8899974
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00018 Score=67.13 Aligned_cols=92 Identities=11% Similarity=0.068 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++||.....+..+.. .....++++++..... ..|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-----~~~d~v~~~~~~~~~K----------------P~p~--- 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-----PVNDWMIAAPRPTAGW----------------PQPD--- 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-----TTTTTCEECCCCSSCT----------------TSTH---
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-----ccCCEEEECCcCCCCC----------------CChH---
Confidence 467999999999999999999999998887755443 1122344333321110 1122
Q ss_pred HHHHHHHHCC----CEEEEEcCCcCcHHHHHhCCe-eEEeC
Q psy16789 317 TIVKAFQANG----VIVGMTGDGVNDGVALKKADI-GIAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g----~~v~~~GDg~ND~~al~~A~v-gia~~ 352 (608)
-+.+.+++.| ..++|+||+.+|+.+-+.||+ .|++.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 2233334332 568999999999999999996 34443
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00022 Score=69.05 Aligned_cols=49 Identities=20% Similarity=0.161 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHCCCEEEEEcC----CcCcHHHHHhCC-eeEEeCCCCcHHHHhcc
Q psy16789 314 HKLTIVKAFQANGVIVGMTGD----GVNDGVALKKAD-IGIAMGKQGTDVCKEAA 363 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GD----g~ND~~al~~A~-vgia~~~~~~~~a~~~a 363 (608)
.|...++.+.+....++++|| |.||.+||+.|+ +|++++ |+.+..|..+
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~ 240 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVE 240 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHH
Confidence 555555555544567999999 699999999996 899998 8887777544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00015 Score=71.05 Aligned_cols=57 Identities=12% Similarity=0.181 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHC--CCEEEEEcC----CcCcHHHHHhCC-eeEEeCCCCcHHHHhccCEEEecCC
Q psy16789 313 RHKLTIVKAFQAN--GVIVGMTGD----GVNDGVALKKAD-IGIAMGKQGTDVCKEAADMILVDDD 371 (608)
Q Consensus 313 ~~K~~~v~~l~~~--g~~v~~~GD----g~ND~~al~~A~-vgia~~~~~~~~a~~~ad~v~~~~~ 371 (608)
..|...++.+ .. ...|+++|| +.||.+||+.|+ +|++|+ |+.+.+|+.||+++.+++
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCc
Confidence 3688888888 22 467999999 999999999999 699998 999999999999886654
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00037 Score=65.87 Aligned_cols=95 Identities=14% Similarity=0.111 Sum_probs=63.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+. .+..+.+.+|+....+.++.+++.... ...|+--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~----------------Kp~~~~~~ 157 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAV----------------KPNPKIFG 157 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC---------------------------CCHHH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCC----------------CCCHHHHH
Confidence 3569999999999999999999999876 467888889987665555554433211 11132222
Q ss_pred HHHHHHHHCCCEEEEEcCCcC-cHHHHHhCCeeEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVN-DGVALKKADIGIAM 351 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~N-D~~al~~A~vgia~ 351 (608)
.+.+.+.- .. +++||+.+ |+.+.+.||+....
T Consensus 158 ~~~~~~~~--~~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 158 FALAKVGY--PA-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHCS--SE-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHcCC--Ce-EEEcCCchHhHHHHHHCCCeEEE
Confidence 33333322 22 89999999 99999999987654
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00094 Score=65.26 Aligned_cols=44 Identities=20% Similarity=0.210 Sum_probs=38.3
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHcCCCC
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVT---GDGQETATAIASMVGLDT 278 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~~gi~~ 278 (608)
.+++-+++.+++++++++|++++++| |+.........+.+|+..
T Consensus 31 ~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 31 DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 35567889999999999999999999 889888888888888864
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0015 Score=62.75 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=78.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+... +..+.+.+|+......++++++.....+ .|+-=.
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~KP----------------~p~~~~ 156 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKNSKP----------------DPEIFL 156 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSSCTT----------------STHHHH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccCCCC----------------cHHHHH
Confidence 4679999999999999999999998754 4566788999887777777776644221 133333
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeCCCCcHHHHhccCEEEec
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMGKQGTDVCKEAADMILVD 369 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~~~~~~~a~~~ad~v~~~ 369 (608)
.+.+.+.-....++++||+.+|+.+-++||+ .|++. .|. ..+|.++.+
T Consensus 157 ~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 157 AACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLPS 205 (243)
T ss_dssp HHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEESS
T ss_pred HHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcCC
Confidence 4455555556779999999999999999995 34444 331 245665543
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.001 Score=64.25 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=63.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHcCCCCCCC-ccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQ----ETATAIASMVGLDTIHG-KVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~ta~~ia~~~gi~~~~~-~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
.++.+++.+.++.|+++|+++.++||++. ..+....+.+|+..... . ++.+.
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~-----------------------Lilr~ 156 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKT-----------------------LLLKK 156 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTT-----------------------EEEES
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccce-----------------------eEecC
Confidence 45789999999999999999999999975 46677778889975321 1 33333
Q ss_pred CchhHHHHHHHHHHCCC-EEEEEcCCcCcHHH
Q psy16789 311 TPRHKLTIVKAFQANGV-IVGMTGDGVNDGVA 341 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~-~v~~~GDg~ND~~a 341 (608)
....|....+.+.+.|+ .|+++||..+|.++
T Consensus 157 ~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 157 DKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred CCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 34568888888887554 56779999999986
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00084 Score=65.50 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=37.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHcCCCCC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVT---GDGQETATAIASMVGLDTI 279 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~~gi~~~ 279 (608)
+..-+++.++|++++++|++++++| |+.........+++|+...
T Consensus 20 ~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 20 KSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 3333899999999999999999999 8888888888899998654
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00025 Score=64.79 Aligned_cols=96 Identities=17% Similarity=0.132 Sum_probs=62.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHcCCCCCCCccc-cc----hhhcccCHHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD---------------GQETATAIASMVGLDTIHGKVL-SG----DQIDQMTEHQ 296 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~vi-~g----~~~~~~~~~~ 296 (608)
++.+++.++++.|+++|+++.++|+. ....+..+.+..|+. ...++ ++ ++.....
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~K--- 116 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRK--- 116 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSST---
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccC---
Confidence 47799999999999999999999998 566777888888886 22232 21 1111100
Q ss_pred HHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 297 LQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 297 ~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..|+-=..+.+.+.-....++++||+.+|+.+.+.||+...
T Consensus 117 -------------P~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i 157 (176)
T 2fpr_A 117 -------------PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGL 157 (176)
T ss_dssp -------------TSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEE
T ss_pred -------------CCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEE
Confidence 01111112223333334568999999999999999998643
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0019 Score=62.89 Aligned_cols=114 Identities=11% Similarity=0.100 Sum_probs=75.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc---CCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV---GLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~---gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
++.+++.++++.|+++|+++.++|+.+...+..+.+.. |+......++++ +.. .. ..|+
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~K----------------P~p~ 191 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HK----------------VESE 191 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CT----------------TCHH
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CC----------------CCHH
Confidence 57899999999999999999999999988888777644 576655555544 332 11 1122
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCc---HHHHhccCEEEe
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGT---DVCKEAADMILV 368 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~---~~a~~~ad~v~~ 368 (608)
-=..+.+.+.-....++|+||+.+|+.+-++||+- |.+...+. +.....+|+++.
T Consensus 192 ~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 192 SYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 22234444444456799999999999999999964 33421121 122235676664
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0012 Score=65.72 Aligned_cols=96 Identities=19% Similarity=0.068 Sum_probs=66.7
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHH---HHHHHH--------cCCCCCCCccccchhhcccCHHHHHHHhhc
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETA---TAIASM--------VGLDTIHGKVLSGDQIDQMTEHQLQQVVNS 303 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta---~~ia~~--------~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 303 (608)
++++.+++.++++.|+++|+++.++||+....+ ....+. .|+. ...++.+++...
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~------------ 251 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQCQREQGDT------------ 251 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEEECCTTCC------------
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chheeeccCCCC------------
Confidence 567899999999999999999999999985432 333444 6882 334443332211
Q ss_pred ceEEEEeCchhHHHHHHHHHHCCCE-EEEEcCCcCcHHHHHhCCeeE
Q psy16789 304 VTVFYRVTPRHKLTIVKAFQANGVI-VGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 304 ~~v~~r~~p~~K~~~v~~l~~~g~~-v~~~GDg~ND~~al~~A~vgi 349 (608)
+..|+-+..+.+.+...... ++|+||..+|+.|-+.||+-.
T Consensus 252 -----kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 252 -----RKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp -----SCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred -----cHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 11255666666666444434 578999999999999999753
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.001 Score=64.30 Aligned_cols=83 Identities=17% Similarity=0.165 Sum_probs=63.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHcCCCCCCC-ccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQ----ETATAIASMVGLDTIHG-KVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~ta~~ia~~~gi~~~~~-~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
.++.|++.+.++.|+++|+++.++||++. ..+..-.+..|+..... . ++.|.
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~-----------------------Lilr~ 156 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESA-----------------------FYLKK 156 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGG-----------------------EEEES
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccc-----------------------eeccC
Confidence 56789999999999999999999999965 46667778899975321 2 33343
Q ss_pred CchhHHHHHHHHHHCCC-EEEEEcCCcCcHHH
Q psy16789 311 TPRHKLTIVKAFQANGV-IVGMTGDGVNDGVA 341 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~-~v~~~GDg~ND~~a 341 (608)
....|....+.+.+.|. .|+++||..+|.++
T Consensus 157 ~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 157 DKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred CCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 34567777778887754 56779999999985
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00027 Score=68.28 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=42.6
Q ss_pred hHHHHHHHH-HHCCCEEEEEcC----CcCcHHHHHhCCe-eEEeCCCCcHHHHhccCEE
Q psy16789 314 HKLTIVKAF-QANGVIVGMTGD----GVNDGVALKKADI-GIAMGKQGTDVCKEAADMI 366 (608)
Q Consensus 314 ~K~~~v~~l-~~~g~~v~~~GD----g~ND~~al~~A~v-gia~~~~~~~~a~~~ad~v 366 (608)
+|...++.+ .-....|+++|| +.||.+||+.|+. |++|+ |+.+.+|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 687777777 112468999999 9999999999998 99999 9999999999986
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.011 Score=57.17 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=36.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHcCCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVT---GDGQETATAIASMVGLDT 278 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~~gi~~ 278 (608)
+-+++.++++.+++.|+++.++| |+.........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 55788899999999999999999 999988888888888754
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.02 Score=54.95 Aligned_cols=45 Identities=18% Similarity=0.250 Sum_probs=33.5
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHcCCCCC
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVT---GDGQETATAIASMVGLDTI 279 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~~gi~~~ 279 (608)
.++.-+++.++++.++++|+++.++| |+.........+..|+...
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~ 68 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEIS 68 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCcc
Confidence 45555788999999999999999999 6666666666667787644
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0029 Score=60.12 Aligned_cols=114 Identities=11% Similarity=0.031 Sum_probs=72.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++| ++.++|+.+...+..+.+.+|+......+ +.. ...|.
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~----------------------~~~---~~~K~ 149 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGR----------------------VLI---YIHKE 149 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTC----------------------EEE---ESSGG
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCee----------------------EEe---cCChH
Confidence 56899999999999999 99999999888888888888875321111 111 11232
Q ss_pred HHHHHHHH--CCCEEEEEcCCcC---cHHHHHhCCee-EEeCCC----CcHHHHhc--cCEEEecCCcchHHHH
Q psy16789 317 TIVKAFQA--NGVIVGMTGDGVN---DGVALKKADIG-IAMGKQ----GTDVCKEA--ADMILVDDDFNTIIAA 378 (608)
Q Consensus 317 ~~v~~l~~--~g~~v~~~GDg~N---D~~al~~A~vg-ia~~~~----~~~~a~~~--ad~v~~~~~~~~i~~~ 378 (608)
...+.+.+ ....++++||+.+ |+.+-+.||+. +.+... ..+..++. +|+++. ++..+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~ 221 (231)
T 2p11_A 150 LMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEM 221 (231)
T ss_dssp GCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGC
T ss_pred HHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHH
Confidence 33333332 4568999999999 76777778854 333311 11233332 888875 45544433
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.00016 Score=69.34 Aligned_cols=55 Identities=18% Similarity=0.111 Sum_probs=36.8
Q ss_pred hHHHHHHHHHH----CCCEEEEEcCC-cCcHHHHHhCCeeEEe---CCCCc-HHHH---hccCEEEec
Q psy16789 314 HKLTIVKAFQA----NGVIVGMTGDG-VNDGVALKKADIGIAM---GKQGT-DVCK---EAADMILVD 369 (608)
Q Consensus 314 ~K~~~v~~l~~----~g~~v~~~GDg-~ND~~al~~A~vgia~---~~~~~-~~a~---~~ad~v~~~ 369 (608)
.|...++.+.+ ....++++||+ .||+.|++.||+++++ | +.. +..+ ..+|+++.+
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG-VSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSS-SCCGGGGSSCSSCCSEEESS
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCC-CCChhhhhhcCCCCCEEECC
Confidence 34455544433 24579999999 6999999999988554 3 333 3333 468888753
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0038 Score=60.64 Aligned_cols=83 Identities=14% Similarity=0.152 Sum_probs=54.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHcCCC--CCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDG---QETATAIASMVGLD--TIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~---~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
.++.+++.++++.|+++|+++.++||+. ........+.+|+. .....++.+++..
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~~-------------------- 159 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKEK-------------------- 159 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTCC--------------------
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCCC--------------------
Confidence 3567999999999999999999999998 44555566778987 3333333333210
Q ss_pred CchhHHHHHHHHHHCC-CEEEEEcCCcCcHHHH
Q psy16789 311 TPRHKLTIVKAFQANG-VIVGMTGDGVNDGVAL 342 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g-~~v~~~GDg~ND~~al 342 (608)
.|.. ...+.+.+ ..++|+||+.+|..+-
T Consensus 160 K~~~----~~~~~~~~~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 160 GKEK----RRELVSQTHDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp SSHH----HHHHHHHHEEEEEEEESSGGGSTTC
T ss_pred CcHH----HHHHHHhCCCceEEeCCCHHHhccc
Confidence 0111 11122222 3578899999999875
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0018 Score=57.56 Aligned_cols=127 Identities=11% Similarity=0.119 Sum_probs=72.9
Q ss_pred CCCCCccccceEEE---Eccchhh--hhccccceeeeccccCCCccHHHHHHHHHHc-Cccccccccc-cceeeeCChHH
Q psy16789 101 PKEGSSCDVDTRFF---FLHRLLE--VGCVCNNASIIGDSLLGQPTEGALLAAGMKF-GLYAVNEHYV-RLKEYPFSSEQ 173 (608)
Q Consensus 101 ~~~gt~~~~~~~~~---~~kg~~e--i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~-~~~~~~~~~~-~~~~~pF~s~~ 173 (608)
+..||+|-++..+. ...|..+ ++.++..+. .....|...|+++++++. ++.....+ + .....||++..
T Consensus 12 ~~~~tit~gnr~vt~v~~~~g~~e~elL~lAAs~E----~~SeHPla~AIv~~A~~~~~l~~~~~~-~~~~~~~~F~a~~ 86 (156)
T 1svj_A 12 HSSGHGGRHNRQASEFIPAQGVDEKTLADAAQLAS----LADETPEGRSIVILAKQRFNLRERDVQ-SLHATFVPFTAQS 86 (156)
T ss_dssp ---------CEEEEEEEECTTSCHHHHHHHHHHTT----SSCCSHHHHHHHHHHHHHTTCCCCCHH-HHTCEEEEEETTT
T ss_pred CCCCceecCCCeEEEEEecCCCCHHHHHHHHHHHh----CcCCCHHHHHHHHHHHHhcCCCccccc-ccccceeeccccC
Confidence 45688876655444 3455444 555443322 233589999999999976 55321100 0 22346888776
Q ss_pred HHHHhHhhhcCCcCCCCchhH---HHHh--------hhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCCh
Q psy16789 174 KMMAVRVHKIGHNLPSKRDGK---MILS--------QSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRP 240 (608)
Q Consensus 174 k~m~v~~~~~~~~~~~kg~~~---~~~~--------~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~ 240 (608)
++..+.+. .....+|+.. ..++ .+.+..++++.+|.+++.+|.. -.++|++++.|++|+
T Consensus 87 G~~Gv~v~---G~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d-----~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 87 RMSGINID---NRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEG-----SRVLGVIALKDIVKG 156 (156)
T ss_dssp TEEEEEET---TEEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEET-----TEEEEEEEEEECCCC
T ss_pred CCCeEEEC---CEEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEEC-----CEEEEEEEEecCCCC
Confidence 65555331 2234456643 1221 3455677889999999999974 479999999999986
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.023 Score=56.54 Aligned_cols=43 Identities=14% Similarity=0.209 Sum_probs=36.2
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHcCCC
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVT---GDGQETATAIASMVGLD 277 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~~gi~ 277 (608)
.+++-+++.+++++++++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45566889999999999999999999 57777777777788886
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.0049 Score=66.26 Aligned_cols=98 Identities=9% Similarity=0.068 Sum_probs=64.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC------cHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD------GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
++.+++.++++.|+++|+++.++|+. ......... .|+....+.++++++.....+
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~fd~i~~~~~~~~~KP---------------- 161 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMHFDFLIESCQVGMVKP---------------- 161 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTTSSEEEEHHHHTCCTT----------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhheeEEEeccccCCCCC----------------
Confidence 46799999999999999999999996 222222221 144444455666655533221
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
.|+--..+.+.+.-....++++||+.+|+.+.+.||+....-
T Consensus 162 ~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 162 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 122222344444444567899999999999999999877664
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.00 E-value=0.03 Score=56.18 Aligned_cols=113 Identities=17% Similarity=0.163 Sum_probs=69.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc----CCCCCCCccccchhhccc--------C-HHHHHH---
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV----GLDTIHGKVLSGDQIDQM--------T-EHQLQQ--- 299 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~----gi~~~~~~vi~g~~~~~~--------~-~~~~~~--- 299 (608)
..+.++..+.++.++++|++|+++||-.....+.+|..+ ||... .|+.. .+... . ..+..+
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e--~ViG~-~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE--NVIGV-TTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG--GEEEE-CEEEECTTTCCEECHHHHHHTTCC
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH--HeEee-eeeeeccccccccccccccccccc
Confidence 346799999999999999999999999999999999984 56543 23321 11100 0 001100
Q ss_pred ---HhhcceEEEEe-----CchhHHHHHHHHHHCC-CEEEEEcCCc-CcHHHHHh--CCeeEEe
Q psy16789 300 ---VVNSVTVFYRV-----TPRHKLTIVKAFQANG-VIVGMTGDGV-NDGVALKK--ADIGIAM 351 (608)
Q Consensus 300 ---~~~~~~v~~r~-----~p~~K~~~v~~l~~~g-~~v~~~GDg~-ND~~al~~--A~vgia~ 351 (608)
......+-.+. --+.|...++.....| .-+++.||+. .|.+||.. ++.|+.+
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 00011111111 1346777777655444 4588999995 79999965 3344443
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=94.82 E-value=0.0046 Score=58.11 Aligned_cols=87 Identities=17% Similarity=0.197 Sum_probs=53.9
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHH----HHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE--eC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATA----IASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR--VT 311 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~----ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r--~~ 311 (608)
+.+++.+.++.|+++|+++.++|+.+...+.. +....+... .+.... .+.. ..
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~------~~~~~~---------------~~~~~KP~ 147 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA------TNMNPV---------------IFAGDKPG 147 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT------TTBCCC---------------EECCCCTT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc------cccchh---------------hhcCCCCC
Confidence 46799999999999999999999986433222 222222210 000000 0111 12
Q ss_pred chhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 312 PRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 312 p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
|+-. .+.+++.|. ++++||+.+|+.+-+.||+..
T Consensus 148 p~~~---~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 148 QNTK---SQWLQDKNI-RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp CCCS---HHHHHHTTE-EEEEESSHHHHHHHHHTTCEE
T ss_pred HHHH---HHHHHHCCC-EEEEECCHHHHHHHHHCCCeE
Confidence 3322 334455555 889999999999999999753
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.035 Score=57.87 Aligned_cols=92 Identities=13% Similarity=0.111 Sum_probs=59.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCc------------HHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcce
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDG------------QETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVT 305 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~------------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 305 (608)
+.+++.++++.|+++|+++.++|+.+ ...+..+.+.+|+. ...++.+++....
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~------------- 152 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNR------------- 152 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTS-------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCC-------------
Confidence 57999999999999999999999965 22366778888874 2233333322110
Q ss_pred EEEEeCchhHHHHHHHHHHCC-------CEEEEEcCCc-----------------CcHHHHHhCCeeEE
Q psy16789 306 VFYRVTPRHKLTIVKAFQANG-------VIVGMTGDGV-----------------NDGVALKKADIGIA 350 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~~~g-------~~v~~~GDg~-----------------ND~~al~~A~vgia 350 (608)
-|.. .-+...+++.| ..++|+||.. +|..+-+.||+-..
T Consensus 153 -----KP~p-~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~ 215 (416)
T 3zvl_A 153 -----KPVS-GMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 215 (416)
T ss_dssp -----TTSS-HHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE
T ss_pred -----CCCH-HHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc
Confidence 0111 12222333333 4689999997 68888887877655
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.93 E-value=0.044 Score=52.87 Aligned_cols=44 Identities=14% Similarity=0.262 Sum_probs=33.5
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----cCCCC
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM----VGLDT 278 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----~gi~~ 278 (608)
.++.-+++.++++.+++.|+++.++||+...+...+.+. +|+..
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 344447899999999999999999999976555555443 77754
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=92.66 E-value=0.0021 Score=59.43 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=34.6
Q ss_pred CCCChhHHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHcCC
Q psy16789 236 DPPRPHVRECMSTLLQS-GVKVKLVTGDGQETATAIASMVGL 276 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~~gi 276 (608)
-++.+++.+.++.|+++ |+++.++|+.+...+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 35679999999999999 999999999987776666666666
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=92.07 E-value=0.21 Score=43.20 Aligned_cols=41 Identities=20% Similarity=0.166 Sum_probs=34.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHcCCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDG---QETATAIASMVGLDT 278 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~---~~ta~~ia~~~gi~~ 278 (608)
+.+++.++|++++++|++++++|||+ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 34689999999999999999999998 556667777888754
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=91.55 E-value=0.25 Score=47.49 Aligned_cols=92 Identities=11% Similarity=0.078 Sum_probs=58.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc--C---------CCCCCCccccchhhcccCHHHHHHHhhcce
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV--G---------LDTIHGKVLSGDQIDQMTEHQLQQVVNSVT 305 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~--g---------i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 305 (608)
++.+++.+.++. |+++.++|+.+...+..+.+.. | +........+. .. ..
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~------------~g-- 185 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NT------------SG-- 185 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HH------------HC--
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee-ec------------cC--
Confidence 567898888888 9999999999999888877766 4 22111111100 00 00
Q ss_pred EEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 306 VFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
....|+-=..+.+.+.-....++++||+.+|+.+-++||+-.
T Consensus 186 --~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 186 --KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp --CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred --CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 011122222344444444567999999999999999999643
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=91.14 E-value=0.55 Score=42.09 Aligned_cols=101 Identities=11% Similarity=0.063 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC---cH---HHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD---GQ---ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---~~---~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
++.|++.+.++.|++. +++.++|+. .. .+...+.+..+.......++++++
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~---------------------- 125 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK---------------------- 125 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG----------------------
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc----------------------
Confidence 5789999999999984 999999998 21 112234444555443334444332
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+ + ..++++||+.+++. +.|+-.|++. .+... ...+++++. ++..+...+
T Consensus 126 ---~~------l----~~~l~ieDs~~~i~--~aaG~~i~~~-~~~~~-~~~~~~~i~--~~~el~~~l 175 (180)
T 3bwv_A 126 ---NI------I----LADYLIDDNPKQLE--IFEGKSIMFT-ASHNV-YEHRFERVS--GWRDVKNYF 175 (180)
T ss_dssp ---GG------B----CCSEEEESCHHHHH--HCSSEEEEEC-CGGGT-TCCSSEEEC--SHHHHHHHH
T ss_pred ---Ce------e----cccEEecCCcchHH--HhCCCeEEeC-CCccc-CCCCceecC--CHHHHHHHH
Confidence 01 0 34689999999985 4577666664 22221 134566553 455555444
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.01 E-value=0.075 Score=48.99 Aligned_cols=91 Identities=15% Similarity=0.097 Sum_probs=67.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
.+||++.+.++.+++. +++++.|......|..+.+.+++......++.+++.... |.
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~----------------------k~ 124 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFH----------------------RG 124 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEE----------------------TT
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceec----------------------CC
Confidence 4689999999999998 999999999999999999999997654555555543221 11
Q ss_pred HHHHHHHH---CCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 317 TIVKAFQA---NGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 317 ~~v~~l~~---~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..++.++. .-..|++++|..++..+-+.+++-|.
T Consensus 125 ~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 125 NYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp EEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred ceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 11222222 23569999999999988777766654
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=89.58 E-value=0.073 Score=48.42 Aligned_cols=91 Identities=16% Similarity=0.083 Sum_probs=65.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
.+||++.+.++.+++. +++++.|......|..+.+.++.......++.+++.... |.
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~----------------------k~ 111 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH----------------------RG 111 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEE----------------------TT
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceec----------------------CC
Confidence 4699999999999998 999999999999999999999987644444544443211 11
Q ss_pred HHHHHHHH---CCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 317 TIVKAFQA---NGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 317 ~~v~~l~~---~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..++.++. .-..+.++||..++..+-..+++-|.
T Consensus 112 ~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 112 NYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp EEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred cEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEec
Confidence 11222222 23569999999999987776766653
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=83.09 E-value=0.062 Score=51.93 Aligned_cols=50 Identities=24% Similarity=0.274 Sum_probs=32.5
Q ss_pred CCCEEEEEcCCc-CcHHHHHhCCee-EEeCC-CCc-HHHHh---ccCEEEecCCcchHH
Q psy16789 325 NGVIVGMTGDGV-NDGVALKKADIG-IAMGK-QGT-DVCKE---AADMILVDDDFNTII 376 (608)
Q Consensus 325 ~g~~v~~~GDg~-ND~~al~~A~vg-ia~~~-~~~-~~a~~---~ad~v~~~~~~~~i~ 376 (608)
....++|+||+. +|+.+-+.||+. +.+.. ... +...+ .+|+++. ++..+.
T Consensus 201 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~--~l~el~ 257 (263)
T 1zjj_A 201 PGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLP--SVYELI 257 (263)
T ss_dssp TTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEES--SGGGGG
T ss_pred CcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEEC--CHHHHH
Confidence 467899999995 999999999964 44431 111 22222 5788775 444443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 608 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-46 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-37 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-24 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 0.003 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 2e-23 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 3e-20 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-14 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 9e-09 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-08 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-08 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 6e-08 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 6e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-07 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 3e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 5e-05 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 5e-05 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 5e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 9e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 3e-04 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 167 bits (423), Expect = 5e-46
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 31/249 (12%)
Query: 373 NTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMD 432
++ + G+ I+ N++ F+R+ +S+++ + I L L +P L +Q+LW+N++ D
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 278
Query: 433 GPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVF-------- 484
G PA +LG P D D+ + PR+ KEP+I+ L + + T+
Sbjct: 279 GLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAE 338
Query: 485 -----------------------KREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIK 521
+ + + TM + V +M NAL+ S+ +
Sbjct: 339 DGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQ 398
Query: 522 SVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFV 581
S+ + + N L ++C S+ ++Y PL +F+ +AL + + ++ V +
Sbjct: 399 SLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGL 458
Query: 582 SEIKKAIER 590
EI K I R
Sbjct: 459 DEILKFIAR 467
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 134 bits (338), Expect = 2e-37
Identities = 64/162 (39%), Positives = 91/162 (56%), Gaps = 5/162 (3%)
Query: 225 DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT----IH 280
D DPPR V + +G++V ++TGD + TA AI +G+ +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 281 GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGV 340
+ +G + D + + ++ F RV P HK IV+ Q+ I MTGDGVND
Sbjct: 68 DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 127
Query: 341 ALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382
ALKKA+IGIAMG GT V K A++M+L DD+F+TI+AA+EEG
Sbjct: 128 ALKKAEIGIAMGS-GTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 104 bits (259), Expect = 1e-24
Identities = 37/301 (12%), Positives = 81/301 (26%), Gaps = 43/301 (14%)
Query: 119 LLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLY--AVNEHYVRLKEYPFSSEQKMM 176
+L + + I+ L A + L ++ + + +
Sbjct: 80 MLFIVFSIHLIDIL--KKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFL 137
Query: 177 AVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLG-------KGLVAMARGSNL------ 223
V +N+ + + S+ F G + GS L
Sbjct: 138 DN-VKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK 196
Query: 224 ---QDLCYMGLVGICDP--PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278
+ G + P V+ ++ L +G ++ + TG +GL
Sbjct: 197 KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256
Query: 279 IHGK--VLSGDQIDQMTEHQLQQ---------VVNSVTVFYRVTPRHKLTIVKAFQANGV 327
+ + + + Q + + N
Sbjct: 257 YFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKD 316
Query: 328 IVGMTGDGVNDGVALKKAD---IGIAMGKQGTDVCKE----AADMILVDDDFNTIIAAIE 380
V + GD + D ++ +K IG G +G D E AD ++ + + ++
Sbjct: 317 DVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVLD 374
Query: 381 E 381
Sbjct: 375 N 375
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 37.9 bits (87), Expect = 0.003
Identities = 6/74 (8%), Positives = 18/74 (24%), Gaps = 4/74 (5%)
Query: 38 LLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLY--AVNEHYVRLKEYPFSSEQKMM 95
+L + + I+ L A + L ++ + + +
Sbjct: 80 MLFIVFSIHLIDIL--KKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFL 137
Query: 96 AVRCIPKEGSSCDV 109
+ K +
Sbjct: 138 DNVKVGKNNIYAAL 151
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 94.0 bits (233), Expect = 2e-23
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 225 DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVL 284
D G D + + + L + G+KV ++TGD +A AI+ + LD +
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI---- 64
Query: 285 SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKK 344
V P K VK QA V V GDG+ND AL +
Sbjct: 65 -----------------------AEVLPHQKSEEVKKLQAKEV-VAFVGDGINDAPALAQ 100
Query: 345 ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380
AD+GIA+G G+DV E+ D++L+ DD ++AAI+
Sbjct: 101 ADLGIAVGS-GSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 87.7 bits (216), Expect = 3e-20
Identities = 27/198 (13%), Positives = 59/198 (29%), Gaps = 6/198 (3%)
Query: 194 KMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSG 253
+ S+ + + + S +++ L R RE ++ + +
Sbjct: 34 MALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAK--IREGFREFVAFINEHE 91
Query: 254 VKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313
+ +++G + + + + +
Sbjct: 92 IPFYVISGGMDFFVYPLLEGIVEKDR---IYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 148
Query: 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFN 373
K +++ + M GD V D A K +D+ A + C+E L DF
Sbjct: 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY-LLNECREQNLNHLPYQDFY 207
Query: 374 TIIAAIEEGKGIFYNIRN 391
I IE K + ++N
Sbjct: 208 EIRKEIENVKEVQEWLQN 225
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 69.5 bits (169), Expect = 4e-14
Identities = 26/180 (14%), Positives = 45/180 (25%), Gaps = 54/180 (30%)
Query: 116 LHRLLEVGCVCNNA---------SIIGDSLLGQPTEGALLAAGMKFGLY--AVNEHYVRL 164
L + +CN A S+ G +E ALL + + ++
Sbjct: 34 WTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKV 93
Query: 165 KEYPFSSEQKMMAVRVHKIGH---------NLPSK---------RDGKMILSQSCSEYPK 206
E F+S K + + P + GK I +
Sbjct: 94 AEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAF 153
Query: 207 FQTL----GKGLVAMA---------------------RGSNLQDLCYMGLVGICDPPRPH 241
G G + + LC++GL+ + D H
Sbjct: 154 QNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 58.7 bits (141), Expect = 2e-10
Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 11/99 (11%)
Query: 20 HGDGRNSSRIRSKPETGTLLEVGCVCNNA---------SIIGDSLLGQPTEGALLAAGMK 70
D ++ + P L + +CN A S+ G +E ALL
Sbjct: 19 TEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIEL 78
Query: 71 FGLY--AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSC 107
+ + ++ E F+S K ++
Sbjct: 79 SCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQS 117
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (128), Expect = 9e-09
Identities = 28/147 (19%), Positives = 46/147 (31%), Gaps = 15/147 (10%)
Query: 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVG--LDTIHGKVLSGDQIDQM 292
P +RE +S L + V+V L++G + +AS + + L +
Sbjct: 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEY 139
Query: 293 TEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVG--MTGDGVNDGVALKKADIGIA 350
K ++K + M GDG D A AD I
Sbjct: 140 AGF--------DETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIG 191
Query: 351 MG-KQGTDVCKEAADMILVDDDFNTII 376
G K+ A + DF ++
Sbjct: 192 FGGNVIRQQVKDNAKWYI--TDFVELL 216
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 53.3 bits (127), Expect = 1e-08
Identities = 34/192 (17%), Positives = 63/192 (32%), Gaps = 16/192 (8%)
Query: 190 KRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTL 249
++ G L + + P + L K + + L+ I
Sbjct: 23 EKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQ--EVIATLKPLEGAVEFVDW 80
Query: 250 LQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR 309
L+ +V +++ E + + +G T+ L D D++ +QL+Q
Sbjct: 81 LRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQ---------- 130
Query: 310 VTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVD 369
K V AF++ V GD ND L +A GI +V +E V
Sbjct: 131 --KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV- 186
Query: 370 DDFNTIIAAIEE 381
+ + +
Sbjct: 187 HTYEDLKREFLK 198
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 53.3 bits (126), Expect = 1e-08
Identities = 32/146 (21%), Positives = 46/146 (31%), Gaps = 8/146 (5%)
Query: 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTE 294
P E + L G V +V+G I +GLD L +
Sbjct: 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD 132
Query: 295 HQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQ 354
+ + + I K N GDG ND KKA + IA
Sbjct: 133 VEGEVL------KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-- 184
Query: 355 GTDVCKEAADMILVDDDFNTIIAAIE 380
+ KE AD+ + D I+ I+
Sbjct: 185 AKPILKEKADICIEKRDLREILKYIK 210
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 51.8 bits (123), Expect = 6e-08
Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 24/101 (23%)
Query: 38 LLEVGCVCNNASIIGDS------LLGQPTEGALLAAGMKFGLY----------------- 74
L + +CN++S+ + +G+ TE AL K ++
Sbjct: 53 LATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACN 112
Query: 75 -AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFF 114
+ + + FS ++K M+V C P + S V + F
Sbjct: 113 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMF 153
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 51.4 bits (122), Expect = 6e-08
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 24/95 (25%)
Query: 116 LHRLLEVGCVCNNASIIGDS------LLGQPTEGALLAAGMKFGLY-------------- 155
L L + +CN++S+ + +G+ TE AL K ++
Sbjct: 50 LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERAN 109
Query: 156 ----AVNEHYVRLKEYPFSSEQKMMAVRVHKIGHN 186
+ + + FS ++K M+V +
Sbjct: 110 ACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 50.0 bits (118), Expect = 2e-07
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 329 VGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381
V GDG ND A K +A+ Q + KE AD + + AI
Sbjct: 171 VAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 44.6 bits (104), Expect = 1e-05
Identities = 9/53 (16%), Positives = 15/53 (28%), Gaps = 1/53 (1%)
Query: 329 VGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381
+ + GD ND + TD K +D + I +
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 43.8 bits (102), Expect = 3e-05
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 333 GDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNF 392
GD ND LK A AMG + K+ A D++ + I+ + N F
Sbjct: 213 GDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA---VLDNTYPF 268
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 43.0 bits (100), Expect = 5e-05
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 333 GDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381
GD ND ++ A +G+A+ KE A+ + + + + AIE+
Sbjct: 220 GDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 267
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 43.0 bits (100), Expect = 5e-05
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 279 IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP--RHKLTIVKAFQANGVI----VGMT 332
+ + ++ + + ++ F VT K + + I
Sbjct: 149 MTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSF 208
Query: 333 GDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381
GDG ND L+ A IG+AMG Q + K AAD + D + I A++
Sbjct: 209 GDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 42.0 bits (98), Expect = 5e-05
Identities = 15/116 (12%), Positives = 27/116 (23%), Gaps = 7/116 (6%)
Query: 258 LVTGDGQETAT----AIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313
+G+ + + L +V D + + F +
Sbjct: 22 HYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEK 81
Query: 314 HK--LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMIL 367
++K GD D A A+ K A D +L
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVL 136
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 42.2 bits (98), Expect = 9e-05
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 333 GDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381
GD +ND L+ A G+AMG + K AD + + +D + + ++
Sbjct: 236 GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 41.1 bits (95), Expect = 2e-04
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 329 VGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381
V + GD ND L A+ TD K A +L +A + +
Sbjct: 226 VLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 333 GDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381
GD ND ++A + +AM + KEA+D++ + ++ + + +E
Sbjct: 213 GDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLER 260
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 608 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.9 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.87 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.86 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.37 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.31 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.31 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.25 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.21 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.16 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.12 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.12 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.07 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.06 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.01 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.0 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.89 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.87 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.87 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.87 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.83 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.68 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.23 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.22 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.21 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.17 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.11 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.98 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.77 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.63 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.53 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.49 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.43 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.42 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.36 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.28 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.24 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.18 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.04 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 97.02 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.82 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.61 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.48 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 96.38 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 96.08 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.98 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.92 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.75 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.73 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 95.56 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.51 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.09 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.48 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 94.24 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 93.31 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 93.17 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=4.6e-32 Score=245.96 Aligned_cols=146 Identities=43% Similarity=0.688 Sum_probs=140.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC----ccccchhhcccCHHHHHHHhhcceEEEEeC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG----KVLSGDQIDQMTEHQLQQVVNSVTVFYRVT 311 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~ 311 (608)
||+|++++++|+.|+++||+++|+|||+..||+.+|+++||...+. ..++|.+++..+..+..+...+..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 9999999999999999999999999999999999999999977654 357889999999999999999999999999
Q ss_pred chhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHH
Q psy16789 312 PRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382 (608)
Q Consensus 312 p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~g 382 (608)
|+||..+|+.+|+.|++|+|+|||.||++||++|||||+++ ++++.++++||+++.+++|..+.++|+||
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999998
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=9.1e-29 Score=263.54 Aligned_cols=214 Identities=27% Similarity=0.451 Sum_probs=193.0
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCC
Q psy16789 381 EGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPM 460 (608)
Q Consensus 381 ~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l 460 (608)
.||.++.|++|++.|.++.|+..+...+++.+++.+.|++|.|+||+|+++|++|++++++|||++++|++|||++++++
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~l 306 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPL 306 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCS
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhhcccc-------------------------------cccccccchhhHHHHHHHH
Q psy16789 461 ITRALVVNVLMSASIIIVGTLYVFKREMSD-------------------------------NIVSKRDTTMTFTCFVFFD 509 (608)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~t~~f~~lv~~~ 509 (608)
++++++.+++.++++.....+..+++.... .....+++|++|.+++++|
T Consensus 307 i~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q 386 (472)
T d1wpga4 307 ISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIE 386 (472)
T ss_dssp SCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHH
Confidence 999999999988887665554443322100 0011235799999999999
Q ss_pred HHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 510 MFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIE 589 (608)
Q Consensus 510 l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~ 589 (608)
+++.+++|+.+.++|+.++++|++++++++++++++++++|+|+++..|++.|+++.+|+++++++++.++++|++|++.
T Consensus 387 ~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~ 466 (472)
T d1wpga4 387 MCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIA 466 (472)
T ss_dssp HHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhh
Q psy16789 590 RICER 594 (608)
Q Consensus 590 r~~~~ 594 (608)
|++++
T Consensus 467 R~~~~ 471 (472)
T d1wpga4 467 RNYLE 471 (472)
T ss_dssp HTTTC
T ss_pred hcCCC
Confidence 88764
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=3.7e-27 Score=204.71 Aligned_cols=123 Identities=38% Similarity=0.602 Sum_probs=108.0
Q ss_pred EEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE
Q psy16789 229 MGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 229 ~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
.+.++++|++|++++++|+.|+++||+++|+|||+..++..+|+++||.. +++
T Consensus 13 ~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------v~~ 65 (135)
T d2b8ea1 13 TLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIA 65 (135)
T ss_dssp CCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EEC
T ss_pred EEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh---------------------------hcc
Confidence 44688999999999999999999999999999999999999999999964 889
Q ss_pred EeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 309 RVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 309 r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
+++|++|.++++.+|+. ..|+|+|||.||+|||++||+||+++ ++++.++++||+++.++++.+++++|+
T Consensus 66 ~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 66 EVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp SCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 99999999999999875 68999999999999999999999999 899999999999999999999998873
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.90 E-value=3.6e-24 Score=203.12 Aligned_cols=155 Identities=19% Similarity=0.286 Sum_probs=120.0
Q ss_pred CCCchHHHHHHHHhhhhhceeeeCC---------ccccCchHHHHHHHHHhcCc--hhhhhhccccccccccccccccee
Q psy16789 29 IRSKPETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGL--YAVNEHYVRLKEYPFSSEQKMMAV 97 (608)
Q Consensus 29 ~~~~~~~~~ll~~~~l~n~a~~~~~---------~~~G~pte~All~~~~~~g~--~~~~~~~~~v~~~pF~s~~k~m~v 97 (608)
...++.+..+++++++||++.+..+ ...|||||+||+.++.+.|. ..++++++++.++||+|++|+|++
T Consensus 28 ~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~ 107 (214)
T d1q3ia_ 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLS 107 (214)
T ss_dssp CCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEE
T ss_pred ccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEE
Confidence 3566788889999999999987532 36899999999999998776 578899999999999999999999
Q ss_pred eecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHH
Q psy16789 98 RCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMM 176 (608)
Q Consensus 98 ~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m 176 (608)
++..+++ +..+++++||++| ++..|+... ....+.|.+.+.|.-
T Consensus 108 v~~~~~~----~~~~~~~~KGApe~Il~~C~~~~-------------------------------~~g~~~~l~~~~~~~ 152 (214)
T d1q3ia_ 108 IHEREDN----PQSHVLVMKGAPERILDRCSSIL-------------------------------VQGKEIPLDKEMQDA 152 (214)
T ss_dssp EEECSSC----TTSEEEEEEECHHHHHHTEEEEE-------------------------------ETTEEEECCHHHHHH
T ss_pred EEEccCC----CCceeEEecCCHHHHHHhhhhee-------------------------------eCCceeechHHHHHH
Confidence 9987543 2457889999999 999997621 223567777765553
Q ss_pred HhHhhhcCCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEcc-------------------CCCCceEEEEeeecCC
Q psy16789 177 AVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGS-------------------NLQDLCYMGLVGICDP 237 (608)
Q Consensus 177 ~v~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~-------------------~e~~l~~~G~~~~~d~ 237 (608)
. .+.+++|+++|+|||++||++ .|+||+|+|+++++||
T Consensus 153 i-----------------------~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DP 209 (214)
T d1q3ia_ 153 F-----------------------QNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDH 209 (214)
T ss_dssp H-----------------------HHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESC
T ss_pred H-----------------------HHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeC
Confidence 3 237899999999999999983 2579999999999999
Q ss_pred CChh
Q psy16789 238 PRPH 241 (608)
Q Consensus 238 ~r~~ 241 (608)
||+.
T Consensus 210 PR~~ 213 (214)
T d1q3ia_ 210 HHHH 213 (214)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 9964
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.87 E-value=6.7e-23 Score=197.79 Aligned_cols=178 Identities=21% Similarity=0.249 Sum_probs=136.0
Q ss_pred cccceeeeecCccce--ecccccCcCCCC----------CCCchHHHHHHHHhhhhhceeeeCC------ccccCchHHH
Q psy16789 2 KLFDLIRLEFRPSFL--EKVHGDGRNSSR----------IRSKPETGTLLEVGCVCNNASIIGD------SLLGQPTEGA 63 (608)
Q Consensus 2 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~----------~~~~~~~~~ll~~~~l~n~a~~~~~------~~~G~pte~A 63 (608)
|||..+.+.-+++-+ .+|+|.+|.+.+ ....+.+.+++.++++||++.+... ...|||||+|
T Consensus 5 ~m~v~~~~~~~~~~~~~~~VtG~~y~p~G~i~~~~~~v~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~A 84 (239)
T d1wpga3 5 KMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETA 84 (239)
T ss_dssp EEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHH
T ss_pred EEEEEeeecCCcccceEEEEEeEeeCCceEEEECCcCcCccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHH
Confidence 678888776665444 468999998876 2234678889999999999987532 3679999999
Q ss_pred HHHHHHhcCch------------------hhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhh-hhc
Q psy16789 64 LLAAGMKFGLY------------------AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGC 124 (608)
Q Consensus 64 ll~~~~~~g~~------------------~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~ 124 (608)
|+.++.+.|.. ..+++++++.++||+|+||+|+|++..+++... +..+++++||++| ++.
T Consensus 85 Ll~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~-~~~~~l~vKGApe~iL~ 163 (239)
T d1wpga3 85 LTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA-AVGNKMFVKGAPEGVID 163 (239)
T ss_dssp HHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGG-GGCSEEEEEECHHHHHH
T ss_pred HHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcc-cceeEEEEeCChHHHHH
Confidence 99999998852 135789999999999999999999987654321 2346789999999 999
Q ss_pred cccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhhhhhh
Q psy16789 125 VCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEY 204 (608)
Q Consensus 125 lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~~~~~ 204 (608)
+|.... ......|++.+.|..... .+
T Consensus 164 ~C~~~~-------------------------------~~~~~~~l~~~~~~~~~~-----------------------~~ 189 (239)
T d1wpga3 164 RCNYVR-------------------------------VGTTRVPMTGPVKEKILS-----------------------VI 189 (239)
T ss_dssp TEEEEE-------------------------------ETTEEEECCHHHHHHHHH-----------------------HH
T ss_pred hcccee-------------------------------cCCceeeCCHHHHHHHHH-----------------------HH
Confidence 997621 123456888776665443 44
Q ss_pred HH--HhhccCceEEEEEcc------------------CCCCceEEEEeee
Q psy16789 205 PK--FQTLGKGLVAMARGS------------------NLQDLCYMGLVGI 234 (608)
Q Consensus 205 ~~--~~~~g~r~l~~a~~~------------------~e~~l~~~G~~~~ 234 (608)
++ ++++|+|||++|||+ +|+||+|+|++|+
T Consensus 190 ~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 190 KEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred HHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 44 478999999999984 2679999999986
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.86 E-value=2.2e-25 Score=230.52 Aligned_cols=292 Identities=10% Similarity=-0.025 Sum_probs=203.4
Q ss_pred cccccccccccceeeecCCCCCccccceEEEEc-----------cchh---h---hhccccceeeeccccCCCccHHHHH
Q psy16789 84 KEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL-----------HRLL---E---VGCVCNNASIIGDSLLGQPTEGALL 146 (608)
Q Consensus 84 ~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~-----------kg~~---e---i~~lc~~a~~~~~~~~gdp~E~Al~ 146 (608)
+.++..+..++.+++|.+++++.+++.+....+ .|.. + +..+|+.+... ...++|++.+++
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~--~~~~~~~~~~~~ 105 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDIL--KKLSHDEIEAFM 105 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH--TTSCHHHHHHHH
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHH--hhcCCCcHHHHH
Confidence 456777888889999999988876554322111 1111 1 22334433221 346888999888
Q ss_pred HHHHHcCcc--ccccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHH------HhhhhhhhHHHhhccCceEE
Q psy16789 147 AAGMKFGLY--AVNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMI------LSQSCSEYPKFQTLGKGLVA 216 (608)
Q Consensus 147 ~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~------~~~~~~~~~~~~~~g~r~l~ 216 (608)
......+.. ..++.|....++||++.+|+|++...... .....+++.+.+ .+++...+..++.+|+|+++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 106 YQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp HCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTCSCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred HHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCCcHHHHHHHHhHHHHHHHHHHHHHH
Confidence 776543332 24567788889999999999988632111 111223333322 22345567889999999999
Q ss_pred EEEc-------cCCCCceEEEEeeecCCC--ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC--Ccccc
Q psy16789 217 MARG-------SNLQDLCYMGLVGICDPP--RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH--GKVLS 285 (608)
Q Consensus 217 ~a~~-------~~e~~l~~~G~~~~~d~~--r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~--~~vi~ 285 (608)
+|++ ....+....|++..++++ +++++++++.|+++|++++|+|||+..+|..+++++|+.... ..+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~ 265 (380)
T d1qyia_ 186 LGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIAT 265 (380)
T ss_dssp HHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEEC
T ss_pred HhhhcccccccccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEe
Confidence 9986 223455667999999984 569999999999999999999999999999999999997643 23455
Q ss_pred chhhcccCHHH---------HHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCC---eeEEeCC
Q psy16789 286 GDQIDQMTEHQ---------LQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKAD---IGIAMGK 353 (608)
Q Consensus 286 g~~~~~~~~~~---------~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~---vgia~~~ 353 (608)
+++........ -...+.....+.|.+|.+|..+++.++..++.|+|+|||.||++|.|+|| |||+||.
T Consensus 266 ~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~ 345 (380)
T d1qyia_ 266 ASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345 (380)
T ss_dssp HHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBT
T ss_pred cchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCC
Confidence 54432110000 00122233456889999999999999999999999999999999999999 9999996
Q ss_pred CCcHHHHh----ccCEEEecCCcchHHHHH
Q psy16789 354 QGTDVCKE----AADMILVDDDFNTIIAAI 379 (608)
Q Consensus 354 ~~~~~a~~----~ad~v~~~~~~~~i~~~i 379 (608)
.+++..++ .||+++. ++..+.+++
T Consensus 346 ~g~~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 346 KGKDAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp TBGGGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred CCcccHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 66655443 7999994 666665544
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.37 E-value=1.5e-12 Score=123.26 Aligned_cols=146 Identities=19% Similarity=0.179 Sum_probs=106.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-----Cccccchh-----------------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-----GKVLSGDQ----------------------- 288 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-----~~vi~g~~----------------------- 288 (608)
.+.+++.++|++++++|++++++|||+...+..++...++..+. ..+.....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 47789999999999999999999999999999999998885421 00000000
Q ss_pred -----------------hcccCHHHHHHHhhcc----e-------EEEEeCchhHHHHHHHHHHC----CCEEEEEcCCc
Q psy16789 289 -----------------IDQMTEHQLQQVVNSV----T-------VFYRVTPRHKLTIVKAFQAN----GVIVGMTGDGV 336 (608)
Q Consensus 289 -----------------~~~~~~~~~~~~~~~~----~-------v~~r~~p~~K~~~v~~l~~~----g~~v~~~GDg~ 336 (608)
-.....+.+.+...+. . +-.......|...++.+.+. ...++++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 0001122233332221 1 22223345788888776543 35699999999
Q ss_pred CcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHH
Q psy16789 337 NDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGK 383 (608)
Q Consensus 337 ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR 383 (608)
||.+|++.||+||+|+ ++.+.+|+.||+++.+++.++++++|++..
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999987643
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.31 E-value=6.3e-12 Score=118.93 Aligned_cols=146 Identities=16% Similarity=0.157 Sum_probs=104.6
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC----Ccc-ccchh---------------------
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH----GKV-LSGDQ--------------------- 288 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~----~~v-i~g~~--------------------- 288 (608)
+..+.+++.+++++|++.|++++++|||+...+..+++..|+..+. +.+ ...+.
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 3457799999999999999999999999999999999999985431 000 00000
Q ss_pred -------------------hcccCHHHHHHHhhc--ceE-----EEEeC--chhHHHHHHHHHH-CC---CEEEEEcCCc
Q psy16789 289 -------------------IDQMTEHQLQQVVNS--VTV-----FYRVT--PRHKLTIVKAFQA-NG---VIVGMTGDGV 336 (608)
Q Consensus 289 -------------------~~~~~~~~~~~~~~~--~~v-----~~r~~--p~~K~~~v~~l~~-~g---~~v~~~GDg~ 336 (608)
......+.+.+.... ..+ ..... ...|...++.+.+ .| ..|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 000011122222111 111 12222 3478888876654 33 4589999999
Q ss_pred CcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 337 NDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 337 ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
||.+|++.||+||+|+ |+.+.+++.||+++..++..++.+++++
T Consensus 178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999 9999999999999999999999998864
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.31 E-value=5.1e-12 Score=123.92 Aligned_cols=71 Identities=24% Similarity=0.358 Sum_probs=62.1
Q ss_pred eCch--hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 310 VTPR--HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 310 ~~p~--~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.+|. .|...++.+.+. | ..|+++|||.||.+||+.|+.|+||+ |+.+.+++.||+++.+++.+|+.++|++
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 4454 799888888654 3 46999999999999999999999999 9999999999999999999999998864
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=1.7e-11 Score=119.27 Aligned_cols=144 Identities=22% Similarity=0.274 Sum_probs=105.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCcccc--chhh---------cc--c----------
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLS--GDQI---------DQ--M---------- 292 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~--g~~~---------~~--~---------- 292 (608)
..+.+++.+++++|+++|++++++|||+...+..+.+++++..+...++. |..+ .. .
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 34779999999999999999999999999999999999998654221110 0000 00 0
Q ss_pred ------------------------------------------------------------CHHHHHHHhh--------cc
Q psy16789 293 ------------------------------------------------------------TEHQLQQVVN--------SV 304 (608)
Q Consensus 293 ------------------------------------------------------------~~~~~~~~~~--------~~ 304 (608)
.++.+.+... ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 0111111111 11
Q ss_pred eE------EEEeCch--hHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCc
Q psy16789 305 TV------FYRVTPR--HKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDF 372 (608)
Q Consensus 305 ~v------~~r~~p~--~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~ 372 (608)
.+ +....|. +|...++.+.+. ...++++|||.||.+|++.|++|++|+ |+.+.+|+.|++++..++-
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTT
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCc
Confidence 11 1234444 699888887664 345899999999999999999999999 9999999999999998888
Q ss_pred chHHHHHH
Q psy16789 373 NTIIAAIE 380 (608)
Q Consensus 373 ~~i~~~i~ 380 (608)
+|+.++++
T Consensus 259 ~Gv~~~l~ 266 (271)
T d1rkqa_ 259 DGVAFAIE 266 (271)
T ss_dssp THHHHHHH
T ss_pred ChHHHHHH
Confidence 99999886
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.21 E-value=1e-11 Score=120.64 Aligned_cols=71 Identities=24% Similarity=0.256 Sum_probs=62.2
Q ss_pred EeCch--hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 309 RVTPR--HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 309 r~~p~--~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.++|. .|...++.+.+. | ..|+++|||.||.+|++.|+.|++|+ |+.+.+|+.|++++.+++.+|+++.|+
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45554 599888887654 3 45999999999999999999999999 999999999999999999999999886
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.16 E-value=1.5e-11 Score=119.02 Aligned_cols=67 Identities=31% Similarity=0.303 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. ...++++|||.||.+||+.||.|++|+ |+.+.+|+.||++..+++-++++++|++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 688888877653 356999999999999999999999999 9999999999999999999999999964
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.12 E-value=1.4e-12 Score=122.33 Aligned_cols=118 Identities=19% Similarity=0.149 Sum_probs=87.7
Q ss_pred hhhccccceeeecc---------ccCCCccHHHHHHHHHHcCccc--cccccccceeeeCChHHHHHHhHhhhc----CC
Q psy16789 121 EVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGLYA--VNEHYVRLKEYPFSSEQKMMAVRVHKI----GH 185 (608)
Q Consensus 121 ei~~lc~~a~~~~~---------~~~gdp~E~Al~~~~~~~~~~~--~~~~~~~~~~~pF~s~~k~m~v~~~~~----~~ 185 (608)
++.++||++.+..+ .+.|||||.||++++.+.+... .+.+|+++.++||+|++|+|+++++.. .+
T Consensus 39 ~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~ 118 (214)
T d1q3ia_ 39 RIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSH 118 (214)
T ss_dssp HHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSE
T ss_pred HHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCce
Confidence 37789999876432 4689999999999999876643 567899999999999999999998643 23
Q ss_pred cCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEc
Q psy16789 186 NLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVT 260 (608)
Q Consensus 186 ~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~T 260 (608)
.++.|||++.+++.|...+. .| +.+.+.+..|+.+.+.++++.+.|.||+.+.
T Consensus 119 ~~~~KGApe~Il~~C~~~~~----~g------------------~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 119 VLVMKGAPERILDRCSSILV----QG------------------KEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEECHHHHHHTEEEEEE----TT------------------EEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEecCCHHHHHHhhhheee----CC------------------ceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 45899999999999976542 22 2345667778899999999999999998774
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.12 E-value=7.9e-11 Score=114.26 Aligned_cols=71 Identities=20% Similarity=0.341 Sum_probs=61.3
Q ss_pred EeCch--hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 309 RVTPR--HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 309 r~~p~--~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
.++|. .|...++.+.+. | ..|+++|||.||.+||+.||+|++|+ |+.+.+|+.||+++.+++.++++++|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 34554 688888877553 3 35899999999999999999999999 999999999999999999999998885
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.07 E-value=2.4e-10 Score=102.81 Aligned_cols=107 Identities=14% Similarity=0.132 Sum_probs=86.6
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
.+|+.+++.|+.+.++||+....+...++++++... .....+|...++.+.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~-----------------------------~~~~~~K~~~l~~~~ 89 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF-----------------------------FLGKLEKETACFDLM 89 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE-----------------------------EESCSCHHHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccccc-----------------------------ccccccHHHHHHHHH
Confidence 479999999999999999999999999999998642 122345655555443
Q ss_pred H-C---CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch-HHHHHH
Q psy16789 324 A-N---GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT-IIAAIE 380 (608)
Q Consensus 324 ~-~---g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~-i~~~i~ 380 (608)
+ . ...|+++||+.||.+||+.|++|+|++ ++.+.+|+.||+|+..+.-.+ +.++++
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e 150 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSD 150 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHH
T ss_pred HHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHH
Confidence 3 3 467999999999999999999999999 999999999999998876555 444443
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.06 E-value=2.5e-10 Score=111.27 Aligned_cols=66 Identities=21% Similarity=0.194 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC-cchHHHHHH
Q psy16789 314 HKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD-FNTIIAAIE 380 (608)
Q Consensus 314 ~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~-~~~i~~~i~ 380 (608)
.|...++.+.+. ...|+++|||.||.+|++.||+|++|+ |+.+.+|+.||+++..++ ..++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 677666666543 356999999999999999999999999 999999999999997554 445777664
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.01 E-value=4.1e-12 Score=121.27 Aligned_cols=117 Identities=15% Similarity=0.187 Sum_probs=88.9
Q ss_pred hhccccceeeecc------ccCCCccHHHHHHHHHHcCcccc------------------ccccccceeeeCChHHHHHH
Q psy16789 122 VGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLYAV------------------NEHYVRLKEYPFSSEQKMMA 177 (608)
Q Consensus 122 i~~lc~~a~~~~~------~~~gdp~E~Al~~~~~~~~~~~~------------------~~~~~~~~~~pF~s~~k~m~ 177 (608)
++++||++.+..+ ...|||||.||+.++.+.|+... ++.|+++.++||||+||||+
T Consensus 56 ~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Ms 135 (239)
T d1wpga3 56 ICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMS 135 (239)
T ss_dssp HHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEE
T ss_pred HHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEE
Confidence 6789999987532 36799999999999999886432 35788999999999999999
Q ss_pred hHhhhcC-------CcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHH-
Q psy16789 178 VRVHKIG-------HNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTL- 249 (608)
Q Consensus 178 v~~~~~~-------~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l- 249 (608)
++++..+ ..++.|||++.+++.|...... | +...+.+..|+...+.++.+
T Consensus 136 vv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~----~------------------~~~~l~~~~~~~~~~~~~~~~ 193 (239)
T d1wpga3 136 VYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG----T------------------TRVPMTGPVKEKILSVIKEWG 193 (239)
T ss_dssp EEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEET----T------------------EEEECCHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCcccceeEEEEeCChHHHHHhccceecC----C------------------ceeeCCHHHHHHHHHHHHHHh
Confidence 9986432 3468999999999988754321 1 23345566667777777776
Q ss_pred -HhCCCeEEEEc
Q psy16789 250 -LQSGVKVKLVT 260 (608)
Q Consensus 250 -~~~Gi~v~~~T 260 (608)
.+.|.||+.+.
T Consensus 194 ~a~~glRvLa~A 205 (239)
T d1wpga3 194 TGRDTLRCLALA 205 (239)
T ss_dssp TSSCCCEEEEEE
T ss_pred HhhCCCEEEEEE
Confidence 45799998775
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=3.7e-10 Score=105.89 Aligned_cols=122 Identities=22% Similarity=0.257 Sum_probs=89.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE----EeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY----RVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~----r~~p 312 (608)
+++|++.+.++.|+++|++++++||.....+..+++.+|++..+ ++ +.++...... ...-+- ...+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~-an~~~~~~~G-------~~~g~~~~~p~~~~ 151 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VF-ANRLKFYFNG-------EYAGFDETQPTAES 151 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EE-EECEEECTTS-------CEEEECTTSGGGST
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--ee-eeeeeeeehh-------ccccceeeeeeecc
Confidence 36799999999999999999999999999999999999997531 11 1111000000 000000 0235
Q ss_pred hhHHHHHHHHHHC--CCEEEEEcCCcCcHHHHHhCCeeEEeCCC-CcHHHHhccCEEEe
Q psy16789 313 RHKLTIVKAFQAN--GVIVGMTGDGVNDGVALKKADIGIAMGKQ-GTDVCKEAADMILV 368 (608)
Q Consensus 313 ~~K~~~v~~l~~~--g~~v~~~GDg~ND~~al~~A~vgia~~~~-~~~~a~~~ad~v~~ 368 (608)
..|.++++.+++. ...+.++|||.||++|++.||++||++.+ .....++.||+++.
T Consensus 152 ~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~ 210 (217)
T d1nnla_ 152 GGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT 210 (217)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES
T ss_pred chHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC
Confidence 6799999988764 35689999999999999999999999744 45677788999885
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.89 E-value=1.3e-09 Score=102.49 Aligned_cols=143 Identities=16% Similarity=0.112 Sum_probs=101.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC---CccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH---GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~---~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
++++++.+.++.|++.|+++.++|+.....+..+.+++|+.... ....+++...... ........+...|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~------~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW------PHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEEC------TTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceecc------ccccccccccCCHH
Confidence 46799999999999999999999999999999999999875421 0011111110000 00001123345688
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHH-hccCEEEecCCcchHHHHHHHHHHHHH
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCK-EAADMILVDDDFNTIIAAIEEGKGIFY 387 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~-~~ad~v~~~~~~~~i~~~i~~gR~~~~ 387 (608)
.|..+++.++..+..|+++||+.||.+|++.||++++++ ...+.++ +..+++. -++|+.+...+++-....+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHH
Confidence 899999999988999999999999999999999999998 4444444 3444433 4588888888766554443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.87 E-value=5.5e-09 Score=96.06 Aligned_cols=129 Identities=21% Similarity=0.207 Sum_probs=92.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
..++....++.+ +.+.+...+|+.............++.......+...... .........+..+..
T Consensus 70 ~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~~~~~~~~~~~~ 136 (206)
T d1rkua_ 70 PLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD------------RVVGYQLRQKDPKRQ 136 (206)
T ss_dssp CCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS------------CEEEEECCSSSHHHH
T ss_pred ccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc------------ccccccccchhhHHH
Confidence 455666666555 5789999999999999999999988865432211111100 011222334455667
Q ss_pred HHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 318 IVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 318 ~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.++.++.....|+++|||.||++|++.||+||||+ +..+..++++|++.. .+++.+.+.|.+
T Consensus 137 ~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 137 SVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 77888888999999999999999999999999995 667777788898775 477778877654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.87 E-value=1.3e-09 Score=103.79 Aligned_cols=140 Identities=16% Similarity=0.094 Sum_probs=95.2
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc-------cccchhhcc---------c------------
Q psy16789 241 HVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK-------VLSGDQIDQ---------M------------ 292 (608)
Q Consensus 241 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~-------vi~g~~~~~---------~------------ 292 (608)
+..+++.++++.|++++++|||+...+..+.++.++..+... +...+.... .
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 334456667888999999999999999999999998654211 111100000 0
Q ss_pred ------------------------C---HHHHHHHhhcc----e--------EEEEeCchhHHHHHHHHHHC-C---CEE
Q psy16789 293 ------------------------T---EHQLQQVVNSV----T--------VFYRVTPRHKLTIVKAFQAN-G---VIV 329 (608)
Q Consensus 293 ------------------------~---~~~~~~~~~~~----~--------v~~r~~p~~K~~~v~~l~~~-g---~~v 329 (608)
. .+++....... . +-.......|...++.+.+. | ..|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0 01111111111 0 11122344799888887765 3 458
Q ss_pred EEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC-------EEEecCCcchHHHHHHH
Q psy16789 330 GMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD-------MILVDDDFNTIIAAIEE 381 (608)
Q Consensus 330 ~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad-------~v~~~~~~~~i~~~i~~ 381 (608)
.++|||.||.+|++.||.|++|+ |+.+.+++.|| ++...++..++.++|++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 99999999999999999999999 99999999888 66666777888888754
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.87 E-value=1.3e-09 Score=100.62 Aligned_cols=130 Identities=25% Similarity=0.240 Sum_probs=93.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE--eCch
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR--VTPR 313 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r--~~p~ 313 (608)
.++.+++.+.++.++..|..+.++||.....+....++.+........+..+..... ..... ..+.
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 141 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLT------------GDVEGEVLKEN 141 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE------------EEEECSSCSTT
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccc------------ccccccccccc
Confidence 467789999999999999999999999999999999988876532222211111100 00000 1122
Q ss_pred hHHHHHHHH----HHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 314 HKLTIVKAF----QANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 314 ~K~~~v~~l----~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.|...+..+ +-....++++|||.||++|++.||+|||| ++.+..++.||+++.++++++|++.|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 142 AKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 333333333 23345699999999999999999999999 68899999999999988999887654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.83 E-value=5.8e-09 Score=98.74 Aligned_cols=44 Identities=7% Similarity=0.075 Sum_probs=39.8
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
.+...+.+.++|++++++|++++++|||+...+..+.+++++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 45556889999999999999999999999999999999999854
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=3.3e-08 Score=92.53 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=38.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
.+.+.+.+++++++++|++++++|||+...+..+.+++++..
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 467889999999999999999999999999999999999853
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.23 E-value=9.4e-07 Score=81.97 Aligned_cols=65 Identities=14% Similarity=0.255 Sum_probs=46.0
Q ss_pred EeCch--hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 309 RVTPR--HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 309 r~~p~--~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
...|. .|...++.+.+. ..++++||+.||.+|++.++.|++|. +|.. +.+|++.+.+ ...+.+.+
T Consensus 152 di~p~g~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp EEECTTCCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEESS--HHHHHHHH
T ss_pred EEecCCCCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcCC--HHHHHHHH
Confidence 44443 799999999876 45778999999999999997776665 3322 3578888863 33344444
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=1.4e-06 Score=80.46 Aligned_cols=117 Identities=19% Similarity=0.195 Sum_probs=85.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.++++.|+++|+++.++|+.+...+..+.+..|+......++++++..... ..|+-=.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~K----------------p~~~~~~ 151 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSK----------------PHPQVYL 151 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCT----------------TSTHHHH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccch----------------hhHHHHH
Confidence 346999999999999999999999999999999999999987777777776653321 1122233
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE-e--CCCCcHHHHhccCEEEec
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA-M--GKQGTDVCKEAADMILVD 369 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia-~--~~~~~~~a~~~ad~v~~~ 369 (608)
.+++.+.-....++++||+.+|+.+-+.||+... + +....+.....||+++.+
T Consensus 152 ~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~ 207 (218)
T d1te2a_ 152 DCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 207 (218)
T ss_dssp HHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC
Confidence 4555555456789999999999999999996432 2 212223333567888764
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.21 E-value=2e-06 Score=80.00 Aligned_cols=125 Identities=18% Similarity=0.211 Sum_probs=87.8
Q ss_pred CChhHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 238 PRPHVRECMSTLLQSG-VKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
+.+++.++++.|++.| +++.++|+.+...+..+.+..|+....+.++.+++.....+. |..-.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~----------------p~~~~ 155 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNEL----------------PHIAL 155 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGH----------------HHHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccch----------------hHHHH
Confidence 4589999999999987 899999999999999999999998877666666554322111 11111
Q ss_pred HHHHHHHH---CCCEEEEEcCCcCcHHHHHhCC---eeEEeCCCCcHH-HHhccCEEEecCCcchHHHHHH
Q psy16789 317 TIVKAFQA---NGVIVGMTGDGVNDGVALKKAD---IGIAMGKQGTDV-CKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 317 ~~v~~l~~---~g~~v~~~GDg~ND~~al~~A~---vgia~~~~~~~~-a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
..++.+.. ....++|+||+.+|+.|-+.|| ++|+.|....+. .+..||+++. ++..+.+.|.
T Consensus 156 ~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 156 ERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred HHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 22333322 2357999999999999999999 455555333332 3446899884 7777777764
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.17 E-value=5.8e-07 Score=84.03 Aligned_cols=53 Identities=13% Similarity=0.216 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHC-CCEEEEEcC----CcCcHHHHHhCC-eeEEeCCCCcHHHHhccCEEE
Q psy16789 314 HKLTIVKAFQAN-GVIVGMTGD----GVNDGVALKKAD-IGIAMGKQGTDVCKEAADMIL 367 (608)
Q Consensus 314 ~K~~~v~~l~~~-g~~v~~~GD----g~ND~~al~~A~-vgia~~~~~~~~a~~~ad~v~ 367 (608)
.|...++.+.+. ...|+++|| |.||.+|++.|+ .|+||+ |+.+.+|..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 788888888664 568999999 469999999997 799999 99999999998765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.11 E-value=1.1e-06 Score=81.31 Aligned_cols=124 Identities=21% Similarity=0.343 Sum_probs=89.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++++.++.|++.|+++.++||.....+..+.+.+|+......++.+.+.....+ .|+--.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp----------------~p~~~~ 158 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKP----------------HPAPFY 158 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTT----------------SSHHHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccc----------------cchhhH
Confidence 4579999999999999999999999999999999999999876666665555432211 133333
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEe--CCC-CcHHHHhccCEEEecCCcchHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAM--GKQ-GTDVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~--~~~-~~~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.+.+.++-....++|+||+.+|..+-+.||+ .|.+ +.+ ..+.....+|+++. ++..+.++
T Consensus 159 ~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~i 222 (224)
T d2hsza1 159 YLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKI 222 (224)
T ss_dssp HHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGG
T ss_pred HHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHh
Confidence 4445555556789999999999999999996 3333 322 22344556888875 56655544
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.98 E-value=1.1e-05 Score=76.39 Aligned_cols=95 Identities=19% Similarity=0.193 Sum_probs=73.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.++++.|+++|+++.++||.+......+.+..|+.... +.++++++..... ..|+.-
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~K----------------P~p~~~ 162 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGR----------------PYPWMC 162 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCT----------------TSSHHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccc----------------cChHHH
Confidence 56799999999999999999999999999999999999987643 5566666553322 124444
Q ss_pred HHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCe
Q psy16789 316 LTIVKAFQAN-GVIVGMTGDGVNDGVALKKADI 347 (608)
Q Consensus 316 ~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~v 347 (608)
..+.+.+.-. .+.++|+||+.+|+.+-+.||+
T Consensus 163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence 4555555533 4679999999999999999995
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.77 E-value=4e-05 Score=70.96 Aligned_cols=126 Identities=19% Similarity=0.256 Sum_probs=88.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.++++.|+ +|+++.++|+........+.+.+|+....+.++.+++.....+ .|+-=.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP----------------~~~~~~ 162 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKP----------------HPRIFE 162 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTT----------------SHHHHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccccccccccch----------------hhHHHH
Confidence 46789999999996 5899999999999999999999999877666666555432211 121112
Q ss_pred HHHHHHHHCCCEEEEEcCC-cCcHHHHHhCCeeEE-eC-CCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDG-VNDGVALKKADIGIA-MG-KQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg-~ND~~al~~A~vgia-~~-~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.+++.+.-....++++||+ .+|+.+-+.||+... +. ..........+|+++. ++..+.++|++
T Consensus 163 ~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 228 (230)
T d1x42a1 163 LALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVDE 228 (230)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHHHHH
T ss_pred HHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC--CHHHHHHHHHH
Confidence 3334444345679999998 589999999996433 22 1233445567899875 67888887753
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.63 E-value=1.8e-05 Score=72.09 Aligned_cols=120 Identities=14% Similarity=0.110 Sum_probs=81.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.++..+ ++.++|+.+...+..+.+..|+....+.++.+++.... .|+...
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~------------------~p~~~~ 144 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPH------------------KADVIH 144 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCS------------------HHHHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccccccccccccc------------------cccccc
Confidence 45789999999999876 88899999999999999999998776665555443211 122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEe--CCCCcHH-HHhccCEEEecCCcchHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAM--GKQGTDV-CKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~--~~~~~~~-a~~~ad~v~~~~~~~~i~~ 377 (608)
.+.+.++-....++|+||+.+|+.|-+.||+ .|++ |....+. ....+|+++. ++..+.+
T Consensus 145 ~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~ 207 (210)
T d2ah5a1 145 QALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred hhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 2333333334579999999999999999996 3444 3223333 3345889875 4555544
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.53 E-value=1.1e-05 Score=73.70 Aligned_cols=118 Identities=14% Similarity=0.140 Sum_probs=81.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.+++.+.++.|++ ++++.++|+.....+..+.+..|+......++++++..... ..|+--..
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~K----------------P~p~~~~~ 145 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRK----------------PDPLPLLT 145 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCT----------------TSSHHHHH
T ss_pred cccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccch----------------hhhhhhcc
Confidence 55899999999974 79999999999999999999999987655555555443211 11333334
Q ss_pred HHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe---CCCCcHHHHhccCEEEecCCcchH
Q psy16789 318 IVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM---GKQGTDVCKEAADMILVDDDFNTI 375 (608)
Q Consensus 318 ~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~---~~~~~~~a~~~ad~v~~~~~~~~i 375 (608)
+++.++-....++|+||+.+|+.+-++||+.... | ..+....+.+|+++. ++..+
T Consensus 146 ~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dl 203 (207)
T d2hdoa1 146 ALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDI 203 (207)
T ss_dssp HHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGG
T ss_pred cccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHH
Confidence 4444433346799999999999999999976543 3 233333456788763 44444
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.49 E-value=2.7e-05 Score=70.61 Aligned_cols=96 Identities=19% Similarity=0.190 Sum_probs=69.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.++++.|++.|+++.++|+... .+..+.+..|+......++..++..... ..|+--.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~K----------------p~~~~~~ 144 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRK----------------PSPEAAT 144 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCT----------------TSSHHHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccc----------------hhHHHHH
Confidence 3569999999999999999999998765 4566788899987655555544432211 1233333
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
.+.+.+.-....++|+||+.+|..+-+.||+..
T Consensus 145 ~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~ 177 (204)
T d2go7a1 145 YLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQS 177 (204)
T ss_dssp HHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred HHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeE
Confidence 444455444568999999999999999999754
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.43 E-value=0.00012 Score=65.40 Aligned_cols=108 Identities=14% Similarity=0.069 Sum_probs=75.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++++.++.+++.|+++.++|+.+.... .+.+..|+....+.++.+++.....+ .|+--.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP----------------~p~~~~ 141 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKP----------------NPESML 141 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTT----------------SCHHHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccccCC----------------CHHHHH
Confidence 4569999999999999999999999876554 56788998876666666655432211 122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad 364 (608)
.+.+.+. ...+.++||+.+|+.+-++||+-...- ++....++..|
T Consensus 142 ~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d 186 (187)
T d2fi1a1 142 YLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 186 (187)
T ss_dssp HHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcC
Confidence 3333332 234889999999999999999875544 56666666554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.42 E-value=0.0003 Score=67.05 Aligned_cols=132 Identities=15% Similarity=0.185 Sum_probs=81.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-----eC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-----VT 311 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-----~~ 311 (608)
++|+++++.++.|++.|+++.++||--......+++++|+..++-.++. ..+..... . +... ..
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~s-N~l~f~~~--------~--~~~~~~~~~i~ 203 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS-NFMDFDEN--------G--VLKGFKGELIH 203 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEE-ECEEECTT--------S--BEEEECSSCCC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEe-eEEEEeCC--------e--eEeeccCCccc
Confidence 4799999999999999999999999999999999999999765322221 11110000 0 0000 11
Q ss_pred chhHHHHH----HHHHH--CCCEEEEEcCCcCcHHHHHhC---CeeEEeCC-CCc-----HHHHhccCEEEecCCcchHH
Q psy16789 312 PRHKLTIV----KAFQA--NGVIVGMTGDGVNDGVALKKA---DIGIAMGK-QGT-----DVCKEAADMILVDDDFNTII 376 (608)
Q Consensus 312 p~~K~~~v----~~l~~--~g~~v~~~GDg~ND~~al~~A---~vgia~~~-~~~-----~~a~~~ad~v~~~~~~~~i~ 376 (608)
...|...+ ...+. ....|.++|||.||..|.+.+ +..+++|- +.. +.-.++-|+|+.++.--.++
T Consensus 204 ~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~ 283 (291)
T d2bdua1 204 VFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVV 283 (291)
T ss_dssp TTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred cccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHH
Confidence 22333222 22233 346799999999999998753 33333321 222 22235779998876655454
Q ss_pred HHH
Q psy16789 377 AAI 379 (608)
Q Consensus 377 ~~i 379 (608)
..|
T Consensus 284 ~~i 286 (291)
T d2bdua1 284 NSI 286 (291)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00038 Score=61.73 Aligned_cols=135 Identities=19% Similarity=0.133 Sum_probs=74.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHH---------------HHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhh
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQET---------------ATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVN 302 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t---------------a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 302 (608)
+-+++.++++.|+++|+++.++|..+... ........|+.... ..+.....+.... ...
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~cp~~p~~~~~-----~~~ 101 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG-IYYCPHHPQGSVE-----EFR 101 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE-EEEECCBTTCSSG-----GGB
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc-eeecccccccccc-----ccc
Confidence 45899999999999999999999876321 11111222221110 0000000000000 000
Q ss_pred cceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee--EEeC--CCCcHHHHhccCEEEecCCcchHHHH
Q psy16789 303 SVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG--IAMG--KQGTDVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 303 ~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg--ia~~--~~~~~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
....+....|.--..+.+.+.-....+.|+||+.+|..|-+.|+++ +.+. ....+.....||+++. ++..+.+.
T Consensus 102 ~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~dl~~~ 179 (182)
T d2gmwa1 102 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQA 179 (182)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHHH
T ss_pred ccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHHHHHHH
Confidence 0000111223333344555554456799999999999999999985 3333 2224555667999985 77778877
Q ss_pred HH
Q psy16789 379 IE 380 (608)
Q Consensus 379 i~ 380 (608)
|+
T Consensus 180 ik 181 (182)
T d2gmwa1 180 IK 181 (182)
T ss_dssp HH
T ss_pred hc
Confidence 75
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00029 Score=65.24 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=77.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccc-hhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSG-DQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g-~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
-.+.|++.+.+++|+++|+++.++|+..........+.+|+.......... ++... ....|+-
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----------------~KP~p~~ 189 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG----------------HKVESES 189 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC----------------CTTCHHH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccc----------------cCCCcHH
Confidence 346799999999999999999999999999999999999986543222111 11110 0111222
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe----CCCCcHHHHhccCEEEe
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM----GKQGTDVCKEAADMILV 368 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~----~~~~~~~a~~~ad~v~~ 368 (608)
=..+.+.+.-....++|+||..+|+.+-++||+...+ +..........++.++.
T Consensus 190 ~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 190 YRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 2234444444467899999999999999999975444 22223333445566664
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.24 E-value=0.0005 Score=63.84 Aligned_cols=126 Identities=13% Similarity=0.114 Sum_probs=85.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+ .|+++.++|+.+........+.+|+......++.+++.....+ .|+-=.
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP----------------~p~~~~ 171 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKP----------------APSIFY 171 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTT----------------CHHHHH
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccccccccccchh----------------hhhhHH
Confidence 36799999999998 5899999999999999999999999877666666655432111 111111
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee-EEeC-CCC--cHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG-IAMG-KQG--TDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg-ia~~-~~~--~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.+.+.+.-....++|+||+. +|+.+-+.||+. +.+- ..+ .......+|+++. ++..+.++|++
T Consensus 172 ~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 172 HCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred HHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 33333333345699999996 899999999985 4432 111 1222335788875 67777777753
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.18 E-value=8.5e-05 Score=68.68 Aligned_cols=49 Identities=14% Similarity=0.235 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHC-CCEEEEEcC----CcCcHHHHHhCC-eeEEeCCCCcHHHHhccC
Q psy16789 314 HKLTIVKAFQAN-GVIVGMTGD----GVNDGVALKKAD-IGIAMGKQGTDVCKEAAD 364 (608)
Q Consensus 314 ~K~~~v~~l~~~-g~~v~~~GD----g~ND~~al~~A~-vgia~~~~~~~~a~~~ad 364 (608)
+|...++.+... ...|+++|| |.||.+||+.|+ .|++++ + .+.+++.++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~-~~~~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-A-PEDTRRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-S-HHHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-C-HHHHHHHHH
Confidence 688777777553 578999999 779999999998 688876 4 455554443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.04 E-value=0.00058 Score=59.32 Aligned_cols=90 Identities=12% Similarity=0.062 Sum_probs=63.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch--
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDG-QETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR-- 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~-- 313 (608)
++.|++.++++.|+++|+++.++|+.+ ...+....+..++......+ .....|.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~-----------------------~~~~kp~~~ 102 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQR-----------------------EIYPGSKVT 102 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEE-----------------------EESSSCHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceee-----------------------ecccCCChH
Confidence 478999999999999999999999765 45666677777775433221 1111222
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
.-..+.+.+.-..+.++++||+.+|+.+-++||+-.
T Consensus 103 ~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 103 HFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 222344444444567999999999999999999743
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=97.02 E-value=0.00035 Score=63.57 Aligned_cols=121 Identities=13% Similarity=0.184 Sum_probs=86.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+.+++.++++.+++.|+++.++|+..........+..++....+.++...+.....+ .|+-=..
T Consensus 94 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP----------------~p~~~~~ 157 (220)
T d1zrna_ 94 PFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKP----------------DNRVYEL 157 (220)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTT----------------SHHHHHH
T ss_pred ccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeecccc----------------HHHHHHH
Confidence 468999999999999999999999999999999999999887777766665543221 1222223
Q ss_pred HHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe-C--CCCcHHHHhccCEEEecCCcchHH
Q psy16789 318 IVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM-G--KQGTDVCKEAADMILVDDDFNTII 376 (608)
Q Consensus 318 ~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~-~--~~~~~~a~~~ad~v~~~~~~~~i~ 376 (608)
+.+.+.-....++|+||+.+|+.+-+.||+-... . ....+.....+|+++. ++..+.
T Consensus 158 ~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~ 217 (220)
T d1zrna_ 158 AEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVV 217 (220)
T ss_dssp HHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHH
T ss_pred HHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHH
Confidence 4444544456799999999999999999976443 2 1223333445788774 455444
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=96.82 E-value=0.00094 Score=60.66 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=76.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.|++.|+++.++|+... +....+..|+......++++++..... ..|+-=
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~K----------------P~~~~~ 151 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAASK----------------PAPDIF 151 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSSCT----------------TSTHHH
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccccccccccccccc----------------cChHHH
Confidence 34678999999999999999999999765 567788889988766666665543221 112221
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeCCCCcHHHHhccCEEEe
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMGKQGTDVCKEAADMILV 368 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~~~~~~~a~~~ad~v~~ 368 (608)
..+.+.++-....++|+||+.+|+.+-+.||+ .|+++ .+ .....++.++.
T Consensus 152 ~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~ 202 (221)
T d1o08a_ 152 IAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVP 202 (221)
T ss_dssp HHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEES
T ss_pred HHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC-Ch--hhcccccEEcC
Confidence 22333333334569999999999999999996 45554 22 22334555554
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.61 E-value=0.00035 Score=59.54 Aligned_cols=98 Identities=14% Similarity=0.062 Sum_probs=57.9
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHh--hcceEEEE---
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV--NSVTVFYR--- 309 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~--~~~~v~~r--- 309 (608)
++++.+++.+.++.++++|++++++||++......+.+.++.. ...+.... .....+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~----------------~~~~~~~~~~~~~~~~~~~~~ 97 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT----------------RKWVEDIAGVPLVMQCQREQG 97 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH----------------HHHHHHTTCCCCSEEEECCTT
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH----------------hhhhhhcCCCcEEEeeccccc
Confidence 5788999999999999999999999999732111000000000 00000000 00011111
Q ss_pred ---eCchhHHHHHHHHHHCC-CEEEEEcCCcCcHHHHHhCCee
Q psy16789 310 ---VTPRHKLTIVKAFQANG-VIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 310 ---~~p~~K~~~v~~l~~~g-~~v~~~GDg~ND~~al~~A~vg 348 (608)
..+.-|..+.+.+...+ ..++++||...|+.|.+++|+-
T Consensus 98 ~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 98 DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 11234556666665554 4567799999999999999964
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.48 E-value=0.00059 Score=63.83 Aligned_cols=44 Identities=14% Similarity=0.256 Sum_probs=32.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH----HcCCCCC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS----MVGLDTI 279 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~----~~gi~~~ 279 (608)
+++-+++.++|++|+++|++++++|+....+...+++ ..|+...
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~ 64 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVP 64 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCC
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCccc
Confidence 3334889999999999999999999876555555544 4455433
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.38 E-value=0.0016 Score=59.04 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=71.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGD----GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
+.+++.+.++.|+++|+++.++|+. ............|+....+.++++++..... ..|+
T Consensus 98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~K----------------P~p~ 161 (222)
T d1cr6a1 98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIK----------------PEPQ 161 (222)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCT----------------TCHH
T ss_pred CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCC----------------CChH
Confidence 5799999999999999999999963 3334445556667766555566555443211 1233
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeCCCCcHHH
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMGKQGTDVC 359 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~~~~~~~a 359 (608)
--..+.+.++-....++|+||..+|+.+-+.||+ +|.+. ++.+..
T Consensus 162 ~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~~ 207 (222)
T d1cr6a1 162 IYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASAL 207 (222)
T ss_dssp HHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHHH
T ss_pred HHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-CcchHH
Confidence 3334555555556779999999999999999997 55554 444443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=96.08 E-value=0.0097 Score=54.37 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=70.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+++++++ |+++.++|+.+...+....+..|+....+.++++++.....++ |+-=
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~----------------p~~f 153 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPH----------------PDSY 153 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTS----------------HHHH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCcc----------------HHHH
Confidence 345688899998885 7788999999999999999999998877777777765432211 2222
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
..+++.+.-....++++||+.+|+.+-+.||+.
T Consensus 154 ~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 154 ALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 234444444456699999999999999999964
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.98 E-value=0.0073 Score=54.33 Aligned_cols=25 Identities=28% Similarity=0.466 Sum_probs=23.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGD 262 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd 262 (608)
+.+++.++|++|+++|+++.++|..
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred ecccHHHHHHHHHhhCCeEEEeccc
Confidence 5699999999999999999999964
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.92 E-value=0.0026 Score=59.18 Aligned_cols=50 Identities=16% Similarity=0.263 Sum_probs=36.0
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHcCCCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTG---DGQETATAIASMVGLDTI 279 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~~~ 279 (608)
|++.-.+.+=+++.++|+.++++|++++++|+ +........-+++|++.+
T Consensus 12 GTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 12 GVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 33333444457899999999999999999984 555666555667887544
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.75 E-value=0.0035 Score=55.85 Aligned_cols=90 Identities=20% Similarity=0.272 Sum_probs=63.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHcCCCCCCC--ccccchhhcccCHHHHHHHhhcceEEEEeC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDG----QETATAIASMVGLDTIHG--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVT 311 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~ 311 (608)
+.+++.+.++.+++.|++|..+|||. ..|++++.+.+|+..... ..+.+++ ..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~---------------------~~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK---------------------PG 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC---------------------TT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC---------------------CC
Confidence 45799999999999999999999986 447777778889865431 1111111 01
Q ss_pred chhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCC-eeEEeC
Q psy16789 312 PRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKAD-IGIAMG 352 (608)
Q Consensus 312 p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~-vgia~~ 352 (608)
-..|.+.++ + ...++++||..+|..+-.+|+ -+|-+-
T Consensus 146 K~~rr~~Ik---~-y~I~l~~GD~l~Df~aA~eagi~~iRi~ 183 (209)
T d2b82a1 146 QNTKSQWLQ---D-KNIRIFYGDSDNDITAARDVGARGIRIL 183 (209)
T ss_dssp CCCSHHHHH---H-TTEEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred chHHHHHHH---H-cCeEEEecCCHHHHhHHHHcCCCceEee
Confidence 123444443 3 467889999999999999999 466653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.73 E-value=0.014 Score=54.23 Aligned_cols=48 Identities=21% Similarity=0.221 Sum_probs=35.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHcCCCCCCCcc
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTG---DGQETATAIASMVGLDTIHGKV 283 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~~~~~~v 283 (608)
+++=+++.++++.|+++|++++++|+ ++........+.+|+......+
T Consensus 22 ~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~~~v 72 (261)
T d1vjra_ 22 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAV 72 (261)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGE
T ss_pred CccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccccccee
Confidence 44447899999999999999999985 4555556666778886544433
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.56 E-value=0.0034 Score=56.38 Aligned_cols=99 Identities=11% Similarity=0.063 Sum_probs=62.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHH----HHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQE----TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~----ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
+.+++.+.++.|++.|+++.++|+.... .........++....+.++.+++..... ..|+
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~K----------------P~~~ 163 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVK----------------PEPQ 163 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCT----------------TCHH
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccch----------------hHHH
Confidence 5789999999999999999999975432 2222233334444444455444432211 1122
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeC
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMG 352 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~ 352 (608)
-=..+++.+.-....++|+||+..|+.+-+++|+ +|.+.
T Consensus 164 ~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 164 IYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 2223444444444668899999999999999998 55554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.51 E-value=0.0096 Score=53.59 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=76.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccc-cchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVL-SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi-~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.+.+++.+.+++++ .+..++|+.....+..+.+.+|+.......+ ++++..... +...|+.=
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~--------------~KP~~~~~ 147 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADR--------------VKPKPDIF 147 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTC--------------CTTSSHHH
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeecccccccccc--------------cccCHHHH
Confidence 45688888877665 4567899999999999999999987654433 222211100 00112222
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCc-------HH-HHhccCEEEecCCcchHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGT-------DV-CKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~-------~~-a~~~ad~v~~~~~~~~i~~~i 379 (608)
..+.+.+.-....++++||+.+|+.+-+.||+- |++. .+. +. ...-+|+++. ++..+..+|
T Consensus 148 ~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~--~l~eL~~ll 217 (222)
T d2fdra1 148 LHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 217 (222)
T ss_dssp HHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred HHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 234444444456799999999999999999963 3343 111 11 2234899886 566666555
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.09 E-value=0.0077 Score=55.85 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=24.2
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCc
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDG 263 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~ 263 (608)
.+.+=+++.++++.|+++|++++++|+..
T Consensus 16 ~~~~i~~a~e~l~~l~~~g~~~~~~TN~s 44 (253)
T d1wvia_ 16 GKDRIPAGEDFVKRLQERQLPYILVTNNT 44 (253)
T ss_dssp TTEECHHHHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCcCccHHHHHHHHHHCCCCEEEEeCCC
Confidence 34445889999999999999999999753
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.48 E-value=0.03 Score=50.02 Aligned_cols=138 Identities=21% Similarity=0.323 Sum_probs=85.8
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-Cccccchhhc-----------------ccCHHHH---
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQID-----------------QMTEHQL--- 297 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~-----------------~~~~~~~--- 297 (608)
-|++.++++.+++. ....++|-.-.+...++|+.+|+.... ..-++-+++. +.+-+++
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~ 161 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRK 161 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHHH
Confidence 48999999999876 466666667778889999999995220 0111111111 0011111
Q ss_pred ----------HHHhhcceEEEEeCchhHHHHHHHHH-HCCCE-EEEEcCCcCcHHHHHhCCe--eEEeCCCCcHHHHhcc
Q psy16789 298 ----------QQVVNSVTVFYRVTPRHKLTIVKAFQ-ANGVI-VGMTGDGVNDGVALKKADI--GIAMGKQGTDVCKEAA 363 (608)
Q Consensus 298 ----------~~~~~~~~v~~r~~p~~K~~~v~~l~-~~g~~-v~~~GDg~ND~~al~~A~v--gia~~~~~~~~a~~~a 363 (608)
.+++.++... -...|..+++..- ..+.. .+++||+..|+.|++.|.= |++++-||..-+-..|
T Consensus 162 ~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA 238 (308)
T d1y8aa1 162 LDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHA 238 (308)
T ss_dssp HHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTC
T ss_pred HHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccccc
Confidence 1222222222 1134555555432 22322 3669999999999998752 6666668999999999
Q ss_pred CEEEecCCcchHHHHHH
Q psy16789 364 DMILVDDDFNTIIAAIE 380 (608)
Q Consensus 364 d~v~~~~~~~~i~~~i~ 380 (608)
|+.+.+.+-..+..++.
T Consensus 239 ~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 239 DVVIISPTAMSEAKVIE 255 (308)
T ss_dssp SEEEECSSTHHHHHHHH
T ss_pred ceEEeccchhHHHHHHH
Confidence 99999888777766664
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=94.24 E-value=0.0075 Score=51.77 Aligned_cols=25 Identities=24% Similarity=0.337 Sum_probs=23.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGD 262 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd 262 (608)
+-|++.++++.|+++|+++.++|..
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred ECccHHHHHHHHHHcCCceeeeccc
Confidence 5689999999999999999999975
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=93.31 E-value=0.0028 Score=55.48 Aligned_cols=97 Identities=13% Similarity=0.152 Sum_probs=58.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc-CCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH-
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV-GLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK- 315 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K- 315 (608)
+.+++.+.++.+++.|+++.++|+-+...+....... |+......++++++... ..|..+
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~------------------~Kp~~~~ 146 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM------------------RKPEARI 146 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC------------------CTTCHHH
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccc------------------cccchHH
Confidence 5789999999999999999999876544332222221 22222222222222111 112222
Q ss_pred -HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeC
Q psy16789 316 -LTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMG 352 (608)
Q Consensus 316 -~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~ 352 (608)
..+.+.+.-....++|+||+.+|+.+-+.||+ +|.+.
T Consensus 147 ~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 147 YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 13333343345679999999999999999997 56555
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=93.17 E-value=0.012 Score=48.95 Aligned_cols=117 Identities=12% Similarity=0.160 Sum_probs=72.6
Q ss_pred eEEEEccchhh--hhccccceeeeccccCCCccHHHHHHHHHHcCccc-cccccccceeeeCChHHHHHHhHhhhcCCcC
Q psy16789 111 TRFFFLHRLLE--VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYA-VNEHYVRLKEYPFSSEQKMMAVRVHKIGHNL 187 (608)
Q Consensus 111 ~~~~~~kg~~e--i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~-~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~ 187 (608)
..++..+|..| ++.++..+.. ..-.|...|++++|++.+... ...++......||+...+...+.+. ...
T Consensus 5 td~ip~~G~~~~ell~~AA~aE~----~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---g~~ 77 (136)
T d2a29a1 5 SEFIPAQGVDEKTLADAAQLASL----ADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINID---NRM 77 (136)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHH----TCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEET---TEE
T ss_pred ceEEeCCCCCHHHHHHHHHHHhC----CCCchHHHHHHHHHHHhcCCCccccccccccccccccccceEEEEEC---CEE
Confidence 35677788776 6666544332 234799999999998754322 2234455555666655432221111 111
Q ss_pred CCCchhH-----------HHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCC
Q psy16789 188 PSKRDGK-----------MILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPR 239 (608)
Q Consensus 188 ~~kg~~~-----------~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r 239 (608)
...|... .+.+++.+.+++++.+|..++.+|... .++|++++.|++|
T Consensus 78 v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-----~~~G~i~l~D~iK 135 (136)
T d2a29a1 78 IRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-----RVLGVIALKDIVK 135 (136)
T ss_dssp EEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-----EEEEEEEEEESSC
T ss_pred EEecHHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-----EEEEEEEEEeecC
Confidence 2223322 112345667888999999999999754 8999999999986
|