Psyllid ID: psy16828

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
Protein Sequence
MVVISLSDTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ
Secondary Structure (PSIPRED)
ccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHHccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHcccccccccccccccccEccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHEEEEEEcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHccccccccccccccEccccHHHHHHHHcc
Coil and Loop (DISEMBL)
mvvislsdteaiepkpskyikvecpvcgkvlSRKSKLVSHMRSfhtsvtpeaggdnndtsghMSQIQTMLMldhkkpksrapvecsycgkvlsrkdkLTRHIAAvhsgkeypceqcdrkftngyklKQHMLTHMQKDTSISIDVISEIkkfkcdqcdyatkdkynlgthikrrhtkeYSVLctqcgfgcytnreleehqilthgaepyhckycdktftkrmnvkthermkhenhkpyecyiCNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMAlhsdakpfvcnicgkdfklkyYVNLHMrthtrirptfecdvchqifptdfrtkhmlvhdvekshlcfvcgagfvndaglkvhMRKHQ
Flexible Loop (DISEMBL)
mvvislsdteaiepkpskyikvecpvCGKVLSRKSKLVSHMRSfhtsvtpeaggdnndTSGHMSQIQTMLMLDHKKPksrapvecsycgkvlsrkdkLTRHIAAvhsgkeypceqcdRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKkfkcdqcdyatkdkynlgthikrrhtkeysVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKThermkhenhkpyeCYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ
Low Complexity Region (SEG)
MVVISLSDTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ
Disordered region (IsUnstruct)
*****************KYIKVECPVCGKVLSR*************************************************VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKV******
Disordered Region (DISOPRED)
*VVISLSDTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRK**
Disordered Region (DISEMBL)
MVVISLSDTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLD***********CSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ
Disordered Region (DISPRO)
*****LSDTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVH*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVVISLSDTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	372	2.2.26 [Sep-21-2011]
P10076	861	Zinc finger protein 26 OS	no	N/A	0.881	0.380	0.327	8e-41
Q80W31	679	Zinc finger protein 569 O	no	N/A	0.881	0.483	0.323	1e-39
Q5MCW4	686	Zinc finger protein 569 O	yes	N/A	0.881	0.478	0.320	5e-39
A2VDQ7	687	Zinc finger protein 420 O	no	N/A	0.879	0.475	0.323	6e-39
Q8TAQ5	688	Zinc finger protein 420 O	no	N/A	0.879	0.475	0.321	2e-38
P51523	738	Zinc finger protein 84 OS	no	N/A	0.884	0.445	0.305	4e-38
Q02386	682	Zinc finger protein 45 OS	no	N/A	0.903	0.492	0.300	2e-37
Q3ZCX4	644	Zinc finger protein 568 O	no	N/A	0.922	0.532	0.293	2e-37
Q9HCG1	818	Zinc finger protein 160 O	no	N/A	0.879	0.399	0.301	4e-37
Q9UJW8	692	Zinc finger protein 180 O	no	N/A	0.806	0.433	0.319	5e-37

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  167 bits (424), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 159/351 (45%), Gaps = 23/351 (6%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           EC  CGK   + S+L  HMRS HT   P       D  G+     + L    +      P
Sbjct: 303 ECKECGKTFIQPSRLTEHMRS-HTGEKPY----QCDQCGNAFASSSYLTTHLRTHTGEKP 357

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISI 142
            EC+ CGK  +R   L  HI      K Y C+ C + F+    L  H+  H  +      
Sbjct: 358 FECNICGKAFTRSSYLLGHIRTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTGE------ 411

Query: 143 DVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILT 202
                 + + C +C+ A      L  HIK  HT E    C  C      +  L+ H  + 
Sbjct: 412 ------RPYPCTECEKAFTSFAQLTEHIKT-HTGEKPFRCKVCARTFRNSSCLKTHFRIH 464

Query: 203 HGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLA 262
            G +PY C YC K FT R  +  H  + H   KPYEC  C K   +   L EH+ ++H  
Sbjct: 465 TGIKPYKCNYCGKAFTARSGLTKH-VLIHNGEKPYECKECGKAFSTSSGLVEHI-RIHTG 522

Query: 263 QR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPT 321
           ++ FEC  C K +    +   H+  H+  KPF CN C K F    Y+ +HMRTHT  +P 
Sbjct: 523 EKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTGEKP- 581

Query: 322 FECDVCHQIFPT-DFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           +EC  C + FP     TKH+  H  E+ + C  CG GF++ A L VH++ H
Sbjct: 582 YECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTH 632

May be involved in transcriptional regulation.
Mus musculus (taxid: 10090)

>sp|Q80W31|ZN569_MOUSE Zinc finger protein 569 OS=Mus musculus GN=Znf569 PE=2 SV=2

 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 162/349 (46%), Gaps = 21/349 (6%)

Query: 24  CPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPV 83
           C  CGK   R + L  HMR  HT   P       D  G      +ML++  +      P 
Sbjct: 321 CNECGKAFPRVASLALHMRG-HTGEKPY----KCDKCGKAFSQFSMLIIHVRVHTGEKPY 375

Query: 84  ECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISID 143
           EC  CGK  S+   LT HI +    K Y C++C + F++    K++ +TH +        
Sbjct: 376 ECGECGKAFSQSSALTVHIRSHTGEKPYECKECRKSFSH----KKNFITHQK-------- 423

Query: 144 VISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTH 203
           + +  K + C++C  A     NL  H +R HT E   LC +CG        L  H+ +  
Sbjct: 424 IHTREKPYGCNECGKAFIQMSNLVRH-QRIHTGEKPYLCKECGKAFSQKSNLIAHEKIHS 482

Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQ 263
           G +PY C  C K F+++ N  TH+++ H   KPY+C  C K       L  HL      +
Sbjct: 483 GEKPYECNECGKAFSQKQNFITHQKV-HTGEKPYDCNKCGKAFSQIASLTLHLRSHTGEK 541

Query: 264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFE 323
            +EC+ C K          HM  H+  KP+VCN CGK F  +  + +HMR HT  +P +E
Sbjct: 542 PYECEKCGKAFSQCSLLNLHMRSHTGEKPYVCNECGKAFSQRTSLIVHMRGHTGEKP-YE 600

Query: 324 CDVCHQIFP-TDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           C+ C + F  +   T H+  H  EK   C  CG  F   + L +HMRKH
Sbjct: 601 CNKCGKAFSQSSSLTIHIRGHTGEKPFDCSNCGKAFSQISSLTLHMRKH 649

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5MCW4|ZN569_HUMAN Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 PE=2 SV=1

 Score =  162 bits (409), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 164/349 (46%), Gaps = 21/349 (6%)

Query: 24  CPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPV 83
           C  CGK   R + L  HMRS HT   P       D  G      +ML++  +      P 
Sbjct: 328 CNECGKAFPRIASLALHMRS-HTGEKPYKC----DKCGKAFSQFSMLIIHVRIHTGEKPY 382

Query: 84  ECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISID 143
           EC+ CGK  S+   LT H+ +    K Y C++C + F++    K++ +TH +        
Sbjct: 383 ECNECGKAFSQSSALTVHMRSHTGEKPYECKECRKAFSH----KKNFITHQK-------- 430

Query: 144 VISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTH 203
           + +  K ++C++C  A     NL  H +R HT E   +C +CG        L  H+ +  
Sbjct: 431 IHTREKPYECNECGKAFIQMSNLVRH-QRIHTGEKPYICKECGKAFSQKSNLIAHEKIHS 489

Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQ 263
           G +PY C  C K F+++ N  TH+++ H   KPY+C  C K       L  HL      +
Sbjct: 490 GEKPYECNECGKAFSQKQNFITHQKV-HTGEKPYDCNECGKAFSQIASLTLHLRSHTGEK 548

Query: 264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFE 323
            +EC  C K          HM  H+  KP+VCN CGK F  +  + +HMR HT  +P +E
Sbjct: 549 PYECDKCGKAFSQCSLLNLHMRSHTGEKPYVCNECGKAFSQRTSLIVHMRGHTGEKP-YE 607

Query: 324 CDVCHQIFP-TDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           C+ C + F  +   T H+  H  EK   C  CG  F   + L +HMRKH
Sbjct: 608 CNKCGKAFSQSSSLTIHIRGHTGEKPFDCSKCGKAFSQISSLTLHMRKH 656

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A2VDQ7|ZN420_BOVIN Zinc finger protein 420 OS=Bos taurus GN=ZNF420 PE=2 SV=1

 Score =  162 bits (409), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 162/352 (46%), Gaps = 25/352 (7%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           EC  CGK  SR S+L  H R  HT   P A  +        SQ    L+L H+      P
Sbjct: 167 ECKQCGKAFSRDSQLSLHQR-LHTGEKPYACKECGKAFTQSSQ----LILHHRIHTGEKP 221

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
            +C  CGK   R  +LTRH   VH+G K Y C++C + FT   +L  H   H  +     
Sbjct: 222 YKCEECGKAFIRSSQLTRH-QKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTGE----- 275

Query: 142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                  K ++C +C         L  H KR HT E    C +CG       +L +HQ +
Sbjct: 276 -------KLYECKECRKVFTQLSQLILH-KRIHTGEKPYECKECGKAFICGSQLSQHQKI 327

Query: 202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
            +G +PY C+ C K F +   +  H+R+ H   KPY+C  C K  +   +L +H  ++H 
Sbjct: 328 HNGEKPYECQECGKAFIRGSLLMQHQRI-HTGEKPYKCEECGKAFIRGSQLTQH-QRIHT 385

Query: 262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
            ++ +ECK C KT        +H  +H+  KP+ C  CGK F     +  H R HT  +P
Sbjct: 386 NEKPYECKECGKTFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKP 445

Query: 321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
            +EC  C + F      T+H  +H  EK + C  CG  F+  + L  H R H
Sbjct: 446 -YECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIH 496

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q8TAQ5|ZN420_HUMAN Zinc finger protein 420 OS=Homo sapiens GN=ZNF420 PE=2 SV=1

 Score =  160 bits (404), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 161/352 (45%), Gaps = 25/352 (7%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           EC  CGK  SR S+L  H R  HT   P A  +        SQ    L+L H+      P
Sbjct: 168 ECKQCGKAFSRDSQLSLHQR-LHTGEKPYACKECGKAFTQSSQ----LILHHRIHTGEKP 222

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
            +C  CGK   R  +LTRH   VH+G K Y C++C + FT   +L  H   H  +     
Sbjct: 223 YKCEECGKAFIRSSQLTRH-QKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTGE----- 276

Query: 142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                  K ++C +C         L  H KR HT E    C +CG       +L +HQ +
Sbjct: 277 -------KLYECKECRKVFTQLSQLILH-KRIHTGEKPYECKECGKAFICGSQLSQHQKI 328

Query: 202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
            +G +PY CK C + F +   +  H+R+ H   KPY+C  C K  +   +L +H  ++H 
Sbjct: 329 HNGEKPYECKECGRAFIRGSLLMQHQRI-HTGEKPYKCEECGKAFIRGSQLTQH-QRIHT 386

Query: 262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
            ++ +ECK C K         +H  +H+  KP+ C  CGK F     +  H R HT  +P
Sbjct: 387 NEKPYECKECGKMFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKP 446

Query: 321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
            +EC  C + F      T+H  +H  EK + C  CG  F+  + L  H R H
Sbjct: 447 -YECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIH 497

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P51523|ZNF84_HUMAN Zinc finger protein 84 OS=Homo sapiens GN=ZNF84 PE=1 SV=2

 Score =  159 bits (401), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 152/350 (43%), Gaps = 21/350 (6%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           EC  C K    +S L++H R+ HT   P             S + +  M          P
Sbjct: 404 ECSECRKAFRERSSLINHQRT-HTGEKPHGCIQCGKAFSQKSHLISHQMTH----TGEKP 458

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISI 142
             CS CGK  SRK +L RH       K Y C +C + F+    L  H   H  +      
Sbjct: 459 FICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGE------ 512

Query: 143 DVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILT 202
                 K + C +C  A   K +L +H +R HT E    C++CG        L  HQ   
Sbjct: 513 ------KPYVCSECGKAFCQKSHLISH-QRTHTGEKPYECSECGKAFGEKSSLATHQRTH 565

Query: 203 HGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLA 262
            G +PY C+ C+K F+++  + TH+R+ H   KPYEC +C K    +  L  HL      
Sbjct: 566 TGEKPYECRDCEKAFSQKSQLNTHQRI-HTGEKPYECSLCRKAFFEKSELIRHLRTHTGE 624

Query: 263 QRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTF 322
           + +EC  C K    + +   H  +H+  KPF C+ CGK F  K ++  H RTHT  +P +
Sbjct: 625 KPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGEKP-Y 683

Query: 323 ECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
            C  C + F    +   H  +H  EK + C  CG  F   + L  H R H
Sbjct: 684 GCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQRTH 733

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q02386|ZNF45_HUMAN Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE=2 SV=2

 Score =  157 bits (396), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 167/369 (45%), Gaps = 33/369 (8%)

Query: 24  CPVCGKVLSRKSKLVSHMRSFHTSVTP---EAGGDNNDTSGHMSQIQTMLMLDHKKPKSR 80
           C  CGK  S +S+L +H R  HT   P    A G +   S H++ I   +    K     
Sbjct: 306 CEECGKSFSWRSRLQAHER-IHTGEKPYKCNACGKSFSYSSHLN-IHCRIHTGEK----- 358

Query: 81  APVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQK---- 136
            P +C  CGK  S    L  H  +    K Y CE+C + F     L  H   H  +    
Sbjct: 359 -PYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQ 417

Query: 137 ------------DTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQ 184
                       D +I   V +  K +KC++C        NL  H +R HT E    C  
Sbjct: 418 CDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAH-QRGHTGEKPYKCGT 476

Query: 185 CGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNK 244
           CG G   + +L  H  +  G +PY C+ C K F++  +++ H+R+ H   KPY+C  C K
Sbjct: 477 CGKGFSRSSDLNVHCRIHTGEKPYKCERCGKAFSQFSSLQVHQRV-HTGEKPYQCAECGK 535

Query: 245 ILVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFK 303
                 +L  H  + H  ++ ++C+ C K       F  H  +H+  KP+ C++CGK F+
Sbjct: 536 GFSVGSQLQAH-QRCHTGEKPYQCEECGKGFCRASNFLAHRGVHTGEKPYRCDVCGKRFR 594

Query: 304 LKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHMLVHDVEKSHLCFVCGAGFVNDA 362
            + Y+  H R HT  RP ++C+ C ++F  + +   H  VH  EK + C  CG GF   +
Sbjct: 595 QRSYLQAHQRVHTGERP-YKCEECGKVFSWSSYLQAHQRVHTGEKPYKCEECGKGFSWSS 653

Query: 363 GLKVHMRKH 371
            L +H R H
Sbjct: 654 SLIIHQRVH 662

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q3ZCX4|ZN568_HUMAN Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2

 Score =  156 bits (395), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 167/392 (42%), Gaps = 49/392 (12%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQI---------------- 66
           EC  CGK  SRK  L++H +  HT   P    +       MS +                
Sbjct: 251 ECKECGKAFSRKENLITHQK-IHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACK 309

Query: 67  -------QTMLMLDHKKP-KSRAPVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCD 117
                  Q   +++H++      P EC  CGK  S+K  L  H   +H+G K Y C +C 
Sbjct: 310 DCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEH-EKIHTGEKPYACNECG 368

Query: 118 RKFTNGYKLKQHMLTHMQKD-----------TSISIDVI-----SEIKKFKCDQCDYATK 161
           R F+    +  HM +H  +            +  S+ +I     +  K + C +C  A  
Sbjct: 369 RAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFS 428

Query: 162 DKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRM 221
              +L  H+ R HT E    C +CG        L  HQ +  G +PY C  C K F +  
Sbjct: 429 QSSSLTVHM-RNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMS 487

Query: 222 NVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTF 280
           N+  H+R+ H   KPY C +C K    +  L EH  ++H  ++ + C  C K     +  
Sbjct: 488 NLIRHQRI-HTGEKPYACTVCGKAFSQKSNLTEH-EKIHTGEKPYHCNQCGKAFSQRQNL 545

Query: 281 KKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPT-DFRTKH 339
            +H  +H+  KPF CN CGK F     + LH+R+HT  +P +EC+ C + F        H
Sbjct: 546 LEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGEKP-YECNKCGKAFSQCSLLIIH 604

Query: 340 MLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           M  H  EK   C  CG  F   A L +H R H
Sbjct: 605 MRSHTGEKPFECNECGKAFSQRASLSIHKRGH 636

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9HCG1|ZN160_HUMAN Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3

 Score =  155 bits (393), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 163/352 (46%), Gaps = 25/352 (7%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +C  CGK+ ++ S L+SH R  HT   P    +     G    +++ L +         P
Sbjct: 370 KCNECGKLFTQNSHLISHWR-IHTGEKPYKCNE----CGKAFSVRSSLAIHQTIHTGEKP 424

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
            +C+ CGKV      L RH   VH+G K Y C +C + F+    L  H + H        
Sbjct: 425 YKCNECGKVFRYNSYLGRH-RRVHTGEKPYKCNECGKAFSMHSNLATHQVIH-------- 475

Query: 142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
               +  K FKC++C         L  H +R HT E    C +CG        L  HQ +
Sbjct: 476 ----TGTKPFKCNECSKVFTQNSQLANH-RRIHTGEKPYKCNECGKAFSVRSSLTTHQAI 530

Query: 202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
             G +PY C  C K+FT++ ++++H R  H   KPY+C  C K+     +L  H  +VH 
Sbjct: 531 HSGEKPYKCIECGKSFTQKSHLRSH-RGIHSGEKPYKCNECGKVFAQTSQLARHW-RVHT 588

Query: 262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
            ++ ++C  C +      +   H A+H+  KP+ C+ CGK F+   Y+  H R HT  +P
Sbjct: 589 GEKPYKCNDCGRAFSDRSSLTFHQAIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGEKP 648

Query: 321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
            ++C+ C + F      T H ++H  EK + C  CG  F  ++ L  H R H
Sbjct: 649 -YKCNECGKAFSMHSNLTTHKVIHTGEKPYKCNQCGKVFTQNSHLANHQRTH 699

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UJW8|ZN180_HUMAN Zinc finger protein 180 OS=Homo sapiens GN=ZNF180 PE=1 SV=2

 Score =  155 bits (392), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 149/351 (42%), Gaps = 51/351 (14%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           EC  CGK  S  S LV+H R+ HT                                   P
Sbjct: 354 ECNQCGKSFSWSSHLVAHQRT-HTG--------------------------------EKP 380

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISI 142
            ECS CGK  SR   L  H       K Y C QC + F+  Y L  H  TH  +      
Sbjct: 381 YECSECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGE------ 434

Query: 143 DVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILT 202
                 K ++C+QC  + +  Y L  H +R HT E    C QCG     + +L  HQ + 
Sbjct: 435 ------KPYECNQCGKSFRQSYKLIAH-QRTHTGEKPYECNQCGKSFIQSYKLIAHQRIH 487

Query: 203 HGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLA 262
            G +PY C  C K+F++   +  H+R  H   KP+EC  C K      +L  H  + H  
Sbjct: 488 TGEKPYECNQCGKSFSQSYKLVAHQRT-HTGEKPFECNQCGKSFSWSSQLVAH-QRTHTG 545

Query: 263 QR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPT 321
           ++ +EC  C K+         H  +H+  KP+ CN CGK F   Y + +H RTHT  +P 
Sbjct: 546 EKPYECSECGKSFNRSSHLVMHQRIHTGEKPYECNQCGKSFSQSYVLVVHQRTHTGEKP- 604

Query: 322 FECDVCHQIF-PTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           +EC  C + F  +   T+H   H  EK   C  CG  F   A L VH R H
Sbjct: 605 YECSQCGKSFRQSSCLTQHQRTHTGEKPFECNQCGKTFSLSARLIVHQRTH 655

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
334327315	1486	PREDICTED: hypothetical protein LOC10061	0.881	0.220	0.327	7e-42
334327291	1137	PREDICTED: zinc finger protein 184-like	0.876	0.286	0.318	1e-41
334349670	1109	PREDICTED: zinc finger protein 850-like	0.879	0.294	0.335	4e-41
395540052	718	PREDICTED: zinc finger protein 850-like	0.911	0.472	0.326	4e-40
334327353	1783	PREDICTED: hypothetical protein LOC10001	0.879	0.183	0.303	4e-40
334325100	752	PREDICTED: zinc finger protein 160-like	0.911	0.450	0.315	7e-40
334327357	764	PREDICTED: zinc finger protein 420-like	0.879	0.428	0.328	9e-40
326678763	452	PREDICTED: zinc finger protein 420-like	0.868	0.714	0.326	2e-39
334349402	791	PREDICTED: zinc finger protein 160-like	0.913	0.429	0.305	2e-39
334313269	509	PREDICTED: zinc finger protein 420-like	0.927	0.677	0.335	3e-39

>gi|334327315|ref|XP_003340863.1| PREDICTED: hypothetical protein LOC100617363 [Monodelphis domestica]

 Score =  177 bits (449), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 154/351 (43%), Gaps = 23/351 (6%)

Query: 23   ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            EC  CGK  +R S L  H R  HT   P        T    S     L +  +      P
Sbjct: 877  ECKQCGKTFTRTSSLAIHQR-IHTGEKPYECTQCGKTFNQRSH----LTVHQRIHTGEKP 931

Query: 83   VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISI 142
             +C  CGK  +++  L  H       K Y C+QC + FT    L  H   H  +      
Sbjct: 932  YKCKQCGKTFTQRSGLFVHQRMYTGEKPYECKQCGKTFTRTSSLAIHQRIHTGE------ 985

Query: 143  DVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILT 202
                  K ++C QC      K++L  H +R HT E    C QCG        L  HQ + 
Sbjct: 986  ------KPYECKQCGKTFNQKFHLALH-QRLHTGEKPYECKQCGKTFNQRSHLAIHQRIH 1038

Query: 203  HGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLA 262
             G +PY CK C KTF +R ++  H+RM H   KPYEC  C K    R  L  H  ++H  
Sbjct: 1039 TGEKPYECKQCGKTFIQRSSLAVHQRM-HTGEKPYECKQCGKTFKRRSYLAVH-QRMHTG 1096

Query: 263  QR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPT 321
            ++ +ECK C KT         H+ +H+  KP+ CN CGK F     + +H R HT  +P 
Sbjct: 1097 EKLYECKQCGKTFKRRSYLAVHLRIHTGEKPYECNQCGKTFTSTSSLAVHQRMHTGEKP- 1155

Query: 322  FECDVCHQIFP-TDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
            +EC+ C + F  T     H  +H  EK + C  CG  F   + L VH R H
Sbjct: 1156 YECNQCGKTFACTSSLAVHQRMHTGEKPYECNQCGNTFNQRSYLVVHQRIH 1206

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334327291|ref|XP_001369311.2| PREDICTED: zinc finger protein 184-like [Monodelphis domestica]

 Score =  177 bits (448), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 112/352 (31%), Positives = 157/352 (44%), Gaps = 26/352 (7%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKS-RA 81
           EC  C K  S++++   H R  HT   P    +        SQ+      +H++  +   
Sbjct: 354 ECHECEKTFSQRTEFRQHHR-IHTGEKPHECNECGKAFRRSSQLS-----EHQRIHTGEK 407

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSI 140
           P EC  CGK   ++ KLTRH   +H+G K + C +C + F     L QH   H  +    
Sbjct: 408 PYECQQCGKAFRQRSKLTRH-QRIHTGEKTHVCNECGKAFHQSSALIQHQTIHTGE---- 462

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQI 200
                   K ++C +C  A         H +R HT E    C +CG   +    L EHQ 
Sbjct: 463 --------KPYECQECGKAFSLSTRFIVH-QRIHTGEKPYECQECGKAFHQRTGLTEHQR 513

Query: 201 LTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVH 260
           +  G   Y C  C KTF +R  +  H+R+ H   KPYEC  C K    R RL +H  ++H
Sbjct: 514 IHTGERAYECNKCGKTFCQRTGLTQHQRI-HTGEKPYECKECGKAFCQRTRLTQH-QRIH 571

Query: 261 LAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR 319
             ++ +ECK C K    +    +H  +H+  KPF C  CGK F L   ++ H R HT  +
Sbjct: 572 TGEKPYECKECGKAFRVKTLLTQHQIIHTGEKPFECKECGKAFHLSTGLSEHQRIHTGEK 631

Query: 320 PTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           P +EC  C + F      KH  +H  EK   C  CG  F    GL  H R H
Sbjct: 632 P-YECSECGKAFRWSAGLKHQRIHTGEKPFECNECGKAFRLSIGLTEHQRNH 682

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334349670|ref|XP_001368486.2| PREDICTED: zinc finger protein 850-like [Monodelphis domestica]

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 167/352 (47%), Gaps = 25/352 (7%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +C  CGK   R++KL  H R  HT   P       +  G   + + +L+L  +    + P
Sbjct: 190 KCNQCGKTFIRRTKLTVHQR-IHTGEKP----FECNQCGKAFRGRDVLILHQRIHTGQKP 244

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
            +C+ CGK  S+K  LT H   +H+G K Y C QC + F +   + +H   H  +     
Sbjct: 245 FDCNQCGKAFSQKSGLTEH-QRIHTGEKPYECNQCGKAFRSRNSMVKHQRIHTGQ----- 298

Query: 142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                  K FKC+QC  A   K  L  H +R HT E    C QCG        L  HQ +
Sbjct: 299 -------KPFKCNQCGKAFIHKSTLTVH-QRIHTGEKPFECNQCGKAFRGRDVLILHQRI 350

Query: 202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
             G +P+ C  C K F+++  +  H+R+ H   KPYEC  C K  + R RL  H  ++H 
Sbjct: 351 HTGQKPFDCNQCGKAFSQKSGLTEHQRI-HTGEKPYECNQCGKAFIQRNRLIVH-QRMHT 408

Query: 262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
            ++ FEC LC K    +     H  +H+  KP+ CN CGK F  +  + +H R HT  +P
Sbjct: 409 GEKPFECSLCGKAFTEKSGLTAHQRIHTGEKPYECNQCGKAFIWRNKLTIHQRIHTGEKP 468

Query: 321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
            FEC+ C + F    + T H  +H  EK   C  CG  F   +GL VH R H
Sbjct: 469 -FECNQCGKAFIQKTKLTVHQRIHTGEKPFECNQCGKAFSQKSGLTVHQRIH 519

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395540052|ref|XP_003771975.1| PREDICTED: zinc finger protein 850-like [Sarcophilus harrisii]

 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 172/368 (46%), Gaps = 29/368 (7%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +C  C K  +RK  L  H +S HT   P       D  G   +++++L    +    + P
Sbjct: 352 KCNQCEKAFTRKGDLNKH-QSVHTGEKPY----KCDQCGKAFRLRSILAHHQRTHTGKKP 406

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
            EC  CGK  ++K  L  H   +H+G K + C QC + FTN YKL     TH  K     
Sbjct: 407 FECIQCGKAFTQKGNLVEH-QRIHAGEKPFECNQCGKAFTNKYKLADPQTTHTAKKPFEC 465

Query: 142 ID----------------VISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQC 185
           I                 V +  K F+C+QC  A +  ++L  H +R HT E S  C QC
Sbjct: 466 IQCGKAFTLKRNLVGHQRVHTREKYFECNQCGKAFRFNHSLAEH-QRIHTGEKSFECNQC 524

Query: 186 GFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKI 245
           G        L EHQ +    +PY C  C K FT++  +  H+ + H+  KPY+C  C K 
Sbjct: 525 GKAFIRKAYLTEHQRIHTEGKPYKCNQCGKAFTRKAYLTEHQGI-HKGEKPYKCNQCEKA 583

Query: 246 LVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKL 304
                +L EH  ++H  ++ FEC  C K    +    KH ++H+  KP+ C+ CGK F+L
Sbjct: 584 FTYSCKLAEH-QRIHTGEKPFECDQCGKAFTRKGDLNKHQSIHTGEKPYKCDQCGKAFRL 642

Query: 305 KYYVNLHMRTHTRIRPTFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAG 363
              +  H R HT  +P FEC+ C + F  +    +H  +H  EK   C  CG  F+  A 
Sbjct: 643 SSILAHHQRIHTGKKP-FECNQCGKAFRFNHSLAEHQRIHTGEKPFKCNQCGKSFIRKAR 701

Query: 364 LKVHMRKH 371
           L VH R H
Sbjct: 702 LTVHQRTH 709

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334327353|ref|XP_001371662.2| PREDICTED: hypothetical protein LOC100018428 [Monodelphis domestica]

 Score =  171 bits (434), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 107/352 (30%), Positives = 154/352 (43%), Gaps = 25/352 (7%)

Query: 23   ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            +C  CGK    ++    H R  HT   P        T    SQ    L + H+      P
Sbjct: 1449 KCNQCGKTFRYRNVFAKHQR-IHTGEKPYECRQCGKTFTSNSQ----LAVHHRIHTGEKP 1503

Query: 83   VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
             +C  CGK   R+D+L  H+  +H+G K + C+QC++ F     L +H  TH  +     
Sbjct: 1504 YDCKQCGKAFIRRDQLAVHLR-IHTGEKPHECKQCEKTFNRKSSLAEHQKTHTGE----- 1557

Query: 142  IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                   K ++C QC        +L  H +R HT E    C QCG           HQ +
Sbjct: 1558 -------KPYECKQCGKTFSHSSSLAAH-QRIHTGEKPYDCKQCGKTFSQRSHFAAHQRI 1609

Query: 202  THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
              G +PY CK C KTF++   +  H+R+ H   KPY+C  C K   +   L  H  + H 
Sbjct: 1610 HTGEKPYDCKQCGKTFSQSSTLSVHQRI-HTGEKPYKCKQCGKTFTNNSNLAVH-QRTHT 1667

Query: 262  AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
             ++ +ECK C  T     +   H  +H+  KP+ C  CGK F     +  H R HT  +P
Sbjct: 1668 GEKPYECKYCEMTFSESSSLAVHQRIHTGEKPYDCKQCGKTFSQSSSLAAHQRIHTGEKP 1727

Query: 321  TFECDVCHQIFPT-DFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
             +EC  C + F        H  +H  EK + C  CG  F + + L VH R+H
Sbjct: 1728 -YECKQCGKAFSQGSALAVHQRIHTGEKPYECKQCGKTFGHSSTLSVHQRRH 1778

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334325100|ref|XP_003340603.1| PREDICTED: zinc finger protein 160-like [Monodelphis domestica]

 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 170/368 (46%), Gaps = 29/368 (7%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           EC +CGK   R++ L  H R  HT   P       +  G   + +  L+   +      P
Sbjct: 337 ECNLCGKAFIRRASLTVHQR-IHTGEKPH----ECNQCGKAFRCRKRLVAHQRIHTGGKP 391

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH-------- 133
            EC+ CGK  + +  LT H   +H+G K Y C QC + F    +L  H   H        
Sbjct: 392 YECNQCGKAFTHRSTLTGH-QRIHTGEKPYECNQCGKAFRCRKRLVAHQRIHTGGKPYEC 450

Query: 134 ------MQKDTSISI--DVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQC 185
                  +K  S+++   + S  K ++C+QC    + +  L  H +R HT +    C  C
Sbjct: 451 NQCGKTFEKRASLTVHQRIHSGEKPYECNQCGRTFEKRAYLTLH-ERIHTGQKPFECNLC 509

Query: 186 GFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKI 245
           G          EHQ +  G +PY C  C KTFT+R ++  H+R+ H   K YEC  C K 
Sbjct: 510 GKAFIWRNSFTEHQRIHTGGKPYECNQCGKTFTQRSSLTVHQRI-HTGEKSYECNQCGKA 568

Query: 246 LVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKL 304
            + R +L  H  ++H  ++ +EC  C KT         H  +H+  KPF CN CGK F+ 
Sbjct: 569 FIQRTKLTVH-QRIHTGEKSYECNQCGKTFAKRAALTVHQRIHTGEKPFECNQCGKAFRG 627

Query: 305 KYYVNLHMRTHTRIRPTFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAG 363
           +  + LH R HT  +P F+C+ C + F   +  T H  +H  EK   C  CG  F + +G
Sbjct: 628 RDGLKLHQRIHTGQKP-FDCNQCGKAFSQKYGLTVHQRIHTGEKPFECNQCGKAFTHKSG 686

Query: 364 LKVHMRKH 371
           L VH R H
Sbjct: 687 LTVHQRIH 694

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334327357|ref|XP_003340882.1| PREDICTED: zinc finger protein 420-like [Monodelphis domestica]

 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 155/350 (44%), Gaps = 23/350 (6%)

Query: 24  CPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPV 83
           C  CGK  S++S LV H R  HT   P          G      + L    +      P 
Sbjct: 411 CKQCGKAFSQRSTLVQHQR-MHTGEKPY----ECKQCGKAFSCSSALAAHQRIHTGEKPY 465

Query: 84  ECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISID 143
           EC  CGK  S +     H       K Y C+QC + F N   L +H  TH          
Sbjct: 466 ECQQCGKAFSHRSYFATHQRTHTGEKPYDCKQCGKAFRNSSHLGRHQRTH---------- 515

Query: 144 VISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTH 203
             S  K ++C QC  A  D ++L TH +R H+ E    C QCG  C ++  L +HQ    
Sbjct: 516 --SGEKPYECKQCGKAFSDSFHLATH-QRMHSGEKPYECKQCGKACQSSSHLAKHQRTHT 572

Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQ 263
           G +PY CK C K F+   ++ TH+R KH   KPYEC  C K    R  L +H  ++H  +
Sbjct: 573 GEKPYECKQCGKAFSDSSHLATHQR-KHTGEKPYECKQCGKAFSQRSTLVQH-QRIHTGE 630

Query: 264 R-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTF 322
           + +ECK C K      +   H  +H+  KPF C  CGK F  + Y   H RTHT  +P +
Sbjct: 631 KPYECKQCGKAFNHSSSILHHQRIHTGVKPFECKQCGKAFSHRSYFATHQRTHTGEKP-Y 689

Query: 323 ECDVCHQIF-PTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           +C  C + F       +H  +H  EK + C  CG  F   +    H R H
Sbjct: 690 DCKQCGKAFRQRSILLQHQRIHTGEKPYECKQCGKAFRQRSHHARHQRIH 739

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326678763|ref|XP_003201162.1| PREDICTED: zinc finger protein 420-like [Danio rerio]

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 159/355 (44%), Gaps = 32/355 (9%)

Query: 24  CPVCGKVLSRKSKLVSHMRSFHTS----VTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKS 79
           C  CGK  S+ S L  H+R  HT       P  G   N +S         L    K    
Sbjct: 39  CTQCGKSFSQSSSLNLHVR-IHTGEKPFTCPHCGKSFNQSS--------HLNCHMKIHTG 89

Query: 80  RAPVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDT 138
             P  C  CGK  S+   L  H+  +H+G K + C QC + FT   +L QHM  H  +  
Sbjct: 90  EKPFTCPQCGKSFSQSSNLNCHMT-IHTGEKPFTCTQCGKSFTCSSRLHQHMRIHTGE-- 146

Query: 139 SISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEH 198
                     K F C QC  +     +L     R HT E    CTQCG     +  L EH
Sbjct: 147 ----------KPFSCTQCGKSFSQSSHLIKIHMRIHTGEKPFTCTQCGKSFSYSSHLNEH 196

Query: 199 QILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQ 258
            ++  G +P+ C  C K+ T +  +K H  M H   KP+ C  C K       LN H+ +
Sbjct: 197 MMIHTGKKPFTCTQCGKSLTTKRKLKIHT-MNHTGEKPFTCTQCGKSFSRSSSLNNHM-K 254

Query: 259 VHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR 317
           +H  ++ F C  C K+        KHM +H+  KPF C +CGK F    ++N HMR HT 
Sbjct: 255 IHTGEKPFACTQCGKSFSHSSHLNKHMRIHTGEKPFTCTLCGKSFSQSSHLNEHMRIHTG 314

Query: 318 IRPTFECDVCHQIFP-TDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           +RP F C  C + F  + + TKHM +H   +   C +CG  F   + L +HM+ H
Sbjct: 315 VRP-FTCTQCGKSFSQSSYITKHMRIHTGVRPFTCTLCGKSFSQSSTLNLHMKIH 368

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334349402|ref|XP_003342200.1| PREDICTED: zinc finger protein 160-like [Monodelphis domestica]

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 169/367 (46%), Gaps = 27/367 (7%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           EC +CGK  + KS L  H R  HT   P       +  G     +  L +  +      P
Sbjct: 404 ECNLCGKAFTEKSGLTVHQR-IHTGKKPY----ECNQCGKAFIWRNKLTIHQRMHTGEKP 458

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHM-------- 134
            EC+ CGK   ++ KLT H       K Y C QC + F+    L  H   H         
Sbjct: 459 FECNQCGKGFIQRTKLTVHQRIQTGEKSYECNQCGKAFSQKSGLTVHQRIHTGEKPFECN 518

Query: 135 --------QKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCG 186
                   +   ++   + +  K F+C+QC  A   K +L  H ++ HT+E S  C  CG
Sbjct: 519 QCGKSFTHKSGLTVHQRIHTGEKPFECNQCGKAFIQKVSLTVH-QKIHTREKSYKCNHCG 577

Query: 187 FGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKIL 246
                 + L +HQ +  G +P+ C  C K F+++ ++  H+R+ H   KPYEC  C K  
Sbjct: 578 KAFRCRKSLVKHQRIHTGEKPFECNLCGKGFSQKSHLTVHQRI-HTGEKPYECNQCGKAF 636

Query: 247 VSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLK 305
               RL  H  ++H  ++ +EC LC K    +     H ++++  KP+ CN CGK F  +
Sbjct: 637 TYESRLAVH-QRIHTGEKPYECNLCGKAFSQKSGLTVHQSINTGEKPYECNQCGKAFTYE 695

Query: 306 YYVNLHMRTHTRIRPTFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGL 364
            ++N+H R HT  +P FEC++C + F    + T H  +H  EK + C +CG  F     L
Sbjct: 696 SHLNVHQRIHTGEKP-FECNLCGKTFIQRGKLTVHQRIHTGEKPYECNLCGKAFTQKYSL 754

Query: 365 KVHMRKH 371
            VH R H
Sbjct: 755 TVHQRSH 761

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334313269|ref|XP_003339868.1| PREDICTED: zinc finger protein 420-like [Monodelphis domestica]

 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 168/376 (44%), Gaps = 31/376 (8%)

Query: 1   MVVISLSDTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTS 60
           M   SLS  ++I      Y   EC  CGK  S++S L  H R  HT   P          
Sbjct: 139 MQKASLSGHQSIHIGERPY---ECKQCGKTFSQRSHLAVHQR-VHTGEKPYECKQCGKAF 194

Query: 61  GHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRK 119
            H       L++  +      P EC +CGK  S    L  H   +H+G K Y C QC + 
Sbjct: 195 SH----SCSLIVHQRVHTGEKPYECKWCGKTFSWSSSLAAH-QRIHTGEKPYECNQCGKT 249

Query: 120 FTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYS 179
           FTN  KL  H   H  +            K ++C QC  +   +++L  H +R HT E  
Sbjct: 250 FTNNSKLVVHQRVHTGE------------KPYECKQCGKSFSQRFHLAIH-QRVHTGEKP 296

Query: 180 VLCTQCGFGCYTNR--ELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPY 237
             C QCG   ++ R   L  HQ +  G +PY CK C KTFT   N+  H+R+ H   KPY
Sbjct: 297 YECKQCG-KTFSQRFPSLAAHQRVHTGEKPYECKQCGKTFTNNSNLAAHQRV-HSGEKPY 354

Query: 238 ECYICNKILVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCN 296
           EC  C K       L  H  +VH  ++ +ECK C KT  S      H  +H+  KP+ C 
Sbjct: 355 ECKECGKTFTYNSSLAAH-QRVHTGEKPYECKQCGKTFSSRSYLAVHHRVHTGEKPYECK 413

Query: 297 ICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTK-HMLVHDVEKSHLCFVCG 355
            CGK F     +  H R HT  +P +EC  C + F  + +   H  VH  EK + C  CG
Sbjct: 414 QCGKSFTNNSSLAAHQRIHTGEKP-YECRQCGKTFTYNSKLAVHHRVHTGEKPYECKQCG 472

Query: 356 AGFVNDAGLKVHMRKH 371
             F  ++ L VH R H
Sbjct: 473 KTFTYNSSLAVHQRIH 488

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
ZFIN|ZDB-GENE-110913-159	733	si:ch211-197f20.2 "si:ch211-19	0.911	0.462	0.316	7.3e-48
UNIPROTKB|J9NRJ4	688	ZNF420 "Uncharacterized protei	0.879	0.475	0.326	7.7e-48
UNIPROTKB|J9NW95	685	ZNF420 "Uncharacterized protei	0.879	0.477	0.326	7.7e-48
UNIPROTKB|A2VDQ7	687	ZNF420 "Zinc finger protein 42	0.879	0.475	0.323	6.9e-47
UNIPROTKB|F1MML9	687	ZNF420 "Zinc finger protein 42	0.879	0.475	0.323	6.9e-47
ZFIN|ZDB-GENE-071004-26	471	zgc:171727 "zgc:171727" [Danio	0.930	0.734	0.316	6.9e-47
ZFIN|ZDB-GENE-110914-160	1003	si:dkey-240n22.7 "si:dkey-240n	0.908	0.336	0.330	9.6e-47
ZFIN|ZDB-GENE-110913-145	656	si:ch211-209n20.58 "si:ch211-2	0.908	0.515	0.316	1.4e-46
UNIPROTKB|Q8TAQ5	688	ZNF420 "Zinc finger protein 42	0.879	0.475	0.321	2.3e-46
UNIPROTKB|P17035	718	ZNF28 "Zinc finger protein 28"	0.911	0.472	0.312	4.1e-46

ZFIN|ZDB-GENE-110913-159 si:ch211-197f20.2 "si:ch211-197f20.2" [Danio rerio (taxid:7955)]

 Score = 502 (181.8 bits), Expect = 7.3e-48, P = 7.3e-48
 Identities = 117/370 (31%), Positives = 175/370 (47%)

Query:    22 VECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRA 81
             + C  CGK   + S L  HMR  HT   P        +   +S +   +M+ H   K   
Sbjct:   373 ITCTQCGKSFHQSSSLYKHMR-IHTGEKPFTCTQCGKSFSRLSHLNRHMMI-HTGEK--- 427

Query:    82 PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH------- 133
             P  C+ CGK  SR   L RH+  +H+G K + C QC + F+N   L +HM  H       
Sbjct:   428 PFTCTQCGKSFSRLSHLIRHMM-IHTGEKPFTCSQCRKSFSNLSSLYRHMRIHTGEKPFT 486

Query:   134 -------MQKDTSISIDVI--SEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQ 184
                     ++ +++++ ++  +E K FKC QC  +     +L  HI   HT E    CTQ
Sbjct:   487 CTQCGKSFRQSSNLNLHMMIHTEEKPFKCTQCGKSFSQSSHLNQHIMI-HTGEKPFKCTQ 545

Query:   185 CGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNK 244
             CG     +  L +H ++  G +P+ C  C K+F K  ++  H RM H   KP+ C  C  
Sbjct:   546 CGKSFIQSSSLNQHMMIHTGEKPFTCPKCGKSFRKSSSLNEH-RMIHTGEKPFTCPKCEM 604

Query:   245 ILVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFK 303
                    LN+H+ ++H  ++ F C  C K+     + K HM +H+  KPF C  CGK F 
Sbjct:   605 SFSQSSSLNKHM-RIHTGEKPFTCTQCGKSFNQTSSLKDHMRIHTGEKPFTCPKCGKSFN 663

Query:   304 LKYYVNLHMRTHTRIRPTFECDVCHQIF--PTDFRTKHMLVHDVEKSHLCFVCGAGFVND 361
                ++N HMR HT  +P F C  C + F  P+    KHM +H   ++++C  C   F+  
Sbjct:   664 QSSHLNHHMRIHTGEKP-FTCTQCGKSFSRPSSLN-KHMKIHTGVRAYMCLKCKKTFITA 721

Query:   362 AGLKVHMRKH 371
               LK H R H
Sbjct:   722 EDLKRHQRIH 731

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|J9NRJ4 ZNF420 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 115/352 (32%), Positives = 163/352 (46%)

Query:    23 ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
             EC  CGK  SR S+L+ H R  HT   P A  +        SQ    L+L H+      P
Sbjct:   168 ECKQCGKAFSRDSQLILHQR-LHTGEKPYACKECGKAFTQSSQ----LILHHRIHTGEKP 222

Query:    83 VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
              +C  CGK   R  +LTRH   VH+G K Y C++C + FT   +L  H   H  +     
Sbjct:   223 YKCEECGKAFIRSSQLTRH-QKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTGE----- 276

Query:   142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                    K ++C +C         L  H KR HT E    C +CG       +L +HQ +
Sbjct:   277 -------KLYECKECRKVFTQLSQLILH-KRIHTGEKPYECKECGKAFICGSQLSQHQKI 328

Query:   202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
              +G +PY CK C K F +   +  H+R+ H   KPY+C  C K  +   +L +H  ++H 
Sbjct:   329 HNGEKPYECKECGKAFIRGSLLMQHQRI-HTGEKPYKCEECGKAFIRGSQLTQH-QRIHT 386

Query:   262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
              ++ +ECK C KT        +H  +H+  KP+ C  CGK F     +  H R HT  +P
Sbjct:   387 NEKPYECKECGKTFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKP 446

Query:   321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
              +EC  C + F      T+H  +H  EK + C  CG  F+  + L  H R H
Sbjct:   447 -YECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIH 497

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9NW95 ZNF420 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 115/352 (32%), Positives = 163/352 (46%)

Query:    23 ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
             EC  CGK  SR S+L+ H R  HT   P A  +        SQ    L+L H+      P
Sbjct:   165 ECKQCGKAFSRDSQLILHQR-LHTGEKPYACKECGKAFTQSSQ----LILHHRIHTGEKP 219

Query:    83 VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
              +C  CGK   R  +LTRH   VH+G K Y C++C + FT   +L  H   H  +     
Sbjct:   220 YKCEECGKAFIRSSQLTRH-QKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTGE----- 273

Query:   142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                    K ++C +C         L  H KR HT E    C +CG       +L +HQ +
Sbjct:   274 -------KLYECKECRKVFTQLSQLILH-KRIHTGEKPYECKECGKAFICGSQLSQHQKI 325

Query:   202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
              +G +PY CK C K F +   +  H+R+ H   KPY+C  C K  +   +L +H  ++H 
Sbjct:   326 HNGEKPYECKECGKAFIRGSLLMQHQRI-HTGEKPYKCEECGKAFIRGSQLTQH-QRIHT 383

Query:   262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
              ++ +ECK C KT        +H  +H+  KP+ C  CGK F     +  H R HT  +P
Sbjct:   384 NEKPYECKECGKTFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKP 443

Query:   321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
              +EC  C + F      T+H  +H  EK + C  CG  F+  + L  H R H
Sbjct:   444 -YECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIH 494

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|A2VDQ7 ZNF420 "Zinc finger protein 420" [Bos taurus (taxid:9913)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 114/352 (32%), Positives = 162/352 (46%)

Query:    23 ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
             EC  CGK  SR S+L  H R  HT   P A  +        SQ    L+L H+      P
Sbjct:   167 ECKQCGKAFSRDSQLSLHQR-LHTGEKPYACKECGKAFTQSSQ----LILHHRIHTGEKP 221

Query:    83 VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
              +C  CGK   R  +LTRH   VH+G K Y C++C + FT   +L  H   H  +     
Sbjct:   222 YKCEECGKAFIRSSQLTRH-QKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTGE----- 275

Query:   142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                    K ++C +C         L  H KR HT E    C +CG       +L +HQ +
Sbjct:   276 -------KLYECKECRKVFTQLSQLILH-KRIHTGEKPYECKECGKAFICGSQLSQHQKI 327

Query:   202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
              +G +PY C+ C K F +   +  H+R+ H   KPY+C  C K  +   +L +H  ++H 
Sbjct:   328 HNGEKPYECQECGKAFIRGSLLMQHQRI-HTGEKPYKCEECGKAFIRGSQLTQH-QRIHT 385

Query:   262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
              ++ +ECK C KT        +H  +H+  KP+ C  CGK F     +  H R HT  +P
Sbjct:   386 NEKPYECKECGKTFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKP 445

Query:   321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
              +EC  C + F      T+H  +H  EK + C  CG  F+  + L  H R H
Sbjct:   446 -YECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIH 496

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MML9 ZNF420 "Zinc finger protein 420" [Bos taurus (taxid:9913)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 114/352 (32%), Positives = 162/352 (46%)

Query:    23 ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
             EC  CGK  SR S+L  H R  HT   P A  +        SQ    L+L H+      P
Sbjct:   167 ECKQCGKAFSRDSQLSLHQR-LHTGEKPYACKECGKAFTQSSQ----LILHHRIHTGEKP 221

Query:    83 VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
              +C  CGK   R  +LTRH   VH+G K Y C++C + FT   +L  H   H  +     
Sbjct:   222 YKCEECGKAFIRSSQLTRH-QKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTGE----- 275

Query:   142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                    K ++C +C         L  H KR HT E    C +CG       +L +HQ +
Sbjct:   276 -------KLYECKECRKVFTQLSQLILH-KRIHTGEKPYECKECGKAFICGSQLSQHQKI 327

Query:   202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
              +G +PY C+ C K F +   +  H+R+ H   KPY+C  C K  +   +L +H  ++H 
Sbjct:   328 HNGEKPYECQECGKAFIRGSLLMQHQRI-HTGEKPYKCEECGKAFIRGSQLTQH-QRIHT 385

Query:   262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
              ++ +ECK C KT        +H  +H+  KP+ C  CGK F     +  H R HT  +P
Sbjct:   386 NEKPYECKECGKTFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKP 445

Query:   321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
              +EC  C + F      T+H  +H  EK + C  CG  F+  + L  H R H
Sbjct:   446 -YECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIH 496

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-071004-26 zgc:171727 "zgc:171727" [Danio rerio (taxid:7955)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 121/382 (31%), Positives = 179/382 (46%)

Query:    11 AIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTS---VTPEAGGDNNDTSGHMSQIQ 67
             A + K S Y    CP CGK   +KS L +HMR  HT    +T +  G +     +  + +
Sbjct:    71 AEKTKSSSYFP--CPECGKHFCQKSSLEAHMR-IHTGESLITCDQCGKSFSRKSYFDKHR 127

Query:    68 TMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKL 126
                   H K K   P  C+ CGK  S+K+ LT H+  +H+G K +PC+ C +KF     L
Sbjct:   128 KT----HTKEK---PYWCTECGKRFSQKNNLTVHMR-IHTGEKPFPCQYCGKKFRQMQNL 179

Query:   127 KQHMLTHMQK---------DTSISIDVISEIKKFK-------CDQCDYATKDKYNLGTHI 170
             K H+  H  +               +++ E  K         CDQC  +   K +   H+
Sbjct:   180 KAHIPVHTGERPYNCQPCGKRFTKAEILKEHTKIHTGKNLLTCDQCGKSFTRKASFDIHM 239

Query:   171 KRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMK 230
              R HT +  + C QCG         E H  +    +PY C  C K F+++ N++ H R+ 
Sbjct:   240 -RIHTGKNLLTCDQCGKSFTRKAGFEIHMRIHTKEKPYWCTECGKRFSQKHNLEVHMRI- 297

Query:   231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDA 290
             H   KP+ C  C K       L  H+  VH  +++ C+ C ++    +  + HM++H+  
Sbjct:   298 HTGEKPFPCQYCGKRFRQLQNLKAHIT-VHKQKQYACQQCGRSFAQAENLQVHMSVHTGE 356

Query:   291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTK-HMLVHDVEKSH 349
             KP+ C  CGK+FK KY +  HM+ HT  +P F CD C + F   F  K HM +H  +K  
Sbjct:   357 KPYSCTQCGKNFKCKYNLTCHMKIHTGEKP-FTCDECGKGFRRKFHLKQHMWLHRTDKLF 415

Query:   350 LCFVCGAGFVNDAGLKVHMRKH 371
              C  CG  FV +  L  HMR H
Sbjct:   416 TCEKCGKSFVREDYLSEHMRVH 437

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110914-160 si:dkey-240n22.7 "si:dkey-240n22.7" [Danio rerio (taxid:7955)]

 Score = 499 (180.7 bits), Expect = 9.6e-47, P = 9.6e-47
 Identities = 122/369 (33%), Positives = 174/369 (47%)

Query:    23 ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
             +C  CGK    K  L  HMR  HT   P        +       Q  + + H K K   P
Sbjct:   260 QCQECGKSFIDKQHLKVHMR-IHTGDKPYQCQQCGKSFNRKQNFQVHMRI-HTKEK---P 314

Query:    83 VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHM------- 134
               C  CG+  +RK  L  H+  VH+G K Y C+QC + F+    L  HM TH        
Sbjct:   315 FSCHQCGRSFNRKQNLKVHMR-VHTGDKPYQCQQCGKSFSQKATLDAHMRTHSGLNAFTC 373

Query:   135 --------QKDT-SISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQC 185
                     QK    + + + S  K +KC  C  +   K +L  H +R HTKE    C QC
Sbjct:   374 QQCGKSFGQKQKLQLHMRIHSREKPYKCQHCGESFSQKAHLTGH-ERVHTKEKPYTCLQC 432

Query:   186 GFGCYTNRE-LEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNK 244
             G  C++ ++ L+ H  +  G +PY C++C K+F +R ++  H R+ H   KP+ C  C K
Sbjct:   433 G-KCFSLKQNLKLHVRIHSGEKPYQCQHCGKSFNQRSHLTGHTRI-HTGEKPFSCQQCGK 490

Query:   245 ILVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFK 303
                 +  L  H+ +VH  +R + C+ C K    ++  K HM +H+  KP+VC  CGK F 
Sbjct:   491 SFAQQTNLKVHM-RVHTRERPYTCQDCGKRFFHKQNLKVHMRVHTGEKPYVCQQCGKSFS 549

Query:   304 LKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTK-HMLVHDVEKSHLCFVCGAGFVNDA 362
              K  ++ HM TH+ + P F C  C + F      K HM VH  EK + C  CG  F    
Sbjct:   550 QKTNLDAHMGTHSVVNP-FICQQCGKSFGHKQNLKIHMRVHTGEKPYSCGQCGKSFRQYP 608

Query:   363 GLKVHMRKH 371
              LK+H+R H
Sbjct:   609 SLKIHVRIH 617

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-145 si:ch211-209n20.58 "si:ch211-209n20.58" [Danio rerio (taxid:7955)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 116/367 (31%), Positives = 163/367 (44%)

Query:    24 CPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPV 83
             C  CGK  S+ S L  HMR  HT   P        +  H S +   +M+ H   K   P 
Sbjct:   236 CTQCGKSFSKSSSLYRHMR-IHTGEKPFTCTQCGKSFSHSSSLNQHMMI-HTGEK---PF 290

Query:    84 ECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH--------- 133
              C  CGK       L  H+  +H+G K + C QC + F+    LKQHM  H         
Sbjct:   291 TCPQCGKSFIHSSNLNLHMR-IHTGEKPFTCSQCGKSFSTSSHLKQHMKIHTGEKPFTCT 349

Query:   134 -----MQKDTSI--SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCG 186
                    K +S+   + + +  K F C  C  +     +L  H+ R HT E    CTQCG
Sbjct:   350 QCGKSFSKSSSLYRHMKIHTGEKPFICTLCGKSFSQSSSLNLHM-RIHTGEKPFTCTQCG 408

Query:   187 FGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKIL 246
                  +  L  H  +  G +P+ C  C K+F +  ++  H R+ H   KP+ C +C K  
Sbjct:   409 KSFNQSSNLYLHMRIHTGEKPFTCTQCGKSFRQSSSLNLHMRI-HTGEKPFTCTLCGKNF 467

Query:   247 VSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLK 305
             +    LN+H+  +H  ++ F C  C K+     +  +HM  H+  KPF C  CGK F   
Sbjct:   468 IHSSHLNQHM-MIHTGEKPFTCTQCGKSFRISSSLCRHMMTHTIEKPFTCTQCGKSFSQS 526

Query:   306 YYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTK-HMLVHDVEKSHLCFVCGAGFVNDAGL 364
              Y+N HMR HTR +P F C  C + F        HM++H  EK   C  CG  F+  + L
Sbjct:   527 SYLNKHMRIHTREKP-FTCTQCGKSFSQSSHLNLHMMIHTGEKPFTCTQCGKSFMISSSL 585

Query:   365 KVHMRKH 371
               HM  H
Sbjct:   586 CRHMMTH 592

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q8TAQ5 ZNF420 "Zinc finger protein 420" [Homo sapiens (taxid:9606)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 113/352 (32%), Positives = 161/352 (45%)

Query:    23 ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
             EC  CGK  SR S+L  H R  HT   P A  +        SQ    L+L H+      P
Sbjct:   168 ECKQCGKAFSRDSQLSLHQR-LHTGEKPYACKECGKAFTQSSQ----LILHHRIHTGEKP 222

Query:    83 VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
              +C  CGK   R  +LTRH   VH+G K Y C++C + FT   +L  H   H  +     
Sbjct:   223 YKCEECGKAFIRSSQLTRH-QKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTGE----- 276

Query:   142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                    K ++C +C         L  H KR HT E    C +CG       +L +HQ +
Sbjct:   277 -------KLYECKECRKVFTQLSQLILH-KRIHTGEKPYECKECGKAFICGSQLSQHQKI 328

Query:   202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
              +G +PY CK C + F +   +  H+R+ H   KPY+C  C K  +   +L +H  ++H 
Sbjct:   329 HNGEKPYECKECGRAFIRGSLLMQHQRI-HTGEKPYKCEECGKAFIRGSQLTQH-QRIHT 386

Query:   262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
              ++ +ECK C K         +H  +H+  KP+ C  CGK F     +  H R HT  +P
Sbjct:   387 NEKPYECKECGKMFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKP 446

Query:   321 TFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
              +EC  C + F      T+H  +H  EK + C  CG  F+  + L  H R H
Sbjct:   447 -YECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQLTQHQRIH 497

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|P17035 ZNF28 "Zinc finger protein 28" [Homo sapiens (taxid:9606)]

 Score = 486 (176.1 bits), Expect = 4.1e-46, P = 4.1e-46
 Identities = 115/368 (31%), Positives = 171/368 (46%)

Query:    23 ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
             +C V GKV ++K  L  H RS H    P    +     GH     T L L      +  P
Sbjct:   244 KCDVYGKVFNQKRYLACHRRS-HIDEKPYKCNECGKIFGH----NTSLFLHKALHTADKP 298

Query:    83 VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFT-NGYKLKQHMLTHM-QKDTSI 140
              EC  C KV SRK  L  H      GK Y C+ CD+ FT N Y L +H + H  +K    
Sbjct:   299 YECEECDKVFSRKSHLETHKIIYTGGKPYKCKVCDKAFTCNSY-LAKHTIIHTGEKPYKC 357

Query:   141 S-----IDVISEI----------KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQC 185
             +      + +S +          K ++C++C+     K +L  H KR HT E    C  C
Sbjct:   358 NECGKVFNRLSTLARHRRLHTGEKPYECEECEKVFSRKSHLERH-KRIHTGEKPYKCKVC 416

Query:   186 GFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKI 245
                   N  L +H I+  G +PY C  C K F ++  +  H R+ H   KPY+C  C+K+
Sbjct:   417 DKAFAYNSYLAKHSIIHTGEKPYKCNECGKVFNQQSTLARHHRL-HTAEKPYKCEECDKV 475

Query:   246 LVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKL 304
                +  L  H  ++H  ++ ++CK+C K   S+    +H  +H+  KP++CN CGK F  
Sbjct:   476 FRCKSHLERH-RRIHTGEKPYKCKVCDKAFRSDSCLTEHQRVHTGEKPYMCNECGKVFST 534

Query:   305 KYYVNLHMRTHTRIRPTFECDVCHQIFPT-DFRTKHMLVHDVEKSHLCFVCGAGFVNDAG 363
             K  +  H + HT  +P ++C+ C ++F       +H  +H  EK + C VC   F  D+ 
Sbjct:   535 KANLACHHKLHTAEKP-YKCEECEKVFSRKSHMERHRRIHTGEKPYKCKVCDKAFRRDSH 593

Query:   364 LKVHMRKH 371
             L  H R H
Sbjct:   594 LAQHQRVH 601

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	372
KOG1074|consensus	958		99.95
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.94
KOG2462|consensus	279		99.94
KOG3608|consensus	467		99.94
KOG3608|consensus	467		99.93
KOG3623|consensus	1007		99.89
KOG3623|consensus	1007		99.82
KOG3576|consensus	267		99.72
KOG3576|consensus	267		99.62
PLN03086	567	PRLI-interacting factor K; Provisional	99.34
PLN03086	567	PRLI-interacting factor K; Provisional	99.34
PHA00733	128	hypothetical protein	99.13
KOG3993|consensus	500		99.0
PHA00733	128	hypothetical protein	98.97
PHA02768	55	hypothetical protein; Provisional	98.89
KOG3993|consensus	500		98.84
PHA02768	55	hypothetical protein; Provisional	98.77
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.68
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.53
PHA00616	44	hypothetical protein	98.38
PHA00616	44	hypothetical protein	98.36
PHA00732	79	hypothetical protein	98.28
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.23
PHA00732	79	hypothetical protein	98.21
KOG1146|consensus	1406		98.1
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.04
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.02
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.02
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.97
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.81
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.76
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.72
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.64
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.58
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.21
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.14
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.09
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.97
smart00355	26	ZnF_C2H2 zinc finger.	96.97
KOG2231|consensus	669		96.96
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.95
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.94
smart00355	26	ZnF_C2H2 zinc finger.	96.86
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.82
KOG2482|consensus	423		96.77
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.71
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.64
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.64
KOG2785|consensus	390		96.31
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.28
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.22
PRK04860	160	hypothetical protein; Provisional	96.11
KOG2893|consensus	341		96.11
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.78
KOG1146|consensus	1406		95.75
KOG2482|consensus	423		95.72
KOG2785|consensus	390		95.62
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.48
PRK04860	160	hypothetical protein; Provisional	95.08
KOG2231|consensus	669		94.9
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.67
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.34
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.05
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	93.98
COG5048	467	FOG: Zn-finger [General function prediction only]	93.37
COG5048	467	FOG: Zn-finger [General function prediction only]	92.33
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.17
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.75
COG4049	65	Uncharacterized protein containing archaeal-type C	90.89
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	90.67
KOG4173|consensus	253		89.7
KOG2893|consensus	341		89.25
KOG4173|consensus	253		89.12
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	88.65
COG4049	65	Uncharacterized protein containing archaeal-type C	88.21
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	86.95
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	86.64
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	86.42
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	85.31
PHA00626	59	hypothetical protein	84.94
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	84.5
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	84.1
PF02176	60	zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A	83.89
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	83.37
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	83.19
KOG2186|consensus	276		82.76
COG1592	166	Rubrerythrin [Energy production and conversion]	82.58
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.38
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	82.33
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	82.31
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	81.74
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	81.44
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	81.06
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	80.86

>KOG1074|consensus

Probab=99.95  E-value=1e-29  Score=226.65  Aligned_cols=164  Identities=24%  Similarity=0.561  Sum_probs=131.3

Q ss_pred             cccccchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhhhhcc----Cccccc---ccccccCChHHH
Q psy16828        208 YHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLA----QRFECK---LCHKTIVSEKTF  280 (372)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~---~C~~~f~~~~~l  280 (372)
                      ..|-+|.+...-++.|+.|++. |+||+||+|.+|++.|.++.+|+.|+..|-..    -++.|+   +|-+.|...-.|
T Consensus       606 NqCiiC~rVlSC~saLqmHyrt-HtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRT-HTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             cceeeeeecccchhhhhhhhhc-ccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            6788888888888888888888 88888888888888888888888888776543    347788   888888888888


Q ss_pred             HHHHhhhcCC-C------------CcccCcccccccchhhHHHHHhhhcCCCC---------------------------
Q psy16828        281 KKHMALHSDA-K------------PFVCNICGKDFKLKYYVNLHMRTHTRIRP---------------------------  320 (372)
Q Consensus       281 ~~H~~~h~~~-~------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~---------------------------  320 (372)
                      ..|++.|.+. .            .-+|..|.+.|.....+..++..+.+...                           
T Consensus       685 pQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~  764 (958)
T KOG1074|consen  685 PQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCG  764 (958)
T ss_pred             cceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccccc
Confidence            8888887632 1            13578888888777777777655511100                           


Q ss_pred             --------------------------------------------------------------------------------
Q psy16828        321 --------------------------------------------------------------------------------  320 (372)
Q Consensus       321 --------------------------------------------------------------------------------  320 (372)
                                                                                                      
T Consensus       765 ~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~  844 (958)
T KOG1074|consen  765 RELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATK  844 (958)
T ss_pred             cccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------CccCCCCCCcCCCC-ccccccccccCCCceeCcccCCcccChhhHH
Q psy16828        321 ----------------------------------TFECDVCHQIFPTD-FRTKHMLVHDVEKSHLCFVCGAGFVNDAGLK  365 (372)
Q Consensus       321 ----------------------------------~~~C~~C~~~f~~~-~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~  365 (372)
                                                        ...|.+|++.|... .|..|+|+|+|+|||.|.+|++.|..+.+|+
T Consensus       845 ~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLK  924 (958)
T KOG1074|consen  845 TNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLK  924 (958)
T ss_pred             cccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhh
Confidence                                              26799999999877 9999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy16828        366 VHMRKHQ  372 (372)
Q Consensus       366 ~H~~~h~  372 (372)
                      .||.+|.
T Consensus       925 vHMgtH~  931 (958)
T KOG1074|consen  925 VHMGTHM  931 (958)
T ss_pred             hhhcccc
Confidence            9999884

>KOG1074|consensus

Probab=99.95  E-value=5.3e-29  Score=222.06  Aligned_cols=109  Identities=23%  Similarity=0.444  Sum_probs=84.8

Q ss_pred             CcccCCCCccccCChhhHHHHHhhhcCCCceeecCCCCCcccChHHHHHHHHHhcCC----CCcccc---cchhhhcChh
Q psy16828        149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGA----EPYHCK---YCDKTFTKRM  221 (372)
Q Consensus       149 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~---~C~~~f~~~~  221 (372)
                      .+..|-+|-++...+++|+-|. +.|+++++|+|.+|++.|.++.+|+.|+..|...    ..+.|+   +|.+.|....
T Consensus       604 dPNqCiiC~rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             Cccceeeeeecccchhhhhhhh-hcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            3567888888888888888886 7888888888888888888888888888877644    347788   8888888888


Q ss_pred             hhHhhhhhhcc-CCCC------------cccccccccccccchHHhHHhhh
Q psy16828        222 NVKTHERMKHE-NHKP------------YECYICNKILVSRGRLNEHLNQV  259 (372)
Q Consensus       222 ~l~~H~~~~h~-~~~~------------~~C~~C~~~f~~~~~l~~H~~~~  259 (372)
                      .|..|+++ |. +..+            -.|+.|.+.|.....+..++..+
T Consensus       683 ~lpQhIri-H~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~  732 (958)
T KOG1074|consen  683 TLPQHIRI-HLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQ  732 (958)
T ss_pred             cccceEEe-ecCCCCCCCcccccccchhcccchhhhcccccccchhhhhcc
Confidence            88888888 44 2222            45888888887777776666544

>KOG2462|consensus

Probab=99.94  E-value=1.1e-27  Score=188.55  Aligned_cols=135  Identities=32%  Similarity=0.618  Sum_probs=107.5

Q ss_pred             CceeecCCCCCcccChHHHHHHHHHhcC---CCCcccccchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHH
Q psy16828        177 EYSVLCTQCGFGCYTNRELEEHQILTHG---AEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLN  253 (372)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~  253 (372)
                      ...|+|+.|++.+.+..+|.+|...|-.   .+.+.|++|++.|.+...|..|+++ |.  .+..|.+||+.|..+..|+
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirT-H~--l~c~C~iCGKaFSRPWLLQ  204 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRT-HT--LPCECGICGKAFSRPWLLQ  204 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhc-cC--CCcccccccccccchHHhh
Confidence            3456777777777777777777665543   4567888888888888888888887 54  5678888888888888888


Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhh
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRT  314 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  314 (372)
                      .|+++|+|++||.|+.|+++|.++++|+.|+++|.+.++|+|..|+++|...+.|.+|...
T Consensus       205 GHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  205 GHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            8888888888888888888888888888888888888888888888888888888888654

>KOG2462|consensus

Probab=99.94  E-value=5.3e-28  Score=190.30  Aligned_cols=133  Identities=28%  Similarity=0.631  Sum_probs=116.6

Q ss_pred             CCCcccccchhhhcChhhhHhhhhhhcc--CCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHH
Q psy16828        205 AEPYHCKYCDKTFTKRMNVKTHERMKHE--NHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKK  282 (372)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~  282 (372)
                      ...|+|+.|++.+.+.++|.+|.+.|..  ..+.+.|.+|++.+.+...|+.|+++|.  -+.+|.+||+.|...+-|+.
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            3459999999999999999999998433  2466889999999999999999999887  67899999999999999999


Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-cccccc
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTKHM  340 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~h~  340 (372)
                      |+|+|+||+||.|+.|++.|.+++.|+.|+.+|.+.++ |.|+.|++.|... .|++|.
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~-~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK-HQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc-ccCcchhhHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999887 8888877777665 555554

>KOG3608|consensus

Probab=99.94  E-value=4.7e-26  Score=183.96  Aligned_cols=274  Identities=23%  Similarity=0.445  Sum_probs=217.3

Q ss_pred             Ceeccc--ccccccC-hhHHHHHHHhhccC----------------------------------ceeecc--cccccccC
Q psy16828         82 PVECSY--CGKVLSR-KDKLTRHIAAVHSG----------------------------------KEYPCE--QCDRKFTN  122 (372)
Q Consensus        82 ~~~C~~--C~~~~~~-~~~l~~H~~~~h~~----------------------------------~~~~C~--~C~~~f~~  122 (372)
                      .++|.+  |++...+ ...|.+|...|--.                                  ..|.|.  .|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            466766  7777666 47888997544310                                  126675  59999999


Q ss_pred             chhHHHHHHhhcccCCCCccccccccCc-ccC--CCCccccCChhhHHHHHhhhcCCCceeecCCCCCcccChHHHHHHH
Q psy16828        123 GYKLKQHMLTHMQKDTSISIDVISEIKK-FKC--DQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQ  199 (372)
Q Consensus       123 ~~~l~~H~~~~~~~~~~~~~~~~~~~~~-~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  199 (372)
                      ..++.+|+..|.-.-.+....+..+.++ +.|  ..|...+.++..|+.|+ +.|.+++...|+.|+.-|.++..|..|.
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~-r~Hs~eKvvACp~Cg~~F~~~tkl~DH~  227 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHI-RTHSNEKVVACPHCGELFRTKTKLFDHL  227 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHH-HhcCCCeEEecchHHHHhccccHHHHHH
Confidence            9999999988764422211122222222 344  56899999999999998 7899999999999999999999999998


Q ss_pred             HHhc--CCCCcccccchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhhhh-ccCcccccccccccCC
Q psy16828        200 ILTH--GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVH-LAQRFECKLCHKTIVS  276 (372)
Q Consensus       200 ~~~~--~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~-~~~~~~C~~C~~~f~~  276 (372)
                      +...  ...+|.|..|.+.|.+...|..|+.. |..  .|+|+.|.......++|..|++.-| ..+||+|..|++.|.+
T Consensus       228 rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~r-Hvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~  304 (467)
T KOG3608|consen  228 RRQTELNTNSFQCAQCFKRFATEKLLKSHVVR-HVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVR  304 (467)
T ss_pred             HhhhhhcCCchHHHHHHHHHhHHHHHHHHHHH-hhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhcc
Confidence            7665  35689999999999999999999988 654  4899999999999999999998644 5789999999999999


Q ss_pred             hHHHHHHHhhhcCCCCcccCc--ccccccchhhHHHHHhhhc-C-CCCCccCCCCCCcCCCC-cccccccc------ccC
Q psy16828        277 EKTFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHT-R-IRPTFECDVCHQIFPTD-FRTKHMLV------HDV  345 (372)
Q Consensus       277 ~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~-~~~~~~C~~C~~~f~~~-~l~~h~~~------h~~  345 (372)
                      .++|..|+.+|+ +-.|+|..  |.++|++...|++|.+.++ + ..++|+|-.|.+.|.+. .|.+|++.      ..|
T Consensus       305 esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsG  383 (467)
T KOG3608|consen  305 ESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSG  383 (467)
T ss_pred             HHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCCC
Confidence            999999999998 66799988  9999999999999998887 3 33469999999999877 77666643      345


Q ss_pred             CCceeCcccCCcccC
Q psy16828        346 EKSHLCFVCGAGFVN  360 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~  360 (372)
                      -+.|.=.+|.-+|.+
T Consensus       384 h~RFtYk~~edG~mR  398 (467)
T KOG3608|consen  384 HKRFTYKVDEDGFMR  398 (467)
T ss_pred             CCceeeeeccCceee
Confidence            555665666655544

>KOG3608|consensus

Probab=99.93  E-value=2.5e-25  Score=179.80  Aligned_cols=224  Identities=22%  Similarity=0.487  Sum_probs=196.7

Q ss_pred             CCeeccc--ccccccChhHHHHHHHhhccC-----------c--eeecc--cccccccCchhHHHHHHhhcccCCCCccc
Q psy16828         81 APVECSY--CGKVLSRKDKLTRHIAAVHSG-----------K--EYPCE--QCDRKFTNGYKLKQHMLTHMQKDTSISID  143 (372)
Q Consensus        81 ~~~~C~~--C~~~~~~~~~l~~H~~~~h~~-----------~--~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  143 (372)
                      ..|.|.+  |+..|.+..++..|+..|...           +  .+.|.  .|...|.++..|+.|++.|.++       
T Consensus       133 ~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~e-------  205 (467)
T KOG3608|consen  133 QNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNE-------  205 (467)
T ss_pred             hhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCC-------
Confidence            4577877  999999999999998555321           1  35665  4999999999999999999755       


Q ss_pred             cccccCcccCCCCccccCChhhHHHHHhhh-cCCCceeecCCCCCcccChHHHHHHHHHhcCCCCcccccchhhhcChhh
Q psy16828        144 VISEIKKFKCDQCDYATKDKYNLGTHIKRR-HTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMN  222 (372)
Q Consensus       144 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~  222 (372)
                           +...|+.|+..|.+...|-.|+++. -....+|+|..|.+-|.++..|..|+..|-  .-|+|+.|+......++
T Consensus       206 -----KvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ss  278 (467)
T KOG3608|consen  206 -----KVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASS  278 (467)
T ss_pred             -----eEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHH
Confidence                 6678999999999999999998543 445679999999999999999999999884  46999999999999999


Q ss_pred             hHhhhhhhccCCCCcccccccccccccchHHhHHhhhhccCcccccc--cccccCChHHHHHHHhhhc-CC--CCcccCc
Q psy16828        223 VKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKL--CHKTIVSEKTFKKHMALHS-DA--KPFVCNI  297 (372)
Q Consensus       223 l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~--~~~~C~~  297 (372)
                      |..|++..|...+|++|..|...|.+.+.|.+|+..|. +--|+|..  |.++|.+..+|..|++.++ |.  .+|.|-.
T Consensus       279 L~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~  357 (467)
T KOG3608|consen  279 LTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHC  357 (467)
T ss_pred             HHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeec
Confidence            99999999999999999999999999999999999655 77899999  9999999999999998765 44  4699999


Q ss_pred             ccccccchhhHHHHHhhhcCCC
Q psy16828        298 CGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       298 C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      |++.|++..+|-.|+..-|+.+
T Consensus       358 Cdr~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  358 CDRFFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             chhhhccchhHHHHHHHhhccc
Confidence            9999999999999998877655

>KOG3623|consensus

Probab=99.89  E-value=3.1e-24  Score=188.77  Aligned_cols=119  Identities=28%  Similarity=0.502  Sum_probs=104.3

Q ss_pred             CeecccccccccChhHHHHHHHhhccCc--eeecccccccccCchhHHHHHHhhcccCCC-CccccccccCcccCCCCcc
Q psy16828         82 PVECSYCGKVLSRKDKLTRHIAAVHSGK--EYPCEQCDRKFTNGYKLKQHMLTHMQKDTS-ISIDVISEIKKFKCDQCDY  158 (372)
Q Consensus        82 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~--~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~-~~~~~~~~~~~~~C~~C~~  158 (372)
                      ...|++|++.+.....|..|++..|...  .|.|.+|.+.|..+..|.+|+..|...... .........+.|+|..|++
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            4679999999999999999987766543  799999999999999999999998765444 4455566678899999999


Q ss_pred             ccCChhhHHHHHhhhcCCCceeecCCCCCcccChHHHHHHHHH
Q psy16828        159 ATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL  201 (372)
Q Consensus       159 ~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  201 (372)
                      .|...-.|+.|+ ++|.++++|.|+.|.+.|....++..||..
T Consensus       290 AFKfKHHLKEHl-RIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  290 AFKFKHHLKEHL-RIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhHHHHHhhh-eeecCCCCcCCcccccccccCCcccccccc
Confidence            999999999998 799999999999999999999999999843

>KOG3623|consensus

Probab=99.82  E-value=6.5e-21  Score=168.13  Aligned_cols=77  Identities=32%  Similarity=0.685  Sum_probs=71.9

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-ccccccc
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTKHML  341 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~h~~  341 (372)
                      .|.|..|++.|...+.|.+|...|+|.+||+|.+|.+.|..+-.|..|+|.|.+++| |.|+.|++.|.-. ....||.
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP-fQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKP-FQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCc-chhhhhhhhcccccchHhhhc
Confidence            499999999999999999999999999999999999999999999999999999999 9999999999655 6666664

>KOG3576|consensus

Probab=99.72  E-value=1.3e-18  Score=130.29  Aligned_cols=124  Identities=21%  Similarity=0.472  Sum_probs=103.1

Q ss_pred             cCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHH
Q psy16828        232 ENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLH  311 (372)
Q Consensus       232 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  311 (372)
                      .+...+.|.+|++.|.-...|.+|++-|...+++-|..||+.|.+.-+|++|+++|+|.+||+|..|++.|+++-.|..|
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            44566889999999988888999999888889999999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCccCCCCCCcCCCCccccccccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        312 MRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       312 ~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ++..|+....|.=                 ..-.+|.|.|..||+....+..+..|++.|+
T Consensus       193 l~kvhgv~~~yay-----------------kerr~kl~vcedcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  193 LKKVHGVQHQYAY-----------------KERRAKLYVCEDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             HHHHcCchHHHHH-----------------HHhhhheeeecccCCCCCChhHHHHHHHhcC
Confidence            9888876542210                 1113578899999999888888888888764

>KOG3576|consensus

Probab=99.62  E-value=1.1e-16  Score=120.01  Aligned_cols=127  Identities=29%  Similarity=0.552  Sum_probs=92.6

Q ss_pred             CCceeecCCCCCcccChHHHHHHHHHhcCCCCcccccchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhH
Q psy16828        176 KEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEH  255 (372)
Q Consensus       176 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H  255 (372)
                      +...+.|..|++.|.-...|.+|++-|...+.+.|..||+.|.+.-+|.+|+++ |+|.+||+|..|++.|..+-+|..|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rt-htgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRT-HTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhcc-ccCccccchhhhhHHHHhhccHHHH
Confidence            455677888888887777788888777777777788888888777778888777 7777778777777777777777777


Q ss_pred             HhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        256 LNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       256 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      ++..|+...            ...     ......+.|.|..||++-.....+..|++.|+...+
T Consensus       193 l~kvhgv~~------------~ya-----ykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  193 LKKVHGVQH------------QYA-----YKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHcCchH------------HHH-----HHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            776665421            000     001234668888888888888888888888887654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.34  E-value=1.6e-12  Score=116.50  Aligned_cols=142  Identities=19%  Similarity=0.439  Sum_probs=94.8

Q ss_pred             CcccccchhhhcChhhhHhhhhhhccCCCCccccc--ccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHH
Q psy16828        207 PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYI--CNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHM  284 (372)
Q Consensus       207 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  284 (372)
                      ...|+.|..... ..+|..|... ..- ....|+.  |+..|. +..+..|         +.|+.|++.|. ...|..|+
T Consensus       407 ~V~C~NC~~~i~-l~~l~lHe~~-C~r-~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~  472 (567)
T PLN03086        407 TVECRNCKHYIP-SRSIALHEAY-CSR-HNVVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHM  472 (567)
T ss_pred             eEECCCCCCccc-hhHHHHHHhh-CCC-cceeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHH
Confidence            356777775543 4445566543 222 3345764  777773 3334444         47888888875 57788888


Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-----------ccccccccccCCCceeCcc
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-----------FRTKHMLVHDVEKSHLCFV  353 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-----------~l~~h~~~h~~~~~~~C~~  353 (372)
                      ..++  .++.|+ ||+.+ .+..|..|+.+|.+.++ +.|..|++.|...           .|..|.... |.+++.|..
T Consensus       473 ~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp-i~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~  546 (567)
T PLN03086        473 KVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRL-ITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDS  546 (567)
T ss_pred             HhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCc-eeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccc
Confidence            8775  778888 88654 56788888888888777 8888888877522           466677764 888888888


Q ss_pred             cCCcccChhhHHHHHh
Q psy16828        354 CGAGFVNDAGLKVHMR  369 (372)
Q Consensus       354 C~~~f~~~~~l~~H~~  369 (372)
                      ||+.+. ..++..|+-
T Consensus       547 Cgk~Vr-lrdm~~H~~  561 (567)
T PLN03086        547 CGRSVM-LKEMDIHQI  561 (567)
T ss_pred             cCCeee-ehhHHHHHH
Confidence            887764 445666654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.34  E-value=1.7e-12  Score=116.25  Aligned_cols=146  Identities=18%  Similarity=0.378  Sum_probs=111.1

Q ss_pred             ceeecCCCCCcccChHHHHHHHHHhcCCCCccccc--chhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhH
Q psy16828        178 YSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKY--CDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEH  255 (372)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H  255 (372)
                      ....|+.|.+.... ..|..|...- ......|+.  |+..|. ...+.          ..+.|+.|++.|. ...|..|
T Consensus       406 ~~V~C~NC~~~i~l-~~l~lHe~~C-~r~~V~Cp~~~Cg~v~~-r~el~----------~H~~C~~Cgk~f~-~s~LekH  471 (567)
T PLN03086        406 DTVECRNCKHYIPS-RSIALHEAYC-SRHNVVCPHDGCGIVLR-VEEAK----------NHVHCEKCGQAFQ-QGEMEKH  471 (567)
T ss_pred             CeEECCCCCCccch-hHHHHHHhhC-CCcceeCCcccccceee-ccccc----------cCccCCCCCCccc-hHHHHHH
Confidence            34579999887553 4566776332 234456874  888773 23333          3358999999995 6789999


Q ss_pred             HhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCccccccc----------chhhHHHHHhhhcCCCCCccCC
Q psy16828        256 LNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFK----------LKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       256 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      +..+|  .++.|+ |++.+ .+..|..|+.+|.+.+++.|+.|++.|.          ..+.|..|.... +.++ +.|.
T Consensus       472 ~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt-~~C~  545 (567)
T PLN03086        472 MKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT-APCD  545 (567)
T ss_pred             HHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcc-eEcc
Confidence            99876  789999 99755 6789999999999999999999999985          245899998885 7777 9999


Q ss_pred             CCCCcCCCCccccccccc
Q psy16828        326 VCHQIFPTDFRTKHMLVH  343 (372)
Q Consensus       326 ~C~~~f~~~~l~~h~~~h  343 (372)
                      .|++.|....|..|+...
T Consensus       546 ~Cgk~Vrlrdm~~H~~~~  563 (567)
T PLN03086        546 SCGRSVMLKEMDIHQIAV  563 (567)
T ss_pred             ccCCeeeehhHHHHHHHh
Confidence            999999888887777543

>PHA00733 hypothetical protein

Probab=99.13  E-value=5.4e-11  Score=86.83  Aligned_cols=82  Identities=21%  Similarity=0.379  Sum_probs=54.0

Q ss_pred             CCCcccccccccccccchHHhH--H---hhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhH
Q psy16828        234 HKPYECYICNKILVSRGRLNEH--L---NQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYV  308 (372)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H--~---~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  308 (372)
                      .+++.|.+|...|.....|..+  +   ..+++.++|.|+.|++.|.+...|..|++.+  ..+|.|+.|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            3445555555555444443333  1   1234466778888888888888888887765  3467888888888888888


Q ss_pred             HHHHhhhcC
Q psy16828        309 NLHMRTHTR  317 (372)
Q Consensus       309 ~~H~~~h~~  317 (372)
                      ..|+...|+
T Consensus       116 ~~H~~~~h~  124 (128)
T PHA00733        116 LDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC
Confidence            888777665

>KOG3993|consensus

Probab=99.00  E-value=1.7e-10  Score=96.91  Aligned_cols=162  Identities=20%  Similarity=0.311  Sum_probs=90.6

Q ss_pred             cccccchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhhhhccCccc--ccccc-cccCChHHHHHHH
Q psy16828        208 YHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFE--CKLCH-KTIVSEKTFKKHM  284 (372)
Q Consensus       208 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~--C~~C~-~~f~~~~~l~~H~  284 (372)
                      |.|..|...|.+.-.|.+|... ......|+|+.|++.|.-..+|..|.+.|-...--.  =.-=. +...+....+.--
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~-RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCP-RIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCC-eeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            7777777777777777777654 444445777777777777777777766554211000  00000 0000000000000


Q ss_pred             hh--hcCCCCcccCcccccccchhhHHHHHhhhcCC--------------------------------------------
Q psy16828        285 AL--HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI--------------------------------------------  318 (372)
Q Consensus       285 ~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------------------------  318 (372)
                      +.  -..+..|.|.+|++.|+....|++|+.+|+..                                            
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence            00  00111356666666666666666665555421                                            


Q ss_pred             -CCCccCCCCCCcCCCC-ccccccccccCCCceeCcccCCcccChhhHHHHHhh
Q psy16828        319 -RPTFECDVCHQIFPTD-FRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       319 -~~~~~C~~C~~~f~~~-~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                       .....|+.|+..+.+. .-..+.+....+..|.|.+|.-.|...-.|.+|+..
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence             1124567777666554 334466666677789999999999999999999864

>PHA00733 hypothetical protein

Probab=98.97  E-value=6.1e-10  Score=81.30  Aligned_cols=83  Identities=13%  Similarity=0.237  Sum_probs=57.5

Q ss_pred             CCCcccccchhhhcChhhhHhh--hh--hhccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHH
Q psy16828        205 AEPYHCKYCDKTFTKRMNVKTH--ER--MKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTF  280 (372)
Q Consensus       205 ~~~~~C~~C~~~f~~~~~l~~H--~~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l  280 (372)
                      .+++.|.+|.+.|..+..|..+  +.  ..+.+++||.|+.|++.|.+...|..|++.+  ..++.|+.|+++|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            3456666666666555555444  11  1234467888888888888888888888764  3468888888888888888


Q ss_pred             HHHHhhhcC
Q psy16828        281 KKHMALHSD  289 (372)
Q Consensus       281 ~~H~~~h~~  289 (372)
                      ..|+...++
T Consensus       116 ~~H~~~~h~  124 (128)
T PHA00733        116 LDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC
Confidence            888877654

>PHA02768 hypothetical protein; Provisional

Probab=98.89  E-value=8.1e-10  Score=65.63  Aligned_cols=38  Identities=24%  Similarity=0.542  Sum_probs=20.3

Q ss_pred             cccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCC
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPT  333 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~  333 (372)
                      |.|+.||+.|...++|..|+++|.  ++ |+|..|++.|..
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~-~kc~~C~k~f~~   43 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TN-LKLSNCKRISLR   43 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--Cc-ccCCcccceecc
Confidence            455555555555555555555555  23 555555555543

>KOG3993|consensus

Probab=98.84  E-value=8.1e-10  Score=92.94  Aligned_cols=197  Identities=16%  Similarity=0.158  Sum_probs=109.6

Q ss_pred             CCeecccccccccChhHHHHHHHhhccCceeecccccccccCchhHHHHHHhhcccCCCCccccccccCcccCCCCcccc
Q psy16828         81 APVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYAT  160 (372)
Q Consensus        81 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~  160 (372)
                      +.|.|..|...|.+...|.+|.-...-...|+|+.|++.|.-..+|..|.++|........    .+..+-+     ...
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~----a~~~P~k-----~~~  336 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAK----AGSPPPK-----QAV  336 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhh----cCCCChh-----hhh
Confidence            4589999999999999999996444444589999999999999999999999865422110    0000000     000


Q ss_pred             CChhhHHHHHh-hhcCCCceeecCCCCCcccChHHHHHHHHHhcCCCC-----------------cccccchhhhcChhh
Q psy16828        161 KDKYNLGTHIK-RRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEP-----------------YHCKYCDKTFTKRMN  222 (372)
Q Consensus       161 ~~~~~l~~H~~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-----------------~~C~~C~~~f~~~~~  222 (372)
                      .+....+.--+ -.-..+..|.|.+|++.|.....|+.|+..|+....                 +.+..+...+.....
T Consensus       337 ~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~  416 (500)
T KOG3993|consen  337 ETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDS  416 (500)
T ss_pred             hhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccc
Confidence            01110100000 000223468888888888888888888777663211                 223333333322221


Q ss_pred             hHhhhhhhccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhh
Q psy16828        223 VKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMAL  286 (372)
Q Consensus       223 l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  286 (372)
                      -..+....-....-..|+.|+..+.++..--.+.+.-+..+.|.|.+|..+|.+...|.+|++.
T Consensus       417 ~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  417 HGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             cccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence            1111111011112234666666666555544444444555566666666666666666666543

>PHA02768 hypothetical protein; Provisional

Probab=98.77  E-value=4.8e-09  Score=62.36  Aligned_cols=44  Identities=16%  Similarity=0.305  Sum_probs=38.9

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHH
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVN  309 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  309 (372)
                      .|.|+.|++.|...+.|..|+++|+  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4789999999999999999999998  7899999999998877664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.68  E-value=1.1e-08  Score=51.90  Aligned_cols=25  Identities=40%  Similarity=1.024  Sum_probs=19.8

Q ss_pred             HHHHHHhhhcCCCCcccCccccccc
Q psy16828        279 TFKKHMALHSDAKPFVCNICGKDFK  303 (372)
Q Consensus       279 ~l~~H~~~h~~~~~~~C~~C~~~f~  303 (372)
                      +|..|+++|+|++||.|+.|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4677888888888888888888775

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.53  E-value=1e-08  Score=52.00  Aligned_cols=24  Identities=38%  Similarity=0.621  Sum_probs=15.5

Q ss_pred             cccccccccCCCceeCcccCCccc
Q psy16828        336 RTKHMLVHDVEKSHLCFVCGAGFV  359 (372)
Q Consensus       336 l~~h~~~h~~~~~~~C~~C~~~f~  359 (372)
                      |..|++.|+|++||.|++|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            445666666666666766766664

...

>PHA00616 hypothetical protein

Probab=98.38  E-value=1.5e-07  Score=53.10  Aligned_cols=29  Identities=24%  Similarity=0.353  Sum_probs=14.6

Q ss_pred             CcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      ||+|+.||+.|...+.|.+|++.|++.++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            34455555555555555555555554444

>PHA00616 hypothetical protein

Probab=98.36  E-value=1.9e-07  Score=52.70  Aligned_cols=34  Identities=12%  Similarity=0.274  Sum_probs=25.9

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      ||+|+.||+.|...++|..|++.|+|++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4677888888888888888888888887777653

>PHA00732 hypothetical protein

Probab=98.28  E-value=6.7e-07  Score=58.93  Aligned_cols=50  Identities=28%  Similarity=0.592  Sum_probs=33.8

Q ss_pred             cccccccccccCChHHHHHHHhh-hcCCCCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMAL-HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      ||.|+.|++.|.+.+.|..|++. |.   ++.|+.||+.|.   .|..|..+..+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~~~   51 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYDIE   51 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCCcc
Confidence            46677777777777777777764 44   246777777776   4777776655543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.23  E-value=1.6e-06  Score=53.02  Aligned_cols=52  Identities=37%  Similarity=0.682  Sum_probs=38.0

Q ss_pred             ccccCcccccccchhHHhhhhhccCcCCCCccCCCCCCCCcchhhHHHhhhhccCCCCCCCCeecccccccccChhHHHH
Q psy16828         21 KVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTR  100 (372)
Q Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~  100 (372)
                      .|.||.|++. .+...|..|+...|..+.                               +.+.|++|...+.  ..|..
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~-------------------------------~~v~CPiC~~~~~--~~l~~   47 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSES-------------------------------KNVVCPICSSRVT--DNLIR   47 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCC-------------------------------CCccCCCchhhhh--hHHHH
Confidence            5889999984 467788899888776421                               4578999887644  37888


Q ss_pred             HHHhhc
Q psy16828        101 HIAAVH  106 (372)
Q Consensus       101 H~~~~h  106 (372)
                      |+...|
T Consensus        48 Hl~~~H   53 (54)
T PF05605_consen   48 HLNSQH   53 (54)
T ss_pred             HHHHhc
Confidence            886665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.21  E-value=1.2e-06  Score=57.81  Aligned_cols=48  Identities=23%  Similarity=0.476  Sum_probs=38.2

Q ss_pred             CcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCcccccccccc
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHD  344 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~~h~  344 (372)
                      ||.|..|++.|.+.+.|..|++.++.  + +.|+.|++.|.  .+..|.+...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~-~~C~~CgKsF~--~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--L-TKCPVCNKSYR--RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--C-CccCCCCCEeC--ChhhhhcccC
Confidence            68999999999999999999985333  2 68999999998  4566665443

>KOG1146|consensus

Probab=98.10  E-value=4e-06  Score=81.33  Aligned_cols=125  Identities=19%  Similarity=0.254  Sum_probs=86.2

Q ss_pred             cCcccccC-CCCCCCCccccCcccccccchhHHhhhhhccCcCCCCccCCCCCCCCcchhhHHHhhhhccCCCCCCCCee
Q psy16828          6 LSDTEAIE-PKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVE   84 (372)
Q Consensus         6 ~~~~~~~~-~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (372)
                      +..+..+. ..++..+.|.|+.|++.|.....|..||+.+|..-....|.        +...............+.++|.
T Consensus       449 ~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~--------~gq~~~~~arg~~~~~~~~p~~  520 (1406)
T KOG1146|consen  449 KRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCK--------AGQNHPRLARGEVYRCPGKPYP  520 (1406)
T ss_pred             hcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhH--------hccccccccccccccCCCCccc
Confidence            33444433 46677799999999999999999999999988765442220        0000000011122334558899


Q ss_pred             cccccccccChhHHHHHHHhhccC-------------------------------------------ceeeccccccccc
Q psy16828         85 CSYCGKVLSRKDKLTRHIAAVHSG-------------------------------------------KEYPCEQCDRKFT  121 (372)
Q Consensus        85 C~~C~~~~~~~~~l~~H~~~~h~~-------------------------------------------~~~~C~~C~~~f~  121 (372)
                      |..|.+.+.+...|.+|+...-..                                           -.+.|.+|++...
T Consensus       521 C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetn  600 (1406)
T KOG1146|consen  521 CRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETN  600 (1406)
T ss_pred             ceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhh
Confidence            999999999999999998543200                                           1388999999998


Q ss_pred             CchhHHHHHHhhcccCC
Q psy16828        122 NGYKLKQHMLTHMQKDT  138 (372)
Q Consensus       122 ~~~~l~~H~~~~~~~~~  138 (372)
                      ....|+.|+...+...+
T Consensus       601 iarnlrihmtss~~s~~  617 (1406)
T KOG1146|consen  601 IARNLRIHMTASPSSSP  617 (1406)
T ss_pred             hhhccccccccCCCCCC
Confidence            88999999876544443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.04  E-value=6.8e-06  Score=50.27  Aligned_cols=49  Identities=27%  Similarity=0.563  Sum_probs=31.9

Q ss_pred             eecccccccccChhHHHHHHHhhccCc--eeecccccccccCchhHHHHHHhhc
Q psy16828         83 VECSYCGKVLSRKDKLTRHIAAVHSGK--EYPCEQCDRKFTNGYKLKQHMLTHM  134 (372)
Q Consensus        83 ~~C~~C~~~~~~~~~l~~H~~~~h~~~--~~~C~~C~~~f~~~~~l~~H~~~~~  134 (372)
                      |.|++|++ .-+...|..|....|...  .+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            66777777 345667777776666643  577777776543  37777776554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.02  E-value=2.6e-06  Score=41.96  Aligned_cols=23  Identities=43%  Similarity=0.904  Sum_probs=21.6

Q ss_pred             eeCcccCCcccChhhHHHHHhhc
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      |.|+.|++.|..+..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999975

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.02  E-value=3.1e-06  Score=59.97  Aligned_cols=73  Identities=19%  Similarity=0.292  Sum_probs=21.6

Q ss_pred             ccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCccccccccccCCCceeCcccCCcccChhhHHHHHhhc
Q psy16828        294 VCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       294 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      +|..|+..|.+...|..|+...|+...    +..........+..+.+.- ....+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~----~~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI----PDQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccccc----ccccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            588999999999999999988776542    1111111112333333221 223699999999999999999999964

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.97  E-value=4e-06  Score=41.23  Aligned_cols=22  Identities=45%  Similarity=0.907  Sum_probs=14.3

Q ss_pred             cccCcccccccchhhHHHHHhh
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRT  314 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~  314 (372)
                      |.|+.|++.|.+++.|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.81  E-value=1.4e-05  Score=39.68  Aligned_cols=24  Identities=38%  Similarity=0.852  Sum_probs=20.4

Q ss_pred             eeCcccCCcccChhhHHHHHhhcC
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999875

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.76  E-value=1.9e-05  Score=55.86  Aligned_cols=73  Identities=21%  Similarity=0.440  Sum_probs=15.4

Q ss_pred             ccCcccccccchhHHhhhhhccCcCCCCccCCCCCCCCcchhhHHHhhhhccCCCCCCCCeecccccccccChhHHHHHH
Q psy16828         23 ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHI  102 (372)
Q Consensus        23 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~  102 (372)
                      +|..|+..|.+...|..||...|....+....-.  ....+.      ...  .......+.|.+|++.|.+...|..|+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~--~~~~~~------~~~--~~~~~~~~~C~~C~~~f~s~~~l~~Hm   70 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLV--DPNRLL------NYL--RKKVKESFRCPYCNKTFRSREALQEHM   70 (100)
T ss_dssp             ----------------------------------------------------------SSEEBSSSS-EESSHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccccccccccc--cccccc------ccc--ccccCCCCCCCccCCCCcCHHHHHHHH
Confidence            5999999999999999999988875443111000  000000      000  000012466777777777777777776


Q ss_pred             Hhh
Q psy16828        103 AAV  105 (372)
Q Consensus       103 ~~~  105 (372)
                      ...
T Consensus        71 ~~~   73 (100)
T PF12756_consen   71 RSK   73 (100)
T ss_dssp             HHT
T ss_pred             cCc
Confidence            543

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.72  E-value=2.1e-05  Score=39.06  Aligned_cols=24  Identities=54%  Similarity=0.996  Sum_probs=14.2

Q ss_pred             cccCcccccccchhhHHHHHhhhc
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                      |.|++|++.|.+...|..|+.+++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666553

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.64  E-value=2.8e-05  Score=39.90  Aligned_cols=26  Identities=38%  Similarity=0.759  Sum_probs=18.5

Q ss_pred             CcccCcccccccchhhHHHHHhhhcC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ||.|..|++.|.+...|..|++.|+.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            46777777777777777777776653

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.58  E-value=3.6e-05  Score=39.46  Aligned_cols=25  Identities=32%  Similarity=0.554  Sum_probs=22.9

Q ss_pred             ceeCcccCCcccChhhHHHHHhhcC
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ||.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999999873

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.21  E-value=0.00014  Score=59.60  Aligned_cols=71  Identities=21%  Similarity=0.325  Sum_probs=49.0

Q ss_pred             CCCccccCc--ccccccchhHHhhhhhccCcCCCCccCCCCCCCCcchhhHHHhhhhccCCCCCCCCeecccccccccCh
Q psy16828         18 KYIKVECPV--CGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRK   95 (372)
Q Consensus        18 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~   95 (372)
                      +++||+|++  |++.+.+...|+-|+..=|............       ..    .   .=..++|||.|.+|++.+.+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~-------~~----~---~F~~~~KPYrCevC~KRYKNl  411 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPE-------KM----N---IFSAKDKPYRCEVCDKRYKNL  411 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCcc-------cc----c---cccccCCceeccccchhhccC
Confidence            359999996  9999999999999998545332211111000       00    0   002344899999999999999


Q ss_pred             hHHHHHH
Q psy16828         96 DKLTRHI  102 (372)
Q Consensus        96 ~~l~~H~  102 (372)
                      ..|..|.
T Consensus       412 NGLKYHr  418 (423)
T COG5189         412 NGLKYHR  418 (423)
T ss_pred             ccceecc
Confidence            9998886

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.14  E-value=0.00047  Score=57.37  Aligned_cols=29  Identities=24%  Similarity=0.473  Sum_probs=21.3

Q ss_pred             ccccCc--ccccccchhHHhhhhhccCcCCC
Q psy16828         21 KVECPV--CGKVLSRKSKLVSHMRSFHTSVT   49 (372)
Q Consensus        21 ~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~   49 (372)
                      .|.||.  |......+..|..|.+..|....
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~  181 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVL  181 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEE
Confidence            467775  77777778888899888775543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.09  E-value=0.00029  Score=40.74  Aligned_cols=40  Identities=23%  Similarity=0.512  Sum_probs=19.2

Q ss_pred             hhhhhhccCCCCcccccccccccccchHHhHHhhhhccCc
Q psy16828        225 THERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQR  264 (372)
Q Consensus       225 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  264 (372)
                      .+.+.+...+.|-.||+|+..+....+|+.|+...|+.+|
T Consensus        13 ~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   13 KKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ---CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3334445556666666666666666666666666665543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.97  E-value=0.00051  Score=33.95  Aligned_cols=23  Identities=22%  Similarity=0.541  Sum_probs=12.8

Q ss_pred             cccCcccccccchhhHHHHHhhhc
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                      |+|+.|++... ...|.+|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666665 666666666654

>smart00355 ZnF_C2H2 zinc finger

Probab=96.97  E-value=0.00054  Score=34.49  Aligned_cols=23  Identities=43%  Similarity=0.732  Sum_probs=21.1

Q ss_pred             eeCcccCCcccChhhHHHHHhhc
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            57999999999999999999876

>KOG2231|consensus

Probab=96.96  E-value=0.0014  Score=60.68  Aligned_cols=14  Identities=36%  Similarity=0.508  Sum_probs=7.7

Q ss_pred             chhHHhhhhhccCc
Q psy16828         33 RKSKLVSHMRSFHT   46 (372)
Q Consensus        33 ~~~~l~~H~~~~H~   46 (372)
                      +...|+.|+...|.
T Consensus       126 s~~~Lk~H~~~~H~  139 (669)
T KOG2231|consen  126 SVENLKNHMRDQHK  139 (669)
T ss_pred             HHHHHHHHHHHhhh
Confidence            45556666655453

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.95  E-value=0.00097  Score=38.66  Aligned_cols=41  Identities=24%  Similarity=0.390  Sum_probs=24.2

Q ss_pred             HHHHhhhcCCCceeecCCCCCcccChHHHHHHHHHhcCCCC
Q psy16828        167 GTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEP  207 (372)
Q Consensus       167 ~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  207 (372)
                      ..+.+.....+.+-.||+|+..+.+..+|++|+...|+.+|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34444445566778888998888888888888888887665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.94  E-value=0.00033  Score=57.61  Aligned_cols=26  Identities=27%  Similarity=0.492  Sum_probs=17.6

Q ss_pred             ccccCcccCCCCccccCChhhHHHHH
Q psy16828        145 ISEIKKFKCDQCDYATKDKYNLGTHI  170 (372)
Q Consensus       145 ~~~~~~~~C~~C~~~~~~~~~l~~H~  170 (372)
                      ....+||+|+.|++.+.+...|+-|.
T Consensus       393 ~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         393 SAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cccCCceeccccchhhccCccceecc
Confidence            34556777777777777777776665

>smart00355 ZnF_C2H2 zinc finger

Probab=96.86  E-value=0.00089  Score=33.63  Aligned_cols=23  Identities=52%  Similarity=0.868  Sum_probs=12.9

Q ss_pred             cccCcccccccchhhHHHHHhhh
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      |.|..|++.|...+.|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            34555666666666666665543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.82  E-value=0.00062  Score=33.63  Aligned_cols=22  Identities=27%  Similarity=0.542  Sum_probs=18.2

Q ss_pred             eeCcccCCcccChhhHHHHHhhc
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      |+|+.|++... +..|.+|++.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            78999999998 99999999985

>KOG2482|consensus

Probab=96.77  E-value=0.0034  Score=52.38  Aligned_cols=53  Identities=23%  Similarity=0.535  Sum_probs=42.9

Q ss_pred             CCeeccccccccc-ChhHHHHHHHhhccC----------------------ceeecccccccccCchhHHHHHHhh
Q psy16828         81 APVECSYCGKVLS-RKDKLTRHIAAVHSG----------------------KEYPCEQCDRKFTNGYKLKQHMLTH  133 (372)
Q Consensus        81 ~~~~C~~C~~~~~-~~~~l~~H~~~~h~~----------------------~~~~C~~C~~~f~~~~~l~~H~~~~  133 (372)
                      ...+|-.|...+. ++.....|+...|+-                      ..+.|-.|.+.|+++..|+.||+..
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK  218 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKK  218 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhc
Confidence            4568999988865 677788888777743                      1489999999999999999999753

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.71  E-value=0.00087  Score=33.47  Aligned_cols=23  Identities=26%  Similarity=0.739  Sum_probs=21.1

Q ss_pred             eeCcccCCcccChhhHHHHHhhc
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      |.|.+|++.|.++..|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999864

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.64  E-value=0.0013  Score=33.55  Aligned_cols=22  Identities=36%  Similarity=0.717  Sum_probs=20.7

Q ss_pred             cccCcccccccchhHHhhhhhc
Q psy16828         22 VECPVCGKVLSRKSKLVSHMRS   43 (372)
Q Consensus        22 ~~C~~C~~~f~~~~~l~~H~~~   43 (372)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999985

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.64  E-value=0.00098  Score=33.28  Aligned_cols=22  Identities=36%  Similarity=0.750  Sum_probs=20.7

Q ss_pred             cccCcccccccchhHHhhhhhc
Q psy16828         22 VECPVCGKVLSRKSKLVSHMRS   43 (372)
Q Consensus        22 ~~C~~C~~~f~~~~~l~~H~~~   43 (372)
                      |.|.+|+..|.+...|+.|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            6899999999999999999985

>KOG2785|consensus

Probab=96.31  E-value=0.0059  Score=52.06  Aligned_cols=80  Identities=14%  Similarity=0.287  Sum_probs=47.8

Q ss_pred             ccccCcccccccchhHHhhhhhc-cCcCC-------CCccCCCCCCCCcchhhHHHhhhhccCCCCCCCCeecccccccc
Q psy16828         21 KVECPVCGKVLSRKSKLVSHMRS-FHTSV-------TPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVL   92 (372)
Q Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~-~H~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~   92 (372)
                      .|+|.-|...|.+...-+.|+++ .|.-.       .|....+.+.........    ...........++.|.+|.+.|
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~----~~~~~~e~~~~~~~c~~c~k~~   78 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDS----EKEENLEEAESVVYCEACNKSF   78 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhh----hhhhhhhhcccceehHHhhccc
Confidence            58999999999999999999974 34321       121111111100000000    0011111223578999999999


Q ss_pred             cChhHHHHHHHh
Q psy16828         93 SRKDKLTRHIAA  104 (372)
Q Consensus        93 ~~~~~l~~H~~~  104 (372)
                      .+......|+..
T Consensus        79 ~s~~a~~~hl~S   90 (390)
T KOG2785|consen   79 ASPKAHENHLKS   90 (390)
T ss_pred             cChhhHHHHHHH
Confidence            999999999854

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.28  E-value=0.0011  Score=33.74  Aligned_cols=22  Identities=32%  Similarity=0.626  Sum_probs=19.1

Q ss_pred             eeCcccCCcccChhhHHHHHhh
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      |.|..|++.|.+...+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999988875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.22  E-value=0.0052  Score=51.40  Aligned_cols=133  Identities=23%  Similarity=0.405  Sum_probs=87.7

Q ss_pred             Ceeccc--ccccccChhHHHHHHHhhccCceeecccccc---cc------cCchhHHHHHHhhcccCCCCccccccccCc
Q psy16828         82 PVECSY--CGKVLSRKDKLTRHIAAVHSGKEYPCEQCDR---KF------TNGYKLKQHMLTHMQKDTSISIDVISEIKK  150 (372)
Q Consensus        82 ~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~C~~C~~---~f------~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~  150 (372)
                      .|.|+.  |..+......|..|+...|+.  +.|.+|-.   .|      .+...|..|...-.+..        +-...
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~--------GFKGH  220 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEE--------GFKGH  220 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCcccc--------CcCCC
Confidence            478887  888888888999998776653  66776642   22      34455666644322110        11122


Q ss_pred             ccCCCCccccCChhhHHHHHhhhcCCCceeecCCCCC-------cccChHHHHHHHHHhcCCCCccccc--ch----hhh
Q psy16828        151 FKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGF-------GCYTNRELEEHQILTHGAEPYHCKY--CD----KTF  217 (372)
Q Consensus       151 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~~~~~~~~~C~~--C~----~~f  217 (372)
                      -.|..|...|-+.+.|..|++..|.     .|-+|+.       .|.+...|..|.+..|    |.|..  |.    ..|
T Consensus       221 P~C~FC~~~FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf  291 (493)
T COG5236         221 PLCIFCKIYFYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVF  291 (493)
T ss_pred             chhhhccceecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEe
Confidence            3589999999999999999977765     4666664       4666777777776554    66654  32    467


Q ss_pred             cChhhhHhhhhhhccC
Q psy16828        218 TKRMNVKTHERMKHEN  233 (372)
Q Consensus       218 ~~~~~l~~H~~~~h~~  233 (372)
                      ...-.|+.|+...|..
T Consensus       292 ~~~~el~~h~~~~h~~  307 (493)
T COG5236         292 PYHTELLEHLTRFHKV  307 (493)
T ss_pred             ccHHHHHHHHHHHhhc
Confidence            7778888888776643

>PRK04860 hypothetical protein; Provisional

Probab=96.11  E-value=0.0026  Score=48.44  Aligned_cols=37  Identities=22%  Similarity=0.679  Sum_probs=24.2

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCCCcccCcccccccc
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKL  304 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  304 (372)
                      +|.|. |+.   ....+..|.++|.++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            46666 665   55556667777777777777777766654

>KOG2893|consensus

Probab=96.11  E-value=0.0018  Score=51.07  Aligned_cols=53  Identities=25%  Similarity=0.402  Sum_probs=44.0

Q ss_pred             CCccccCcccccccchhHHhhhhhccCcCCCCccCCCCCCCCcchhhHHHhhhhccCCCCCCCCeecccccccccChhHH
Q psy16828         19 YIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSYCGKVLSRKDKL   98 (372)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l   98 (372)
                      ..+-+|=.||+.|.....|..|++.                                     +-|+|.+|.+..-+.-.|
T Consensus         8 ~~kpwcwycnrefddekiliqhqka-------------------------------------khfkchichkkl~sgpgl   50 (341)
T KOG2893|consen    8 VDKPWCWYCNREFDDEKILIQHQKA-------------------------------------KHFKCHICHKKLFSGPGL   50 (341)
T ss_pred             cCCceeeecccccchhhhhhhhhhh-------------------------------------ccceeeeehhhhccCCCc
Confidence            3445699999999999999999887                                     558999999998888888


Q ss_pred             HHHHHhhccC
Q psy16828         99 TRHIAAVHSG  108 (372)
Q Consensus        99 ~~H~~~~h~~  108 (372)
                      ..|....|.+
T Consensus        51 sihcmqvhke   60 (341)
T KOG2893|consen   51 SIHCMQVHKE   60 (341)
T ss_pred             eeehhhhhhh
Confidence            8888777765

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.78  E-value=0.0077  Score=29.91  Aligned_cols=21  Identities=33%  Similarity=0.632  Sum_probs=16.5

Q ss_pred             eeCcccCCcccChhhHHHHHhh
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      ..|+.||+.| ....|..|++.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4588888888 77888888764

>KOG1146|consensus

Probab=95.75  E-value=0.0051  Score=60.79  Aligned_cols=76  Identities=14%  Similarity=0.328  Sum_probs=48.6

Q ss_pred             cccchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhhhhc-------------------------cCc
Q psy16828        210 CKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL-------------------------AQR  264 (372)
Q Consensus       210 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-------------------------~~~  264 (372)
                      |..|+..+.+...+..|+...+.-.+.++|+.|++.+.....|..|++..|.                         .++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            3344455555555555555555556777777777777777777777776432                         235


Q ss_pred             ccccccccccCChHHHHHHHh
Q psy16828        265 FECKLCHKTIVSEKTFKKHMA  285 (372)
Q Consensus       265 ~~C~~C~~~f~~~~~l~~H~~  285 (372)
                      |.|..|..++....+|.+|+.
T Consensus       519 ~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHH
Confidence            667777777777666666654

>KOG2482|consensus

Probab=95.72  E-value=0.025  Score=47.50  Aligned_cols=51  Identities=20%  Similarity=0.315  Sum_probs=34.9

Q ss_pred             ccccccccccCChHHHHHHHhhhcC---------------------------CCCcccCcccccccchhhHHHHHhhh
Q psy16828        265 FECKLCHKTIVSEKTFKKHMALHSD---------------------------AKPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       265 ~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      ..|-.|.....+...|..|+..-+.                           ...-.|-.|+-.|.....|..|+.-+
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            4677777766667777777654321                           01235888999999999999998654

>KOG2785|consensus

Probab=95.62  E-value=0.037  Score=47.43  Aligned_cols=52  Identities=19%  Similarity=0.453  Sum_probs=42.2

Q ss_pred             CeecccccccccChhHHHHHHHhh-c------------------------------------cCceeecccccccccCch
Q psy16828         82 PVECSYCGKVLSRKDKLTRHIAAV-H------------------------------------SGKEYPCEQCDRKFTNGY  124 (372)
Q Consensus        82 ~~~C~~C~~~~~~~~~l~~H~~~~-h------------------------------------~~~~~~C~~C~~~f~~~~  124 (372)
                      .|.|..|...|.+...-+.|++.. |                                    ...++.|..|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            488999999999998888898532 2                                    012589999999999999


Q ss_pred             hHHHHHHhh
Q psy16828        125 KLKQHMLTH  133 (372)
Q Consensus       125 ~l~~H~~~~  133 (372)
                      ....|+..-
T Consensus        83 a~~~hl~Sk   91 (390)
T KOG2785|consen   83 AHENHLKSK   91 (390)
T ss_pred             hHHHHHHHh
Confidence            999998754

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.48  E-value=0.011  Score=29.38  Aligned_cols=21  Identities=29%  Similarity=0.630  Sum_probs=15.4

Q ss_pred             cccCcccccccchhhHHHHHhh
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRT  314 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~  314 (372)
                      ..|+.||+.| ..+.|..|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4688888888 67777877654

>PRK04860 hypothetical protein; Provisional

Probab=95.08  E-value=0.015  Score=44.34  Aligned_cols=35  Identities=23%  Similarity=0.591  Sum_probs=20.0

Q ss_pred             CcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIF  331 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f  331 (372)
                      +|.|. |+.   ....+..|.+++.+.++ |.|..|+..|
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~-YrC~~C~~~l  153 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAV-YRCRRCGETL  153 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCcc-EECCCCCcee
Confidence            46665 665   44555666666665555 5555555544

>KOG2231|consensus

Probab=94.90  E-value=0.038  Score=51.67  Aligned_cols=100  Identities=19%  Similarity=0.373  Sum_probs=53.7

Q ss_pred             ecCCCCCcccChHHHHHHHHHhcCCCCcccccch----------hhhcChhhhHhhhhhhccCCCC----cccccccccc
Q psy16828        181 LCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCD----------KTFTKRMNVKTHERMKHENHKP----YECYICNKIL  246 (372)
Q Consensus       181 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~----------~~f~~~~~l~~H~~~~h~~~~~----~~C~~C~~~f  246 (372)
                      .|..| ..|.+...|..|+...|.  .+.|..|-          +.| +...|..|+...-.+++.    -.|..|...|
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Y-t~~el~~h~~~gd~d~~s~rGhp~C~~C~~~f  192 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLY-TRAELNLHLMFGDPDDESCRGHPLCKFCHERF  192 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehe-hHHHHHHHHhcCCCccccccCCccchhhhhhh
Confidence            46667 666777777777755543  24444442          222 344566665542222211    3466666666


Q ss_pred             cccchHHhHHhhhhccCcccccccc------cccCChHHHHHHHhhhc
Q psy16828        247 VSRGRLNEHLNQVHLAQRFECKLCH------KTIVSEKTFKKHMALHS  288 (372)
Q Consensus       247 ~~~~~l~~H~~~~~~~~~~~C~~C~------~~f~~~~~l~~H~~~h~  288 (372)
                      .....|..|++..|    |.|..|.      .-|....+|..|.+.++
T Consensus       193 ld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  193 LDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             ccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            66666666666544    3344442      33445556666665544

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.67  E-value=0.14  Score=36.07  Aligned_cols=24  Identities=33%  Similarity=0.535  Sum_probs=13.0

Q ss_pred             ceeCcccCCcccChhhHHHHHhhc
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      .|.|+.|...|-..-+...|..+|
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhcc
Confidence            455555555555555555555444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.34  E-value=0.027  Score=30.64  Aligned_cols=24  Identities=13%  Similarity=0.422  Sum_probs=21.6

Q ss_pred             CccccCcccccccchhHHhhhhhc
Q psy16828         20 IKVECPVCGKVLSRKSKLVSHMRS   43 (372)
Q Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~   43 (372)
                      .+|.|.+|+..|.+...+..|+..
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            368999999999999999999875

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.05  E-value=0.044  Score=29.76  Aligned_cols=24  Identities=17%  Similarity=0.627  Sum_probs=21.1

Q ss_pred             CceeCcccCCcccChhhHHHHHhh
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      .+|.|.+|+..|.+...+..|++.
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            368999999999999999999874

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=93.98  E-value=0.045  Score=27.39  Aligned_cols=24  Identities=29%  Similarity=0.758  Sum_probs=16.0

Q ss_pred             cCCCCCCcCCCCccccccccccCCCceeCcccCCccc
Q psy16828        323 ECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFV  359 (372)
Q Consensus       323 ~C~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~~f~  359 (372)
                      .||.|++..+..             .-.|+.||+.|.
T Consensus         2 ~CP~C~~~V~~~-------------~~~Cp~CG~~F~   25 (26)
T PF10571_consen    2 TCPECGAEVPES-------------AKFCPHCGYDFE   25 (26)
T ss_pred             cCCCCcCCchhh-------------cCcCCCCCCCCc
Confidence            477787766433             234888888885

Several members are annotated as putative helicases.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.37  E-value=0.05  Score=49.90  Aligned_cols=152  Identities=21%  Similarity=0.336  Sum_probs=98.3

Q ss_pred             CCcccccchhhhcChhhhHhhhhh-hccCC--CCcccc--cccccccccchHHhHHhhhhccCcccccccc--cccCChH
Q psy16828        206 EPYHCKYCDKTFTKRMNVKTHERM-KHENH--KPYECY--ICNKILVSRGRLNEHLNQVHLAQRFECKLCH--KTIVSEK  278 (372)
Q Consensus       206 ~~~~C~~C~~~f~~~~~l~~H~~~-~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~--~~f~~~~  278 (372)
                      .++.|..|...|.....+..|.+. .|.++  +++.|+  .|++.|.....+..|...+.+..++.+..-.  ..+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            367888888888888888888883 48888  888888  7888888888888888888877766665533  2222221


Q ss_pred             HH-----HHHHhhhcCCCCcccC--cccccccchhhHHHHHhhhcCCCC-CccCCCCCCcCCCC-ccccccccccCCCce
Q psy16828        279 TF-----KKHMALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIRP-TFECDVCHQIFPTD-FRTKHMLVHDVEKSH  349 (372)
Q Consensus       279 ~l-----~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~~C~~C~~~f~~~-~l~~h~~~h~~~~~~  349 (372)
                      .-     ......-.....+.+.  .|...+.....+..|...+-..++ .+.+..|.+.+... .+..|++.+....++
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPL  447 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCce
Confidence            11     1111111112222222  266666777777777777665442 26777788888666 667777887777776


Q ss_pred             eCcccCCc
Q psy16828        350 LCFVCGAG  357 (372)
Q Consensus       350 ~C~~C~~~  357 (372)
                      .|..++..
T Consensus       448 ~~~~~~~~  455 (467)
T COG5048         448 LCSILKSF  455 (467)
T ss_pred             eecccccc
Confidence            66555433

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.33  E-value=0.054  Score=49.68  Aligned_cols=107  Identities=26%  Similarity=0.456  Sum_probs=60.8

Q ss_pred             cccccccccccCChHHHHHHHh--hhcCC--CCcccC--cccccccchhhHHHHHhhhcCCCCCccCCC-----------
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMA--LHSDA--KPFVCN--ICGKDFKLKYYVNLHMRTHTRIRPTFECDV-----------  326 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~-----------  326 (372)
                      ++.|..|...|.....+..|.+  .|.++  +++.|+  .|++.|.+...+..|...|.+..+ +.+..           
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  367 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP-AKEKLLNSSSKFSPLL  367 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCc-cccccccCcccccccc
Confidence            4556666666666666666666  56665  566666  566666666666666666555443 22222           


Q ss_pred             --------------------------CCCcCCCC-ccccccccccCCC--ceeCcccCCcccChhhHHHHHhhc
Q psy16828        327 --------------------------CHQIFPTD-FRTKHMLVHDVEK--SHLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       327 --------------------------C~~~f~~~-~l~~h~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                                                |...+.+. .+..|...+....  .+.+..|...|.....+..|++.|
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIH  441 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccccc
Confidence                                      11122111 2222333333333  467888999998888888888765

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.17  E-value=0.11  Score=27.86  Aligned_cols=10  Identities=50%  Similarity=1.086  Sum_probs=5.5

Q ss_pred             CceeCcccCC
Q psy16828        347 KSHLCFVCGA  356 (372)
Q Consensus       347 ~~~~C~~C~~  356 (372)
                      .++.|++||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4455666654

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.75  E-value=0.21  Score=35.69  Aligned_cols=89  Identities=18%  Similarity=0.272  Sum_probs=47.8

Q ss_pred             CCCCccccCcccccccchhHHhhhhhccCcCCCCccC----------CCCCCCCcchhhHHHhhhhccCCCCCCCCeec-
Q psy16828         17 SKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAG----------GDNNDTSGHMSQIQTMLMLDHKKPKSRAPVEC-   85 (372)
Q Consensus        17 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C-   85 (372)
                      .......|..|...... ..+..|++..|........          .........+. ................-|.| 
T Consensus         7 ~~~~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-~p~~~~~Pi~gLp~~~G~~C~   84 (109)
T PF12013_consen    7 PEYRVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQ-IPPDPSPPIPGLPVYDGYRCQ   84 (109)
T ss_pred             CcCCEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccC-CCCCCCCcCCCCCCCCCeeee
Confidence            34567889999988766 8899999976654322100          00000000000 00000000111111134788 


Q ss_pred             ---ccccccccChhHHHHHHHhhcc
Q psy16828         86 ---SYCGKVLSRKDKLTRHIAAVHS  107 (372)
Q Consensus        86 ---~~C~~~~~~~~~l~~H~~~~h~  107 (372)
                         ..|++.+.+...|..|+...|+
T Consensus        85 ~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   85 CDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             cCCCCCCcEeccHHHHHHHHHHhcC
Confidence               8888888888888888877664

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.89  E-value=0.14  Score=30.39  Aligned_cols=31  Identities=26%  Similarity=0.593  Sum_probs=23.7

Q ss_pred             CCCCCeecccccccccChhHHHHHHHhhccC
Q psy16828         78 KSRAPVECSYCGKVLSRKDKLTRHIAAVHSG  108 (372)
Q Consensus        78 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~  108 (372)
                      +++..+.|+-|+..|..+.++.+|+...|+.
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~~   43 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHGW   43 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhhh
Confidence            3446778888888888888888888776654

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=90.67  E-value=0.15  Score=31.00  Aligned_cols=31  Identities=19%  Similarity=0.443  Sum_probs=17.5

Q ss_pred             ccCCCCCCc-CCCCccccccccccCCCceeCcccCCc
Q psy16828        322 FECDVCHQI-FPTDFRTKHMLVHDVEKSHLCFVCGAG  357 (372)
Q Consensus       322 ~~C~~C~~~-f~~~~l~~h~~~h~~~~~~~C~~C~~~  357 (372)
                      |.|+.||+. ..+-.--+     .-..+|.|+.||+.
T Consensus        26 F~CPnCG~~~I~RC~~CR-----k~~~~Y~CP~CGF~   57 (59)
T PRK14890         26 FLCPNCGEVIIYRCEKCR-----KQSNPYTCPKCGFE   57 (59)
T ss_pred             eeCCCCCCeeEeechhHH-----hcCCceECCCCCCc
Confidence            777777765 33221000     01257999999863

>KOG4173|consensus

Probab=89.70  E-value=0.23  Score=38.63  Aligned_cols=73  Identities=23%  Similarity=0.387  Sum_probs=34.3

Q ss_pred             CccccCChhhHHHHHhhhcCCCceeecCCCCCcccChHHHHHHHHHhc----------CCCCccccc--chhhhcChhhh
Q psy16828        156 CDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTH----------GAEPYHCKY--CDKTFTKRMNV  223 (372)
Q Consensus       156 C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~----------~~~~~~C~~--C~~~f~~~~~l  223 (372)
                      |...|.+.+....|....|.    ..|..|.+.|++.--|..|+..-|          |..-|.|-.  |+..|.+...-
T Consensus        87 c~~~~d~lD~~E~hY~~~h~----~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~R  162 (253)
T KOG4173|consen   87 CCQVFDALDDYEHHYHTLHG----NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDR  162 (253)
T ss_pred             hHHHHhhhhhHHHhhhhccc----chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhh
Confidence            44445444444444322222    135555555555554554543332          233455533  66666665555


Q ss_pred             Hhhhhhhcc
Q psy16828        224 KTHERMKHE  232 (372)
Q Consensus       224 ~~H~~~~h~  232 (372)
                      ..|+...|.
T Consensus       163 kdH~I~~Hk  171 (253)
T KOG4173|consen  163 KDHMIRMHK  171 (253)
T ss_pred             hhHHHHhcc
Confidence            555554443

>KOG2893|consensus

Probab=89.25  E-value=0.16  Score=40.36  Aligned_cols=41  Identities=24%  Similarity=0.359  Sum_probs=18.6

Q ss_pred             CCCCccccCChhhHHHHHhhhcCCCceeecCCCCCcccChHHHHHH
Q psy16828        153 CDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEH  198 (372)
Q Consensus       153 C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H  198 (372)
                      |=.|++.|.++..|..|.+.     +-|+|-+|.+.+.+-..|..|
T Consensus        13 cwycnrefddekiliqhqka-----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceee
Confidence            44455555554444444322     224455555444444444444

>KOG4173|consensus

Probab=89.12  E-value=0.25  Score=38.50  Aligned_cols=88  Identities=19%  Similarity=0.399  Sum_probs=48.3

Q ss_pred             ccccc--chhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHh
Q psy16828        208 YHCKY--CDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMA  285 (372)
Q Consensus       208 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  285 (372)
                      +.|+.  |...|.+......|....|.+    .|..|.+.|.+...|..|+..-|..                  .-...
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs------------------~Fqa~  137 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDS------------------LFQAL  137 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHH------------------HHHHH
Confidence            45654  556666666555665443333    5666666666666666665422210                  00012


Q ss_pred             hhcCCCCcccCc--ccccccchhhHHHHHhhhcC
Q psy16828        286 LHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       286 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  317 (372)
                      +..|...|+|..  |+..|.+...-..|+-.-|.
T Consensus       138 veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  138 VERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             HHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence            223556677743  77777777777777655444

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=88.65  E-value=0.29  Score=26.39  Aligned_cols=24  Identities=38%  Similarity=0.868  Sum_probs=13.3

Q ss_pred             ccCCCCCCcCCCCccccccccccCCCceeCcccCC
Q psy16828        322 FECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGA  356 (372)
Q Consensus       322 ~~C~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~  356 (372)
                      |.|.+||.++...           +.|..|++||.
T Consensus         3 ~~C~~CG~i~~g~-----------~~p~~CP~Cg~   26 (34)
T cd00729           3 WVCPVCGYIHEGE-----------EAPEKCPICGA   26 (34)
T ss_pred             EECCCCCCEeECC-----------cCCCcCcCCCC
Confidence            5666666654322           13456777765

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.21  E-value=0.24  Score=29.39  Aligned_cols=30  Identities=27%  Similarity=0.294  Sum_probs=25.5

Q ss_pred             ccccCCCceeCcccCCcccChhhHHHHHhh
Q psy16828        341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      ..-.||--+.||.||..|..+....+|+..
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            345678889999999999999999999864

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=86.95  E-value=1.3  Score=31.65  Aligned_cols=26  Identities=15%  Similarity=0.395  Sum_probs=18.6

Q ss_pred             CCeecccccccccChhHHHHHHHhhcc
Q psy16828         81 APVECSYCGKVLSRKDKLTRHIAAVHS  107 (372)
Q Consensus        81 ~~~~C~~C~~~~~~~~~l~~H~~~~h~  107 (372)
                      +.+.|..|...... .++..|++..|.
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~   35 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHH   35 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcc
Confidence            55778888887655 778888875543

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=86.64  E-value=1.3  Score=31.27  Aligned_cols=48  Identities=13%  Similarity=0.115  Sum_probs=24.9

Q ss_pred             cCCCCccccCChhhHHHHHhhhcCCCceeecCCCCCcccChHHHHHHHHHh
Q psy16828        152 KCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILT  202 (372)
Q Consensus       152 ~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  202 (372)
                      .|-.|...|........   ..-.....|.|+.|...|-..-++-.|...|
T Consensus        57 ~C~~C~~~f~~~~~~~~---~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSPF---DELKDSHRYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             cccCcCCCCCCcccccc---cccccccceeCCCCCCccccccchhhhhhcc
Confidence            47777777765421110   0012233566777766666665555665444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=86.42  E-value=0.24  Score=40.07  Aligned_cols=92  Identities=21%  Similarity=0.569  Sum_probs=49.1

Q ss_pred             hcCCCCcccccchhhhcChhhhHhhhhhh-ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHH
Q psy16828        202 THGAEPYHCKYCDKTFTKRMNVKTHERMK-HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTF  280 (372)
Q Consensus       202 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l  280 (372)
                      .|+.+.|.|.+|....-....+ .|+..- -.....|+|.-|++.-                 .|.|--|.-.|-.    
T Consensus       137 ~hGGrif~CsfC~~flCEDDQF-EHQAsCQvLe~E~~KC~SCNrlG-----------------q~sCLRCK~cfCd----  194 (314)
T PF06524_consen  137 DHGGRIFKCSFCDNFLCEDDQF-EHQASCQVLESETFKCQSCNRLG-----------------QYSCLRCKICFCD----  194 (314)
T ss_pred             cCCCeEEEeecCCCeeeccchh-hhhhhhhhhhccccccccccccc-----------------chhhhheeeeehh----
Confidence            3567778888887443322222 233221 2233557777776532                 2445555444443    


Q ss_pred             HHHHhhh----cCCCCcccCcccccccchhhHHHHHhhhc
Q psy16828        281 KKHMALH----SDAKPFVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       281 ~~H~~~h----~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                       .|++.-    ...+++.||.|++....-..|..-.++|.
T Consensus       195 -dHvrrKg~ky~k~k~~PCPKCg~et~eTkdLSmStR~hk  233 (314)
T PF06524_consen  195 -DHVRRKGFKYEKGKPIPCPKCGYETQETKDLSMSTRSHK  233 (314)
T ss_pred             -hhhhhcccccccCCCCCCCCCCCcccccccceeeeecch
Confidence             333321    23367788888887766666655555553

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=85.31  E-value=0.55  Score=33.19  Aligned_cols=13  Identities=46%  Similarity=1.237  Sum_probs=6.4

Q ss_pred             CCcccCccccccc
Q psy16828        291 KPFVCNICGKDFK  303 (372)
Q Consensus       291 ~~~~C~~C~~~f~  303 (372)
                      .|..||.||..|.
T Consensus        25 ~PivCP~CG~~~~   37 (108)
T PF09538_consen   25 DPIVCPKCGTEFP   37 (108)
T ss_pred             CCccCCCCCCccC
Confidence            4444555555443

The function of members of this family is unknown.

>PHA00626 hypothetical protein

Probab=84.94  E-value=0.31  Score=29.07  Aligned_cols=11  Identities=36%  Similarity=0.830  Sum_probs=5.8

Q ss_pred             CcccCcccccc
Q psy16828        292 PFVCNICGKDF  302 (372)
Q Consensus       292 ~~~C~~C~~~f  302 (372)
                      .|.|+.||+.|
T Consensus        23 rYkCkdCGY~f   33 (59)
T PHA00626         23 DYVCCDCGYND   33 (59)
T ss_pred             ceEcCCCCCee
Confidence            35555555555

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=84.50  E-value=0.8  Score=27.84  Aligned_cols=10  Identities=40%  Similarity=1.158  Sum_probs=6.5

Q ss_pred             CCcccCcccc
Q psy16828        291 KPFVCNICGK  300 (372)
Q Consensus       291 ~~~~C~~C~~  300 (372)
                      .+|.|+.||+
T Consensus        49 ~~Y~Cp~CGF   58 (61)
T COG2888          49 NPYRCPKCGF   58 (61)
T ss_pred             CceECCCcCc
Confidence            4667776665

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=84.10  E-value=0.64  Score=27.07  Aligned_cols=11  Identities=18%  Similarity=0.727  Sum_probs=6.4

Q ss_pred             ccCCCCCCcCC
Q psy16828        322 FECDVCHQIFP  332 (372)
Q Consensus       322 ~~C~~C~~~f~  332 (372)
                      |+|+.|+..|.
T Consensus         4 y~C~~CG~~~~   14 (46)
T PRK00398          4 YKCARCGREVE   14 (46)
T ss_pred             EECCCCCCEEE
Confidence            56666665543

>PF02176 zf-TRAF: TRAF-type zinc finger; PDB: 2EOD_A 2YUC_A 3HCU_A 3HCS_B 3HCT_A

Probab=83.89  E-value=0.26  Score=30.67  Aligned_cols=33  Identities=21%  Similarity=0.492  Sum_probs=15.0

Q ss_pred             CcccCc--ccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        292 PFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       292 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      +..|+.  |...+ .+..|..|+...-..++ ..|+.
T Consensus         9 ~v~C~~~cc~~~i-~r~~l~~H~~~~C~~~~-v~C~~   43 (60)
T PF02176_consen    9 PVPCPNGCCNEMI-PRKELDDHLENECPKRP-VPCPY   43 (60)
T ss_dssp             EEE-TT--S-BEE-ECCCHHHHHHTTSTTSE-EE-SS
T ss_pred             EeeCCCCCcccce-eHHHHHHHHHccCCCCc-EECCC
Confidence            345555  33333 35566666664444444 55555

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=83.37  E-value=0.58  Score=25.91  Aligned_cols=11  Identities=27%  Similarity=0.549  Sum_probs=6.5

Q ss_pred             ceeCcccCCcc
Q psy16828        348 SHLCFVCGAGF  358 (372)
Q Consensus       348 ~~~C~~C~~~f  358 (372)
                      ...|+.|+..|
T Consensus        25 ~v~C~~C~~~~   35 (38)
T TIGR02098        25 KVRCGKCGHVW   35 (38)
T ss_pred             EEECCCCCCEE
Confidence            35566666655

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=83.19  E-value=0.85  Score=32.27  Aligned_cols=29  Identities=31%  Similarity=0.739  Sum_probs=15.4

Q ss_pred             ccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC
Q psy16828        294 VCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD  334 (372)
Q Consensus       294 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~  334 (372)
                      .|+.||..|...           +..| ..||.||..|.-.
T Consensus        11 ~Cp~CG~kFYDL-----------nk~P-ivCP~CG~~~~~~   39 (108)
T PF09538_consen   11 TCPSCGAKFYDL-----------NKDP-IVCPKCGTEFPPE   39 (108)
T ss_pred             cCCCCcchhccC-----------CCCC-ccCCCCCCccCcc
Confidence            466666666532           1123 5566666666443

The function of members of this family is unknown.

>KOG2186|consensus

Probab=82.76  E-value=1  Score=36.60  Aligned_cols=47  Identities=19%  Similarity=0.610  Sum_probs=39.0

Q ss_pred             CeecccccccccChhHHHHHHHhhccCceeecccccccccCchhHHHHHH
Q psy16828         82 PVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHML  131 (372)
Q Consensus        82 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  131 (372)
                      .|.|..|+....- ..+.+|+.+.++ .-|.|-.|+..|.. .++..|..
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            5889999998754 467789988887 67999999999975 88888864

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=82.58  E-value=1.2  Score=34.07  Aligned_cols=23  Identities=43%  Similarity=0.993  Sum_probs=16.0

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCCCcccCccc
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICG  299 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  299 (372)
                      .|.|++||+.             +.|+.|-+||+||
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCC
Confidence            5777777754             3456777787777

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.38  E-value=0.66  Score=37.69  Aligned_cols=25  Identities=36%  Similarity=0.676  Sum_probs=20.0

Q ss_pred             CCccccCcccccccchhHHhhhhhc
Q psy16828         19 YIKVECPVCGKVLSRKSKLVSHMRS   43 (372)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~l~~H~~~   43 (372)
                      .+.+.||+|+..|.++.......+.
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~   27 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRV   27 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceE
Confidence            3678999999999998876666654

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=82.33  E-value=0.55  Score=38.15  Aligned_cols=17  Identities=24%  Similarity=0.337  Sum_probs=8.4

Q ss_pred             CceeCcccCCcccChhh
Q psy16828        347 KSHLCFVCGAGFVNDAG  363 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~  363 (372)
                      +++.||.||+....-..
T Consensus       208 k~~PCPKCg~et~eTkd  224 (314)
T PF06524_consen  208 KPIPCPKCGYETQETKD  224 (314)
T ss_pred             CCCCCCCCCCccccccc
Confidence            45555555555444333

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=82.31  E-value=0.89  Score=26.17  Aligned_cols=11  Identities=27%  Similarity=1.180  Sum_probs=5.3

Q ss_pred             cccCccccccc
Q psy16828        293 FVCNICGKDFK  303 (372)
Q Consensus       293 ~~C~~C~~~f~  303 (372)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            44555554443

present in RNA polymerase I, II and III

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=81.74  E-value=1.3  Score=33.93  Aligned_cols=37  Identities=19%  Similarity=0.490  Sum_probs=26.0

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIF  331 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f  331 (372)
                      ....+..-|.|+.|+..|+.-.++..         . |.||.||...
T Consensus       102 ~~e~~~~~Y~Cp~c~~r~tf~eA~~~---------~-F~Cp~Cg~~L  138 (158)
T TIGR00373       102 EFETNNMFFICPNMCVRFTFNEAMEL---------N-FTCPRCGAML  138 (158)
T ss_pred             hhccCCCeEECCCCCcEeeHHHHHHc---------C-CcCCCCCCEe
Confidence            33445566888888888887777752         2 8888888653

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=81.44  E-value=0.87  Score=25.08  Aligned_cols=6  Identities=50%  Similarity=1.364  Sum_probs=2.3

Q ss_pred             ccCccc
Q psy16828        294 VCNICG  299 (372)
Q Consensus       294 ~C~~C~  299 (372)
                      +|+.|+
T Consensus        27 rC~~C~   32 (37)
T PF13719_consen   27 RCPKCG   32 (37)
T ss_pred             ECCCCC
Confidence            333333

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=81.06  E-value=0.33  Score=39.00  Aligned_cols=32  Identities=25%  Similarity=0.472  Sum_probs=25.7

Q ss_pred             CCCCCccccCcccccccchhHHhhhhhccCcC
Q psy16828         16 PSKYIKVECPVCGKVLSRKSKLVSHMRSFHTS   47 (372)
Q Consensus        16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   47 (372)
                      -....+|.|++|++.|.-..-+++|+...|.+
T Consensus        72 e~~~~K~~C~lc~KlFkg~eFV~KHI~nKH~e  103 (214)
T PF04959_consen   72 EEDEDKWRCPLCGKLFKGPEFVRKHIFNKHPE  103 (214)
T ss_dssp             SSSSEEEEE-SSS-EESSHHHHHHHHHHH-HH
T ss_pred             HHcCCEECCCCCCcccCChHHHHHHHhhcCHH
Confidence            34667899999999999999999999998975

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=80.86  E-value=1.9  Score=21.05  Aligned_cols=10  Identities=30%  Similarity=0.587  Sum_probs=7.1

Q ss_pred             CceeCcccCC
Q psy16828        347 KSHLCFVCGA  356 (372)
Q Consensus       347 ~~~~C~~C~~  356 (372)
                      .+|.|+.||+
T Consensus        15 v~f~CPnCG~   24 (24)
T PF07754_consen   15 VPFPCPNCGF   24 (24)
T ss_pred             ceEeCCCCCC
Confidence            4678888874

It is likely to bind zinc via its four well-conserved cysteine residues.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	372
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-20
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-20
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-08
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		9e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		6e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		6e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		7e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		9e-07
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		1e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		4e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		8e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-04
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		6e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		7e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 131 LTHMQKDTSISIDVISEIKK-FKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGC 189
           ++     +S++   +   +K + C +C  +     +L  H +R HT E    C +CG   
Sbjct: 1   ISEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSF 59
Query: 190 YTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSR 249
              ++L  HQ    G +PY C  C K+F++R N++ H+R  H   KPY C  C K     
Sbjct: 60  SDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT-HTGEKPYACPECGKSFSQL 118
Query: 250 GRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYV 308
             L  H  + H  ++ ++C  C K+   E     H   H+  KP+ C  CGK F  +  +
Sbjct: 119 AHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDAL 177
Query: 309 NLHMRTHT 316
           N+H RTHT
Sbjct: 178 NVHQRTHT 185

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 200 ILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQV 259
            L  G +PY C  C K+F++  ++  H+R  H   KPY+C  C K    +  L  H  + 
Sbjct: 14  ALEPGEKPYACPECGKSFSRSDHLAEHQRT-HTGEKPYKCPECGKSFSDKKDLTRH-QRT 71
Query: 260 HLAQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI 318
           H  ++ ++C  C K+       + H   H+  KP+ C  CGK F    ++  H RTHT  
Sbjct: 72  HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131
Query: 319 RPTFECDVCHQIFP-TDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           +P ++C  C + F   D    H   H  EK + C  CG  F     L VH R H
Sbjct: 132 KP-YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHMLVHDVEKSH 349
           K F+C  CG+ F   Y + +H RTHT  RP + CD+CH+ F   D    H  +H  EK  
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERP-YTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 350 LCFVCGAGFVNDAGLKVH 367
            C  CG GF     L VH
Sbjct: 75  KCQECGKGFCQSRTLAVH 92

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 28/107 (26%)
Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
           F+CK+C K+     T   H+ +HSD +P+ C  CGK F  K                   
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQK------------------- 42
Query: 325 DVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
                   +D + KH  +H  EK H C VCG  F   + L  H RKH
Sbjct: 43  --------SDMK-KHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C K+   +    +HM++H   +P+ C +CGK FK+K+++  HM+ HT I+P +EC++C +
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-YECNICAK 73
Query: 330 IF 331
            F
Sbjct: 74  RF 75

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +    +     H+ +H+  KPF C IC ++F  +  +N H+RTHT  +P F CD+C +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKP-FACDICGR 70
Query: 330 IFPT-DFRTKHMLVHDVEK 347
            F T   RT+H  +H  +K
Sbjct: 71  KFATLHTRTRHTKIHLRQK 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 236 PYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC 295
           P++C +C K    + +L  H+      + ++CK C        +  KH+ +HSD +PF C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 296 NICGKDFKLKYYVNLHMRTHT 316
            IC    +    + +H+R+HT
Sbjct: 68  QICPYASRNSSQLTVHLRSHT 88

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 290 AKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC-HQIFPTDFRTKHMLVHDVEKS 348
           + P  C +CGK F  K  +  HMR HT ++P ++C  C +    +    KH+ +H  E+ 
Sbjct: 6   SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 349 HLCFVCGAGFVNDAGLKVHMRKH 371
             C +C     N + L VH+R H
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSH 87

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 202 THGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
           + G+    C  C K F  +  +K H R KH   KP+EC  C K    +  L EH  +  +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60
Query: 262 ---AQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHM 312
               Q F C +C +T       + HM  H+   P+ C+ C + F  K  +  HM
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 266 ECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTH--TRIRPTFE 323
           EC  CHK  +S+   K H   H+  KPF C  CGK +  K  +  H   +   R    F 
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 324 CDVCHQIFPTDFRTK-HMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRK 370
           C VC + F      + HM+ H  E  + C  C   F+    L+ HM K
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIF--PTDFRTKHMLVHDVEKS 348
           KP+ C  CGK F     +  H RTHT  +P ++C  C + F   +D + KH   H  EK 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKP-YKCPECGKSFSQSSDLQ-KHQRTHTGEKP 60
Query: 349 HLCFVCGAGFVNDAGLKVHMRKHQ 372
           + C  CG  F     L  H R HQ
Sbjct: 61  YKCPECGKSFSRSDHLSRHQRTHQ 84

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +      +  +H+ +H+  KPF C IC ++F    ++  H+RTHT  +P F CD+C +
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70
Query: 330 IFP-TDFRTKHMLVHDVEK 347
            F  +D R +H  +H  +K
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 235 KPYECYI--CNKILVSRGRLNEHLNQVHLAQR-FECKLCHKTIVSEKTFKKHMALHSDAK 291
           +PY C +  C++    +  L+ H+ ++H  Q+ F+C++C +         +H+  H+  K
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 292 PFVCNICGKDFKLKYYVNLHMRTHTR 317
           PF C+ICG+ F   +  + H + H R
Sbjct: 62  PFACDICGRKFATLHTRDRHTKIHLR 87

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +    +     H+ +H+  KPF C IC ++F     +N H+RTHT  +P F CD+C +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKP-FACDICGR 70
Query: 330 IFPT-DFRTKHMLVHDVEK 347
            F T   R +H  +H  +K
Sbjct: 71  KFATLHTRDRHTKIHLRQK 89

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +         +H+ +H+  KPF C IC ++F    ++  H+RTHT  +P F CD+C +
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70
Query: 330 IFP-TDFRTKHMLVHDVEK 347
            F  +D R +H  +H  +K
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +         +H+ +H+  KPF C IC ++F    ++  H+RTHT  +P F CD+C +
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70
Query: 330 IFP-TDFRTKHMLVHDVEK 347
            F  +D R +H  +H  +K
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +         +H+ +H+  KPF C IC ++F    ++  H+RTHT  +P F CD+C +
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70
Query: 330 IFP-TDFRTKHMLVHDVEK 347
            F  +D R +H  +H  +K
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +         +H+ +H+  KPF C IC ++F    ++  H+RTHT  +P F CD+C +
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70
Query: 330 IFP-TDFRTKHMLVHDVEK 347
            F  +D R +H  +H  +K
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +         +H+ +H+  KPF C IC ++F    ++  H+RTHT  +P F CD+C +
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 69
Query: 330 IFP-TDFRTKHMLVH 343
            F  +D R +H  +H
Sbjct: 70  KFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 270 CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQ 329
           C +         +H+ +H+  KPF C IC ++F    ++  H+RTHT  +P F CD+C +
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70
Query: 330 IFP-TDFRTKHMLVH 343
            F  +D R +H  +H
Sbjct: 71  KFARSDERKRHTKIH 85

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 85  CSY--CGKVLSRKDKLTRHIAAVHSGKEYPC--EQCDRKFTNGYKLKQHMLTHMQKDTSI 140
           CS+  CG   ++  KL  H+      K +PC  E C++ FT+ + L +H LTH  +    
Sbjct: 15  CSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE---- 70
Query: 141 SIDVISEIKKFKCDQ--CDYATKDKYNLGTHIKRRHTKEYSVLC---TQCGFGCYTNREL 195
                   K F CD   CD     K N+  H  R H  +  V       CG     + +L
Sbjct: 71  --------KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 196 EEHQILTHGAEPYHCKY--CDKTFTKRMNVKTHERMKHENHKPYEC 239
           + HQ       PY C +  CDK F+    +K HE++    H  Y C
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV----HAGYPC 164

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 242 CNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI--CG 299
           C K+      + +HL+  H  +   C  C K  V     K+H  +H+  KPF C    CG
Sbjct: 13  CTKMFRDNSAMRKHLH-THGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 300 KDFKLKYYVNLHMRTHTRIRPTFEC--DVCHQIFPTDFRTK-HMLVHDVEKS 348
           K F L + +  H+R HT  RP + C  D C++ F      K H+L H   K+
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRP-YVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 211 KYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLC 270
           K CD+TF+    + TH  M+H               V     N H+         EC   
Sbjct: 29  KSCDRTFSTMHELVTHVTMEH---------------VGGPEQNNHVCYWE-----ECPRE 68
Query: 271 HKTIVSEKTFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECDV-- 326
            K+  ++     H+ +H+  KPF C    CGK F     + +H RTHT  +P F+C+   
Sbjct: 69  GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEG 127
Query: 327 CHQIFP-TDFRTKHMLVHDVEKS 348
           C + F  +  R KHM VH  +KS
Sbjct: 128 CDRRFANSSDRKKHMHVHTSDKS 150

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 288 SDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHMLVHD-- 344
           S +    C ICGK F+  Y++N H  +H+  +P + C VC   F   D  + H+  HD  
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 345 VEKSHLCFVCGAGFVNDAGLKVHMRK 370
           V K ++C  CG GF     L  H+++
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQ 87

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 293 FVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHMLVHDVEKSHLC 351
           ++C +C + +     +  H   H+     + C  C ++FP  ++RTKH + H  E+ + C
Sbjct: 23  YICIVCKRSYVCLTSLRRHFNIHS-WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQC 81
Query: 352 FVCGAGFVNDAGLKVHMR 369
             CG  F+N   +  H++
Sbjct: 82  LACGKSFINYQFMSSHIK 99

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 30/120 (25%)
Query: 207 PYHCKY--CDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQR 264
           P+ C Y  C+K + K  +++ H R KH   KPY+C                         
Sbjct: 6   PFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQC------------------------- 39
Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
            + K C +        K+H   H+  KPF C  C + F    ++  H RTHT  +P F C
Sbjct: 40  -DFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP-FSC 97

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 288 SDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPT 321
           S  KP+ C+ CGK F+ K Y+ +HMRTHT  +P+
Sbjct: 6   SGVKPYGCSECGKAFRSKSYLIIHMRTHTGEKPS 39

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 263 QRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPT 321
           +R++C  C K+        KH   H+  KP+ C+ CGK F  + ++  H R HT   P+
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKH 339
           KPF C IC ++F    ++  H+RTHT  +P F CD+C + F  +D R +H
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERKRH 50

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	372
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-22
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-19
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-13
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	9e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 91.7 bits (229), Expect = 4e-22
 Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 19/186 (10%)

Query: 195 LEEHQILTH-GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLN 253
                     G +PY C  C K+F++  ++  H+R  H   KPY+C  C K    +  L 
Sbjct: 9   SVAQAA-LEPGEKPYACPECGKSFSRSDHLAEHQRT-HTGEKPYKCPECGKSFSDKKDLT 66

Query: 254 EHLNQVHLAQR-------FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKY 306
            H       QR       ++C  C K+       + H   H+  KP+ C  CGK F    
Sbjct: 67  RH-------QRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLA 119

Query: 307 YVNLHMRTHTRIRPTFECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLK 365
           ++  H RTHT  +P ++C  C + F  +     H   H  EK + C  CG  F     L 
Sbjct: 120 HLRAHQRTHTGEKP-YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALN 178

Query: 366 VHMRKH 371
           VH R H
Sbjct: 179 VHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 89.8 bits (224), Expect = 2e-21
 Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 18/176 (10%)

Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTH-GAEP 207
           K + C +C  +     +L  H +R HT E    C +CG      ++L  HQ  TH G +P
Sbjct: 20  KPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQR-THTGEKP 77

Query: 208 YHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQR--- 264
           Y C  C K+F++R N++ H+R  H   KPY C  C K       L  H       QR   
Sbjct: 78  YKCPECGKSFSQRANLRAHQRT-HTGEKPYACPECGKSFSQLAHLRAH-------QRTHT 129

Query: 265 ----FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
               ++C  C K+   E     H   H+  KP+ C  CGK F  +  +N+H RTHT
Sbjct: 130 GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT 185

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 84.4 bits (210), Expect = 2e-19
 Identities = 62/176 (35%), Positives = 82/176 (46%), Gaps = 18/176 (10%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSI 140
           P  C  CGK  SR D L  H    H+G K Y C +C + F++   L +H  TH  +    
Sbjct: 21  PYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGE---- 75

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQI 200
                   K +KC +C  +   + NL  H +R HT E    C +CG        L  HQ 
Sbjct: 76  --------KPYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQR 126

Query: 201 LTH-GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEH 255
            TH G +PY C  C K+F++  N+ TH+R  H   KPY+C  C K    R  LN H
Sbjct: 127 -THTGEKPYKCPECGKSFSREDNLHTHQRT-HTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 76.3 bits (189), Expect = 1e-16
 Identities = 62/208 (29%), Positives = 83/208 (39%), Gaps = 50/208 (24%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            CP CGK  SR   L  H R+ HT       G+                          P
Sbjct: 23  ACPECGKSFSRSDHLAEHQRT-HT-------GEK-------------------------P 49

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
            +C  CGK  S K  LTRH    H+G K Y C +C + F+    L+ H  TH  +     
Sbjct: 50  YKCPECGKSFSDKKDLTRH-QRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE----- 103

Query: 142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQIL 201
                  K + C +C  +     +L  H +R HT E    C +CG        L  HQ  
Sbjct: 104 -------KPYACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQR- 154

Query: 202 TH-GAEPYHCKYCDKTFTKRMNVKTHER 228
           TH G +PY C  C K+F++R  +  H+R
Sbjct: 155 THTGEKPYKCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 49.7 bits (120), Expect = 2e-07
 Identities = 40/156 (25%), Positives = 59/156 (37%), Gaps = 48/156 (30%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +CP CGK  S+++ L +H R+ HT       G+                          P
Sbjct: 79  KCPECGKSFSQRANLRAHQRT-HT-------GEK-------------------------P 105

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
             C  CGK  S+   L  H    H+G K Y C +C + F+    L  H  TH  +     
Sbjct: 106 YACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE----- 159

Query: 142 IDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
                  K +KC +C  +   +  L  H +R HT +
Sbjct: 160 -------KPYKCPECGKSFSRRDALNVH-QRTHTGK 187

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.5 bits (184), Expect = 1e-16
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 5/117 (4%)

Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEH--LNQVHL 261
           G+    C  C K F  +  +K H R  H   KP+EC  C K    +  L EH   N ++ 
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

Query: 262 AQR-FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHM-RTHT 316
           +++ F C +C +T       + HM  H+   P+ C+ C + F  K  +  HM + H+
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 68.3 bits (168), Expect = 2e-14
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%)

Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQ--ILTH-GA 205
              +C  C      KY L  H  R+HT E    C +CG   +    L EH+     +   
Sbjct: 6   SGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 206 EPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVH 260
           + + C  C +TF +RM ++ H    H    PY+C  C++  + +  L  H+ ++H
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVS-HTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.8 bits (151), Expect = 4e-12
 Identities = 37/160 (23%), Positives = 54/160 (33%), Gaps = 48/160 (30%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           ECP C K    K  L  H R  HT       G+                          P
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRK-HT-------GEK-------------------------P 35

Query: 83  VECSYCGKVLSRKDKLTRH--IAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTS 139
            EC  CGK   RK+ L  H     ++   + + C  C   F    +L+ HM++H  +   
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE--- 92

Query: 140 ISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYS 179
                      +KC  C      K +L +H+ + H+   S
Sbjct: 93  ---------MPYKCSSCSQQFMQKKDLQSHMIKLHSGPSS 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 59.4 bits (145), Expect = 2e-11
 Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 5/110 (4%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMR---THTRIRPT 321
            EC  CHK  +S+   K H   H+  KPF C  CGK +  K  +  H      +   +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV- 66

Query: 322 FECDVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRK 370
           F C VC + F        HM+ H  E  + C  C   F+    L+ HM K
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.1 bits (139), Expect = 2e-10
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFR-TKHM---LV 342
            S +    C  C K F  KYY+ +H R HT  +P FEC  C + +       +H     +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKP-FECPKCGKCYFRKENLLEHEARNCM 60

Query: 343 HDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
           +  E+   C VC   F     L++HM  H
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 12/123 (9%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSI 140
            VEC  C K    K  L  H    H+G K + C +C + +     L +H     +    +
Sbjct: 7   GVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEH-----EARNCM 60

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQI 200
           +    SE + F C  C    + +  L  H    HT E    C+ C       ++L+ H I
Sbjct: 61  N---RSE-QVFTCSVCQETFRRRMELRLH-MVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

Query: 201 LTH 203
             H
Sbjct: 116 KLH 118

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 30/193 (15%)

Query: 82  PVECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQ--CDRKFTNGYKLKQHMLTHMQK 136
              CS+  CG   ++  KL  H+   H+G K +PC++  C++ FT+ + L +H LTH  +
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

Query: 137 DTSISIDVISEIKKFKCDQ--CDYATKDKYNLGTHIKRRHTKE----YSVLCTQCGFGCY 190
                       K F CD   CD     K N+  H   R        Y      CG    
Sbjct: 71  ------------KNFTCDSDGCDLRFTTKANMKKH-FNRFHNIKICVYVCHFENCGKAFK 117

Query: 191 TNRELEEHQILTH-GAEPYHCK--YCDKTFTKRMNVKTHERMKHENHKPYECYICNKILV 247
            + +L+ HQ  +H    PY C    CDK F+    +K HE++ H  +   +   C+ +  
Sbjct: 118 KHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAGYPCKKDDSCSFVGK 175

Query: 248 SRGRLNEHLNQVH 260
           +     +H+ + H
Sbjct: 176 TWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 45/196 (22%), Positives = 67/196 (34%), Gaps = 30/196 (15%)

Query: 198 HQILTHGAEPYHCKY--CDKTFTKRMNVKTHERMKHENHKPYEC--YICNKILVSRGRLN 253
            + L    + Y C +  C   + K   ++ H    H   KP+ C    C K   S   L 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK-HTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 254 EHLNQVHLAQR-------FECK--LCHKTIVSEKTFKKHMALHSDAK--PFVCNI--CGK 300
            H                F C    C     ++   KKH     + K   +VC+   CGK
Sbjct: 62  RH-------SLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK 114

Query: 301 DFKLKYYVNLHMRTHTRIRPTFEC--DVCHQIFPTDFR-TKHMLVHDVEKSHLCFVCGAG 357
            FK    + +H  +HT+  P +EC  + C + F    R  +H  VH          C   
Sbjct: 115 AFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFV 173

Query: 358 FVNDAGLKVHMRK-HQ 372
                    H+ + HQ
Sbjct: 174 GKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 51.8 bits (125), Expect = 4e-08
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 282 KHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECD--VCHQIFPTDFR- 336
              AL    K ++C+   CG  +   + +  H+  HT  +P F C    C + F +    
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKP-FPCKEEGCEKGFTSLHHL 60

Query: 337 TKHMLVHDVEKSHLC--FVCGAGFVNDAGLKVHMRKH 371
           T+H L H  EK+  C    C   F   A +K H  + 
Sbjct: 61  TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 69.5 bits (171), Expect = 1e-14
 Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 34/175 (19%)

Query: 207 PYHCKYCDKTFTKRMNVKTHERMK--HENHKPYECYICNKILVSRGRLNEHLNQVHLAQR 264
                 C + F  +  +  H   +  H   K + C+                        
Sbjct: 3   DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG--------------------- 41

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTF 322
             C    +   ++     HM  H+  KP  C    C K +     +  H+R+HT  +P +
Sbjct: 42  --CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP-Y 98

Query: 323 EC--DVCHQIFPT-DFRTKHML-VHDVEKSHLCFV--CGAGFVNDAGLKVHMRKH 371
            C  + C + F     R KH    H  EK ++C +  C   + + + L+ H++  
Sbjct: 99  MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 67.6 bits (166), Expect = 8e-14
 Identities = 45/218 (20%), Positives = 76/218 (34%), Gaps = 75/218 (34%)

Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDK----- 163
            +   + C ++F +  +L  H+ +           +  E K+F C     + + +     
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEH---------IHGERKEFVCHWGGCSRELRPFKAQ 52

Query: 164 YNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKY--CDKTFTKRM 221
           Y L  H+ RRHT E                            +P+ C +  C K++++  
Sbjct: 53  YMLVVHM-RRHTGE----------------------------KPHKCTFEGCRKSYSRLE 83

Query: 222 NVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFK 281
           N+KTH R  H   KPY C                          E + C K   +     
Sbjct: 84  NLKTHLRS-HTGEKPYMC--------------------------EHEGCSKAFSNASDRA 116

Query: 282 KHMA-LHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHT 316
           KH    HS+ KP+VC +  C K +     +  H++T  
Sbjct: 117 KHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 64.9 bits (159), Expect = 7e-13
 Identities = 41/162 (25%), Positives = 59/162 (36%), Gaps = 28/162 (17%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAA--VHSG-KEYPCEQCD-----RKFTNGYKLKQHMLTH 133
                 C +    +++L  HI +  +H   KE+ C         R F   Y L  HM  H
Sbjct: 3   DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH 62

Query: 134 MQKDTSISIDVISEIKKFKCD--QCDYATKDKYNLGTHIKRRHTKEYSVLCTQ--CGFGC 189
                       +  K  KC    C  +     NL TH  R HT E   +C    C    
Sbjct: 63  ------------TGEKPHKCTFEGCRKSYSRLENLKTH-LRSHTGEKPYMCEHEGCSKAF 109

Query: 190 YTNRELEEHQILTH-GAEPYHCKY--CDKTFTKRMNVKTHER 228
               +  +HQ  TH   +PY CK   C K +T   +++ H +
Sbjct: 110 SNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 49.9 bits (120), Expect = 9e-08
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 36/145 (24%)

Query: 235 KPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFV 294
                  C++   S+ +L  H+N  H+                         H + K FV
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHI-------------------------HGERKEFV 36

Query: 295 CNICG-----KDFKLKYYVNLHMRTHTRIRPTFECDV--CHQIFPT-DFRTKHMLVHDVE 346
           C+  G     + FK +Y + +HMR HT  +P  +C    C + +   +    H+  H  E
Sbjct: 37  CHWGGCSRELRPFKAQYMLVVHMRRHTGEKP-HKCTFEGCRKSYSRLENLKTHLRSHTGE 95

Query: 347 KSHLC--FVCGAGFVNDAGLKVHMR 369
           K ++C    C   F N +    H  
Sbjct: 96  KPYMCEHEGCSKAFSNASDRAKHQN 120

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 42.2 bits (100), Expect = 4e-05
 Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 40/118 (33%)

Query: 23  ECPV--CGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSR 80
           +C    C K  SR   L +H+RS HT       G+                         
Sbjct: 69  KCTFEGCRKSYSRLENLKTHLRS-HT-------GEK------------------------ 96

Query: 81  APVECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCE--QCDRKFTNGYKLKQHMLTH 133
            P  C +  C K  S      +H    HS  K Y C+   C +++T+   L++H+ T 
Sbjct: 97  -PYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 31/124 (25%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVH 260
           + G+  P+ C+ C K F+++  +KTH R  H   KPY+C  C+        LN+H     
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKH----- 55

Query: 261 LAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
              R                     +HSD +PF C IC    +    + +H+R+HT    
Sbjct: 56  --LR---------------------IHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG 92

Query: 321 TFEC 324
               
Sbjct: 93  -PSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 57.8 bits (141), Expect = 4e-11
 Identities = 20/93 (21%), Positives = 28/93 (30%), Gaps = 6/93 (6%)

Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCG--FGCYTNRELEEHQILTHGAE 206
              KC+ C      K  L TH  R HT      C  C       ++  L +H  +     
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSS--LNKHLRIHSDER 63

Query: 207 PYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
           P+ C+ C         +  H R  H        
Sbjct: 64  PFKCQICPYASRNSSQLTVHLRS-HTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 56.3 bits (137), Expect = 2e-10
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 15/97 (15%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSI 140
           P +C  CGK  SRKDKL  H+   H+G K Y C+ CD    +   L +H+  H       
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIH------- 59

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
                S+ + FKC  C YA+++   L  H  R HT +
Sbjct: 60  -----SDERPFKCQICPYASRNSSQLTVH-LRSHTGD 90

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 56.3 bits (137), Expect = 2e-10
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHMLVHDV 345
              + P  C +CGK F  K  +  HMR HT ++P ++C  C      +    KH+ +H  
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 346 EKSHLCFVCGAGFVNDAGLKVHMRKH 371
           E+   C +C     N + L VH+R H
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 50.1 bits (121), Expect = 3e-08
 Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 35/112 (31%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +C VCGK  SRK KL +HMR  HT       G                           P
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRC-HT-------GVK-------------------------P 36

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
            +C  C    +    L +H+  +HS  + + C+ C     N  +L  H+ +H
Sbjct: 37  YKCKTCDYAAADSSSLNKHL-RIHSDERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 5/84 (5%)

Query: 174 HTKEYSVLCTQCG--FGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKH 231
                   C  CG  F       L+ H     G +PY CK CD       ++  H R+ H
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDK--LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-H 59

Query: 232 ENHKPYECYICNKILVSRGRLNEH 255
            + +P++C IC     +  +L  H
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVH 83

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 65.8 bits (161), Expect = 3e-13
 Identities = 40/159 (25%), Positives = 60/159 (37%), Gaps = 26/159 (16%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLN 257
            + +         K CD+TF+    + TH         P +                   
Sbjct: 16  CKWIDEAQLSRPKKSCDRTFSTMHELVTHVT-MEHVGGPEQNN----------------- 57

Query: 258 QVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTH 315
             H+    EC    K+  ++     H+ +H+  KPF C    CGK F     + +H RTH
Sbjct: 58  --HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

Query: 316 TRIRPTFECDV--CHQIFPT-DFRTKHMLVHDVEKSHLC 351
           T  +P F+C+   C + F     R KHM VH  +KS   
Sbjct: 116 TGEKP-FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 62.7 bits (153), Expect = 3e-12
 Identities = 33/166 (19%), Positives = 44/166 (26%), Gaps = 39/166 (23%)

Query: 171 KRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYH---------CKYCDKTFTKRM 221
           K     + S     C     T  EL  H  + H   P           C    K+F  + 
Sbjct: 17  KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 222 NVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFK 281
            +  H R+ H   KP+ C                              C K     +  K
Sbjct: 77  KLVNHIRV-HTGEKPFPCPFPG--------------------------CGKIFARSENLK 109

Query: 282 KHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECD 325
            H   H+  KPF C    C + F        HM  HT  +      
Sbjct: 110 IHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS-GPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 34/171 (19%), Positives = 49/171 (28%), Gaps = 55/171 (32%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSGKEY---------PCEQCDRKFTNGYKLKQHMLT 132
                 C +  S   +L  H+   H G             C +  + F   YKL  H+  
Sbjct: 25  SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84

Query: 133 HMQKDTSISIDVISEIKKFKCD--QCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCY 190
           H  +            K F C    C        NL  H KR HT E             
Sbjct: 85  HTGE------------KPFPCPFPGCGKIFARSENLKIH-KRTHTGE------------- 118

Query: 191 TNRELEEHQILTHGAEPYHCKY--CDKTFTKRMNVKTHERMKHENHKPYEC 239
                          +P+ C++  CD+ F    + K H  + H + K    
Sbjct: 119 ---------------KPFKCEFEGCDRRFANSSDRKKHMHV-HTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 29/114 (25%), Positives = 37/114 (32%), Gaps = 28/114 (24%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
               C +  S   +LV+H+        PE                       +       
Sbjct: 27  PKKSCDRTFSTMHELVTHVTM-EHVGGPE-----------------------QNNHVCYW 62

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPC--EQCDRKFTNGYKLKQHMLTH 133
            EC   GK    K KL  HI  VH+G K +PC    C + F     LK H  TH
Sbjct: 63  EECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 11/100 (11%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP--------TFECDVCHQIFPTD 334
              +           C + F   + +  H+       P          EC    + F   
Sbjct: 16  CKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAK 75

Query: 335 FR-TKHMLVHDVEKSHLCFV--CGAGFVNDAGLKVHMRKH 371
           ++   H+ VH  EK   C    CG  F     LK+H R H
Sbjct: 76  YKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 36/116 (31%), Positives = 47/116 (40%), Gaps = 39/116 (33%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           ECP  GK    K KLV+H+R  HT       G+                          P
Sbjct: 64  ECPREGKSFKAKYKLVNHIRV-HT-------GEK-------------------------P 90

Query: 83  VECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPC--EQCDRKFTNGYKLKQHMLTH 133
             C +  CGK+ +R + L  H    H+G K + C  E CDR+F N    K+HM  H
Sbjct: 91  FPCPFPGCGKIFARSENLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 63.6 bits (156), Expect = 6e-13
 Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 30/130 (23%)

Query: 195 LEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNE 254
               ++ +   + + CK+C + FTK  N+  HER  H + +PY C IC+K    +  L +
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERT-HTDERPYTCDICHKAFRRQDHLRD 63

Query: 255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRT 314
           H       +                      +HS  KPF C  CGK F     + +H   
Sbjct: 64  H-------RY---------------------IHSKEKPFKCQECGKGFCQSRTLAVHKTL 95

Query: 315 HTRIRPTFEC 324
           H +       
Sbjct: 96  HMQTSS-PTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 58.2 bits (142), Expect = 5e-11
 Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHM 340
                    K F+C  CG+ F   Y + +H RTHT  RP + CD+CH+ F   D    H 
Sbjct: 7   GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP-YTCDICHKAFRRQDHLRDHR 65

Query: 341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
            +H  EK   C  CG GF     L VH   H
Sbjct: 66  YIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 51.7 bits (125), Expect = 8e-09
 Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 44/143 (30%)

Query: 98  LTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQC 156
            +          KE+ C+ C R FT  Y L  H  TH  +            + + CD C
Sbjct: 5   SSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE------------RPYTCDIC 51

Query: 157 DYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKT 216
             A + + +L  H +  H+KE                            +P+ C+ C K 
Sbjct: 52  HKAFRRQDHLRDH-RYIHSKE----------------------------KPFKCQECGKG 82

Query: 217 FTKRMNVKTHERMKHENHKPYEC 239
           F +   +  H+ + H        
Sbjct: 83  FCQSRTLAVHKTL-HMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 46.7 bits (112), Expect = 5e-07
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 15/97 (15%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSI 140
              C +CG+  ++   L  H    H+  + Y C+ C + F     L+ H   H       
Sbjct: 17  EFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDHRYIH------- 68

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
                S+ K FKC +C         L  H K  H + 
Sbjct: 69  -----SKEKPFKCQECGKGFCQSRTLAVH-KTLHMQT 99

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 45.1 bits (108), Expect = 2e-06
 Identities = 26/113 (23%), Positives = 37/113 (32%), Gaps = 35/113 (30%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            C  CG+  ++   L+ H R  HT        +                          P
Sbjct: 19  ICKFCGRHFTKSYNLLIHER-THT-------DER-------------------------P 45

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHM 134
             C  C K   R+D L  H   +HS  K + C++C + F     L  H   HM
Sbjct: 46  YTCDICHKAFRRQDHLRDH-RYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 60.6 bits (148), Expect = 9e-12
 Identities = 37/167 (22%), Positives = 52/167 (31%), Gaps = 55/167 (32%)

Query: 207 PYHCKY--CDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQR 264
           P+ C Y  C+K + K  +++ H R  H   KPY+C                         
Sbjct: 6   PFMCAYPGCNKRYFKLSHLQMHSRK-HTGEKPYQC------------------------- 39

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
            + K C +        K+H   H+  KPF C  C + F    ++  H RTHT  +P F C
Sbjct: 40  -DFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP-FSC 97

Query: 325 DVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
                                        C   F     L  H   H
Sbjct: 98  RWPS-------------------------CQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 49.1 bits (118), Expect = 9e-08
 Identities = 37/155 (23%), Positives = 56/155 (36%), Gaps = 49/155 (31%)

Query: 82  PVECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCE--QCDRKFTNGYKLKQHMLTHMQK 136
           P  C+Y  C K   +   L  H    H+G K Y C+   C+R+F+   +LK+H   H   
Sbjct: 6   PFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH--- 61

Query: 137 DTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELE 196
                    + +K F+C  C        +L TH  R HT                     
Sbjct: 62  ---------TGVKPFQCKTCQRKFSRSDHLKTH-TRTHT--------------------- 90

Query: 197 EHQILTHGAEPYHCKY--CDKTFTKRMNVKTHERM 229
                  G +P+ C++  C K F +   +  H  M
Sbjct: 91  -------GEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 37/112 (33%)

Query: 25  PVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVE 84
           P C K   + S L  H R  HT       G+                          P +
Sbjct: 12  PGCNKRYFKLSHLQMHSRK-HT-------GEK-------------------------PYQ 38

Query: 85  CSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
           C +  C +  SR D+L RH    H+G K + C+ C RKF+    LK H  TH
Sbjct: 39  CDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 27/114 (23%), Positives = 37/114 (32%), Gaps = 37/114 (32%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +   C +  SR  +L  H R  HT       G                           P
Sbjct: 40  DFKDCERRFSRSDQLKRHQRR-HT-------GVK-------------------------P 66

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCE--QCDRKFTNGYKLKQHMLTH 133
            +C  C +  SR D L  H    H+G K + C    C +KF    +L +H   H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 59.1 bits (144), Expect = 3e-11
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 34/149 (22%)

Query: 176 KEYSVLCTQCG--FGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHEN 233
           +  +     C   F   +   + +H   THG   + C  C K F +   +K H+ + H  
Sbjct: 4   RTIACPHKGCTKMFRDNSA--MRKHLH-THGPRVHVCAECGKAFVESSKLKRHQLV-HTG 59

Query: 234 HKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPF 293
            KP++C                            + C K    +   + H+ +H+  +P+
Sbjct: 60  EKPFQC--------------------------TFEGCGKRFSLDFNLRTHVRIHTGDRPY 93

Query: 294 VCNI--CGKDFKLKYYVNLHMRTHTRIRP 320
           VC    C K F     +  H+ TH + + 
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTHAKAKN 122

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 57.1 bits (139), Expect = 2e-10
 Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 265 FEC--KLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTF 322
             C  K C K        +KH+  H   +  VC  CGK F     +  H   HT  +P F
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKP-F 63

Query: 323 ECDV--CHQIFPTDFR-TKHMLVHDVEKSHLCFV--CGAGFVNDAGLKVHMRKH 371
           +C    C + F  DF    H+ +H  ++ ++C    C   F     LK H+  H
Sbjct: 64  QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 50.6 bits (122), Expect = 3e-08
 Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 49/163 (30%)

Query: 82  PVECSY--CGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTS 139
            + C +  C K+      + +H+   H  + + C +C + F    KLK+H L H  +   
Sbjct: 5   TIACPHKGCTKMFRDNSAMRKHLH-THGPRVHVCAECGKAFVESSKLKRHQLVHTGE--- 60

Query: 140 ISIDVISEIKKFKC--DQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEE 197
                    K F+C  + C       +NL TH  R HT +                    
Sbjct: 61  ---------KPFQCTFEGCGKRFSLDFNLRTH-VRIHTGD-------------------- 90

Query: 198 HQILTHGAEPYHCKY--CDKTFTKRMNVKTHERMKHENHKPYE 238
                    PY C +  C+K F +  N+K+H    H   K  +
Sbjct: 91  --------RPYVCPFDGCNKKFAQSTNLKSHILT-HAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.3 bits (98), Expect = 5e-05
 Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 39/116 (33%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            C  CGK     SKL  H    HT       G+                          P
Sbjct: 36  VCAECGKAFVESSKLKRHQLV-HT-------GEK-------------------------P 62

Query: 83  VECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPC--EQCDRKFTNGYKLKQHMLTH 133
            +C++  CGK  S    L  H+  +H+G + Y C  + C++KF     LK H+LTH
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.3 bits (98), Expect = 6e-05
 Identities = 38/173 (21%), Positives = 58/173 (33%), Gaps = 60/173 (34%)

Query: 12  IEPKPSKYIKVECPV--CGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTM 69
           +EP+      + CP   C K+    S +  H+                 T G        
Sbjct: 1   MEPRT-----IACPHKGCTKMFRDNSAMRKHLH----------------THG-------- 31

Query: 70  LMLDHKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPC--EQCDRKFTNGYKL 126
                  P+      C+ CGK      KL RH   VH+G K + C  E C ++F+  + L
Sbjct: 32  -------PR---VHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNL 80

Query: 127 KQHMLTHMQKDTSISIDVISEIKKFKC--DQCDYATKDKYNLGTHIKRRHTKE 177
           + H+  H               + + C  D C+       NL +H    H K 
Sbjct: 81  RTHVRIHTGD------------RPYVCPFDGCNKKFAQSTNLKSH-ILTHAKA 120

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 17/99 (17%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSI 140
           P +C  C +  SR D LT HI   H+G K + C+ C RKF    + K+H           
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQH------ 55

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIK--RRHTKE 177
                  I     D+ +      Y+L   +   ++   E
Sbjct: 56  -------ILPILEDKVEELLSKNYHLENEVARLKKLVGE 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 17/113 (15%), Positives = 35/113 (30%), Gaps = 33/113 (29%)

Query: 207 PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFE 266
           P+ C+ C + F++  ++ TH R  H   KP+ C IC +                      
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDER-------------- 47

Query: 267 CKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYV---NLHMRTHT 316
                         K+H  +     P + +   +     Y++      ++   
Sbjct: 48  --------------KRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKKLV 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHMLVHDVEKSH 349
           KPF C IC ++F    ++  H+RTHT  +P F CD+C + F  +D R +H  +       
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERKRHRDIQ-HILPI 59

Query: 350 LCFVCGAGFVNDAGLKVH---MRKH 371
           L          +  L+     ++K 
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 34/108 (31%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +C +C +  SR   L +H+R+ HT       G+                          P
Sbjct: 5   QCRICMRNFSRSDHLTTHIRT-HT-------GEK-------------------------P 31

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHM 130
             C  CG+  +R D+  RH   +        ++ +   +  Y L+  +
Sbjct: 32  FACDICGRKFARSDERKRHR-DIQHILPILEDKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 148 IKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCG--FGCYTNRELEEHQILTHGA 205
           +K F+C  C        +L TH  R HT E    C  CG  F        + H+      
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDE--RKRHRD-IQHI 56

Query: 206 EPYHCKYCDKTFTKRMNVKTHER 228
            P      ++  +K  +++    
Sbjct: 57  LPILEDKVEELLSKNYHLENEVA 79

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.2 bits (134), Expect = 3e-10
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 195 LEEHQILTH-GAEPYHCKYCDKTFTKRMNVKTHERMKH-ENHKPYECYICNKILVSRGRL 252
                  TH G +PY C  C   FT+   +K H   KH EN   + C  C+ ++  +  L
Sbjct: 3   SGSSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 253 NEHLNQVH 260
             HL + H
Sbjct: 62  GVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 12/82 (14%)

Query: 97  KLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQ 155
                    HSG K Y C  C  +FT    +K H+L    +           + KF C  
Sbjct: 2   SSGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTE----------NVAKFHCPH 50

Query: 156 CDYATKDKYNLGTHIKRRHTKE 177
           CD     K +LG H++++H+  
Sbjct: 51  CDTVIARKSDLGVHLRKQHSYS 72

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 16/93 (17%), Positives = 24/93 (25%), Gaps = 26/93 (27%)

Query: 279 TFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTK 338
           +       HS  KP+ C IC   F     + +H+                          
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH---------------------- 39

Query: 339 HMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
                +      C  C       + L VH+RK 
Sbjct: 40  ----TENVAKFHCPHCDTVIARKSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 165 NLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAE--PYHCKYCDKTFTKRMN 222
           + G+   R H+ E    C  C      +  ++ H +  H      +HC +CD    ++ +
Sbjct: 2   SSGSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 223 VKTHERMKHENHKPY 237
           +  H R +H    P 
Sbjct: 61  LGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 4/55 (7%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG---KEYPCEQCDRKFTNGYKLKQHMLTH 133
           P EC  C    ++   +  HI          ++ C  CD        L  H+   
Sbjct: 15  PYECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 31/86 (36%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           EC +C    ++   +  H+     +                              ++ A 
Sbjct: 17  ECYICHARFTQSGTMKMHILQ-KHT------------------------------ENVAK 45

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG 108
             C +C  V++RK  L  H+   HS 
Sbjct: 46  FHCPHCDTVIARKSDLGVHLRKQHSY 71

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 54.8 bits (133), Expect = 5e-10
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 174 HTKEYSVLCTQCG--FGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKH 231
            +    V C  CG  F    +  L  H++   G +PY C  C   F ++  +  H R  H
Sbjct: 2   SSGSSGVACEICGKIFRDVYH--LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-H 58

Query: 232 --ENHKPYECYICNKILVSRGRLNEHLNQVH 260
                KPY C  C K       LN H+ QVH
Sbjct: 59  DGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 54.0 bits (131), Expect = 9e-10
 Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 12/97 (12%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSI 140
            V C  CGK+      L RH    HSG K Y C  C  +F    ++  H+ +H       
Sbjct: 7   GVACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH----DG- 60

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
                S  K + C  C        +L  HIK+ H+  
Sbjct: 61  -----SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFR-TKHMLVHDV 345
            S +    C ICGK F+  Y++N H  +H+  +P + C VC   F    R + H+  HD 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 346 E--KSHLCFVCGAGFVNDAGLKVHMRK 370
              K ++C  CG GF     L  H+++
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT--RIRPTF 322
             C++C K         +H   HS  KP+ C +CG  FK K  ++ H+R+H     +P +
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-Y 66

Query: 323 ECDVC 327
            C  C
Sbjct: 67  ICQSC 71

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 28/127 (22%), Positives = 41/127 (32%), Gaps = 40/127 (31%)

Query: 106 HSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKY 164
            SG     CE C + F + Y L +H L+H            S  K + C  C    K K 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSH------------SGEKPYSCPVCGLRFKRKD 49

Query: 165 NLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVK 224
            +  H  R H                               +PY C+ C K F++  ++ 
Sbjct: 50  RMSYH-VRSHDGS--------------------------VGKPYICQSCGKGFSRPDHLN 82

Query: 225 THERMKH 231
            H +  H
Sbjct: 83  GHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 43.2 bits (103), Expect = 7e-06
 Identities = 26/111 (23%), Positives = 38/111 (34%), Gaps = 37/111 (33%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            C +CGK+      L  H  S H+       G+                          P
Sbjct: 9   ACEICGKIFRDVYHLNRHKLS-HS-------GEK-------------------------P 35

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG---KEYPCEQCDRKFTNGYKLKQHM 130
             C  CG    RKD+++ H+   H G   K Y C+ C + F+    L  H+
Sbjct: 36  YSCPVCGLRFKRKDRMSYHV-RSHDGSVGKPYICQSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 31/86 (36%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            CPVCG    RK ++  H+RS H                                    P
Sbjct: 37  SCPVCGLRFKRKDRMSYHVRS-HDG------------------------------SVGKP 65

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG 108
             C  CGK  SR D L  HI  VHSG
Sbjct: 66  YICQSCGKGFSRPDHLNGHIKQVHSG 91

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.4 bits (132), Expect = 7e-10
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 291 KPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHMLVHDVEK 347
           +P+ C +  C + F     +  H+R HT  +P F+C +C + F  +D  T H+  H  EK
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 348 SHLCFVCGAGFVNDAGLKVHMRKH 371
              C +CG  F      K H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 281 KKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKH 339
            +H+ +H+  KPF C IC ++F    ++  H+RTHT  +P F CD+C + F  +D R +H
Sbjct: 23  TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERKRH 81

Query: 340 MLVHDVEK 347
             +H  +K
Sbjct: 82  TKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.4 bits (119), Expect = 5e-08
 Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 37/114 (32%)

Query: 23  ECPV--CGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSR 80
            CPV  C +  S+   L  H+R  HT                            K     
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRI-HTG--------------------------QK----- 33

Query: 81  APVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
            P +C  C +  SR D LT HI   H+G K + C+ C RKF    + K+H   H
Sbjct: 34  -PFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 48.2 bits (116), Expect = 1e-07
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 17/99 (17%)

Query: 82  PVECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDT 138
           P  C    C +  S+   LTRHI  +H+G K + C  C R F+    L  H+ TH  +  
Sbjct: 4   PYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE-- 60

Query: 139 SISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
                     K F CD C            H  + H ++
Sbjct: 61  ----------KPFACDICGRKFARSDERKRH-TKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 176 KEYSVLCTQCGFGCYTNRELEEHQILTH-GAEPYHCKYCDKTFTKRMNVKTHERMKHENH 234
           + Y+     C      +  L  H    H G +P+ C+ C + F++  ++ TH R  H   
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGE 60

Query: 235 KPYECYICNKILVSRGRLNEH 255
           KP+ C IC +          H
Sbjct: 61  KPFACDICGRKFARSDERKRH 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 40.5 bits (96), Expect = 5e-05
 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 9/85 (10%)

Query: 149 KKFKC--DQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCG--FGCYTNRELEEHQILTH- 203
           + + C  + CD       +L  H  R HT +    C  C   F    +  L  H   TH 
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDH--LTTHIR-THT 58

Query: 204 GAEPYHCKYCDKTFTKRMNVKTHER 228
           G +P+ C  C + F +    K H +
Sbjct: 59  GEKPFACDICGRKFARSDERKRHTK 83

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
           + C+ C K+   +    +HM++H   +P+ C +CGK FK+K+++  HM+ HT I+P +EC
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-YEC 68

Query: 325 DVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGL 364
           ++C + F     + H  V    KS+            +G 
Sbjct: 69  NICAKRF-MWRDSFHRHVTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 50.5 bits (122), Expect = 3e-08
 Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 32/131 (24%)

Query: 172 RRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKH 231
              + +    C QCG       + + H  +  G  PY C  C K F  + ++  H ++ H
Sbjct: 3   SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-H 60

Query: 232 ENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAK 291
              KPYEC IC K  + R   + H                              + S  K
Sbjct: 61  TGIKPYECNICAKRFMWRDSFHRH------------------------------VTSCTK 90

Query: 292 PFVCNICGKDF 302
            +      ++ 
Sbjct: 91  SYEAAKAEQNT 101

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 47.4 bits (114), Expect = 3e-07
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 18/106 (16%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSI 140
              C  CGK  + K +  RH++ +H G + Y C  C +KF   + L  HM  H       
Sbjct: 10  LYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH------- 60

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCG 186
                + IK ++C+ C      + +   H+    +   S    +  
Sbjct: 61  -----TGIKPYECNICAKRFMWRDSFHRHV---TSCTKSYEAAKAE 98

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 25/100 (25%), Positives = 32/100 (32%), Gaps = 37/100 (37%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            C VCGK    K  LV HM+  HT       G                           P
Sbjct: 39  GCGVCGKKFKMKHHLVGHMKI-HT-------GIK-------------------------P 65

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFT 121
            EC+ C K    +D   RH+    S  K Y   + ++  T
Sbjct: 66  YECNICAKRFMWRDSFHRHV---TSCTKSYEAAKAEQNTT 102

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 41.3 bits (98), Expect = 5e-05
 Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 49/141 (34%)

Query: 27  CGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECS 86
           CGK  + KS+   HM   H        G                           P  C 
Sbjct: 15  CGKSFTHKSQRDRHMS-MHL-------GLR-------------------------PYGCG 41

Query: 87  YCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVI 145
            CGK    K  L  H+  +H+G K Y C  C ++F       +H+ +             
Sbjct: 42  VCGKKFKMKHHLVGHM-KIHTGIKPYECNICAKRFMWRDSFHRHVTSCT----------- 89

Query: 146 SEIKKFKCDQCDYATKDKYNL 166
              K ++  + +  T +    
Sbjct: 90  ---KSYEAAKAEQNTTEASGP 107

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.0 bits (125), Expect = 4e-09
 Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 3/66 (4%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDA---KPFVCNICGKDFKLKYYVNLHMRTHTRIRPT 321
            +C++C  T   + +   H   H++      F C  CGK F+    V  H          
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 322 FECDVC 327
              +  
Sbjct: 68  APQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 6e-09
 Identities = 16/85 (18%), Positives = 20/85 (23%), Gaps = 25/85 (29%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVE 346
            S +    C ICG   + K  +N H R H                               
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVA-------------------------A 36

Query: 347 KSHLCFVCGAGFVNDAGLKVHMRKH 371
               C  CG  F     +  H  K 
Sbjct: 37  LRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.9 bits (122), Expect = 1e-08
 Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 26/94 (27%)

Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPY 208
              +C+ C +  + K +L  H +R+H +                            A  +
Sbjct: 6   SGLQCEICGFTCRQKASLNWH-QRKHAETV-------------------------AALRF 39

Query: 209 HCKYCDKTFTKRMNVKTHERMKHENHKPYECYIC 242
            C++C K F K  +V  H    H           
Sbjct: 40  PCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 10/82 (12%)

Query: 106 HSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKY 164
            SG     CE C         L  H   H +   +          +F C+ C    +   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAA---------LRFPCEFCGKRFEKPD 52

Query: 165 NLGTHIKRRHTKEYSVLCTQCG 186
           ++  H  + H           G
Sbjct: 53  SVAAHRSKSHPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERM--KHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
           G+    C+ C  T  ++ ++  H+R   +      + C  C K       +  H ++ H 
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63

Query: 262 AQRFECK 268
           A     +
Sbjct: 64  ALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 82  PVECSYCGKVLSRKDKLTRHI---AAVHSGKEYPCEQCDRKFTNGYKLKQHMLTH 133
            ++C  CG    +K  L  H    A   +   +PCE C ++F     +  H    
Sbjct: 7   GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.2 bits (102), Expect = 5e-06
 Identities = 15/97 (15%), Positives = 25/97 (25%), Gaps = 30/97 (30%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +C +CG    +K+ L  H R  H                                     
Sbjct: 9   QCEICGFTCRQKASLNWHQRK-HAETVAAL-----------------------------R 38

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRK 119
             C +CGK   + D +  H +  H       ++    
Sbjct: 39  FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGP 75

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.0 bits (86), Expect = 8e-04
 Identities = 13/71 (18%), Positives = 18/71 (25%), Gaps = 5/71 (7%)

Query: 234 HKPYECYICNKILVSRGRLNEHLNQVHLAQR----FECKLCHKTIVSEKTFKKHMALHSD 289
               +C IC      +  LN H    H        F C+ C K      +   H +    
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63

Query: 290 AKPFVCNICGK 300
           A          
Sbjct: 64  ALLLAPQESSG 74

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 52.0 bits (126), Expect = 4e-09
 Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 29/109 (26%)

Query: 208 YHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFEC 267
           + CK C K+F +   + TH  + H + +PY C  C K    +  + +H            
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLI-HSDTRPYPCQYCGKRFHQKSDMKKH-------TF--- 50

Query: 268 KLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
                             +H+  KP  C +CGK F     +  H R HT
Sbjct: 51  ------------------IHTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 49.7 bits (120), Expect = 3e-08
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
           F+CK+C K+     T   H+ +HSD +P+ C  CGK F  K  +  H   HT  +P  +C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP-HKC 60

Query: 325 DVC 327
            VC
Sbjct: 61  QVC 63

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 48.2 bits (116), Expect = 8e-08
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 182 CTQCG--FGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
           C  CG  F   +   L  H ++     PY C+YC K F ++ ++K H  + H   KP++C
Sbjct: 4   CKICGKSFKRSST--LSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI-HTGEKPHKC 60

Query: 240 YICNKILVSRGRLNEH 255
            +C K       L  H
Sbjct: 61  QVCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 47.4 bits (114), Expect = 1e-07
 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 293 FVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIF-PTDFRTKHMLVHDVEKSHLC 351
           F C ICGK FK    ++ H+  H+  RP + C  C + F       KH  +H  EK H C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRP-YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 352 FVCGAGFVNDAGLKVHMRKH 371
            VCG  F   + L  H RKH
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.9 bits (110), Expect = 6e-07
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 151 FKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCG--FGCYTNRELEEHQILTHGAEPY 208
           F C  C  + K    L TH    H+      C  CG  F   ++  +++H  +  G +P+
Sbjct: 2   FDCKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSD--MKKHTFIHTGEKPH 58

Query: 209 HCKYCDKTFTKRMNVKTHERM 229
            C+ C K F++  N+ TH R 
Sbjct: 59  KCQVCGKAFSQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.9 bits (110), Expect = 6e-07
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 15/93 (16%)

Query: 84  ECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISI 142
           +C  CGK   R   L+ H+  +HS  + YPC+ C ++F     +K+H   H         
Sbjct: 3   DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIH--------- 52

Query: 143 DVISEIKKFKCDQCDYATKDKYNLGTHIKRRHT 175
              +  K  KC  C  A     NL TH  R+HT
Sbjct: 53  ---TGEKPHKCQVCGKAFSQSSNLITH-SRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.5 bits (109), Expect = 7e-07
 Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 35/112 (31%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +C +CGK   R S L +H+   H+                                   P
Sbjct: 3   DCKICGKSFKRSSTLSTHLL-IHS-------DTR-------------------------P 29

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
             C YCGK   +K  + +H   +H+G K + C+ C + F+    L  H   H
Sbjct: 30  YPCQYCGKRFHQKSDMKKH-TFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 51.8 bits (125), Expect = 5e-09
 Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 27/109 (24%)

Query: 207 PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFE 266
                 C KT+TK  ++K H R  H   KPY C                          +
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHC--------------------------D 39

Query: 267 CKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTH 315
              C           +H   H+  +PF C  C + F    ++ LHM+ H
Sbjct: 40  WDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 37/115 (32%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           +   CGK  ++ S L +H+R+ HT       G+                          P
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRT-HT-------GEK-------------------------P 35

Query: 83  VECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHM 134
             C +  CG   +R D+LTRH    H+G + + C++CDR F+    L  HM  H 
Sbjct: 36  YHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV--CHQIFP-TDFRTKHMLVH 343
            +         CGK +    ++  H+RTHT  +P + CD   C   F  +D  T+H   H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDWDGCGWKFARSDELTRHYRKH 60

Query: 344 DVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
              +   C  C   F     L +HM++H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 173 RHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKY--CDKTFTKRMNVKTHERMK 230
           + T  ++     CG     +  L+ H     G +PYHC +  C   F +   +  H R K
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-K 59

Query: 231 HENHKPYECYICNK 244
           H  H+P++C  C++
Sbjct: 60  HTGHRPFQCQKCDR 73

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 19/102 (18%)

Query: 74  HKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPC--EQCDRKFTNGYKLKQHM 130
                     + + CGK  ++   L  H+   H+G K Y C  + C  KF    +L +H 
Sbjct: 2   RTATH---TCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

Query: 131 LTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKR 172
             H            +  + F+C +CD A     +L  H+KR
Sbjct: 58  RKH------------TGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.4 bits (124), Expect = 6e-09
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 28/101 (27%)

Query: 204 GAEPYHCKY--CDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHL 261
           G+    C +  C + F+ R  +  H++ +H + K + C                      
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSC---------------------- 41

Query: 262 AQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDF 302
                   C K+   +K  K+HM LHSD + ++C   G   
Sbjct: 42  ----PEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 287 HSDAKPFVCNI--CGKDFKLKYYVNLHMR-THTRIRPTFECD--VCHQIFPTDF-RTKHM 340
            S +    C+   CG+ F  + Y+N H +  H   +  F C    C + F       +HM
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEHM 60

Query: 341 LVHDVEKSHLCFVCGAGF 358
            +H   + ++C   G   
Sbjct: 61  KLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 17/80 (21%)

Query: 82  PVECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQ--CDRKFTNGYKLKQHMLTHMQK 136
            + C +  CG++ S +  L  H    H   K + C +  C + F     LK+HM  H   
Sbjct: 7   GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT 66

Query: 137 DTSISIDVISEIKKFKCDQC 156
                       + + C+  
Sbjct: 67  ------------RDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 6/68 (8%)

Query: 265 FECKL--CHKTIVSEKTFKKHM-ALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIR 319
             C    C +   + +    H    H   K F C    CGK F  K ++  HM+ H+  R
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 320 PTFECDVC 327
             + C+  
Sbjct: 68  D-YICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 149 KKFKCD--QCDYATKDKYNLGTHIKRRHTKEYSVLCTQ--CG--FGCYTNRELEEHQILT 202
               CD   C     ++  L  H K +H  + S  C +  CG  F    +  L+EH  L 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKH--LKEHMKLH 63

Query: 203 HGAEPYHCKYCDKTF 217
                Y C++   + 
Sbjct: 64  SDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 36.8 bits (86), Expect = 9e-04
 Identities = 21/101 (20%), Positives = 32/101 (31%), Gaps = 36/101 (35%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           + P CG++ S +  L  H +  H                            H+K      
Sbjct: 11  DFPGCGRIFSNRQYLNHHKKYQHI---------------------------HQKS----- 38

Query: 83  VECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKF 120
             C    CGK  + K  L  H+  +HS  ++Y CE      
Sbjct: 39  FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEFSGPSS 78

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 15/119 (12%), Positives = 33/119 (27%), Gaps = 24/119 (20%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLN 257
           +  +  GA  + CK C   +   + +  H  M    H   + +  +              
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVH--MNETGHYRDDNHETDN------------- 54

Query: 258 QVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
                          +   +++  +        K   C  CG  F+    +++HM    
Sbjct: 55  ---------NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.1 bits (119), Expect = 4e-08
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 276 SEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMR-THTRIRPTFECDVCHQIFPTD 334
           S  + K + ++ + A  F C  C   +     + +HM  T        E D  +    + 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 335 FRTKHMLVH----DVEKSHLCFVCGAGFVNDAGLKVHMRKHQ 372
            R + +L      D +K   C  CG  F +   L VHM K +
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.1 bits (106), Expect = 2e-06
 Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 6/90 (6%)

Query: 149 KKFKCDQCDYATKDKYNLGTHIK----RRHTKEYSVLCTQCGFGCYTNRELEEHQILTHG 204
            KF+C  C  A      L  H+      R     +       +     R L E +     
Sbjct: 18  SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77

Query: 205 AEPYHCKYCDKTFTKRMNVKTHERMKHENH 234
            +   C YC  +F    ++  H  M    H
Sbjct: 78  QKVLKCMYCGHSFESLQDLSVH--MIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.7 bits (97), Expect = 4e-05
 Identities = 16/93 (17%), Positives = 28/93 (30%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            C  C        +L  HM             DNN+        +  L+    K  ++  
Sbjct: 21  RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV 80

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQ 115
           ++C YCG        L+ H+      ++     
Sbjct: 81  LKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPS 113

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 37.8 bits (87), Expect = 9e-04
 Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 8/97 (8%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
              C  C        +LT H+            + D      +   +       +     
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGH-YRDDNHETDNNNPKRWSKPRKRSLLEMEGKE-- 75

Query: 142 IDVISEIKKFKCDQCDYATKDKYNLGTH-IKRRHTKE 177
                  K  KC  C ++ +   +L  H IK +H ++
Sbjct: 76  ----DAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 18/112 (16%), Positives = 28/112 (25%), Gaps = 33/112 (29%)

Query: 195 LEEHQILTH-GAEPYHCKYCDKTFTKRMNVKTHERM---KHENHKPYECYICNKILVSRG 250
                  TH G +PY C +CDKTF ++  +  H +     +     + C  C K    R 
Sbjct: 3   SGSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 251 RLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDF 302
            +  H                                +          G   
Sbjct: 62  TMARH-------AD---------------------NCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 4/84 (4%)

Query: 279 TFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPT---FECDVCHQIFP-TD 334
           +       H+  KP+ C+ C K F+ K  +++H + +         F C  C + F   +
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 335 FRTKHMLVHDVEKSHLCFVCGAGF 358
              +H               G   
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 18/99 (18%), Positives = 27/99 (27%), Gaps = 31/99 (31%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            C  C K   +K  L  H +  +                            +  P     
Sbjct: 17  ACSHCDKTFRQKQLLDMHFKR-YHD-------------------------PNFVPA---A 47

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKF 120
             CS CGK  +R++ + RH A   +G      E      
Sbjct: 48  FVCSKCGKTFTRRNTMARH-ADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 18/87 (20%), Positives = 24/87 (27%), Gaps = 12/87 (13%)

Query: 105 VHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDK 163
            H+G K Y C  CD+ F     L  H   +         D       F C +C      +
Sbjct: 9   THTGEKPYACSHCDKTFRQKQLLDMHFKRYH--------DPNFVPAAFVCSKCGKTFTRR 60

Query: 164 YNLGTHIKRRHTKEYSVLCTQCG--FG 188
             +  H          V     G   G
Sbjct: 61  NTMARH-ADNCAGPDGVEGENSGPSSG 86

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 6/57 (10%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-----KEYPCEQCDRKFTNGYKLKQHMLTH 133
           P  CS+C K   +K  L  H    +         + C +C + FT    + +H    
Sbjct: 15  PYACSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC 70

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHER-MKHENHKPYECYICNKILVSRGRLNEHLNQV 259
           T   E  Y CK C + +T   N   H       N K Y C  C K    +  +  H+  +
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 260 H 260
           H
Sbjct: 64  H 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 265 FECKLCHKTIVSEKTFKKHM--ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI 318
           + CK+C +       F +H   +   + K + C  C K+F  K  +  H++   +I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 82  PVECSYCGKVLSRKDKLTRHI-AAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
              C  C +V +      RH   +     K YPC  C ++FT    +  H+   
Sbjct: 10  TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 170 IKRRHTKEYSVLCTQCG--FGCYTNRELEEHQ-ILTHGAE-PYHCKYCDKTFTKRMNVKT 225
           ++     E++  C  C   +   +N     H           Y C +C K FT++ N+  
Sbjct: 1   MEFTKEGEHTYRCKVCSRVYTHISN--FCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTA 58

Query: 226 HERMKHE 232
           H ++ H+
Sbjct: 59  HVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 4/60 (6%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRT--HTRIRPTFECDVCHQIFP-TDFRTKHMLVH 343
                 + C +C + +        H  T     ++  + C  C + F   D  T H+ + 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 16/80 (20%), Positives = 24/80 (30%), Gaps = 31/80 (38%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            C VC +V +  S    H  + H                             +  K    
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSH----------------------------KRNVK---V 40

Query: 83  VECSYCGKVLSRKDKLTRHI 102
             C +C K  +RKD +T H+
Sbjct: 41  YPCPFCFKEFTRKDNMTAHV 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.4 bits (119), Expect = 3e-08
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 14/75 (18%)

Query: 104 AVHSG-KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKD 162
           +  S      C +C    ++   L+ H   H               + FKC+ C + TK 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIH------------CTDRPFKCNYCSFDTKQ 49

Query: 163 KYNLGTHIKRRHTKE 177
             NL  H  ++   +
Sbjct: 50  PSNLSKH-MKKFHGD 63

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFR-TKHMLVHDV 345
            S   P  C+ C      K  + +H R H   RP F+C+ C          +KHM     
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 346 EKS 348
           + S
Sbjct: 63  DMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
            +C  C  +  S+   + H  +H   +PF CN C  D K    ++ HM+   
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 16/92 (17%), Positives = 23/92 (25%), Gaps = 30/92 (32%)

Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPY 208
              KC +C Y+   K  L  H +R H                                P+
Sbjct: 8   HPEKCSECSYSCSSKAALRIH-ERIHC----------------------------TDRPF 38

Query: 209 HCKYCDKTFTKRMNVKTHERMKHENHKPYECY 240
            C YC     +  N+  H + K          
Sbjct: 39  KCNYCSFDTKQPSNLSKHMK-KFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
           P +CS C    S K  L  H   +H   + + C  C         L +HM   
Sbjct: 9   PEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHL 256
           +  +  P  C  C  + + +  ++ HER  H   +P++C  C+        L++H+
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHM 57

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 195 LEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNE 254
              H  +TH  +PY C  C  +F  + N+ +H+ + H   KPY C IC         L  
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV-HTGEKPYRCNICGAQFNRPANLKT 63

Query: 255 H 255
           H
Sbjct: 64  H 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 43.2 bits (103), Expect = 4e-06
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 165 NLGTHIKRRHTKEYSVLCTQCG--FGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMN 222
           +   H       +    C +C   F    N  L  H+ +  G +PY C  C   F +  N
Sbjct: 4   HHHHH-SHMTHSDKPYKCDRCQASFRYKGN--LASHKTVHTGEKPYRCNICGAQFNRPAN 60

Query: 223 VKTHERMKHENHKPY 237
           +KTH R+ H   KPY
Sbjct: 61  LKTHTRI-HSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.4 bits (101), Expect = 7e-06
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
           ++C  C  +   +     H  +H+  KP+ CNICG  F     +  H R H+
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
           P +C  C      K  L  H   VH+G K Y C  C  +F     LK H   H
Sbjct: 17  PYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 23/90 (25%), Positives = 30/90 (33%), Gaps = 28/90 (31%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHML 341
            H  +    KP+ C+ C   F+ K  +  H   HT                         
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG------------------------ 42

Query: 342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
               EK + C +CGA F   A LK H R H
Sbjct: 43  ----EKPYRCNICGAQFNRPANLKTHTRIH 68

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 37/114 (32%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
           + P C KV ++ S L +H+R+ HT       G+                          P
Sbjct: 19  DYPGCTKVYTKSSHLKAHLRT-HT-------GEK-------------------------P 45

Query: 83  VECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
            +C++  C    +R D+LTRH    H+G K + C  C+R F+    L  HM  H
Sbjct: 46  YKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 6/99 (6%)

Query: 279 TFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFEC--DVCHQIFP-T 333
           +           +   C+   C K +    ++  H+RTHT  +P ++C  + C   F  +
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTWEGCDWRFARS 60

Query: 334 DFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ 372
           D  T+H   H   K   C VC   F     L +HM++HQ
Sbjct: 61  DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 17/95 (17%)

Query: 84  ECSYCGKVLSRKDKLTRHIAAVHSG-KEYPC--EQCDRKFTNGYKLKQHMLTHMQKDTSI 140
           +   C KV ++   L  H+   H+G K Y C  E CD +F    +L +H   H       
Sbjct: 19  DYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH------- 70

Query: 141 SIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHT 175
                +  K F+C  C+ +     +L  H  +RH 
Sbjct: 71  -----TGAKPFQCGVCNRSFSRSDHLALH-MKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)

Query: 209 HCKYCDKTFTKRMNVKTHERMKHENHKPYECYI--CNKILVSRGRLNEHLNQVHLAQR-F 265
               C K +TK  ++K H R  H   KPY+C    C+        L  H  + H   + F
Sbjct: 19  DYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKPF 76

Query: 266 ECKLCHKTIVSEKTFKKHMALHSD 289
           +C +C+++         HM  H +
Sbjct: 77  QCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 202 TH-GAEPYHCKY--CDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHL 256
           TH G +PY C +  CD  F +   +  H R KH   KP++C +CN+       L  H+
Sbjct: 39  THTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHM 95

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNG 123
           P  C  CGK  SR D L  HI  VH+  + + C+      ++G
Sbjct: 12  PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 42.2 bits (100), Expect = 6e-06
 Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNK 244
           +     PY C+ C K F++  ++  H +  H + +P++C +   
Sbjct: 6   SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHM-RTHTRIRPTFECDVC 327
             +  S  KP++C  CGK F    ++N H+ + HT  RP  +C V 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVW 47

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 207 PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVH 260
            + C+ C + F ++ ++K H R  H N KPY C +CN+    R  L  H  ++H
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC 327
           + FVC +C + F  + ++  H R+HT  +P + C +C
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKP-YPCGLC 36

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHM 130
              C  C +  +R++ L RH    H+  K YPC  C+R FT    L +H 
Sbjct: 2   SFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 22/86 (25%), Positives = 29/86 (33%), Gaps = 33/86 (38%)

Query: 23  ECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAP 82
            C VC +  +R+  L  H RS HT                               K   P
Sbjct: 4   VCEVCTRAFARQEHLKRHYRS-HT-----------------------------NEK---P 30

Query: 83  VECSYCGKVLSRKDKLTRHIAAVHSG 108
             C  C +  +R+D L RH   +HSG
Sbjct: 31  YPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHM-RTHT 316
           F C++C +    ++  K+H   H++ KP+ C +C + F  +  +  H  + H+
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 18/94 (19%), Positives = 27/94 (28%), Gaps = 20/94 (21%)

Query: 231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDA 290
            E         C++   +   L  H+   H              V       H+    + 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEH--------------VGGPEQNNHVCYWEE- 64

Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
               C   GK FK KY +  H+R HT  +     
Sbjct: 65  ----CPREGKSFKAKYKLVNHIRVHTGEKS-GPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 42.6 bits (100), Expect = 1e-05
 Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 9/61 (14%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG----KEYPCE-----QCDRKFTNGYKLKQHMLT 132
                 C +  S   +L  H+   H G      + C      +  + F   YKL  H+  
Sbjct: 25  SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84

Query: 133 H 133
           H
Sbjct: 85  H 85

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 20/93 (21%)

Query: 203 HGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLA 262
                   K CD+TF+    + TH  M+H        ++C                    
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------------- 60

Query: 263 QRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC 295
              EC    K+  ++     H+ +H+  K    
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 43.2 bits (101), Expect = 3e-06
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
           ++ C+ C          KKH+  H+D +P+ C  C   FK K  +  HM++  
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.3 bits (91), Expect = 7e-05
 Identities = 13/50 (26%), Positives = 19/50 (38%)

Query: 84  ECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTH 133
            C  CG    +   L +HI      + Y C  C+  F     L +HM + 
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 36.2 bits (83), Expect = 8e-04
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query: 182 CTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHER 228
           C +CG        L++H        PYHC YC+ +F  + N+  H +
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.2 bits (103), Expect = 5e-06
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 195 LEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNE 254
               +        Y C  C K+F+   ++  H R  H   KPY+C  C K  + R  L  
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGEKPYKCDECGKAFIQRSHLIG 64

Query: 255 H 255
           H
Sbjct: 65  H 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.0 bits (100), Expect = 1e-05
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 165 NLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVK 224
           + G   + +  +     C +CG     + +L +H+    G +PY C  C K F +R ++ 
Sbjct: 5   SSGRS-EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63

Query: 225 THERMKHENHKPYE 238
            H R+ H    P  
Sbjct: 64  GHHRV-HTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC 327
           +      + + + C+ CGK F     ++ H RTHT  +P ++CD C
Sbjct: 8   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-YKCDEC 52

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
             +C  CGK  S    L++H    H+G K Y C++C + F     L  H   H
Sbjct: 18  RYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.8 bits (89), Expect = 4e-04
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
           ++C  C K+        KH   H+  KP+ C+ CGK F  + ++  H R HT
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 82  PVECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
           P  C    C +  SR D+LTRHI  +H+G K + C  C R F+    L  H+ TH
Sbjct: 19  PYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)

Query: 291 KPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFP-TDFRTKHMLVH 343
           +P+ C +  C + F     +  H+R HT  +P F+C +C + F  +D  T H+  H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.0 bits (94), Expect = 6e-05
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 281 KKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
            +H+ +H+  KPF C IC ++F    ++  H+RTHT
Sbjct: 38  TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 6e-06
 Identities = 53/367 (14%), Positives = 101/367 (27%), Gaps = 108/367 (29%)

Query: 7   SDTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQI 66
            + +A          + C +   + +R  ++   + +  T+         +  S  ++  
Sbjct: 254 QNAKAW-----NAFNLSCKIL--LTTRFKQVTDFLSAATTTHISL-----DHHSMTLTPD 301

Query: 67  QTMLM----LDHKK---P---KSRAPVECSYCGKVLS------------RKDKLTRHIAA 104
           +   +    LD +    P    +  P   S   + +               DKLT  I +
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361

Query: 105 VHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEI---KKFKCDQCDYATK 161
             +  E P E   RK    +      L+       I   ++S I                
Sbjct: 362 SLNVLE-PAEY--RKM---FD----RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL 411

Query: 162 DKYNLGTHIKRRHTKE--YSVLCTQCGFGCYTNRELEEHQILTHGAEPY--HCKYCDKTF 217
            KY+L   +++   KE   S+             E   H+ +    + Y     +     
Sbjct: 412 HKYSL---VEK-QPKESTISIPSIYLELKVKLENEYALHRSIV---DHYNIPKTFDSDDL 464

Query: 218 TKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRF------------ 265
                               + Y  + I    G    HL  +   +R             
Sbjct: 465 IP---------------PYLDQYFYSHI----GH---HLKNIEHPERMTLFRMVFLDFRF 502

Query: 266 -ECKLCHK------------TIVSEKTFKKHMALHSDA-KPFVCNICGKDFKLKYYVNLH 311
            E K+ H             T+   K +K ++  +    +  V  I   DF  K   NL 
Sbjct: 503 LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI--LDFLPKIEENLI 560

Query: 312 MRTHTRI 318
              +T +
Sbjct: 561 CSKYTDL 567

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
            S  KPF C+ C K F  K Y+ +H +TH   +P    
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGP 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
                   KP+ C ICG  F+    +  H+R HT
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHERMKHENHKPY 237
           + G E PY C+ C   F     +K+H R+ H    P 
Sbjct: 5   SSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSGPS 40

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 16/56 (28%), Positives = 22/56 (39%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
           + C  C K         +H  +H+  KP+ C  CGK F     +  H R HT    
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS 70

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFR-TKHM 340
               +HS  KP+ C  CGK F     +  H R HT  +P ++C  C + F  +     H 
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP-YKCLECGKAFSQNSGLINHQ 62

Query: 341 LVHDVEKSH 349
            +H    S 
Sbjct: 63  RIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.5 bits (96), Expect = 3e-05
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 171 KRRHTKEYSVLCTQCG--FGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHER 228
              H+ E    C +CG  F   +   L +HQ +  G +PY C  C K F++   +  H+R
Sbjct: 6   SGIHSGEKPYGCVECGKAFSRSSI--LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

Query: 229 MKHENHKPY 237
           + H +    
Sbjct: 64  I-HTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
           P  C  CGK  SR   L +H   VH+G K Y C +C + F+    L  H   H
Sbjct: 14  PYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 18/96 (18%)

Query: 84  ECSY--CGKVLSRKDKLTRHIAAVHSG-KEYPCEQ--CDRKFTNGYKLKQHMLTHMQKDT 138
            C +  CGK   + ++L  H    H+    Y C    CD++F+   +LK+H   H     
Sbjct: 3   VCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH----- 56

Query: 139 SISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRH 174
                  +     K D C +  K       H+   H
Sbjct: 57  -------AGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 22/111 (19%), Positives = 31/111 (27%), Gaps = 30/111 (27%)

Query: 208 YHCKY--CDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRF 265
           Y C +  C K F K   +K H+   H    PYEC                          
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYEC-------------------------- 34

Query: 266 ECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLK-YYVNLHMRTH 315
             + C K        K+H  +H+       + C    K    Y+      H
Sbjct: 35  PHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
             +  +  KPF C  CG +F     +  H+R+H R  P
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP 40

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECY 240
           +   E P+ CK C   F+   ++  H R  HE   P    
Sbjct: 6   SGTGEKPFQCKECGMNFSWSCSLFKHLRS-HERTDPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K+FTK+  +  H+++ H   KP   
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQI-HTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ C+ICGK F  K  +++H + HT  +P    
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C +C K+F  + N+ TH+R+ H   K    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI-HTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +  KPF C  CGK F+ K  +  H R HT  +     
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPS 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F +  ++  H R  H   KP   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  S  +P+ CN CGK+F    ++  H++ H R +     
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+VCN CGK F+ K Y+ +H RTHT        
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F  +  +  H R  H        
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT-HTGESGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
              +  S  K   C+ CG+ F LK ++N H R HT
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT 36

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD 325
              +  +  KP+ CN+CGK F L  ++N H+R HT+        
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 1/43 (2%)

Query: 197 EHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                  G +PY C  C K F    ++  H R+ H        
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-HTQETLSGP 43

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.8 bits (97), Expect = 4e-05
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 4/88 (4%)

Query: 196 EEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEH 255
                     E Y C+ C+   +  +   +HER+         C  C+    S     EH
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEH 61

Query: 256 LNQVHLAQRFECKLCHKTIVSEKTFKKH 283
            ++    ++  C  C +T  S  +  +H
Sbjct: 62  ESK-CEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.4 bits (96), Expect = 4e-05
 Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 15/104 (14%)

Query: 74  HKKPKSRAPVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTH 133
               +++   +C  C   LS   +   H     +     C  C  +F +    ++H    
Sbjct: 8   ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHESKC 65

Query: 134 MQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
                        E KK  C +C    K  +++  H    H + 
Sbjct: 66  -------------EYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.7 bits (94), Expect = 8e-05
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 232 ENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAK 291
           EN + Y+C +CN  L S      H           C  C     S +  ++H +   + K
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYK 68

Query: 292 PFVCNICGKDFKLKYYVNLH 311
              C  C + FK  + +  H
Sbjct: 69  KLTCLECMRTFKSSFSIWRH 88

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G  PY C  C K FT R N+  H+++ H   KP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-HTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F+ R ++ TH+ + H   KP   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HTGKKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C+ C K +  + N+  H+++ H   +P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-HTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ C  CGK +  K+ +++H + HT  RP    
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K+F K+  +  H+R+ H    P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI-HTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ C+ CGK F  K  +++H R HT   P    
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 197 EHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                  G +P+ C+ C K FT+  ++ +H+R+ H   KP   
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-HTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  S  KPF C  CGK F    +++ H R HT  +P    
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
           +     PY C  C+K+F+ ++ +  H+RM H   KP   
Sbjct: 6   SGAGVNPYKCSQCEKSFSGKLRLLVHQRM-HTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +   P+ C+ C K F  K  + +H R HTR +P    
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +  KP+ C+ CGK F  K Y+ +HMRTH+  +P    
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F+ +  +  H R  H   KP   
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT-HSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY+CK C K+F     +  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HSGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY CK C K FT++ ++  H++  H   KP   
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-HTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ C +C K F  K ++  H +THT  +P    
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT R N+ TH+++ H   KP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-HTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 197 EHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                  G   Y C  C K F ++  +  H+R+ H   KP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRI-HRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  + + C+ CGK F  K  +++H R H   +P    
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  S  KP+ CN CGK F  K  ++ H RTHT  +P    
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C KTF+++  +  H+R  H   KP   
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRT-HTGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F+ R ++  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-HSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ C++CGK F  +  +++H R H+  +P    
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT R N+  H+++ H   KP   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKI-HTKQKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT++  +  H++  H   +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ C+ CGK F  K  +++H ++HT  R     
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  S  +PF CN CGK F  + ++  H+R H+R +     
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F ++ N+  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-HTGEKPSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
             +  S  K   C+ CGK+F     + +H R H 
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G + Y C  C K F++  +++TH+R+ H   KP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-HTGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F  + N+  H+R  H        
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRT-HTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +  KP+ CN C K F  K  + +H RTHT        
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSS 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
                    P++C  CGK F  +  + +H R+ ++  P
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHERMKHENHKPY 237
           + G E PY C  C K+FT+R ++  H+R       P 
Sbjct: 5   SSGGETPYLCGQCGKSFTQRGSLAVHQRS-CSQSGPS 40

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT+  ++  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRI-HTGVKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C+ C K FT+   + +H+R+ H   KP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV-HTGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K+FT +  ++ H++  H   +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-HTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
             +  +  KP+ C+ CGK F  K  + +H + HT
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT 36

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C KTF+ +  +  H+R  H   KP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-HTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ C+ C K F LK  + +H R+HT ++P    
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
             +  S  KP+ CN CGK F  K  + +H RTH 
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA 36

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G + + C  C KTFT+  ++  H+R+ H   KP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI-HTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
             +  +  K F CN C K F     + +H R HT
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT 36

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ CK C K F + +++ +H R+ H   KP   
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRI-HTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  S  KPF C  CGK F+   ++  H+R HT  +P    
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F  R ++  H+   H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-HSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ CN CGK F+ +  + +H  TH+  +P    
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C YC K F     +  H+R+ H   KP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI-HTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 9e-04
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  S  KP+VC+ CGK F L   +  H R HT  +P    
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  + + C+ CGK F  K  + +H R HT  +P    
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 197 EHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                  G   Y C  C K F ++  +  H+R+ H   KP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRI-HTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY CK C K F++  ++  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRV-HTGEKPSGP 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR 317
              +  +D+K + CN CGK F   +++  H + HTR
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KPF C  CGK F  +  +N+H + HT  +P    
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C  C K F++R  +  H ++ H   KP   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKL-HTGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 202 THGAE-PYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
           +   E  + C+ CD  F++  +++ H+ + H   KP   
Sbjct: 6   SGMGEKTWKCRECDMCFSQASSLRLHQNV-HVGEKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +  KP  C  CGK F  K  + +H RTH   +     
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)

Query: 202 TH-GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
           +  G +P  C  C K F  +  +  H+R  H + K    
Sbjct: 6   SGTGEKPCKCTECGKAFCWKSQLIMHQRT-HVDDKHSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K+F    ++  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI-HTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F++   +  H+R+ H   KP   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRV-HTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ CN CGK F     +  H R HT  +P    
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +  KPF C+ C K F  K  + +H RTHT  +P    
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C  C K F  + N+  H+R  H   KP   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-HTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C  C K++ +R+++  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-HTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KPF C  CGK +  + ++  H R HT  +P    
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K + +R+++  H+R+ H   K    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV-HTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
              +  S  KP+ C  CGK +K +  ++ H R HT
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT 36

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY+C+ C K F     ++ H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-HTGEKPSGP 43

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (87), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR 317
              +  +   PF C+ C + F  + Y+  H RTH R
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C  C K+F+    + TH+R+ H   KP   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRI-HTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KPF C  CGK F +   +  H R HT  +P    
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKP-SGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +   PF+C+ CGK F  K  + +H + HT  RP    
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G  P+ C  C K FT + N+  H+++ H   +P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKI-HTGERPSGP 43

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 283 HMALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIRPTFECD 325
             +  +  KPF C    CG  F     ++ H R+H+ ++P     
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPS 46

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT+  ++  H  + H   KP   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F     +  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI-HTGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G  PY C  C K F+++  + +H+R  H   KP   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRT-HAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +   P+ C+ CGK F  KY +  H RTH   +P    
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  +P+ C  CGK FK K  +  H R+HT  +P    
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G  PY C  C K F  + ++  H R  H   KP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRS-HTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F +  ++  H+ + H   KP   
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLI-HTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT+  ++  H R+ H   KP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI-HTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP++CN CGK F  K ++N H R HT  +P    
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K+F ++ ++  H R+ H   KP   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRI-HTGEKPSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 9/34 (26%), Positives = 13/34 (38%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
                   KP+ C  CG  F    ++  H+  HT
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G + + C  C K FT++  +  H+++ H   KP   
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKI-HTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F    N+ TH+ + H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-HTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT+  ++  H  + H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F++   +  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRI-HTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KP+ CN CGK F     +  H R HT  +P    
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C+ C K F  R ++ TH  + H   KP   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMV-HTGEKPSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 202 TH-GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
           +  G +PY CK C KTF +  ++  H+R+ H   +    
Sbjct: 6   SGSGKKPYECKECRKTFIQIGHLNQHKRV-HTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  S  KP+ C  C K F    ++N H R HT  R     
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F +  ++  H R+ H  ++P   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI-HTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  S  KP+ C+ CGK F    ++N H R HT  RP    
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGP 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC 327
               K   C ICGK F+  Y++N H  +H+  +P +     
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPS 46

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 197 EHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                  G +PY C+ C K F    ++  H  + H   +P   
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-HSGERPSGP 43

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLN 257
             + +     + C  C   F+  +++K H R          C +C K   S     +H+ 
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQHIR---YTEHTKVCPVCKKEFTSTDSALDHVC 121

Query: 258 QVH 260
           + H
Sbjct: 122 KKH 124

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD 325
             +  +  KPF C+ICGK F  +  +N H   HT  +P     
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C  C K+F  R  +  H  + H   KP   
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV-HTAEKPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
                   KP+ C+ CGK F  K  + +H+R HT
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/35 (25%), Positives = 12/35 (34%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
              +     +   C+ CGK F        H R HT
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT 36

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G + Y C  C K F++   +  H+++ H   KP   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI-HTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C+ C K+F+    +  H+R+ H    P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRI-HTGENPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
              +     KP+ C+ CGK F   Y +  H  THTR +P
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP 40

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT+  ++  H R+ H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV-HTGGKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
             +  S  KP+ C  CGK +  +  +++H R H 
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM 36

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                   +PY C+ C K + +R+N+  H+R+ H   K    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-HMGEKTSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K FT+  ++  H  + H   KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-HTGEKPSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 2/39 (5%)

Query: 202 TH-GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
              G  PY C  C K F ++  + +H+R  H        
Sbjct: 4   GSSGENPYECSECGKAFNRKDQLISHQRT-HAGESGPSS 41

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F    +   H+R+ H   +P   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL-HTGQRPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F+   ++  H+R+ H   KP   
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRV-HSGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +P+ C  C K F+  + +  H R+ H   KP   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI-HTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
              +  +  KPF C  CGK F     +N H R HT  +P    
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G  P+ C  C K+F +  ++  H+R+ H   KP   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-HTGEKPSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
              +  +   P+ C  CGK F  K  +  H +TH+    
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG 40

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G + Y+CK C K+F++   +  HER+ H   KP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC 324
             +  +  K + C  CGK F     +  H R H+  +P    
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
                 G +PY C  C K F+   ++ TH+ + H   KP   
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI-HTGEKPSGP 43

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	372
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.78
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.77
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.76
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.75
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.69
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.69
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.67
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.63
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.63
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.61
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.6
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.59
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.58
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.55
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.53
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.51
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.51
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.48
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.47
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.46
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.46
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.46
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.45
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.45
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.41
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.41
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.39
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.38
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.38
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.38
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.37
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.35
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.35
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.33
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.3
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.3
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.26
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.24
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.22
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.19
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.14
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.08
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.02
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.01
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.01
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.01
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.0
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.0
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.99
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.99
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.99
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.99
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.98
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.98
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.95
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.94
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.93
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.93
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.93
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.92
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.91
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.91
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.91
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.9
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.9
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.89
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.89
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.86
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.86
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.85
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.84
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.84
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.82
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.81
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.78
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.77
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.7
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.65
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.61
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.56
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.56
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.55
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.53
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.49
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.48
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.47
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.45
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.42
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.41
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.41
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.39
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.36
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.31
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.3
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.26
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.24
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.23
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.23
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.22
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.22
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.51
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.2
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.18
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.18
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.16
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.16
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.16
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.16
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.15
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.15
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.14
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.13
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.11
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.1
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.09
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.09
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.07
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.06
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.06
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.32
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.05
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.29
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.27
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.0
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.25
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.23
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.96
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.96
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.95
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.93
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.86
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.84
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.73
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.13
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.13
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.09
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.97
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.81
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.3
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.81
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.67
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.51
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.33
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	93.91
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	92.3
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.23
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	90.99
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.82
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	89.11
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	88.93
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.6
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	88.42
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	87.6
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.09
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	83.25
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	81.62
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	81.62

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.3e-38  Score=253.95  Aligned_cols=177  Identities=30%  Similarity=0.622  Sum_probs=92.8

Q ss_pred             HHHHHHHHhcCCCCcccccchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhhhhccCcccccccccc
Q psy16828        194 ELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKT  273 (372)
Q Consensus       194 ~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~  273 (372)
                      .|..|+..+.+.++|.|+.|++.|.+...|..|++. |.++++|.|++|++.|.+...|..|++.++++++|.|++|++.
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   86 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRT-HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKS   86 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGC-C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHH-cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCc
Confidence            344555555555556666666666666666666555 5555566666666666666666666666666666666666666


Q ss_pred             cCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-ccccccccccCCCceeCc
Q psy16828        274 IVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTKHMLVHDVEKSHLCF  352 (372)
Q Consensus       274 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~h~~~h~~~~~~~C~  352 (372)
                      |.+...|..|++.|.++++|.|+.|++.|.+.+.|..|+++|+++++ |.|+.|++.|... .|..|++.|++++||.|+
T Consensus        87 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           87 FSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP-YKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             cCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCC-eECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            66666666666666666666666666666666666666666665555 6666666666554 555566666666666666


Q ss_pred             ccCCcccChhhHHHHHhhcC
Q psy16828        353 VCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       353 ~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +|++.|.....|..|+++|+
T Consensus       166 ~C~~~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          166 ECGKSFSRRDALNVHQRTHT  185 (190)
T ss_dssp             TTCCEESSHHHHHHHHTTC-
T ss_pred             CCCCccCCHHHHHHHHHhcC
Confidence            66666666666666666653

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.2e-38  Score=253.10  Aligned_cols=182  Identities=28%  Similarity=0.573  Sum_probs=100.8

Q ss_pred             hHHHHHhhhcCCCceeecCCCCCcccChHHHHHHHHHhcCCCCcccccchhhhcChhhhHhhhhhhccCCCCcccccccc
Q psy16828        165 NLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNK  244 (372)
Q Consensus       165 ~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~  244 (372)
                      .|..|+ ..+.++.+|.|+.|++.|.+...|..|+..+.+.++|.|+.|++.|.+...|..|++. |.++++|.|++|++
T Consensus         8 ~l~~h~-~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~   85 (190)
T 2i13_A            8 SSVAQA-ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT-HTGEKPYKCPECGK   85 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHH-HHCCCCEECTTTCC
T ss_pred             cchhhh-hhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHh-cCCCCCccCcccCC
Confidence            455554 4556666666666666666666666666666666666666666666666666666665 55666666666666


Q ss_pred             cccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        245 ILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       245 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      .|.+...|..|++.++++++|.|++|++.|.+...|..|+++|+++++|.|+.|++.|.+.+.|..|+++|+++++ |.|
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~-~~C  164 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP-YKC  164 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EEC
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC-eEC
Confidence            6666666666666666666666666666666666666666666666666666666666666666666666666666 666


Q ss_pred             CCCCCcCCCC-ccccccccccCCCce
Q psy16828        325 DVCHQIFPTD-FRTKHMLVHDVEKSH  349 (372)
Q Consensus       325 ~~C~~~f~~~-~l~~h~~~h~~~~~~  349 (372)
                      ++|++.|... .|..|++.|+|++||
T Consensus       165 ~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          165 PECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TTTCCEESSHHHHHHHHTTC------
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            6666666555 666666666666654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=7.1e-32  Score=216.13  Aligned_cols=162  Identities=26%  Similarity=0.462  Sum_probs=88.5

Q ss_pred             CCccc--ccchhhhcChhhhHhhhhhhccCCCCccc--ccccccccccchHHhHHhhhhccCccccc--ccccccCChHH
Q psy16828        206 EPYHC--KYCDKTFTKRMNVKTHERMKHENHKPYEC--YICNKILVSRGRLNEHLNQVHLAQRFECK--LCHKTIVSEKT  279 (372)
Q Consensus       206 ~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~  279 (372)
                      ++|.|  +.|++.|.+...|..|++. |.++++|.|  +.|++.|.+...|..|++.|+++++|.|+  .|++.|.+...
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   89 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCK-HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN   89 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHH-HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHh-cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHH
Confidence            34444  3444444444445555444 444445555  44555555555555555555555555555  45555555555


Q ss_pred             HHHHH-hhh-cCCCCccc--CcccccccchhhHHHHHhhhcCCCCCccCCC--CCCcCCCC-ccccccccccCCCceeCc
Q psy16828        280 FKKHM-ALH-SDAKPFVC--NICGKDFKLKYYVNLHMRTHTRIRPTFECDV--CHQIFPTD-FRTKHMLVHDVEKSHLCF  352 (372)
Q Consensus       280 l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~--C~~~f~~~-~l~~h~~~h~~~~~~~C~  352 (372)
                      |..|+ +.| .++++|.|  +.|++.|.+.+.|..|+++|+++++ |.|++  |++.|... .|..|+++|+|   |.|.
T Consensus        90 l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~  165 (190)
T 1tf6_A           90 MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAG---YPCK  165 (190)
T ss_dssp             HHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCS-SBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCC
T ss_pred             HHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCC-ccCCCCCCCchhcCHHHHHHHHHHhCC---CcCC
Confidence            55555 334 23445555  5555555555555555555555554 55544  55555444 55555555555   5666


Q ss_pred             c---cCCcccChhhHHHHHhhcC
Q psy16828        353 V---CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       353 ~---C~~~f~~~~~l~~H~~~h~  372 (372)
                      .   |++.|.....|..|+++|+
T Consensus       166 ~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          166 KDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             STTTCCCCCSCHHHHHHHHTTCC
T ss_pred             CCCcCCCccccHHHHHHHHHhhc
Confidence            6   7777777777777777764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=3.8e-31  Score=211.89  Aligned_cols=167  Identities=25%  Similarity=0.450  Sum_probs=125.5

Q ss_pred             ccCcccC--CCCccccCChhhHHHHHhhhcCCCceeec--CCCCCcccChHHHHHHHHHhcCCCCcccc--cchhhhcCh
Q psy16828        147 EIKKFKC--DQCDYATKDKYNLGTHIKRRHTKEYSVLC--TQCGFGCYTNRELEEHQILTHGAEPYHCK--YCDKTFTKR  220 (372)
Q Consensus       147 ~~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~  220 (372)
                      ..++|.|  +.|+..|.+...|..|+ ..|.++.+|.|  +.|++.|.+...|..|+..|.+.++|.|+  .|++.|.+.
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCH
Confidence            3466777  57888888888888886 56777777788  77888888888888887777777778887  788888777


Q ss_pred             hhhHhhhhhhc-cCCCCccc--ccccccccccchHHhHHhhhhccCcccccc--cccccCChHHHHHHHhhhcCCCCccc
Q psy16828        221 MNVKTHERMKH-ENHKPYEC--YICNKILVSRGRLNEHLNQVHLAQRFECKL--CHKTIVSEKTFKKHMALHSDAKPFVC  295 (372)
Q Consensus       221 ~~l~~H~~~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C  295 (372)
                      ..|..|+...| .++.+|.|  +.|++.|.+.+.|..|++.|+++++|.|++  |+++|.+.+.|..|+++|++   |.|
T Consensus        88 ~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C  164 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC  164 (190)
T ss_dssp             HHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCC
T ss_pred             HHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcC
Confidence            78888874445 46677777  777777777777777777777777777766  77777777777777777776   677


Q ss_pred             Cc---ccccccchhhHHHHHhhhcC
Q psy16828        296 NI---CGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       296 ~~---C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ..   |++.|.+...|..|+++|++
T Consensus       165 ~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          165 KKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CCCCcCCCccccHHHHHHHHHhhcC
Confidence            77   77777777777777777765

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=7.8e-28  Score=186.10  Aligned_cols=135  Identities=24%  Similarity=0.491  Sum_probs=109.0

Q ss_pred             cccccccccccccchHHhHHh---hhhccCccc-----ccccccccCChHHHHHHHhhhcCCCCcccCc--ccccccchh
Q psy16828        237 YECYICNKILVSRGRLNEHLN---QVHLAQRFE-----CKLCHKTIVSEKTFKKHMALHSDAKPFVCNI--CGKDFKLKY  306 (372)
Q Consensus       237 ~~C~~C~~~f~~~~~l~~H~~---~~~~~~~~~-----C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~  306 (372)
                      +.|+.|++.|.+...|..|++   .+.+.++|.     |..|++.|.+...|..|++.|.+++||.|++  |++.|.+..
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH
Confidence            444444444444444444444   233334444     4556699999999999999999999999985  999999999


Q ss_pred             hHHHHHhhhcCCCCCccCCC--CCCcCCCC-cccccc-ccccCCCceeCcc--cCCcccChhhHHHHHhhcC
Q psy16828        307 YVNLHMRTHTRIRPTFECDV--CHQIFPTD-FRTKHM-LVHDVEKSHLCFV--CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       307 ~l~~H~~~h~~~~~~~~C~~--C~~~f~~~-~l~~h~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  372 (372)
                      .|..|+++|++.++ |.|++  |++.|.+. .|..|+ +.|.++++|.|++  |++.|.....|..|+++|+
T Consensus        84 ~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           84 NLKTHLRSHTGEKP-YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             HHHHHHHHTTTCCC-EECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             HHHHHHHHcCCCCC-eeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            99999999999888 99998  99999776 888898 8999999999988  9999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=1.1e-26  Score=179.56  Aligned_cols=137  Identities=23%  Similarity=0.423  Sum_probs=92.5

Q ss_pred             eecCCCCCcccChHHHHHHHH---HhcCCCCccc-----ccchhhhcChhhhHhhhhhhccCCCCccccc--cccccccc
Q psy16828        180 VLCTQCGFGCYTNRELEEHQI---LTHGAEPYHC-----KYCDKTFTKRMNVKTHERMKHENHKPYECYI--CNKILVSR  249 (372)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~---~~~~~~~~~C-----~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~  249 (372)
                      +.|+.|++.|.+...|..|+.   .+.+.++|.|     +.|++.|.+...|..|++. |.++++|.|++  |++.|.+.
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~   82 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-HTGEKPHKCTFEGCRKSYSRL   82 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH-HHCCCCCCCCSTTCCCCCSSH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHh-cCCCCCccCCCCCCCCcccCH
Confidence            334444444444444444443   2223334444     3445777777777777776 66777777764  77777777


Q ss_pred             chHHhHHhhhhccCcccccc--cccccCChHHHHHHH-hhhcCCCCcccCc--ccccccchhhHHHHHhhhcC
Q psy16828        250 GRLNEHLNQVHLAQRFECKL--CHKTIVSEKTFKKHM-ALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       250 ~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ..|..|++.|+++++|.|++  |++.|.+.+.|..|+ +.|.++++|.|+.  |++.|.+.+.|..|+++|++
T Consensus        83 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           83 ENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            77777777777777777777  888887778888887 6777788888877  88888888888888877764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=2.8e-25  Score=165.05  Aligned_cols=96  Identities=22%  Similarity=0.497  Sum_probs=89.6

Q ss_pred             hhhhhhccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccc
Q psy16828        225 THERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKL  304 (372)
Q Consensus       225 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  304 (372)
                      .|....|.|+++|.|++|++.|.+.+.|..|++.|.++++|.|++|+++|.+.+.|..|+++|++++||.|+.|++.|.+
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            34444489999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHhhhcCCCC
Q psy16828        305 KYYVNLHMRTHTRIRP  320 (372)
Q Consensus       305 ~~~l~~H~~~h~~~~~  320 (372)
                      .+.|..|+++|++++|
T Consensus        91 ~~~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHHHHHHTCCCT
T ss_pred             HHHHHHHhHHhcCCCC
Confidence            9999999999998765

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=6.8e-25  Score=161.54  Aligned_cols=110  Identities=27%  Similarity=0.569  Sum_probs=82.7

Q ss_pred             ccCcccccc--cccccCChHHHHHHHhhhcCCCCcccC--cccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-c
Q psy16828        261 LAQRFECKL--CHKTIVSEKTFKKHMALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-F  335 (372)
Q Consensus       261 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~  335 (372)
                      ++++|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|++.++ |.|+.|++.|... .
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKTCQRKFSRSDH   81 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-ccCCccCchhCCHHH
Confidence            345667765  777777777777777777777777776  577777777777777777766666 7777777777665 6


Q ss_pred             cccccccccCCCceeC--cccCCcccChhhHHHHHhhc
Q psy16828        336 RTKHMLVHDVEKSHLC--FVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       336 l~~h~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  371 (372)
                      |..|++.|+++++|.|  +.|++.|.....|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            6667777777788999  88999999999999999987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=2.8e-24  Score=159.48  Aligned_cols=109  Identities=31%  Similarity=0.525  Sum_probs=76.2

Q ss_pred             ccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhh---cCCCCCccCCCCCCcCCCC-cc
Q psy16828        261 LAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTH---TRIRPTFECDVCHQIFPTD-FR  336 (372)
Q Consensus       261 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~~~~~~C~~C~~~f~~~-~l  336 (372)
                      +.++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+..+   .+.++ |.|++|++.|... .|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~-~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-FTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC-EECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC-eECCCCCCccCCHHHH
Confidence            3456666667767767777777777776666777777777777777777776653   33344 7777777777665 66


Q ss_pred             ccccccccCCCceeCcccCCcccChhhHHHHHhh
Q psy16828        337 TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       337 ~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      ..|++.|++++||.|++|++.|.....|..|++.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence            6677777777788888888888888888888863

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=9.8e-24  Score=156.43  Aligned_cols=113  Identities=30%  Similarity=0.652  Sum_probs=56.1

Q ss_pred             CCcccc--cccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc--ccccccchhhHHH
Q psy16828        235 KPYECY--ICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNL  310 (372)
Q Consensus       235 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~  310 (372)
                      ++|.|+  .|++.|.+...|..|++.| +.++|.|++|++.|.+...|..|++.|.++++|.|++  |++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            345555  4555555555555555444 4445555555555555555555555555555555543  5555555555555


Q ss_pred             HHhhhcCCCCCccCC--CCCCcCCCC-ccccccccccCCCce
Q psy16828        311 HMRTHTRIRPTFECD--VCHQIFPTD-FRTKHMLVHDVEKSH  349 (372)
Q Consensus       311 H~~~h~~~~~~~~C~--~C~~~f~~~-~l~~h~~~h~~~~~~  349 (372)
                      |+++|+++++ |.|+  .|++.|... .|..|+++|++++++
T Consensus        83 H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           83 HVRIHTGDRP-YVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHCCCC-CCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHhCCCCc-eECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            5555555544 5553  255555443 444555555555443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=1.2e-23  Score=162.34  Aligned_cols=119  Identities=29%  Similarity=0.515  Sum_probs=82.6

Q ss_pred             CCCCcccccccccccccchHHhHHhhhh-ccCc--------ccccccccccCChHHHHHHHhhhcCCCCcccCc--cccc
Q psy16828        233 NHKPYECYICNKILVSRGRLNEHLNQVH-LAQR--------FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI--CGKD  301 (372)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~-~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~  301 (372)
                      .+.+|.|.+|++.|.+...|..|++.+| +..+        |.|++|++.|.+...|..|++.|+++++|.|.+  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            3445556666666666666666655522 2222        677777777777777777777777777777776  7777


Q ss_pred             ccchhhHHHHHhhhcCCCCCccCCC--CCCcCCCC-ccccccccccCCCceeCc
Q psy16828        302 FKLKYYVNLHMRTHTRIRPTFECDV--CHQIFPTD-FRTKHMLVHDVEKSHLCF  352 (372)
Q Consensus       302 f~~~~~l~~H~~~h~~~~~~~~C~~--C~~~f~~~-~l~~h~~~h~~~~~~~C~  352 (372)
                      |.+...|..|+++|++.++ |.|++  |++.|... .|..|+++|+|++||.|.
T Consensus       102 f~~~~~L~~H~~~h~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCS-BCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cCCHHHHHHHHHhhCCCCC-ccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            7777777777777777776 77776  77777665 677777777777777774

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=2e-23  Score=154.81  Aligned_cols=113  Identities=29%  Similarity=0.597  Sum_probs=79.1

Q ss_pred             CCCCcccccchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhh---hhccCcccccccccccCChHHH
Q psy16828        204 GAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQ---VHLAQRFECKLCHKTIVSEKTF  280 (372)
Q Consensus       204 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---~~~~~~~~C~~C~~~f~~~~~l  280 (372)
                      +.++|.|+.|++.|.+...|..|++. |.++++|.|++|++.|.+...|..|+..   +.+.++|.|++|++.|.+...|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHH-HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHh-CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            34556666666666666666666655 5556666666666666666666666654   3456677888888888888888


Q ss_pred             HHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcC
Q psy16828        281 KKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       281 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ..|+++|++++||.|++|++.|.+.+.|..|++..|.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            8888888888888888888888888888888775443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=1.7e-23  Score=161.54  Aligned_cols=88  Identities=25%  Similarity=0.431  Sum_probs=74.9

Q ss_pred             cccccccccccccchHHhHHhhhhccCcccccc--cccccCChHHHHHHHhhhcCCCCcccCc--ccccccchhhHHHHH
Q psy16828        237 YECYICNKILVSRGRLNEHLNQVHLAQRFECKL--CHKTIVSEKTFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHM  312 (372)
Q Consensus       237 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~  312 (372)
                      |.|++|++.|.+...|..|++.|+++++|.|.+  |++.|.+...|..|+++|+++++|.|.+  |++.|.+.+.|..|+
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~  142 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM  142 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH
Confidence            678888888888888888888888888888887  8888888888888888888888888887  888888888888888


Q ss_pred             hhhcCCCCCccCC
Q psy16828        313 RTHTRIRPTFECD  325 (372)
Q Consensus       313 ~~h~~~~~~~~C~  325 (372)
                      ++|+++++ |.|.
T Consensus       143 ~~H~~~k~-~~c~  154 (155)
T 2rpc_A          143 HVHTSDKS-GPSS  154 (155)
T ss_dssp             TTTTSCCC-SCSC
T ss_pred             HHhcCCCC-CCCC
Confidence            88888887 8775

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=1.6e-23  Score=154.09  Aligned_cols=111  Identities=29%  Similarity=0.646  Sum_probs=88.8

Q ss_pred             CCCCccccc--chhhhcChhhhHhhhhhhccCCCCcccc--cccccccccchHHhHHhhhhccCcccccccccccCChHH
Q psy16828        204 GAEPYHCKY--CDKTFTKRMNVKTHERMKHENHKPYECY--ICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKT  279 (372)
Q Consensus       204 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~  279 (372)
                      +.++|.|++  |++.|.+...|..|++. |.++++|.|+  .|++.|.+...|..|++.|+++++|.|++|++.|.+...
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHh-hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            456777776  77777777777777776 6777778887  688888888888888888888888888888888888888


Q ss_pred             HHHHHhhhcCCCCccc--CcccccccchhhHHHHHhhh
Q psy16828        280 FKKHMALHSDAKPFVC--NICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       280 l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  315 (372)
                      |..|+++|+++++|.|  +.|++.|.+.+.|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            8888888888888888  77888888888888888765

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=3.7e-23  Score=153.32  Aligned_cols=114  Identities=24%  Similarity=0.531  Sum_probs=94.0

Q ss_pred             CCCcccc--cchhhhcChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhhhhccCcccccc--cccccCChHHH
Q psy16828        205 AEPYHCK--YCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKL--CHKTIVSEKTF  280 (372)
Q Consensus       205 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l  280 (372)
                      .++|.|+  .|++.|.+...|..|++. | ++++|.|++|++.|.+...|..|++.|+++++|.|++  |++.|.+...|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHT-H-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGG-G-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHH-c-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            4567887  788888888888888877 5 7788888888888888888888888888888899976  99999999999


Q ss_pred             HHHHhhhcCCCCcccC--cccccccchhhHHHHHhhhcCCCC
Q psy16828        281 KKHMALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       281 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      ..|+++|+++++|.|+  .|++.|.+.+.|..|+++|+++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            9999999999999996  499999999999999999988765

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=8.5e-23  Score=151.62  Aligned_cols=89  Identities=22%  Similarity=0.457  Sum_probs=45.3

Q ss_pred             hhcCCCceeecCCCCCcccChHHHHHHHHHhcCCCCcccccchhhhcChhhhHhhhhhhccCCCCcccccccccccccch
Q psy16828        172 RRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGR  251 (372)
Q Consensus       172 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~  251 (372)
                      ..|.|+.+|.|++|++.|.+...|..|++.|.+.+||.|+.|++.|.+...|..|+++ |.+++||.|++|++.|.+.+.
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~   93 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH-HTGERRYQCLACGKSFINYQF   93 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH-HHTCCCEEESSSCCEESSHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc-cCCCccccCCCCCCCcCCHHH
Confidence            3445555555555555555555555555555555555555555555555555555444 444444444444444444444


Q ss_pred             HHhHHhhhhc
Q psy16828        252 LNEHLNQVHL  261 (372)
Q Consensus       252 l~~H~~~~~~  261 (372)
                      |..|++.+++
T Consensus        94 L~~H~~~hh~  103 (133)
T 2lt7_A           94 MSSHIKSVHS  103 (133)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHhHHhcC
Confidence            4444444443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=2.9e-21  Score=140.96  Aligned_cols=97  Identities=23%  Similarity=0.291  Sum_probs=87.1

Q ss_pred             ChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhh--hcCCCCCccCCCCCCcC--CCC-ccccccccccCCCcee
Q psy16828        276 SEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRT--HTRIRPTFECDVCHQIF--PTD-FRTKHMLVHDVEKSHL  350 (372)
Q Consensus       276 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~~C~~C~~~f--~~~-~l~~h~~~h~~~~~~~  350 (372)
                      +...|..|+++|++++||.|..|++.|.+...|..|+++  |.+.++.+.|+.|++.|  ... .|..|++.|++++||.
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            345677899999999999999999999999999999998  77777756799999998  555 8899999999999999


Q ss_pred             CcccCCcccChhhHHHHHhhcC
Q psy16828        351 CFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       351 C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |++|++.|.....|..|+++|+
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhC
Confidence            9999999999999999999864

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=2.2e-19  Score=128.84  Aligned_cols=92  Identities=24%  Similarity=0.508  Sum_probs=73.4

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHH
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNL  310 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  310 (372)
                      ..++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|++.|.++++|.|.+|++.|.+...|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            34566788888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHhhhcCCCCCcc
Q psy16828        311 HMRTHTRIRPTFE  323 (372)
Q Consensus       311 H~~~h~~~~~~~~  323 (372)
                      |+++|+++++ |.
T Consensus        92 H~~~H~~~~~-~~  103 (106)
T 2ee8_A           92 HKTLHMQTSS-PT  103 (106)
T ss_dssp             HHHHTTSCCC-CC
T ss_pred             HHHHhCCCCC-Cc
Confidence            8888887776 54

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.8e-19  Score=126.81  Aligned_cols=90  Identities=26%  Similarity=0.586  Sum_probs=74.6

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHH
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNL  310 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  310 (372)
                      +.++++|.|++|++.|.+...|..|++.|++.++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+.+.|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            45667788888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHhhhcCCCC
Q psy16828        311 HMRTHTRIRP  320 (372)
Q Consensus       311 H~~~h~~~~~  320 (372)
                      |+++|+++++
T Consensus        83 H~~~h~~~~~   92 (96)
T 2dmd_A           83 HLRSHTGDSG   92 (96)
T ss_dssp             HHTTCCSCCC
T ss_pred             HHHHhcCCCC
Confidence            8888887664

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=1.5e-19  Score=129.66  Aligned_cols=91  Identities=25%  Similarity=0.534  Sum_probs=82.2

Q ss_pred             hccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-cccc
Q psy16828        260 HLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTK  338 (372)
Q Consensus       260 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~  338 (372)
                      ..+++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++ |.|++|++.|... .|..
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP-FKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT-TSCSSSCCCCSSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC-eECCCcCCcccCHHHHHH
Confidence            3467899999999999999999999999999999999999999999999999999998888 9999999999776 8888


Q ss_pred             ccccccCCCceeC
Q psy16828        339 HMLVHDVEKSHLC  351 (372)
Q Consensus       339 h~~~h~~~~~~~C  351 (372)
                      |+++|+++++|.+
T Consensus        92 H~~~H~~~~~~~~  104 (106)
T 2ee8_A           92 HKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHTTSCCCCCC
T ss_pred             HHHHhCCCCCCcC
Confidence            9999999998865

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.78  E-value=2e-19  Score=124.96  Aligned_cols=87  Identities=26%  Similarity=0.674  Sum_probs=72.0

Q ss_pred             CCCCcccc--cccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHH
Q psy16828        233 NHKPYECY--ICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNL  310 (372)
Q Consensus       233 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  310 (372)
                      ++++|.|+  .|++.|.+...|..|++.|.+.++|.|++|++.|.+...|..|+++|+++++|.|+.|++.|.+.+.|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            35778887  5888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHhhhcCCC
Q psy16828        311 HMRTHTRIR  319 (372)
Q Consensus       311 H~~~h~~~~  319 (372)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            888887754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.77  E-value=3.2e-19  Score=121.59  Aligned_cols=82  Identities=30%  Similarity=0.630  Sum_probs=71.0

Q ss_pred             CcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhh
Q psy16828        236 PYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      ||.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            57888888888888888888888888888888888888888888999988888888899999999998899999998887


Q ss_pred             cC
Q psy16828        316 TR  317 (372)
Q Consensus       316 ~~  317 (372)
                      ++
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=5.6e-20  Score=134.05  Aligned_cols=101  Identities=14%  Similarity=0.191  Sum_probs=89.5

Q ss_pred             ChhhhHhhhhhhccCCCCcccccccccccccchHHhHHhh--hhccCcc-ccccccccc--CChHHHHHHHhhhcCCCCc
Q psy16828        219 KRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQ--VHLAQRF-ECKLCHKTI--VSEKTFKKHMALHSDAKPF  293 (372)
Q Consensus       219 ~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~  293 (372)
                      +...|..|+++ |.++++|.|++|++.|.+...|..|++.  +.+.+++ .|++|++.|  .....|..|+++|++++||
T Consensus         3 s~~~l~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGSI-FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCC-CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             cchhhhhheee-eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            34678889987 8899999999999999999999999998  6666655 499999988  8999999999999999999


Q ss_pred             ccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        294 VCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       294 ~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      .|++|++.|...+.|..|+++|+....
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            999999999999999999999887654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.77  E-value=1.2e-19  Score=123.79  Aligned_cols=81  Identities=41%  Similarity=0.815  Sum_probs=56.7

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCccccccccc
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVH  343 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~~h  343 (372)
                      ||.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|+                           
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~---------------------------   53 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT---------------------------   53 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHH---------------------------
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhc---------------------------
Confidence            35666666666666666666666666666666666666666666666655554                           


Q ss_pred             cCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        344 DVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       344 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                       ++++|.|+.|++.|.....|..|+++|+
T Consensus        54 -~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A           54 -GEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             -TCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             -CCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence             4567888888888888888888888875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.2e-19  Score=125.55  Aligned_cols=88  Identities=26%  Similarity=0.536  Sum_probs=67.6

Q ss_pred             hccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-cccc
Q psy16828        260 HLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTK  338 (372)
Q Consensus       260 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~  338 (372)
                      .++++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|++.++ |.|++|++.|... .|..
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP-FKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC-EECSSSSCEESSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHHHHH
Confidence            4567788888888888888888888888888888888888888888888888888777666 7777777777655 6666


Q ss_pred             ccccccCCCc
Q psy16828        339 HMLVHDVEKS  348 (372)
Q Consensus       339 h~~~h~~~~~  348 (372)
                      |++.|+++++
T Consensus        83 H~~~h~~~~~   92 (96)
T 2dmd_A           83 HLRSHTGDSG   92 (96)
T ss_dssp             HHTTCCSCCC
T ss_pred             HHHHhcCCCC
Confidence            7777766653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=3.1e-19  Score=128.94  Aligned_cols=84  Identities=30%  Similarity=0.554  Sum_probs=61.7

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-ccccccccccCCCceeCcccCCcccChhhH
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTKHMLVHDVEKSHLCFVCGAGFVNDAGL  364 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  364 (372)
                      .|+++++|.| .|++.|.+...|..|++.|++.++ |.|+.|++.|... .|..|++.|+++++|.|++|++.|.....|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcC-ccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            3566666777 677777777777777776666666 7777777777655 666677777777888888888888888888


Q ss_pred             HHHHhhc
Q psy16828        365 KVHMRKH  371 (372)
Q Consensus       365 ~~H~~~h  371 (372)
                      ..|+++|
T Consensus        82 ~~H~~~~   88 (110)
T 2csh_A           82 HRHVTSC   88 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHc
Confidence            8888876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.76  E-value=3.5e-19  Score=123.74  Aligned_cols=85  Identities=31%  Similarity=0.736  Sum_probs=57.5

Q ss_pred             cCccccc--ccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-cccc
Q psy16828        262 AQRFECK--LCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTK  338 (372)
Q Consensus       262 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~  338 (372)
                      +++|.|+  .|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|++.++ |.|+.|++.|... .|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC-ccCCCCCchhCCHHHHHH
Confidence            4677777  4888888888888888877777778888888888777778887777776655 5555555555444 4555


Q ss_pred             ccccccCCC
Q psy16828        339 HMLVHDVEK  347 (372)
Q Consensus       339 h~~~h~~~~  347 (372)
                      |+++|+|++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            555555543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=8e-19  Score=126.02  Aligned_cols=95  Identities=21%  Similarity=0.331  Sum_probs=82.0

Q ss_pred             hhhhhccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccch
Q psy16828        226 HERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLK  305 (372)
Q Consensus       226 H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  305 (372)
                      +++. |.++++|.|++|++.|.+...|..|++.|.  ++|.|++|++.|.....|..|+. |.+++||.|.+|++.|.+.
T Consensus         7 ~~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASP-VENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCC-CCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cCcc-cCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            3444 788899999999999999999999998873  68999999999999999999995 9999999999999999999


Q ss_pred             hhHHHHHh-hhcCCCCCccCC
Q psy16828        306 YYVNLHMR-THTRIRPTFECD  325 (372)
Q Consensus       306 ~~l~~H~~-~h~~~~~~~~C~  325 (372)
                      ..|..|++ .|.++++ |.|.
T Consensus        83 ~~L~~H~~~~H~~~~~-~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNM-APTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCC-CCCC
T ss_pred             HHHHHHHHHHcCCCCC-CCCC
Confidence            99999997 6666665 7654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=3e-18  Score=120.26  Aligned_cols=86  Identities=26%  Similarity=0.527  Sum_probs=72.8

Q ss_pred             cCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCC--CCcccCcccccccchhhHH
Q psy16828        232 ENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDA--KPFVCNICGKDFKLKYYVN  309 (372)
Q Consensus       232 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~  309 (372)
                      .++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|++.|+++  ++|.|+.|++.|.+.+.|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            46778888888888888888888888888888888888888888888888888888886  8888999999998888899


Q ss_pred             HHHh-hhcC
Q psy16828        310 LHMR-THTR  317 (372)
Q Consensus       310 ~H~~-~h~~  317 (372)
                      .|++ .|.+
T Consensus        83 ~H~~~~H~~   91 (95)
T 2yt9_A           83 GHIKQVHSG   91 (95)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhcCC
Confidence            9986 4443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.9e-18  Score=124.75  Aligned_cols=87  Identities=25%  Similarity=0.566  Sum_probs=82.4

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHH
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNL  310 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  310 (372)
                      |.++++|.| .|++.|.+...|..|++.|.+.++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+.+.|..
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            788999999 8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCC
Q psy16828        311 HMRTHTRI  318 (372)
Q Consensus       311 H~~~h~~~  318 (372)
                      |+++|+..
T Consensus        84 H~~~~~~~   91 (110)
T 2csh_A           84 HVTSCTKS   91 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHcccc
Confidence            99998754

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.1e-18  Score=122.54  Aligned_cols=85  Identities=31%  Similarity=0.625  Sum_probs=60.4

Q ss_pred             ccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCcccccc
Q psy16828        261 LAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHM  340 (372)
Q Consensus       261 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~  340 (372)
                      ++++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|++..                     
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---------------------   62 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV---------------------   62 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCC---------------------
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCC---------------------
Confidence            45677788888777777777778777777777777777777777777777777776541                     


Q ss_pred             ccccCCCceeCcccCCcccChhhHHHHHh-hc
Q psy16828        341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMR-KH  371 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h  371 (372)
                           +++|.|++|++.|.....|..|++ .|
T Consensus        63 -----~~~~~C~~C~~~f~~~~~L~~H~~~~H   89 (95)
T 2yt9_A           63 -----GKPYICQSCGKGFSRPDHLNGHIKQVH   89 (95)
T ss_dssp             -----CSSBCCSSSCCCBSSHHHHHHHHHHTS
T ss_pred             -----CCceECCCccchhCCHHHHHHHHHHhc
Confidence                 145666666666666666666664 44

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=7.3e-19  Score=126.24  Aligned_cols=93  Identities=19%  Similarity=0.331  Sum_probs=76.7

Q ss_pred             HhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-
Q psy16828        256 LNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-  334 (372)
Q Consensus       256 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-  334 (372)
                      ++.+.++++|.|++|++.|.+...|..|++.|.  ++|.|.+|++.|.....|..|+. |.++++ |.|++|++.|... 
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~-~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKK-LTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGG-GEEGGGTEECSSHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCC-ccCccccchhCCHH
Confidence            355677888899999999999999999988884  68889999999988888989985 777777 8888888888776 


Q ss_pred             ccccccc-cccCCCceeCc
Q psy16828        335 FRTKHML-VHDVEKSHLCF  352 (372)
Q Consensus       335 ~l~~h~~-~h~~~~~~~C~  352 (372)
                      .|..|++ .|.++++|.|.
T Consensus        84 ~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           84 SIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHcCCCCCCCCC
Confidence            7788886 88888888764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=6.6e-18  Score=105.57  Aligned_cols=58  Identities=29%  Similarity=0.542  Sum_probs=50.7

Q ss_pred             cCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        262 AQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       262 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      ++||.|.+|+++|...+.|..|+++|+|++||.|+.||++|.+.+.|..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6788999999999999999999999999999999999999999999999998887653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=6.2e-18  Score=117.06  Aligned_cols=82  Identities=28%  Similarity=0.596  Sum_probs=55.0

Q ss_pred             Ccccccc--cccccCChHHHHHHHhhhcCCCCcccC--cccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCcccc
Q psy16828        263 QRFECKL--CHKTIVSEKTFKKHMALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTK  338 (372)
Q Consensus       263 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~  338 (372)
                      .+|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|                       
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-----------------------   60 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH-----------------------   60 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHH-----------------------
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHc-----------------------
Confidence            3455655  666666666666666666555566664  3666665555555555544                       


Q ss_pred             ccccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        339 HMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       339 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                           +++++|.|+.|++.|.....|..|+++|.
T Consensus        61 -----~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           61 -----TGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             -----HCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             -----CCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence                 45567888889999999999999999884

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.69  E-value=2.4e-17  Score=114.04  Aligned_cols=82  Identities=23%  Similarity=0.528  Sum_probs=74.3

Q ss_pred             CCCccccc--ccccccccchHHhHHhhhhccCccccc--ccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHH
Q psy16828        234 HKPYECYI--CNKILVSRGRLNEHLNQVHLAQRFECK--LCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVN  309 (372)
Q Consensus       234 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  309 (372)
                      ..+|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++.|+++++|.|+.|++.|.+.+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45788988  999999999999999998888999997  59999999999999999999999999999999999999999


Q ss_pred             HHHhhh
Q psy16828        310 LHMRTH  315 (372)
Q Consensus       310 ~H~~~h  315 (372)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            999887

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=4e-17  Score=115.66  Aligned_cols=86  Identities=26%  Similarity=0.576  Sum_probs=73.6

Q ss_pred             cCCCCccccc--ccccccccchHHhHHhhhhccCccccc--ccccccCChHHHHHHHhhhcCCCCcccCcccccccchhh
Q psy16828        232 ENHKPYECYI--CNKILVSRGRLNEHLNQVHLAQRFECK--LCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYY  307 (372)
Q Consensus       232 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  307 (372)
                      ...++|.|.+  |++.|.+...|..|++.|.+.++|.|+  .|++.|.+...|..|++.|+++++|.|+.|++.|...+.
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            3456788886  888888888888888888888888996  599999999999999999998899999999999999999


Q ss_pred             HHHHHhhhcC
Q psy16828        308 VNLHMRTHTR  317 (372)
Q Consensus       308 l~~H~~~h~~  317 (372)
                      |..|+++|.+
T Consensus        91 l~~H~~~H~~  100 (100)
T 2ebt_A           91 LALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999888863

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=1.4e-17  Score=118.02  Aligned_cols=82  Identities=29%  Similarity=0.576  Sum_probs=54.2

Q ss_pred             Ccccccc--cccccCChHHHHHHHhhhcCCCCcccC--cccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCcccc
Q psy16828        263 QRFECKL--CHKTIVSEKTFKKHMALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTK  338 (372)
Q Consensus       263 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~  338 (372)
                      ++|.|.+  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|                       
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-----------------------   70 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH-----------------------   70 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHH-----------------------
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHh-----------------------
Confidence            4555664  666666666666666666666666664  3666666666666655554                       


Q ss_pred             ccccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        339 HMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       339 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                           +++++|.|++|++.|.....|..|+++|+
T Consensus        71 -----~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           71 -----TGAKPFQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             -----TSCCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             -----CCCCCeECCCCcCccCCHHHHHHHHHHhC
Confidence                 45567888888888888888888888875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.67  E-value=9.3e-18  Score=115.73  Aligned_cols=84  Identities=17%  Similarity=0.412  Sum_probs=75.8

Q ss_pred             CCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHh
Q psy16828        234 HKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMR  313 (372)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  313 (372)
                      ++||.|++|++.|.+.+.|..|++.|.++++|.|++|++.|.....|..|++.|++ .+|.|..|++.|.+...|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            46899999999999999999999999999999999999999999999999999885 78999999999999999999998


Q ss_pred             hhcCC
Q psy16828        314 THTRI  318 (372)
Q Consensus       314 ~h~~~  318 (372)
                      .+++.
T Consensus        80 ~~h~~   84 (88)
T 1llm_C           80 RLKKL   84 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.63  E-value=2.2e-16  Score=98.64  Aligned_cols=59  Identities=19%  Similarity=0.426  Sum_probs=54.1

Q ss_pred             CCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCC
Q psy16828        233 NHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      .|+||.|.+|++.|...+.|..|+++|.+++||.|++|+++|...++|..|+++|+|+.
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            37899999999999999999999999999999999999999999999999999998874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.63  E-value=2.7e-17  Score=113.37  Aligned_cols=79  Identities=20%  Similarity=0.439  Sum_probs=63.0

Q ss_pred             CcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCcccccccc
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLV  342 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~~  342 (372)
                      ++|.|++|++.|.+...|..|+++|.+++||.|+.|++.|...+.|..|+++|++                         
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-------------------------   56 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-------------------------   56 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-------------------------
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-------------------------
Confidence            5778888888888888888888888888888888888888888888888777763                         


Q ss_pred             ccCCCceeCcccCCcccChhhHHHHHhh
Q psy16828        343 HDVEKSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       343 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                          .+|.|+.|++.|.....|..|++.
T Consensus        57 ----~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C           57 ----LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CcchHHHHHHHHHHHhhhHHHHHH
Confidence                457788888888888888888875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.63  E-value=3.4e-16  Score=107.18  Aligned_cols=78  Identities=22%  Similarity=0.362  Sum_probs=66.9

Q ss_pred             Cccc--ccccccccccchHHhHHhhhhccCcccccc--cccccCChHHHHHHHhhhcCCCCcccCc---ccccccchhhH
Q psy16828        236 PYEC--YICNKILVSRGRLNEHLNQVHLAQRFECKL--CHKTIVSEKTFKKHMALHSDAKPFVCNI---CGKDFKLKYYV  308 (372)
Q Consensus       236 ~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  308 (372)
                      ||.|  +.|++.|.+.+.|..|++.|.++++|.|++  |++.|.+...|..|+++|++   |.|+.   |++.|.+.+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5778  788888888888888888888888888888  88888888888888888887   88888   88888888888


Q ss_pred             HHHHhhhc
Q psy16828        309 NLHMRTHT  316 (372)
Q Consensus       309 ~~H~~~h~  316 (372)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            88888775

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=7.7e-16  Score=103.73  Aligned_cols=70  Identities=24%  Similarity=0.549  Sum_probs=49.4

Q ss_pred             ccCcccccc--cccccCChHHHHHHHh-hhcCCCCcccCc--ccccccchhhHHHHHhhhcCCCCCccCCCCCCcC
Q psy16828        261 LAQRFECKL--CHKTIVSEKTFKKHMA-LHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIF  331 (372)
Q Consensus       261 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f  331 (372)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+.+.|..|+++|+++++ |.|++|++.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC-eeCCCCCCCC
Confidence            345666665  7777777777777776 577777777776  77777777777777777776666 7777776665

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.6e-16  Score=107.33  Aligned_cols=77  Identities=19%  Similarity=0.328  Sum_probs=40.3

Q ss_pred             HhHHhhhhccCcccccccccccCChHHHHHHHhhhcCC----CCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCC
Q psy16828        253 NEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDA----KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCH  328 (372)
Q Consensus       253 ~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~  328 (372)
                      ..|+++|.++++|.|.+|++.|.....|..|++.|++.    ++|.|..|++.|.....|..|+++|++.++ +.|..|+
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~~~~~~~   82 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG-VEGENSG   82 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS-CCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC-cccCCCC
Confidence            34444444555555555555555555555555444433    455555555555555555555555555554 5555554


Q ss_pred             Cc
Q psy16828        329 QI  330 (372)
Q Consensus       329 ~~  330 (372)
                      ..
T Consensus        83 ~~   84 (86)
T 1x6h_A           83 PS   84 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.61  E-value=2e-16  Score=108.41  Aligned_cols=78  Identities=22%  Similarity=0.370  Sum_probs=58.2

Q ss_pred             cccc--cccccccCChHHHHHHHhhhcCCCCcccCc--ccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCccccc
Q psy16828        264 RFEC--KLCHKTIVSEKTFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKH  339 (372)
Q Consensus       264 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h  339 (372)
                      ||.|  +.|++.|.+.+.|..|+++|.+++||.|+.  |++.|.+.+.|..|+++|++                      
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------------------   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----------------------   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----------------------
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----------------------
Confidence            4667  667777777777777777777777777766  77777777777777666653                      


Q ss_pred             cccccCCCceeCcc---cCCcccChhhHHHHHhhcC
Q psy16828        340 MLVHDVEKSHLCFV---CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       340 ~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~  372 (372)
                               |.|..   |++.|.....|..|+++|+
T Consensus        59 ---------~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 ---------YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ---------EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             ---------CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence                     56766   8888888999999998875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=8.3e-16  Score=103.58  Aligned_cols=72  Identities=31%  Similarity=0.608  Sum_probs=65.1

Q ss_pred             cCCCCccccc--ccccccccchHHhHHh-hhhccCcccccc--cccccCChHHHHHHHhhhcCCCCcccCccccccc
Q psy16828        232 ENHKPYECYI--CNKILVSRGRLNEHLN-QVHLAQRFECKL--CHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFK  303 (372)
Q Consensus       232 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  303 (372)
                      .++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|++++||.|.+|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4677888887  9999999999999998 688889999998  9999999999999999999999999999999884

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=104.87  Aligned_cols=80  Identities=24%  Similarity=0.439  Sum_probs=74.0

Q ss_pred             hhHhhhhhhccCCCCcccccccccccccchHHhHHhhhhcc----CcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        222 NVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLA----QRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       222 ~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      +|..|+++ |.++++|.|++|++.|.....|..|++.++..    ++|.|.+|++.|.....|..|+++|++++++.|..
T Consensus         2 s~~~H~~~-H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            2 SSGSSGRT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTTCCSTT-CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             Ccccccce-ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            46788888 89999999999999999999999999888776    78999999999999999999999999999999999


Q ss_pred             ccccc
Q psy16828        298 CGKDF  302 (372)
Q Consensus       298 C~~~f  302 (372)
                      |+..|
T Consensus        81 ~~~~~   85 (86)
T 1x6h_A           81 SGPSS   85 (86)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.58  E-value=3.9e-16  Score=116.00  Aligned_cols=81  Identities=22%  Similarity=0.354  Sum_probs=63.1

Q ss_pred             CCccccccccccc------ccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhH
Q psy16828        235 KPYECYICNKILV------SRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYV  308 (372)
Q Consensus       235 ~~~~C~~C~~~f~------~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  308 (372)
                      +++.|++|...|.      ....|..|+ .++++++|.|++|++.|.....|..|+++|  ++||.|+.|++.|...+.|
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHH
Confidence            4455666555544      345555565 577888888888998888888899998888  7888999999999989999


Q ss_pred             HHHHhhhcCC
Q psy16828        309 NLHMRTHTRI  318 (372)
Q Consensus       309 ~~H~~~h~~~  318 (372)
                      ..|+++|++.
T Consensus       117 ~~H~~~h~~~  126 (129)
T 2wbt_A          117 LDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHHCCc
Confidence            9998888865

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.6e-15  Score=99.76  Aligned_cols=64  Identities=30%  Similarity=0.568  Sum_probs=46.1

Q ss_pred             hccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        260 HLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       260 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      .++++|.|++|++.|.....|..|+++|.++++|.|++|++.|...+.|..|+++|+++++ |.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p-~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP-SSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCC-CCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            3456677777777777777777777777777777777777777777777777777777666 655

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=9.3e-15  Score=101.68  Aligned_cols=74  Identities=19%  Similarity=0.354  Sum_probs=66.1

Q ss_pred             ccccccchHHhHHhhhhccCccccccccccc-CChHHHHHHHhhhcCCCCcccCcccccccchhhHHHH-HhhhcCC
Q psy16828        244 KILVSRGRLNEHLNQVHLAQRFECKLCHKTI-VSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLH-MRTHTRI  318 (372)
Q Consensus       244 ~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  318 (372)
                      ..|...+.+..|.+.+.++++|.|++|++.| .+...|..|+++| +++||.|.+|++.|...+.|..| +++|.+.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            4567778888999999999999999999999 9999999999999 99999999999999999999999 7777653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=2.1e-15  Score=105.88  Aligned_cols=75  Identities=23%  Similarity=0.365  Sum_probs=60.8

Q ss_pred             ccccchHHhHHhhhhccCcccccccccccC-ChHHHHHHHhhhcC-CCCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        246 LVSRGRLNEHLNQVHLAQRFECKLCHKTIV-SEKTFKKHMALHSD-AKPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       246 f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      +.....+..|++.|.++++|.|.+|++.|. ....|..|+++|++ +++|.|.+|++.|.+.+.|..|+++|+++++
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            445556677788888888888888888888 88888888888887 8888888888888888888888888887776

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.1e-14  Score=97.35  Aligned_cols=65  Identities=18%  Similarity=0.442  Sum_probs=61.9

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCccc
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC  295 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  295 (372)
                      +.++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            66789999999999999999999999999999999999999999999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.51  E-value=1.9e-14  Score=95.35  Aligned_cols=61  Identities=28%  Similarity=0.690  Sum_probs=46.5

Q ss_pred             hccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        260 HLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       260 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      .++++|+|.+|++.|.+...|..|+++|.++++|.|.+|++.|...+.|..|+++|++++|
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            4556777777777777777777777777777777787788887777777778777777665

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=7.6e-15  Score=102.52  Aligned_cols=68  Identities=21%  Similarity=0.337  Sum_probs=47.2

Q ss_pred             hccCcccccccccccCChHHHHHHHh-hh---cCCCCcccCcccccccchhhHHHH-HhhhcCCCCCccCCCCC
Q psy16828        260 HLAQRFECKLCHKTIVSEKTFKKHMA-LH---SDAKPFVCNICGKDFKLKYYVNLH-MRTHTRIRPTFECDVCH  328 (372)
Q Consensus       260 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~~C~~C~  328 (372)
                      .+++||.|++|++.|...+.|..|++ .|   .+++||.|..||+.|...+.|..| +++|.+++| |.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekp-y~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEEN-FKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCC-EEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCC-eeCCccc
Confidence            35566777777777777777777776 36   456777777777777777777777 677777666 7776643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.8e-14  Score=94.40  Aligned_cols=62  Identities=23%  Similarity=0.401  Sum_probs=53.4

Q ss_pred             hhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        259 VHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       259 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      +.++++|.|++|++.|.+...|..|+++|.++++|.|.+|++.|...+.|..|+++|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            45677888888888888888888888888888889999999999999999999988888776

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=1.9e-14  Score=90.09  Aligned_cols=57  Identities=25%  Similarity=0.490  Sum_probs=48.3

Q ss_pred             ccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcC
Q psy16828        261 LAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       261 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ++++|.|++|++.|.+...|..|+++|++++||.|+.|++.|...+.|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            356889999999999999999999999999999999999999999999999998873

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.50  E-value=1.9e-15  Score=112.31  Aligned_cols=109  Identities=17%  Similarity=0.234  Sum_probs=65.9

Q ss_pred             ccCCCCcccccccccccccchHHhHH---hhhhccCcccccccccccC------ChHHHHHHHhhhcCCCCcccCccccc
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHL---NQVHLAQRFECKLCHKTIV------SEKTFKKHMALHSDAKPFVCNICGKD  301 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~---~~~~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~  301 (372)
                      +.+.++|.|...+...  ...+..+.   .....++++.|++|...|.      ....|..|+ .|++++||.|++|++.
T Consensus         7 ~~~~k~~~~~~k~~~~--~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~   83 (129)
T 2wbt_A            7 DSGSKKYLSNHKGIFI--HVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMP   83 (129)
T ss_dssp             CTTCCGGGGCSSCEEE--ECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCE
T ss_pred             cccccccccccCCeee--eecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcc
Confidence            5677777776654332  22233332   2223445677888776665      455666666 5778888888888888


Q ss_pred             ccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-ccccccccccC
Q psy16828        302 FKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTKHMLVHDV  345 (372)
Q Consensus       302 f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~h~~~h~~  345 (372)
                      |...+.|..|+++|  .++ |.|+.|++.|... .|..|++.|+|
T Consensus        84 f~~~~~l~~H~~~H--~~~-~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           84 FSSSVSLKQHIRYT--EHT-KVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             ESSHHHHHHHHHHT--CCC-CBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             cCCHhHHHHHHHHC--CCC-CCCCCCCcccCCHHHHHHHHHHHCC
Confidence            88888888888877  444 5555554444443 44444444443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.2e-14  Score=94.45  Aligned_cols=63  Identities=25%  Similarity=0.436  Sum_probs=52.5

Q ss_pred             hhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        257 NQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       257 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      +.|.++++|.|++|++.|.....|..|++.|.+++||.|++|++.|.....|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            356677888888888888888888888888888888888888888888888888888887654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.5e-14  Score=101.01  Aligned_cols=70  Identities=16%  Similarity=0.324  Sum_probs=62.5

Q ss_pred             ccCCCCcccccccccccccchHHhHHhh-h---hccCcccccccccccCChHHHHHH-HhhhcCCCCcccCcccc
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQ-V---HLAQRFECKLCHKTIVSEKTFKKH-MALHSDAKPFVCNICGK  300 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  300 (372)
                      -.+++||.|+.|++.|...+.|..|++. |   .++++|.|.+|++.|...+.|..| +++|++++||.|.++..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            5678999999999999999999999974 6   467899999999999999999999 89999999999987553

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.4e-14  Score=96.87  Aligned_cols=68  Identities=21%  Similarity=0.407  Sum_probs=52.9

Q ss_pred             HHhHHhhhhccCcccccccccccCChHHHHHHHh-hhcCC-CCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        252 LNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMA-LHSDA-KPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       252 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      +..|++.|.++++|.|++|++.|.....|..|++ .|.++ ++|.|+.|++.|...+.|..|++++++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            3456677777778888888888888888888886 56654 78888888888888888888888877654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=2.5e-14  Score=100.41  Aligned_cols=79  Identities=18%  Similarity=0.265  Sum_probs=70.5

Q ss_pred             hcChhhhHhhhhhhccCCCCccccccccccc-ccchHHhHHhhhhc-cCcccccccccccCChHHHHHHHhhhcCCCCcc
Q psy16828        217 FTKRMNVKTHERMKHENHKPYECYICNKILV-SRGRLNEHLNQVHL-AQRFECKLCHKTIVSEKTFKKHMALHSDAKPFV  294 (372)
Q Consensus       217 f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  294 (372)
                      +.....+..|+++ |.++++|.|++|++.|. ....|..|++.|++ +++|.|.+|++.|.....|..|++.|++++|+.
T Consensus         6 ~~~~~~~~~h~~~-h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            6 SGPGGPEEQWQRA-IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCSCSHHHHT-TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCcHHHHHHH-hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            4455667888887 89999999999999999 99999999999998 899999999999999999999999999998865


Q ss_pred             cC
Q psy16828        295 CN  296 (372)
Q Consensus       295 C~  296 (372)
                      -.
T Consensus        85 ~~   86 (98)
T 2gqj_A           85 AE   86 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.46  E-value=5.6e-14  Score=93.08  Aligned_cols=63  Identities=25%  Similarity=0.590  Sum_probs=58.7

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCc
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPF  293 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  293 (372)
                      +.++++|.|+.|++.|.+...|..|++.|.++++|+|.+|++.|.....|..|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            677889999999999999999999999999999999999999999999999999999999886

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.8e-16  Score=103.03  Aligned_cols=70  Identities=14%  Similarity=0.115  Sum_probs=58.3

Q ss_pred             hHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC-ccccccccccCCCceeCccc
Q psy16828        277 EKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD-FRTKHMLVHDVEKSHLCFVC  354 (372)
Q Consensus       277 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~-~l~~h~~~h~~~~~~~C~~C  354 (372)
                      .+.|..|+++|.+++||.|.+|++.|.+.+.|..       .++ |.|+.|++.|... .|..|++.|++++||.|++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~-~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKT-PMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSS-CCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCC-CCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3456778888888889999999999988887776       455 9999999999776 88889999999999999887

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.46  E-value=7.2e-14  Score=87.37  Aligned_cols=56  Identities=27%  Similarity=0.621  Sum_probs=49.6

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      ||.|++|++.|.+...|..|+++|++++||.|+.|++.|.+.+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57899999999999999999999999999999999999999999999998888764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=6.1e-14  Score=94.33  Aligned_cols=60  Identities=22%  Similarity=0.408  Sum_probs=49.7

Q ss_pred             hhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhh-hcC
Q psy16828        258 QVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRT-HTR  317 (372)
Q Consensus       258 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~  317 (372)
                      .+.+.++|.|++|++.|.+...|..|+++|++++||.|.+|++.|...+.|..|++. |.+
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            344567788999999999999999999999999999999999999999999999754 444

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=4.7e-14  Score=91.21  Aligned_cols=60  Identities=22%  Similarity=0.507  Sum_probs=50.9

Q ss_pred             hhhccCcccccccccccCChHHHHHHHhh-h-cCCCCcccCcccccccchhhHHHHHhhhcC
Q psy16828        258 QVHLAQRFECKLCHKTIVSEKTFKKHMAL-H-SDAKPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       258 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      .|.++++|.|++|++.|.+...|..|++. | .+++||.|+.|++.|.+.+.|..|++++++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45677888888888888888888888887 6 578889999999999999999999888875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2e-13  Score=94.85  Aligned_cols=76  Identities=18%  Similarity=0.260  Sum_probs=59.9

Q ss_pred             hhcChhhhHhhhhhhccCCCCcccccccccc-cccchHHhHHhhhhccCcccccccccccCChHHHHHH-HhhhcCCCCc
Q psy16828        216 TFTKRMNVKTHERMKHENHKPYECYICNKIL-VSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKH-MALHSDAKPF  293 (372)
Q Consensus       216 ~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~  293 (372)
                      .|.....|..|.+. +.++++|.|+.|++.| .+...|..|++.| ++++|.|.+|++.|.....|..| +++|++...+
T Consensus        15 ~~~~~~~~~~~~~~-~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           15 VYAAGSLEEQWYLE-IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             SSCTTCHHHHHHHH-HHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCchHHHHHHHH-hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            45566667777776 6777888888888888 7888888888888 88888888888888888888888 7788754333

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.9e-13  Score=89.40  Aligned_cols=63  Identities=19%  Similarity=0.290  Sum_probs=56.9

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCc
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPF  293 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  293 (372)
                      |.++++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.....|..|++.|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            677889999999999999999999999998999999999999999999999999999988764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.4e-13  Score=89.40  Aligned_cols=61  Identities=23%  Similarity=0.486  Sum_probs=57.1

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCC
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      |.++++|.|++|++.|.....|..|++.|.++++|+|++|++.|.....|..|+++|+++.
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            8889999999999999999999999999999999999999999999999999999998764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4e-13  Score=84.88  Aligned_cols=56  Identities=23%  Similarity=0.687  Sum_probs=48.4

Q ss_pred             CcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHH-hhhcCC
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHM-RTHTRI  318 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  318 (372)
                      ++|.|++|++.|.+...|..|+++|++++||.|+.|++.|.+.+.|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46889999999999999999999999999999999999999999999997 455543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=8.5e-13  Score=88.06  Aligned_cols=71  Identities=24%  Similarity=0.375  Sum_probs=58.2

Q ss_pred             cccccCCCCCCCCccccCcccccccchhHHhhhhhccCcCCCCccCCCCCCCCcchhhHHHhhhhccCCCCCCCCeeccc
Q psy16828          8 DTEAIEPKPSKYIKVECPVCGKVLSRKSKLVSHMRSFHTSVTPEAGGDNNDTSGHMSQIQTMLMLDHKKPKSRAPVECSY   87 (372)
Q Consensus         8 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~   87 (372)
                      ++.+|+++|++.++|.|+.|++.|.+...|..|++..|.+.                               .++|.|.+
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~-------------------------------~~~~~C~~   50 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN-------------------------------VAKFHCPH   50 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS-------------------------------CSSEECSS
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC-------------------------------CCccCCCC
Confidence            67789999999999999999999999999999987556431                               15688999


Q ss_pred             ccccccChhHHHHHHHhhccCc
Q psy16828         88 CGKVLSRKDKLTRHIAAVHSGK  109 (372)
Q Consensus        88 C~~~~~~~~~l~~H~~~~h~~~  109 (372)
                      |++.|.....|..|+..+|...
T Consensus        51 C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           51 CDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             SSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCCccCCHHHHHHHHHHhCCCC
Confidence            9998888888888888777654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=4e-15  Score=98.55  Aligned_cols=71  Identities=18%  Similarity=0.302  Sum_probs=43.6

Q ss_pred             hhhhHhhhhhhccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        220 RMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       220 ~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      ...|..|+++ |.++++|.|++|++.|.+.+.|..       +++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 ~~~l~~H~~~-h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKI-HLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCC-CCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHH-hCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3456667666 677777777777777776666544       4455555555555555555555555555555555554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.37  E-value=4.4e-13  Score=90.10  Aligned_cols=61  Identities=28%  Similarity=0.549  Sum_probs=55.1

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHH-hhhcCCC
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHM-ALHSDAK  291 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  291 (372)
                      +.+.++|.|++|++.|.....|..|++.|++++||.|++|+++|.....|..|+ +.|.+++
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            566788999999999999999999999999999999999999999999999997 5687764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=4.7e-13  Score=89.58  Aligned_cols=61  Identities=23%  Similarity=0.414  Sum_probs=48.1

Q ss_pred             hhccCcccccccccccCChHHHHHHHhhhcC---CCCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        259 VHLAQRFECKLCHKTIVSEKTFKKHMALHSD---AKPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       259 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      |.++++|.|.+|++.|.....|..|+++|.+   +++|.|.+|++.|...+.|..|++.++...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            4567788888888888888888888888875   788888888888888888888886555433

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.35  E-value=5.8e-13  Score=83.16  Aligned_cols=56  Identities=23%  Similarity=0.490  Sum_probs=44.1

Q ss_pred             CCCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhc
Q psy16828        233 NHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHS  288 (372)
Q Consensus       233 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  288 (372)
                      ++++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.....|..|++.|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            35678888888888888888888888888888888888888888888888888775

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.33  E-value=1.1e-12  Score=81.80  Aligned_cols=56  Identities=20%  Similarity=0.431  Sum_probs=47.2

Q ss_pred             CcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCC
Q psy16828        236 PYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       236 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      ||.|++|++.|.+.+.|..|++.|.++++|.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57888888888888888888888888888888888888888888888888887764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.2e-12  Score=86.28  Aligned_cols=55  Identities=27%  Similarity=0.710  Sum_probs=36.4

Q ss_pred             ccCccccc--ccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhh
Q psy16828        261 LAQRFECK--LCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       261 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      ++++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|...+.|..|+++|
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            44556665  36666666666666666666666777777777777777777776665

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.2e-12  Score=86.27  Aligned_cols=68  Identities=16%  Similarity=0.455  Sum_probs=59.9

Q ss_pred             hhhHhhhhhhccCCCCcccc--cccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhc
Q psy16828        221 MNVKTHERMKHENHKPYECY--ICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHS  288 (372)
Q Consensus       221 ~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  288 (372)
                      ..|..|....+.++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|...+.|..|+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45667777779999999997  599999999999999999999999999999999999999999999874

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=3.1e-12  Score=89.17  Aligned_cols=61  Identities=26%  Similarity=0.371  Sum_probs=48.1

Q ss_pred             cccccccccccCChHHHHHHHhh-hcCCCC--------cccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMAL-HSDAKP--------FVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      .+.|+.|++.|.+...|..|++. |.++++        |.|..|++.|.....|..|+++|+++++ |.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS-GPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC-CSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            35688888888888888888877 777766        7888888888888888888888887777 7775

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.2e-12  Score=84.37  Aligned_cols=59  Identities=15%  Similarity=0.491  Sum_probs=49.8

Q ss_pred             ccCCCCcccccccccccccchHHhHHhh-h-hccCcccccccccccCChHHHHHHHhhhcC
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQ-V-HLAQRFECKLCHKTIVSEKTFKKHMALHSD  289 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  289 (372)
                      |.++++|.|+.|++.|.+.+.|..|++. | .++++|.|++|++.|.+.+.|..|++.|++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            7788888888888888888888888887 4 377888888888888888888888888765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.7e-12  Score=82.70  Aligned_cols=58  Identities=19%  Similarity=0.303  Sum_probs=51.2

Q ss_pred             ccCcccccccccccCChHHHHHHHhhhcCCCCcccC-cccccccchhhHHHHHhhhcCCCC
Q psy16828        261 LAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN-ICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       261 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      +.++|.|.+|++.|. .+.|..|+++ .+++||.|+ .|++.|...+.|..|+++|...++
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            457889999999999 9999999988 899999999 999999999999999998877654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3.9e-12  Score=85.02  Aligned_cols=65  Identities=22%  Similarity=0.312  Sum_probs=56.4

Q ss_pred             ccCCCCcccccccccccccchHHhHHhhhhc---cCcccccccccccCChHHHHHHH-hhhcCCCCccc
Q psy16828        231 HENHKPYECYICNKILVSRGRLNEHLNQVHL---AQRFECKLCHKTIVSEKTFKKHM-ALHSDAKPFVC  295 (372)
Q Consensus       231 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C  295 (372)
                      |.++++|.|.+|++.|.....|..|++.|++   +++|.|.+|++.|.....|..|+ ..|.++.+..-
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            6788999999999999999999999999886   78999999999999999999999 56766666543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=6.5e-12  Score=79.19  Aligned_cols=56  Identities=18%  Similarity=0.572  Sum_probs=46.2

Q ss_pred             CCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHH-hhhcCC
Q psy16828        235 KPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHM-ALHSDA  290 (372)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  290 (372)
                      +||.|++|++.|.+.+.|..|++.|.++++|.|++|++.|.+...|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46888888888888888888888888888888888888888888888886 567654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=1.2e-11  Score=86.16  Aligned_cols=62  Identities=15%  Similarity=0.166  Sum_probs=52.9

Q ss_pred             CCcccccccccccccchHHhHHhh-hhccCc--------ccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        235 KPYECYICNKILVSRGRLNEHLNQ-VHLAQR--------FECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       235 ~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      ..+.|+.|++.|.+...|..|++. |.+.++        |.|++|++.|.....|..|+++|++++||.|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            346788888888888888888877 666655        89999999999999999999999999999986

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.21  E-value=4.4e-12  Score=75.13  Aligned_cols=44  Identities=27%  Similarity=0.415  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC-SSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 776665

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.2e-12  Score=75.22  Aligned_cols=44  Identities=25%  Similarity=0.526  Sum_probs=32.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC-SCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC-CCCCCC
Confidence            56667777777777777777777777777777777766 777665

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.6e-12  Score=74.68  Aligned_cols=44  Identities=27%  Similarity=0.383  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC-CSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 776665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.20  E-value=4.9e-12  Score=74.95  Aligned_cols=44  Identities=18%  Similarity=0.229  Sum_probs=31.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC-SCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCC-cCCCCC
Confidence            55667777777777777777777777777777766666 777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.4e-12  Score=75.14  Aligned_cols=44  Identities=27%  Similarity=0.378  Sum_probs=31.5

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCT-TSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7e-12  Score=74.25  Aligned_cols=44  Identities=23%  Similarity=0.412  Sum_probs=32.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT-SGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC-CCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777777766 777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5e-12  Score=74.09  Aligned_cols=44  Identities=32%  Similarity=0.489  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.++++ |.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCS-CSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            45567777777777777777777777777777777666 777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.20  E-value=5.1e-12  Score=74.85  Aligned_cols=44  Identities=25%  Similarity=0.368  Sum_probs=31.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC-CSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.2e-12  Score=74.82  Aligned_cols=44  Identities=27%  Similarity=0.435  Sum_probs=30.9

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH-SGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS-CCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 666665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.6e-12  Score=74.69  Aligned_cols=44  Identities=25%  Similarity=0.514  Sum_probs=31.6

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP-SGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC-SSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            56667777777777777777777777777777777666 777665

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.20  E-value=6.3e-12  Score=74.45  Aligned_cols=44  Identities=30%  Similarity=0.474  Sum_probs=33.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS-CSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            56677777777777777777777777777777777776 777766

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.4e-12  Score=75.14  Aligned_cols=44  Identities=27%  Similarity=0.448  Sum_probs=31.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSC-CSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.2e-12  Score=75.22  Aligned_cols=44  Identities=23%  Similarity=0.474  Sum_probs=32.9

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC-SSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            56677777777777777777777777777777777766 777765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.19  E-value=4.6e-12  Score=75.05  Aligned_cols=44  Identities=30%  Similarity=0.518  Sum_probs=31.5

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCC-SCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            56667777777777777777777777777777776666 777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.3e-12  Score=74.47  Aligned_cols=44  Identities=23%  Similarity=0.309  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC-CCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 666665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.6e-12  Score=75.07  Aligned_cols=44  Identities=30%  Similarity=0.496  Sum_probs=31.1

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|.+|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCC-SCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.4e-12  Score=74.72  Aligned_cols=44  Identities=27%  Similarity=0.428  Sum_probs=30.1

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC-SCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55666677777777777777777777777777666666 666655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.6e-12  Score=74.70  Aligned_cols=44  Identities=27%  Similarity=0.417  Sum_probs=31.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP-SGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC-SCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.6e-12  Score=74.38  Aligned_cols=44  Identities=30%  Similarity=0.472  Sum_probs=30.5

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCS-CSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55666777777777777777777777777777766666 666665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.7e-12  Score=74.99  Aligned_cols=44  Identities=32%  Similarity=0.450  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCC-SSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55667777777777777777777777777777766666 766665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.9e-12  Score=74.57  Aligned_cols=44  Identities=32%  Similarity=0.536  Sum_probs=30.9

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC-CSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777766666 666665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.6e-12  Score=74.10  Aligned_cols=44  Identities=32%  Similarity=0.407  Sum_probs=30.9

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC-CSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 766665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.2e-12  Score=73.97  Aligned_cols=44  Identities=34%  Similarity=0.508  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC-CSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            56667777777777777777777777777777776666 777665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.6e-12  Score=74.10  Aligned_cols=44  Identities=32%  Similarity=0.474  Sum_probs=29.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|.+.+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS-SSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55666666777777777777777777777666666666 666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=7.5e-12  Score=74.12  Aligned_cols=44  Identities=25%  Similarity=0.382  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCC-SSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.8e-12  Score=74.03  Aligned_cols=44  Identities=30%  Similarity=0.397  Sum_probs=31.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP-SGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC-CCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777777666 777665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.7e-12  Score=74.07  Aligned_cols=44  Identities=30%  Similarity=0.449  Sum_probs=30.8

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC-CCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777766666 666665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.18  E-value=8e-12  Score=74.02  Aligned_cols=44  Identities=25%  Similarity=0.441  Sum_probs=32.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP-SGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC-CSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            56667777777777777777777777777777777666 777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.1e-12  Score=74.22  Aligned_cols=44  Identities=25%  Similarity=0.378  Sum_probs=29.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCC-SCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55566666777777777777777777777766666666 666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.7e-12  Score=73.83  Aligned_cols=44  Identities=34%  Similarity=0.582  Sum_probs=30.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS-SCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            45666677777777777777777777777777666666 666665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.8e-12  Score=74.31  Aligned_cols=45  Identities=24%  Similarity=0.386  Sum_probs=32.1

Q ss_pred             HHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       282 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      .|+++|++++||.|.+|++.|.+.+.|..|+++|.++++ |.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS-SCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            356667777777777777777777777777777777666 777665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.3e-12  Score=73.92  Aligned_cols=44  Identities=32%  Similarity=0.472  Sum_probs=31.8

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC-SCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            56667777777777777777777777777777776666 777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.4e-12  Score=73.90  Aligned_cols=44  Identities=30%  Similarity=0.523  Sum_probs=31.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCS-CCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            56667777777777777777777777777777776666 777665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.6e-12  Score=74.10  Aligned_cols=44  Identities=32%  Similarity=0.440  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSC-SSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.5e-12  Score=73.89  Aligned_cols=44  Identities=34%  Similarity=0.486  Sum_probs=30.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.++++ |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCS-SCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCC-CCCCCC
Confidence            55666677777777777777777777777777766666 666665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.7e-12  Score=74.34  Aligned_cols=44  Identities=30%  Similarity=0.420  Sum_probs=32.9

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCC-SCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            56677777777777777777777777777777777776 777765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.8e-12  Score=73.82  Aligned_cols=44  Identities=27%  Similarity=0.346  Sum_probs=32.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCC-SCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            56667777777777777777777777777777777766 777665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=6.9e-12  Score=74.28  Aligned_cols=44  Identities=23%  Similarity=0.296  Sum_probs=30.6

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC-SGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS-SCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55666777777777777777777777777777766666 666665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.3e-12  Score=74.16  Aligned_cols=44  Identities=27%  Similarity=0.565  Sum_probs=30.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS-SCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC-CCCCCC
Confidence            55666777777777777777777777777777766666 666665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.1e-11  Score=73.47  Aligned_cols=44  Identities=18%  Similarity=0.096  Sum_probs=31.6

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.++++ |.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN-SGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC-CCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55667777777777777777777777777777777666 777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.1e-11  Score=73.43  Aligned_cols=44  Identities=30%  Similarity=0.431  Sum_probs=31.6

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|.+|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSC-CSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.9e-12  Score=74.92  Aligned_cols=44  Identities=27%  Similarity=0.475  Sum_probs=29.1

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS-SCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55566666666666666666666666666666666665 666655

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.7e-12  Score=73.62  Aligned_cols=44  Identities=36%  Similarity=0.519  Sum_probs=31.1

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC-SSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC-CCCCCC
Confidence            55667777777777777777777777777777776666 777665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.4e-12  Score=73.69  Aligned_cols=44  Identities=25%  Similarity=0.394  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCC-CCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            56667777777777777777777777777777776666 776654

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=1.6e-11  Score=72.70  Aligned_cols=44  Identities=27%  Similarity=0.435  Sum_probs=31.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC-CSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            45667777777777777777777777777777777666 777665

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.14  E-value=3.2e-11  Score=79.14  Aligned_cols=55  Identities=31%  Similarity=0.570  Sum_probs=46.6

Q ss_pred             ccCcccccc--cccccCChHHHHHHHhhhcCCCCcccCc--ccccccchhhHHHHHhhh
Q psy16828        261 LAQRFECKL--CHKTIVSEKTFKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       261 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  315 (372)
                      ..++|.|.+  |++.|.....|..|++.|++++||.|.+  |++.|.....|..|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            456788888  8888888899999999998899999965  999999999999998765

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.3e-11  Score=73.00  Aligned_cols=44  Identities=27%  Similarity=0.426  Sum_probs=31.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL-SGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCC-CCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            45667777777777777777777777777777777666 777665

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.14  E-value=1.6e-11  Score=72.61  Aligned_cols=45  Identities=20%  Similarity=0.280  Sum_probs=36.7

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777888888888888888888888888888888888876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=72.66  Aligned_cols=44  Identities=16%  Similarity=0.289  Sum_probs=37.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            56677778888888888888888888889888888888988877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=72.63  Aligned_cols=44  Identities=16%  Similarity=0.275  Sum_probs=36.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777888888888888888888888888888888888876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.13  E-value=1.7e-11  Score=72.56  Aligned_cols=44  Identities=14%  Similarity=0.227  Sum_probs=37.3

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            56677778888888888888888888888888888888888877

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.7e-11  Score=72.56  Aligned_cols=44  Identities=25%  Similarity=0.280  Sum_probs=36.7

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=72.66  Aligned_cols=44  Identities=16%  Similarity=0.253  Sum_probs=36.3

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56667777888888888888888888888888888888888876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.9e-11  Score=72.29  Aligned_cols=45  Identities=18%  Similarity=0.341  Sum_probs=37.0

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667778888888888888888888888888888888888876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.12  E-value=1.8e-11  Score=72.40  Aligned_cols=44  Identities=18%  Similarity=0.319  Sum_probs=36.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=72.53  Aligned_cols=44  Identities=27%  Similarity=0.357  Sum_probs=30.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHh-hhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMR-THTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|++|++.|...+.|..|++ +|.++++ |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~-~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP-SGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS-SSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC-CCCCCC
Confidence            5566677777777777777777777777776 6666666 666655

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.8e-11  Score=72.39  Aligned_cols=44  Identities=23%  Similarity=0.330  Sum_probs=37.3

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888888876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.7e-11  Score=72.49  Aligned_cols=44  Identities=20%  Similarity=0.323  Sum_probs=35.7

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.7e-11  Score=72.55  Aligned_cols=44  Identities=16%  Similarity=0.264  Sum_probs=37.2

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888888877

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.5e-11  Score=72.81  Aligned_cols=44  Identities=16%  Similarity=0.229  Sum_probs=35.8

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777888888888888888888888888888888888876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2e-11  Score=72.22  Aligned_cols=44  Identities=11%  Similarity=0.149  Sum_probs=36.1

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56667777888888888888888888888888888888888876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.6e-11  Score=72.65  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=35.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.12  E-value=1.6e-11  Score=72.71  Aligned_cols=45  Identities=18%  Similarity=0.196  Sum_probs=37.8

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356677788888888888888888888888888888888888877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.6e-11  Score=72.64  Aligned_cols=44  Identities=16%  Similarity=0.262  Sum_probs=36.8

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=72.17  Aligned_cols=45  Identities=16%  Similarity=0.226  Sum_probs=37.2

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356677778888888888888888888888888888888888877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.9e-11  Score=71.57  Aligned_cols=44  Identities=20%  Similarity=0.268  Sum_probs=35.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44566777888888888888888888888888888888888876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.2e-11  Score=72.06  Aligned_cols=45  Identities=18%  Similarity=0.232  Sum_probs=37.2

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677778888888888888888888888888888888888876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.8e-11  Score=72.40  Aligned_cols=44  Identities=14%  Similarity=0.239  Sum_probs=36.7

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.6e-11  Score=72.60  Aligned_cols=45  Identities=13%  Similarity=0.248  Sum_probs=36.9

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356677778888888888888888888888888888888888876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2e-11  Score=72.21  Aligned_cols=44  Identities=16%  Similarity=0.201  Sum_probs=35.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=72.11  Aligned_cols=44  Identities=16%  Similarity=0.281  Sum_probs=36.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=5.8e-11  Score=72.84  Aligned_cols=45  Identities=36%  Similarity=0.630  Sum_probs=26.4

Q ss_pred             hcCCCCcccCcccccccchhhHHHHHh-hhcCCCCCccCCCCCCcCC
Q psy16828        287 HSDAKPFVCNICGKDFKLKYYVNLHMR-THTRIRPTFECDVCHQIFP  332 (372)
Q Consensus       287 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~C~~C~~~f~  332 (372)
                      |.+++||.|.+|++.|.....|..|++ +|.++++ |.|++|++.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~-~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPS   52 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSSSCCSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCC-ccCCCCCCCCC
Confidence            445566666666666666666666654 5555555 55555555554

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=71.75  Aligned_cols=44  Identities=18%  Similarity=0.251  Sum_probs=36.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667778888888888888888888888888888888888876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.7e-11  Score=72.50  Aligned_cols=45  Identities=13%  Similarity=0.124  Sum_probs=35.7

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            356667777788888888888888888888888888888888776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=71.49  Aligned_cols=44  Identities=23%  Similarity=0.232  Sum_probs=36.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55667778888888888888888888888888888888888876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=72.29  Aligned_cols=44  Identities=16%  Similarity=0.279  Sum_probs=35.8

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.3e-11  Score=78.23  Aligned_cols=59  Identities=17%  Similarity=0.312  Sum_probs=47.3

Q ss_pred             cCCCCcccccccccccccchHHhHHhhhhccCccccc-ccccccCChHHHHHHHhhhcCCCC
Q psy16828        232 ENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECK-LCHKTIVSEKTFKKHMALHSDAKP  292 (372)
Q Consensus       232 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  292 (372)
                      -++++|.|+.|++.|. .+.|..|++. .++++|.|+ .|++.|...+.|..|+++|...++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3567788888888888 8888888887 788888888 888888888888888888766554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=71.53  Aligned_cols=44  Identities=14%  Similarity=0.165  Sum_probs=36.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55667778888888888888888888888888888888888876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.8e-11  Score=72.49  Aligned_cols=44  Identities=18%  Similarity=0.290  Sum_probs=34.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55666777778888888888888888888888888888888776

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.3e-11  Score=71.94  Aligned_cols=45  Identities=18%  Similarity=0.330  Sum_probs=36.7

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356677778888888888888888888888888888888888876

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=71.57  Aligned_cols=44  Identities=32%  Similarity=0.509  Sum_probs=30.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCS-SCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55666777777777777777777777777777766666 666653

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.4e-11  Score=71.85  Aligned_cols=45  Identities=18%  Similarity=0.283  Sum_probs=37.3

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677778888888888888888888888888888888888876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.10  E-value=2.2e-11  Score=72.08  Aligned_cols=44  Identities=20%  Similarity=0.252  Sum_probs=32.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777766

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.7e-11  Score=71.66  Aligned_cols=44  Identities=16%  Similarity=0.281  Sum_probs=37.0

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667778888888888888888888888888888888888877

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.10  E-value=2.3e-11  Score=71.95  Aligned_cols=44  Identities=23%  Similarity=0.255  Sum_probs=36.8

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=71.58  Aligned_cols=44  Identities=16%  Similarity=0.245  Sum_probs=35.3

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45666777788888888888888888888888888888888776

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.2e-11  Score=72.06  Aligned_cols=44  Identities=14%  Similarity=0.088  Sum_probs=36.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=5.4e-11  Score=72.99  Aligned_cols=46  Identities=15%  Similarity=0.421  Sum_probs=38.6

Q ss_pred             hhccCcccccccccccCChHHHHHHHh-hhcCCCCcccCcccccccc
Q psy16828        259 VHLAQRFECKLCHKTIVSEKTFKKHMA-LHSDAKPFVCNICGKDFKL  304 (372)
Q Consensus       259 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  304 (372)
                      +.++++|.|++|++.|.....|..|++ +|.+++||.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            456678888888888888888888886 8888889999999988875

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.3e-11  Score=71.95  Aligned_cols=44  Identities=16%  Similarity=0.095  Sum_probs=34.8

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666777778888888888888888888888888888888776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.8e-11  Score=72.47  Aligned_cols=44  Identities=16%  Similarity=0.280  Sum_probs=34.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55666777778888888888888888888888888888888776

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.7e-11  Score=71.68  Aligned_cols=44  Identities=16%  Similarity=0.223  Sum_probs=36.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.7e-11  Score=71.68  Aligned_cols=44  Identities=18%  Similarity=0.235  Sum_probs=35.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=72.52  Aligned_cols=44  Identities=18%  Similarity=0.240  Sum_probs=33.7

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666677777777777777778888888888888888888776

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.08  E-value=4.1e-11  Score=69.29  Aligned_cols=42  Identities=29%  Similarity=0.393  Sum_probs=28.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESG-PSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCS-CCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCC-CCCC
Confidence            34566667777777777777777777777777666665 6653

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.9e-11  Score=70.97  Aligned_cols=44  Identities=14%  Similarity=0.147  Sum_probs=36.0

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.9e-11  Score=70.97  Aligned_cols=44  Identities=20%  Similarity=0.217  Sum_probs=35.8

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45667777888888888888888888888888888888888876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=71.15  Aligned_cols=44  Identities=16%  Similarity=0.243  Sum_probs=35.8

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777888888888888888888888888888888888764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.4e-11  Score=70.70  Aligned_cols=43  Identities=30%  Similarity=0.466  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSC-CCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            56667777777777777777777777777777777766 77653

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.9e-11  Score=68.61  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=26.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.++++ |.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG-PSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS-CCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            34556666666666666666666666666666666655 655

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.06  E-value=5.5e-11  Score=70.27  Aligned_cols=44  Identities=16%  Similarity=0.240  Sum_probs=35.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44566777788888888888888888888888888888888876

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.9e-11  Score=70.16  Aligned_cols=43  Identities=28%  Similarity=0.396  Sum_probs=30.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSC-CCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCC-CCCCC
Confidence            55667777777777777777777777777777776666 66653

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.4e-11  Score=70.31  Aligned_cols=43  Identities=26%  Similarity=0.417  Sum_probs=30.8

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCC-CSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            55667777777777777777777777777777777666 76653

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.7e-11  Score=70.56  Aligned_cols=44  Identities=14%  Similarity=0.095  Sum_probs=34.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44566677778888888888888888888888888888888776

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.05  E-value=5.5e-11  Score=70.26  Aligned_cols=43  Identities=30%  Similarity=0.507  Sum_probs=30.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCS-SSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            56667777777777777777777777777777777666 76653

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-11  Score=70.30  Aligned_cols=42  Identities=31%  Similarity=0.505  Sum_probs=28.6

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCC-CCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            55666667777777777777777777777776666666 6665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.6e-11  Score=69.66  Aligned_cols=42  Identities=33%  Similarity=0.556  Sum_probs=30.8

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      ++|++++||.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP-SGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC-CSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            456777777777777777777777777777777766 777765

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.4e-11  Score=70.00  Aligned_cols=43  Identities=28%  Similarity=0.439  Sum_probs=32.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCC-SSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            56677777777777777777777777777777777776 77764

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.6e-11  Score=70.31  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=36.3

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHh-hhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMA-LHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|++ +|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5566777788888888888888888888888 8888888888876

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.2e-11  Score=70.03  Aligned_cols=43  Identities=26%  Similarity=0.504  Sum_probs=30.9

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|.+|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERP-SGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCS-CTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCC-CCCCC
Confidence            45667777777777777777777777777777777666 77653

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.1e-11  Score=70.09  Aligned_cols=43  Identities=28%  Similarity=0.534  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSC-SCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCC-CCCCC
Confidence            55667777777777777777777777777777777666 76653

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.1e-11  Score=69.80  Aligned_cols=42  Identities=31%  Similarity=0.532  Sum_probs=29.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC-SCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            55666677777777777777777777777777766666 6665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.8e-11  Score=69.89  Aligned_cols=42  Identities=29%  Similarity=0.428  Sum_probs=29.6

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCC-SSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCC-CCCC
Confidence            55667777777777777777777777777777776666 6665

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.5e-11  Score=69.96  Aligned_cols=43  Identities=28%  Similarity=0.481  Sum_probs=30.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCC-CCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            55667777777777777777777777777777776666 66653

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.2e-10  Score=68.43  Aligned_cols=42  Identities=29%  Similarity=0.449  Sum_probs=27.4

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCH  328 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~  328 (372)
                      .|++++||.|..|++.|...+.|..|+++|+++++ |.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG-KSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCC-CCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCC-CCCcCCC
Confidence            45666666666666666666666666666666665 6666664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.9e-11  Score=69.86  Aligned_cols=42  Identities=31%  Similarity=0.498  Sum_probs=29.5

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|+++++|.|..|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCC-CSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            55666777777777777777777777777777776666 6665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.7e-11  Score=69.90  Aligned_cols=42  Identities=26%  Similarity=0.539  Sum_probs=29.4

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      ++|++++||.|..|++.|...+.|..|+++|.++++ |.|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC-CSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            456677777777777777777777777777776666 666665

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.7e-11  Score=69.91  Aligned_cols=42  Identities=33%  Similarity=0.516  Sum_probs=29.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCC-SSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            55666777777777777777777777777777766666 6665

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.7e-11  Score=69.63  Aligned_cols=42  Identities=31%  Similarity=0.359  Sum_probs=29.8

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS-CSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            55667777777777777777777777777777776666 6665

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.1e-11  Score=69.53  Aligned_cols=43  Identities=26%  Similarity=0.444  Sum_probs=29.8

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC-CCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            55666777777777777777777777777777766666 66653

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.2e-11  Score=69.53  Aligned_cols=42  Identities=24%  Similarity=0.434  Sum_probs=29.8

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|+++++|.|..|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCC-CSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCC-CCCC
Confidence            55667777777777777777777777777777776666 6665

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9e-11  Score=69.34  Aligned_cols=43  Identities=28%  Similarity=0.389  Sum_probs=30.1

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC-CSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            55667777777777777777777777777777776666 66653

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.6e-11  Score=70.25  Aligned_cols=42  Identities=33%  Similarity=0.563  Sum_probs=30.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCS-SSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            56667777777777777777777777777777777666 7665

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.1e-11  Score=69.53  Aligned_cols=44  Identities=20%  Similarity=0.304  Sum_probs=35.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777888888888888888888888888888888888764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8e-11  Score=69.59  Aligned_cols=42  Identities=33%  Similarity=0.499  Sum_probs=29.6

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSS-SCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            55667777777777777777777777777777776666 6665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.8e-11  Score=69.39  Aligned_cols=42  Identities=36%  Similarity=0.572  Sum_probs=28.9

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p-~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCS-SCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCC-cCCC
Confidence            55666677777777777777777777777777666666 6665

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.4e-11  Score=69.27  Aligned_cols=42  Identities=29%  Similarity=0.488  Sum_probs=28.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC-SSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            55666667777777777777777777777777666666 6665

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.4e-11  Score=68.99  Aligned_cols=42  Identities=24%  Similarity=0.344  Sum_probs=29.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG-PSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS-CCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            55667777777777777777777777777777766665 6663

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.9e-11  Score=69.37  Aligned_cols=42  Identities=31%  Similarity=0.500  Sum_probs=29.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCS-SCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            55667777777777777777777777777777776666 6665

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=7.5e-11  Score=68.95  Aligned_cols=42  Identities=26%  Similarity=0.464  Sum_probs=29.5

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG-PSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCS-SCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCC-CCCC
Confidence            55667777777777777777777777777777776666 6663

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2e-10  Score=68.47  Aligned_cols=41  Identities=29%  Similarity=0.566  Sum_probs=23.7

Q ss_pred             hcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCC
Q psy16828        287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCH  328 (372)
Q Consensus       287 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~  328 (372)
                      |.++++|.|.+|++.|...+.|..|+++|+++++ |.|++|+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPSS   47 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCC-CCSCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCC-ccCCCCC
Confidence            3455556666666666666666666655555555 5555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.01  E-value=2.2e-11  Score=77.07  Aligned_cols=50  Identities=18%  Similarity=0.365  Sum_probs=31.4

Q ss_pred             HHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCC
Q psy16828        281 KKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTD  334 (372)
Q Consensus       281 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~  334 (372)
                      ..|+++|++++||.|+.|++.|...+.|.   ++|.++++ |.|+.|++.|...
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~-~~C~~C~k~f~~~   52 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGT-FRCTFCHTEVEED   52 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTE-EBCSSSCCBCEEC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCC-EECCCCCCccccC
Confidence            34566677777777777777776666654   55555555 6666666666443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=68.28  Aligned_cols=42  Identities=31%  Similarity=0.438  Sum_probs=28.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC-SCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC-CCCC
Confidence            55666667777777777777777777777776666665 6653

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=68.30  Aligned_cols=41  Identities=39%  Similarity=0.637  Sum_probs=27.1

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS-SCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC-CCC
Confidence            55566666666666666666666666666666666665 655

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.6e-11  Score=69.66  Aligned_cols=42  Identities=29%  Similarity=0.457  Sum_probs=28.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|.+|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB-TTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC-CCCC
Confidence            55666666667777777777666677777666666665 6664

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1e-10  Score=69.13  Aligned_cols=42  Identities=31%  Similarity=0.490  Sum_probs=30.5

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcC-CCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR-IRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~~C~  325 (372)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.+ +++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS-GPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTT-SSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            55667777777777777777777777777777776 666 7665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.00  E-value=1.6e-11  Score=77.72  Aligned_cols=54  Identities=13%  Similarity=0.306  Sum_probs=40.7

Q ss_pred             HhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHH
Q psy16828        253 NEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVN  309 (372)
Q Consensus       253 ~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  309 (372)
                      ..|++.|.++++|.|++|++.|...+.|.   ++|++++||.|+.|++.|...+.+.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            34566677777788888888887777775   7788888888888888887766544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=1.9e-10  Score=68.62  Aligned_cols=42  Identities=19%  Similarity=0.392  Sum_probs=35.6

Q ss_pred             hhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccc
Q psy16828        259 VHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGK  300 (372)
Q Consensus       259 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  300 (372)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            345678888888888888889999999999899999998875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.99  E-value=5.6e-11  Score=72.92  Aligned_cols=49  Identities=16%  Similarity=0.246  Sum_probs=29.1

Q ss_pred             cccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        272 KTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       272 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      +.|.....|..|+++|++++||.|..|++.|...+.|..|+++|+++++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            3445555555566666666666666666666666666666666655554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.99  E-value=1.5e-10  Score=66.87  Aligned_cols=42  Identities=14%  Similarity=0.214  Sum_probs=34.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            445667778888888888888888888888888888888884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.3e-10  Score=67.84  Aligned_cols=42  Identities=19%  Similarity=0.283  Sum_probs=28.1

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG-PSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC-TTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCC
Confidence            55666666777777777777777777777766666665 6653

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=68.74  Aligned_cols=42  Identities=31%  Similarity=0.507  Sum_probs=31.6

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|.+++||.|..|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC-CCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            56677777777777777777777777777777777776 7765

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.1e-10  Score=67.39  Aligned_cols=41  Identities=29%  Similarity=0.559  Sum_probs=26.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            44556666666666666666666666666666666655 554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.5e-10  Score=68.37  Aligned_cols=42  Identities=24%  Similarity=0.475  Sum_probs=29.5

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|.+|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC-CCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            45566777777777777777777777777777776666 6665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=2.6e-10  Score=66.93  Aligned_cols=42  Identities=12%  Similarity=0.216  Sum_probs=34.0

Q ss_pred             hhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCccc
Q psy16828        258 QVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICG  299 (372)
Q Consensus       258 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  299 (372)
                      .|.++++|.|++|++.|...+.|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            355677888888888888888888888888888888888885

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=66.51  Aligned_cols=42  Identities=12%  Similarity=0.243  Sum_probs=34.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445677788888888888888888889998888888888874

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=68.59  Aligned_cols=42  Identities=29%  Similarity=0.524  Sum_probs=29.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCC-CCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            55667777777777777777777777777777776666 6665

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1e-10  Score=67.56  Aligned_cols=41  Identities=24%  Similarity=0.420  Sum_probs=28.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            45566677777777777777777777777777766666 655

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.5e-11  Score=67.72  Aligned_cols=41  Identities=32%  Similarity=0.556  Sum_probs=25.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.++++ |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            44556666666666666666666666666666665555 544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.98  E-value=1.5e-10  Score=66.86  Aligned_cols=41  Identities=22%  Similarity=0.507  Sum_probs=27.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|+.|++.|.+.+.|..|+++|.++++ |.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            44566666677777777777777777777766666665 655

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=67.96  Aligned_cols=44  Identities=16%  Similarity=0.298  Sum_probs=36.8

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            35667778888888889999999999999999999999998863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.98  E-value=1.4e-10  Score=68.46  Aligned_cols=43  Identities=21%  Similarity=0.300  Sum_probs=34.7

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566777788888888888888888888888888888888863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=68.01  Aligned_cols=43  Identities=16%  Similarity=0.304  Sum_probs=35.0

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5566777788888888888888888888888888888888863

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.1e-10  Score=67.75  Aligned_cols=43  Identities=16%  Similarity=0.309  Sum_probs=35.1

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566777788888888888888888888888888888888863

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=68.67  Aligned_cols=42  Identities=29%  Similarity=0.533  Sum_probs=32.0

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      |+++|++++||.|.+|++.|...+.|..|+++|.++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP-SGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC-SSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            56677777778888888888777788888777777776 7765

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=67.57  Aligned_cols=43  Identities=16%  Similarity=0.237  Sum_probs=35.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566777888888888888888888888888888888888863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=67.80  Aligned_cols=43  Identities=16%  Similarity=0.299  Sum_probs=35.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566777888888888888888888888888888888888863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=67.88  Aligned_cols=43  Identities=16%  Similarity=0.314  Sum_probs=35.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5566777888888888888888888888888888888888863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=67.98  Aligned_cols=44  Identities=20%  Similarity=0.350  Sum_probs=35.2

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35566777788888888888888888888888888888888863

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.9e-10  Score=67.89  Aligned_cols=43  Identities=19%  Similarity=0.224  Sum_probs=34.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5566777788888888888888888888888888888888863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=67.52  Aligned_cols=43  Identities=19%  Similarity=0.327  Sum_probs=36.0

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3566777788888888888888888888898888888888886

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=67.69  Aligned_cols=43  Identities=21%  Similarity=0.317  Sum_probs=35.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567777888888888888888888888888888888888863

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=67.97  Aligned_cols=43  Identities=21%  Similarity=0.277  Sum_probs=34.6

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566777788888888888888888888888888888888863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2e-10  Score=67.78  Aligned_cols=43  Identities=16%  Similarity=0.322  Sum_probs=35.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5667777888888888888888888888888888888888863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=67.66  Aligned_cols=44  Identities=16%  Similarity=0.293  Sum_probs=36.0

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35667777888888888888888888888888888888888863

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.95  E-value=4.8e-10  Score=73.38  Aligned_cols=57  Identities=18%  Similarity=0.411  Sum_probs=50.1

Q ss_pred             ccCCCCccccc--ccccccccchHHhHHhhhhccCcccccc--cccccCChHHHHHHHhhh
Q psy16828        231 HENHKPYECYI--CNKILVSRGRLNEHLNQVHLAQRFECKL--CHKTIVSEKTFKKHMALH  287 (372)
Q Consensus       231 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  287 (372)
                      ....++|.|..  |++.|.....|..|++.|.++++|.|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            55678899988  9999999999999999999999999965  999999999999998775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.9e-10  Score=67.92  Aligned_cols=43  Identities=21%  Similarity=0.286  Sum_probs=35.0

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566777788888888888888888888888888888888863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=67.34  Aligned_cols=43  Identities=21%  Similarity=0.347  Sum_probs=35.0

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            5566777788888888888888888888888888888888863

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.6e-10  Score=66.55  Aligned_cols=41  Identities=17%  Similarity=0.162  Sum_probs=26.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|..|++.|...+.|..|+++|.++++ |.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG-PSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC-CCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC-CCC
Confidence            44556666666666666666666666666666666665 655

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2e-10  Score=67.83  Aligned_cols=43  Identities=16%  Similarity=0.356  Sum_probs=34.1

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5566777778888888888888888888888888888888863

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=67.46  Aligned_cols=42  Identities=19%  Similarity=0.381  Sum_probs=34.3

Q ss_pred             hhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        257 NQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       257 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      +.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            456677788888888888888888888888888888888876

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.2e-10  Score=67.63  Aligned_cols=43  Identities=16%  Similarity=0.294  Sum_probs=35.2

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566777888888888888888888888888888888888863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.2e-10  Score=66.91  Aligned_cols=43  Identities=21%  Similarity=0.322  Sum_probs=34.6

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566777788888888888888888888888888888888863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=66.94  Aligned_cols=42  Identities=17%  Similarity=0.283  Sum_probs=32.4

Q ss_pred             hhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        257 NQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       257 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      +.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345667777888888888888888888888888888888776

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=66.86  Aligned_cols=42  Identities=19%  Similarity=0.318  Sum_probs=35.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677788888888888888888888888888888888886

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=66.96  Aligned_cols=43  Identities=16%  Similarity=0.311  Sum_probs=35.3

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            4566777888888888888888888888888888888888863

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.6e-10  Score=66.61  Aligned_cols=42  Identities=14%  Similarity=0.237  Sum_probs=34.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            566677778888888888888888888888888888888874

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.7e-10  Score=66.53  Aligned_cols=42  Identities=14%  Similarity=0.150  Sum_probs=34.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            556677788888888888888888888888888888888874

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.3e-10  Score=67.55  Aligned_cols=42  Identities=14%  Similarity=0.290  Sum_probs=34.2

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677778888888888888888888888888888888886

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.3e-10  Score=66.10  Aligned_cols=41  Identities=34%  Similarity=0.527  Sum_probs=28.7

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|.+|++.|...+.|..|+++|.++++ |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG-PSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC-CCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC-CCC
Confidence            55667777777777777777777777777777776666 554

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.93  E-value=3e-10  Score=69.57  Aligned_cols=51  Identities=22%  Similarity=0.311  Sum_probs=42.9

Q ss_pred             ccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcc
Q psy16828        244 KILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFV  294 (372)
Q Consensus       244 ~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  294 (372)
                      +.|.....|..|++.|.++++|.|++|++.|...+.|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            567777788888888888888888888888989999999998898888763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.4e-11  Score=79.22  Aligned_cols=63  Identities=19%  Similarity=0.267  Sum_probs=29.3

Q ss_pred             HHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcC
Q psy16828        252 LNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       252 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      |..|+..+.+.+++.|+.|++.| ....|..|+ .|.+++||.|+.|++.|. ...|..|++++.+
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             HHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            33444444444444555554444 244444444 444444444544444443 3444444444443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.7e-10  Score=67.24  Aligned_cols=43  Identities=12%  Similarity=0.174  Sum_probs=34.6

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3566677778888888888888888888888888888888875

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.6e-10  Score=67.50  Aligned_cols=41  Identities=29%  Similarity=0.489  Sum_probs=27.2

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++ |.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG-PSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC-CSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC-CCC
Confidence            45566666666666666666666666666666666665 655

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.7e-10  Score=66.51  Aligned_cols=42  Identities=12%  Similarity=0.201  Sum_probs=33.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            556677777888888888888888888888888888888874

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.1e-10  Score=66.24  Aligned_cols=42  Identities=17%  Similarity=0.190  Sum_probs=34.2

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566677778888888888888888888888888888888874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=3.4e-10  Score=66.06  Aligned_cols=43  Identities=21%  Similarity=0.327  Sum_probs=35.9

Q ss_pred             hHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        254 EHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       254 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3566777788888888888888888899998889888888884

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.5e-10  Score=65.92  Aligned_cols=41  Identities=15%  Similarity=0.335  Sum_probs=33.6

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCccc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC  295 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  295 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55667777888888888888888888888888888888877

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.91  E-value=8.9e-10  Score=63.85  Aligned_cols=39  Identities=18%  Similarity=0.200  Sum_probs=25.0

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      .|++++||.|..|++.|...+.|..|+++|+++++ |.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKS-GPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC-SSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCC-ccCC
Confidence            45566666666666666666666666666666665 6654

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4e-10  Score=65.00  Aligned_cols=41  Identities=17%  Similarity=0.391  Sum_probs=34.7

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCccc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC  295 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  295 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45667778888888888889899999999999998888887

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=7.5e-10  Score=65.26  Aligned_cols=40  Identities=25%  Similarity=0.289  Sum_probs=28.1

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      ++|++++||.|.+|++.|...+.|..|+++|.++++ |.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCC-SSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCC-CCCC
Confidence            456677777777777777777777777777776666 6665

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.9e-10  Score=67.05  Aligned_cols=42  Identities=21%  Similarity=0.261  Sum_probs=32.8

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            556667777788888888888888888888888888888875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.1e-10  Score=66.08  Aligned_cols=40  Identities=33%  Similarity=0.526  Sum_probs=28.4

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECD  325 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  325 (372)
                      ++|++++||.|.+|++.|...+.|..|+++|.++++ |.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCC-CCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCC-CCCC
Confidence            456677777777777777777777777777776666 6665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.9e-10  Score=66.80  Aligned_cols=43  Identities=26%  Similarity=0.440  Sum_probs=29.0

Q ss_pred             HhhhcCCCCcccC--cccccccchhhHHHHHhhhcCCCCCccCCCC
Q psy16828        284 MALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIRPTFECDVC  327 (372)
Q Consensus       284 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C  327 (372)
                      .++|++++||.|.  .|++.|...+.|..|+++|.++++ |+|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS-CSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            3456667777776  677777777777777777666666 666655

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.9e-10  Score=66.53  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=34.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677788888888888888888888888888888888886

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.89  E-value=5.2e-10  Score=64.51  Aligned_cols=41  Identities=15%  Similarity=0.199  Sum_probs=33.3

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCccc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC  295 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  295 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            44566777888888888888888888888888888888877

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.8e-10  Score=65.12  Aligned_cols=41  Identities=15%  Similarity=0.361  Sum_probs=33.5

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCccc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC  295 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  295 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45567777888888888888888888888888888888876

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=4.3e-10  Score=66.33  Aligned_cols=43  Identities=21%  Similarity=0.307  Sum_probs=33.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcC-CCCcccCc
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSD-AKPFVCNI  297 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  297 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666777788888888888888888888888888 88888863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.6e-10  Score=65.51  Aligned_cols=42  Identities=21%  Similarity=0.393  Sum_probs=34.4

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445667778888888888888888888888888888888885

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=8.4e-10  Score=64.34  Aligned_cols=42  Identities=19%  Similarity=0.208  Sum_probs=34.1

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            445667778888888888888888888888888888888874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.2e-09  Score=62.63  Aligned_cols=38  Identities=34%  Similarity=0.531  Sum_probs=25.1

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFEC  324 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  324 (372)
                      +|++++||.|+.|++.|...+.|..|+++|+++++ |.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            45666666676677777666666666666666665 554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=3.5e-10  Score=66.71  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=30.9

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666677777777777777777777777777777777775

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=4.2e-10  Score=76.31  Aligned_cols=59  Identities=8%  Similarity=0.069  Sum_probs=47.0

Q ss_pred             HhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCccccccccccCC
Q psy16828        284 MALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVE  346 (372)
Q Consensus       284 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~~h~~~  346 (372)
                      .++|++++||.|+.|++.|...+.|..|+++|.++++ |+|..|.   ....|..|++.|.|.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~~~---~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ-KRAKRQE---RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH-HHCCCCS---CCCCCCCCCCCCCCS
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC-cccchhh---hHHHHHhhhcccccc
Confidence            4568888889999999999989999999988888887 8887653   344777888888873

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3.5e-10  Score=65.99  Aligned_cols=42  Identities=12%  Similarity=0.227  Sum_probs=31.1

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666677777777777777777777777777777777763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.5e-10  Score=76.05  Aligned_cols=66  Identities=17%  Similarity=0.137  Sum_probs=50.4

Q ss_pred             HHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCccccccccccCCC
Q psy16828        279 TFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEK  347 (372)
Q Consensus       279 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~~h~~~~  347 (372)
                      .|..|+++|.+++|+.|..|++.| ..+.|..|+ .+.+.++ |.|+.|++.|....|..|++++.+++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~-~~C~~C~~~~~~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGART-ELCGNCGRNVLVKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCE-EECSSSCCEEETTGGGTHHHHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCc-eEcccCCCcCcHHHHHHHHHHccCCc
Confidence            455677777788888888888888 478888887 7777777 88888888777777778887777654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1e-09  Score=63.96  Aligned_cols=42  Identities=14%  Similarity=0.192  Sum_probs=34.1

Q ss_pred             HHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        255 HLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       255 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            556677778888888888888888888888888888888763

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.84  E-value=2.1e-09  Score=62.27  Aligned_cols=40  Identities=18%  Similarity=0.179  Sum_probs=32.8

Q ss_pred             hhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCc
Q psy16828        258 QVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNI  297 (372)
Q Consensus       258 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  297 (372)
                      .|.++++|.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4566778888888888888888888888888888888863

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.82  E-value=2.7e-09  Score=59.51  Aligned_cols=35  Identities=20%  Similarity=0.284  Sum_probs=32.7

Q ss_pred             cccccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        338 KHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       338 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      .|++.|++++||.|+.|++.|.....|..|+++|+
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            37889999999999999999999999999999985

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.4e-09  Score=64.74  Aligned_cols=42  Identities=19%  Similarity=0.226  Sum_probs=34.6

Q ss_pred             hhhhccCccccc--ccccccCChHHHHHHHhhhcCCCCcccCcc
Q psy16828        257 NQVHLAQRFECK--LCHKTIVSEKTFKKHMALHSDAKPFVCNIC  298 (372)
Q Consensus       257 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  298 (372)
                      +.|.++++|.|.  .|++.|.....|..|+++|++++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456677788887  788888888888888888888888888876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3.3e-09  Score=62.40  Aligned_cols=40  Identities=23%  Similarity=0.380  Sum_probs=32.6

Q ss_pred             hhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        257 NQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       257 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      +.|.++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3556777888888888888888888888888888888885

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3e-09  Score=60.81  Aligned_cols=38  Identities=18%  Similarity=0.377  Sum_probs=31.9

Q ss_pred             hhhccCcccccccccccCChHHHHHHHhhhcCCCCccc
Q psy16828        258 QVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC  295 (372)
Q Consensus       258 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  295 (372)
                      .|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45677788888888888888888888888888888887

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=63.03  Aligned_cols=40  Identities=20%  Similarity=0.352  Sum_probs=31.9

Q ss_pred             hhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        257 NQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       257 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      ..|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3456677888888888888888888888888888888885

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.70  E-value=5.9e-09  Score=58.03  Aligned_cols=35  Identities=26%  Similarity=0.460  Sum_probs=28.3

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      |+++|++++||.|+.|++.|...+.|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            56778888888888888888888888888887765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=8.1e-09  Score=57.46  Aligned_cols=36  Identities=19%  Similarity=0.467  Sum_probs=27.8

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      ++|++++||.|..|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            457778888888888888888888888888777653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.65  E-value=1.6e-08  Score=56.99  Aligned_cols=33  Identities=24%  Similarity=0.577  Sum_probs=20.1

Q ss_pred             cCCCCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        288 SDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       288 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      ++++||.|..|++.|...+.|..|+++|.++++
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            455566666666666666666666666665554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.7e-08  Score=56.02  Aligned_cols=31  Identities=16%  Similarity=0.243  Sum_probs=28.5

Q ss_pred             cccCCCceeCcc--cCCcccChhhHHHHHhhcC
Q psy16828        342 VHDVEKSHLCFV--CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  372 (372)
                      .++|++||.|+.  |+++|..+..|..|+++|+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            467899999986  9999999999999999986

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.7e-08  Score=56.15  Aligned_cols=33  Identities=21%  Similarity=0.265  Sum_probs=30.3

Q ss_pred             cccccCCCceeCcccCCcccChhhHHHH-HhhcC
Q psy16828        340 MLVHDVEKSHLCFVCGAGFVNDAGLKVH-MRKHQ  372 (372)
Q Consensus       340 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~  372 (372)
                      ++.|++++||.|..|++.|.....|..| +++|+
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            4678999999999999999999999999 88885

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.4e-08  Score=56.50  Aligned_cols=33  Identities=24%  Similarity=0.389  Sum_probs=30.1

Q ss_pred             cccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        340 MLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       340 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ++.|++++||.|..|++.|.....|..|+++|+
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            357899999999999999999999999999885

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.62  E-value=2e-08  Score=54.97  Aligned_cols=33  Identities=24%  Similarity=0.447  Sum_probs=24.9

Q ss_pred             hcCCCCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       287 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      |++++||.|..|++.|.+.+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            567777778888888877777888877777654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.61  E-value=2.5e-08  Score=54.57  Aligned_cols=33  Identities=36%  Similarity=0.656  Sum_probs=25.2

Q ss_pred             hcCCCCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       287 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      |++++||.|..|++.|...+.|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            567777888888888888888888877777654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.56  E-value=3.8e-08  Score=55.40  Aligned_cols=36  Identities=17%  Similarity=0.476  Sum_probs=29.7

Q ss_pred             hccCcccccccccccCChHHHHHHHhhhcCCCCccc
Q psy16828        260 HLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVC  295 (372)
Q Consensus       260 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  295 (372)
                      .++++|.|.+|++.|...+.|..|+++|++++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            456788888888888888888888888888888865

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.56  E-value=4.4e-08  Score=53.58  Aligned_cols=31  Identities=19%  Similarity=0.458  Sum_probs=28.4

Q ss_pred             cccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +|++++||.|..|++.|.....|..|+++|+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            4788999999999999999999999999885

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=1e-09  Score=74.37  Aligned_cols=58  Identities=10%  Similarity=0.176  Sum_probs=43.8

Q ss_pred             hhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        257 NQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       257 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      ..|.++++|.|++|++.|...+.|..|+++|++++||.|..|.    ....|..|.+.|.+.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            3466777888888888888888888888888888888886654    455566777776653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.54  E-value=4.6e-08  Score=53.47  Aligned_cols=31  Identities=23%  Similarity=0.430  Sum_probs=28.2

Q ss_pred             cccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +|++++||.|..|++.|.....|..|+++|+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            3678999999999999999999999999885

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=6.2e-08  Score=60.31  Aligned_cols=35  Identities=17%  Similarity=0.396  Sum_probs=16.6

Q ss_pred             ccCcccccc--cccccCChHHHHHHH-hhhcCCCCccc
Q psy16828        261 LAQRFECKL--CHKTIVSEKTFKKHM-ALHSDAKPFVC  295 (372)
Q Consensus       261 ~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C  295 (372)
                      +++||+|.+  |+++|...++|..|+ ++|++++||.|
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            344444433  555555555555554 34555555444

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=5.2e-08  Score=54.01  Aligned_cols=32  Identities=25%  Similarity=0.452  Sum_probs=22.7

Q ss_pred             hcCCCCcccCc--ccccccchhhHHHHHhhhcCC
Q psy16828        287 HSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       287 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      +++++||.|+.  |++.|...+.|..|+++|++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45677777765  777777777777777777654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=5.7e-08  Score=53.51  Aligned_cols=32  Identities=22%  Similarity=0.269  Sum_probs=29.3

Q ss_pred             ccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +.|++++||.|..|++.|.....|..|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            46788999999999999999999999999985

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=6.9e-08  Score=53.17  Aligned_cols=32  Identities=25%  Similarity=0.424  Sum_probs=29.4

Q ss_pred             ccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +.|.+++||.|.+|++.|.....|..|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            46789999999999999999999999999885

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=4.6e-08  Score=54.29  Aligned_cols=32  Identities=19%  Similarity=0.387  Sum_probs=29.5

Q ss_pred             ccccCCCceeCcccCCcccCh-hhHHHHHhhcC
Q psy16828        341 LVHDVEKSHLCFVCGAGFVND-AGLKVHMRKHQ  372 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~  372 (372)
                      ++|.+++||.|+.|++.|... ..|..|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            578899999999999999999 99999999874

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=1.1e-07  Score=59.27  Aligned_cols=39  Identities=23%  Similarity=0.334  Sum_probs=34.0

Q ss_pred             hcCCCCcccCc--ccccccchhhHHHHH-hhhcCCCCCccCCC
Q psy16828        287 HSDAKPFVCNI--CGKDFKLKYYVNLHM-RTHTRIRPTFECDV  326 (372)
Q Consensus       287 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~C~~  326 (372)
                      .++++||+|..  |+++|...+.|..|+ ++|++++| |.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-ccccc
Confidence            57899999975  999999999999997 68999998 77764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=8.4e-08  Score=52.79  Aligned_cols=32  Identities=31%  Similarity=0.403  Sum_probs=29.3

Q ss_pred             ccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ..|.+++||.|..|++.|.....|..|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            35789999999999999999999999999885

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.48  E-value=1.1e-07  Score=51.19  Aligned_cols=30  Identities=27%  Similarity=0.533  Sum_probs=14.9

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCCCc
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAKPF  293 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  293 (372)
                      ||.|++|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            344555555555555555555555554444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=4.4e-08  Score=54.36  Aligned_cols=33  Identities=18%  Similarity=0.360  Sum_probs=26.2

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHH-HhhhcC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLH-MRTHTR  317 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  317 (372)
                      ++|++++||.|..|++.|...+.|..| ++.|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            457788888888888888888888888 777765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.47  E-value=1.1e-07  Score=51.09  Aligned_cols=32  Identities=22%  Similarity=0.342  Sum_probs=28.4

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcCCCCCcc
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFE  323 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  323 (372)
                      +||.|+.|++.|...+.|..|+++|.++++ |.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE-ER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC-CC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC-CC
Confidence            579999999999999999999999998887 54

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=8.3e-08  Score=52.82  Aligned_cols=33  Identities=30%  Similarity=0.546  Sum_probs=25.4

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      .|.+++||.|..|++.|...+.|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            467777888888888888888888888777654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=8.2e-08  Score=52.84  Aligned_cols=33  Identities=27%  Similarity=0.428  Sum_probs=24.7

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      .|++++||.|..|++.|...+.|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            466777788888888888888888887777654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=7.9e-08  Score=53.30  Aligned_cols=34  Identities=18%  Similarity=0.340  Sum_probs=26.9

Q ss_pred             hhhcCCCCcccCcccccccch-hhHHHHHhhhcCC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLK-YYVNLHMRTHTRI  318 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  318 (372)
                      ++|++++||.|+.|++.|... +.|..|+++|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            357778888888888888887 8888888887764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.45  E-value=9.9e-08  Score=56.43  Aligned_cols=31  Identities=32%  Similarity=0.603  Sum_probs=27.6

Q ss_pred             cccCCCceeCcccCCcccChhhHHHHHh-hcC
Q psy16828        342 VHDVEKSHLCFVCGAGFVNDAGLKVHMR-KHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~  372 (372)
                      +|+|++||.|.+||+.|.....|..|++ +|+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            4789999999999999999999999999 874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.1e-07  Score=52.28  Aligned_cols=33  Identities=33%  Similarity=0.577  Sum_probs=25.0

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      +|.+++||.|..|++.|...+.|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            466777788888888888888888887777654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.42  E-value=1.4e-07  Score=48.05  Aligned_cols=27  Identities=26%  Similarity=0.476  Sum_probs=25.4

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ++||.|..||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999986

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.41  E-value=8.2e-08  Score=52.32  Aligned_cols=26  Identities=23%  Similarity=0.422  Sum_probs=20.0

Q ss_pred             hcCCCCcccCcccccccchhhHHHHH
Q psy16828        287 HSDAKPFVCNICGKDFKLKYYVNLHM  312 (372)
Q Consensus       287 h~~~~~~~C~~C~~~f~~~~~l~~H~  312 (372)
                      +.+++||.|+.|+++|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            35677888888888888888888876

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.7e-07  Score=51.55  Aligned_cols=31  Identities=35%  Similarity=0.590  Sum_probs=28.6

Q ss_pred             cccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      .|.++++|.|..|++.|.....|..|+++|+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            5788999999999999999999999999885

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.41  E-value=9.7e-08  Score=48.66  Aligned_cols=27  Identities=33%  Similarity=0.571  Sum_probs=25.3

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ++||.|+.||+.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999986

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=2.1e-07  Score=51.16  Aligned_cols=33  Identities=36%  Similarity=0.544  Sum_probs=24.3

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      .|.++++|.|..|++.|...+.|..|+++|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            356677777777777777777777777777654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.39  E-value=1.2e-07  Score=55.76  Aligned_cols=37  Identities=16%  Similarity=0.379  Sum_probs=32.5

Q ss_pred             cccccccccCCCceeCc--ccCCcccChhhHHHHHhhcC
Q psy16828        336 RTKHMLVHDVEKSHLCF--VCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       336 l~~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +..|...|++++||.|.  .||+.|.....|..|+++|+
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            44566779999999995  79999999999999999985

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2e-07  Score=51.27  Aligned_cols=31  Identities=26%  Similarity=0.392  Sum_probs=28.3

Q ss_pred             cccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      .|.+++||.|++|++.|.....|..|+++|+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            4678899999999999999999999999885

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=2.2e-07  Score=51.74  Aligned_cols=34  Identities=32%  Similarity=0.602  Sum_probs=22.4

Q ss_pred             hcCCCCcccC--cccccccchhhHHHHHhhhcCCCC
Q psy16828        287 HSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       287 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      |++++||.|.  .|++.|...+.|..|+++|.++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            3556667776  377777777777777766666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.5e-07  Score=50.84  Aligned_cols=33  Identities=39%  Similarity=0.635  Sum_probs=23.9

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      .|.+++||.|+.|++.|...+.|..|+++|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            356677777777777777777777777777654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.31  E-value=2.3e-07  Score=54.79  Aligned_cols=35  Identities=29%  Similarity=0.593  Sum_probs=25.7

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHh-hhcCCCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMR-THTRIRP  320 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  320 (372)
                      +|++++||.|.+|++.|...+.|..|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3677888888888888888888888888 7776554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.30  E-value=3.7e-07  Score=46.81  Aligned_cols=27  Identities=30%  Similarity=0.570  Sum_probs=25.2

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999999985

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=4.7e-07  Score=57.02  Aligned_cols=31  Identities=23%  Similarity=0.332  Sum_probs=23.8

Q ss_pred             cccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      .+.+++||.|..|++.|.....|..|+++|+
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            3566778888888888888888888888774

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.24  E-value=3.9e-07  Score=49.57  Aligned_cols=28  Identities=21%  Similarity=0.445  Sum_probs=25.1

Q ss_pred             ccCCCceeCcccCCcccChhhHHHHHhh
Q psy16828        343 HDVEKSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       343 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      +.||+||.|+.||++|...+.|+.|+..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py   30 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCe
Confidence            4689999999999999999999999853

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.23  E-value=6.3e-07  Score=49.83  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=27.1

Q ss_pred             hccCccccc--ccccccCChHHHHHHHhhhcCCCCc
Q psy16828        260 HLAQRFECK--LCHKTIVSEKTFKKHMALHSDAKPF  293 (372)
Q Consensus       260 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  293 (372)
                      .++++|.|.  .|++.|...+.|..|+++|++++||
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            456778888  4888888888888888888888776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.23  E-value=4.4e-07  Score=50.15  Aligned_cols=31  Identities=29%  Similarity=0.665  Sum_probs=27.9

Q ss_pred             cccCCCceeCcc--cCCcccChhhHHHHHhhcC
Q psy16828        342 VHDVEKSHLCFV--CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  372 (372)
                      .|++++||.|.+  ||+.|.....|..|+++|+
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            478899999985  9999999999999999884

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=1.4e-07  Score=55.45  Aligned_cols=37  Identities=30%  Similarity=0.497  Sum_probs=27.9

Q ss_pred             HHHhhhcCCCCcccC--cccccccchhhHHHHHhhhcCC
Q psy16828        282 KHMALHSDAKPFVCN--ICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       282 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      .|...|++++||.|.  .|++.|...+.|..|+++|.++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            344567788888884  6888888888888888887764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.22  E-value=6.7e-07  Score=49.41  Aligned_cols=32  Identities=31%  Similarity=0.564  Sum_probs=22.8

Q ss_pred             hcCCCCcccCc--ccccccchhhHHHHHhhhcCC
Q psy16828        287 HSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       287 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      |++++||.|.+  |++.|...+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677777764  777777777777777777654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.51  E-value=1.8e-07  Score=47.13  Aligned_cols=26  Identities=38%  Similarity=0.760  Sum_probs=23.6

Q ss_pred             CceeCcccCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +||.|+.||+.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57999999999999999999999885

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=1.7e-06  Score=54.38  Aligned_cols=40  Identities=20%  Similarity=0.323  Sum_probs=31.5

Q ss_pred             hcCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCC
Q psy16828        287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCH  328 (372)
Q Consensus       287 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~  328 (372)
                      +.+++||.|..|++.|...+.|..|+++|++..  ..+.++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~--~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS--LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS--CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc--ccccccc
Confidence            567888999999999999999999999988765  3444443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.18  E-value=9.8e-07  Score=45.54  Aligned_cols=27  Identities=30%  Similarity=0.508  Sum_probs=16.6

Q ss_pred             CcccCcccccccchhhHHHHHhhhcCC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      ||.|+.|++.|...+.|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566666666666666666666665543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=9.9e-07  Score=45.89  Aligned_cols=28  Identities=32%  Similarity=0.655  Sum_probs=17.3

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      +||.|..|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566666666666666666666665543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.16  E-value=1.3e-06  Score=45.06  Aligned_cols=26  Identities=35%  Similarity=0.786  Sum_probs=15.6

Q ss_pred             CcccCcccccccchhhHHHHHhhhcC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ||.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            45666666666666666666665554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.16  E-value=1.1e-06  Score=45.71  Aligned_cols=27  Identities=26%  Similarity=0.504  Sum_probs=25.1

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ++||.|..||+.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            478999999999999999999999885

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.16  E-value=1.3e-07  Score=50.50  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=11.3

Q ss_pred             CcccCcccccccchhhHHHHHhhhcCC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      ||.|..|++.|...+.|..|+++|.++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccC
Confidence            344444444444444444444444333

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.16  E-value=9.4e-07  Score=44.79  Aligned_cols=25  Identities=36%  Similarity=0.715  Sum_probs=17.4

Q ss_pred             CCcccCcccccccchhhHHHHHhhh
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            5667777777777777777776665

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.15  E-value=1.3e-06  Score=45.43  Aligned_cols=28  Identities=14%  Similarity=0.303  Sum_probs=17.9

Q ss_pred             CcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      ||.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5666666666666666666666666543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.15  E-value=7.5e-07  Score=45.19  Aligned_cols=25  Identities=28%  Similarity=0.603  Sum_probs=17.0

Q ss_pred             CCcccCcccccccchhhHHHHHhhh
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5666777777777777777776655

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.14  E-value=1.1e-06  Score=45.01  Aligned_cols=26  Identities=46%  Similarity=1.044  Sum_probs=16.9

Q ss_pred             CCcccCcccccccchhhHHHHHhhhc
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                      +||.|+.|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            46666666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.13  E-value=1.2e-07  Score=50.61  Aligned_cols=31  Identities=19%  Similarity=0.398  Sum_probs=24.9

Q ss_pred             CcccccccccccCChHHHHHHHhhhcCCCCc
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSDAKPF  293 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  293 (372)
                      +||.|++|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3678888888888888888888888888775

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.11  E-value=1.3e-06  Score=45.05  Aligned_cols=26  Identities=23%  Similarity=0.469  Sum_probs=24.1

Q ss_pred             CceeCcccCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +||.|+.||+.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            58999999999999999999999884

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=1.8e-06  Score=44.46  Aligned_cols=28  Identities=25%  Similarity=0.441  Sum_probs=18.5

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566777777777677777776666554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.09  E-value=1.6e-06  Score=44.64  Aligned_cols=26  Identities=35%  Similarity=0.763  Sum_probs=15.0

Q ss_pred             CcccCcccccccchhhHHHHHhhhcC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ||.|..|++.|...+.|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            45555555555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.09  E-value=1.9e-06  Score=43.52  Aligned_cols=25  Identities=32%  Similarity=0.612  Sum_probs=22.6

Q ss_pred             ceeCcccCCcccChhhHHHHHhhcC
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ||.|..||+.|.....|..|+++|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            5899999999999999999999985

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=2.8e-06  Score=44.94  Aligned_cols=28  Identities=25%  Similarity=0.559  Sum_probs=17.6

Q ss_pred             CCcccC--cccccccchhhHHHHHhhhcCC
Q psy16828        291 KPFVCN--ICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       291 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456666  5666666666666666666543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.06  E-value=2e-06  Score=43.44  Aligned_cols=25  Identities=28%  Similarity=0.680  Sum_probs=14.3

Q ss_pred             CcccCcccccccchhhHHHHHhhhc
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                      ||.|..|++.|.+.+.|..|+++|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            3556666666666666666655554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=2.7e-06  Score=45.06  Aligned_cols=27  Identities=30%  Similarity=0.557  Sum_probs=24.9

Q ss_pred             CCceeCc--ccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCF--VCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ++||.|.  .||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            4789999  89999999999999999985

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.06  E-value=2.5e-06  Score=44.76  Aligned_cols=26  Identities=46%  Similarity=0.866  Sum_probs=15.1

Q ss_pred             CcccC--cccccccchhhHHHHHhhhcC
Q psy16828        292 PFVCN--ICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       292 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ||.|+  .|++.|...+.|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            45555  566666666666666555554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=5.6e-07  Score=46.55  Aligned_cols=26  Identities=38%  Similarity=0.731  Sum_probs=15.4

Q ss_pred             CcccCcccccccchhhHHHHHhhhcC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ||.|..|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45566666666666666666655544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.05  E-value=3.6e-06  Score=43.28  Aligned_cols=28  Identities=21%  Similarity=0.710  Sum_probs=22.8

Q ss_pred             CcccccccccccCChHHHHHHHhhhcCC
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSDA  290 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  290 (372)
                      ++|.|++|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3678888888888888888888888765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=6.4e-07  Score=46.70  Aligned_cols=27  Identities=30%  Similarity=0.616  Sum_probs=24.1

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ++||.|..||+.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            478999999999999999999999874

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.2e-07  Score=46.49  Aligned_cols=27  Identities=37%  Similarity=0.682  Sum_probs=16.5

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      +||.|..|++.|...+.|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            456666666666666666666665554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=3.2e-06  Score=43.43  Aligned_cols=29  Identities=28%  Similarity=0.673  Sum_probs=23.1

Q ss_pred             CcccccccccccCChHHHHHHHhhhcCCC
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      ++|.|++|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            36788888888888888888888887653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.00  E-value=4.2e-06  Score=43.35  Aligned_cols=28  Identities=14%  Similarity=0.494  Sum_probs=21.9

Q ss_pred             cccccccccccCChHHHHHHHhhhcCCC
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      +|.|++|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5778888888888888888888877664

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.25  E-value=8.2e-07  Score=45.89  Aligned_cols=26  Identities=35%  Similarity=0.805  Sum_probs=23.1

Q ss_pred             CceeCcccCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +||.|..||+.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            47899999999999999999999874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=8.9e-07  Score=44.40  Aligned_cols=25  Identities=44%  Similarity=0.905  Sum_probs=16.4

Q ss_pred             CCcccCcccccccchhhHHHHHhhh
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      +||.|+.||+.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566666777766666666666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.96  E-value=6.2e-06  Score=43.19  Aligned_cols=29  Identities=24%  Similarity=0.591  Sum_probs=23.7

Q ss_pred             Cccccc--ccccccCChHHHHHHHhhhcCCC
Q psy16828        263 QRFECK--LCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       263 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            367887  88888888888888888888763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=3.8e-06  Score=43.58  Aligned_cols=26  Identities=19%  Similarity=0.637  Sum_probs=15.2

Q ss_pred             CcccCcccccccchhhHHHH-HhhhcC
Q psy16828        292 PFVCNICGKDFKLKYYVNLH-MRTHTR  317 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  317 (372)
                      ||.|..|++.|.+.+.|..| +++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            55666666666666666666 455544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.95  E-value=1.2e-05  Score=50.21  Aligned_cols=52  Identities=21%  Similarity=0.399  Sum_probs=42.9

Q ss_pred             ccccc--cccccCChHHHHHHH-hhhcCCC------CcccC--cccccccchhhHHHHHhhhc
Q psy16828        265 FECKL--CHKTIVSEKTFKKHM-ALHSDAK------PFVCN--ICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       265 ~~C~~--C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h~  316 (372)
                      +.|.+  |++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|+++.|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            45666  889999999999998 4787665      79997  79999999999999998754

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.93  E-value=4.4e-06  Score=42.86  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=19.6

Q ss_pred             cccccccccccCChHHHHHHHhhhcCC
Q psy16828        264 RFECKLCHKTIVSEKTFKKHMALHSDA  290 (372)
Q Consensus       264 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  290 (372)
                      +|.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            567777777777777777777777665

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.86  E-value=7.2e-06  Score=42.48  Aligned_cols=26  Identities=27%  Similarity=0.447  Sum_probs=23.1

Q ss_pred             CceeCcccCCcccChhhHHHH-HhhcC
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVH-MRKHQ  372 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H-~~~h~  372 (372)
                      +||.|..||+.|.....|..| +++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            479999999999999999999 67774

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.84  E-value=7.1e-06  Score=42.09  Aligned_cols=26  Identities=27%  Similarity=0.556  Sum_probs=24.2

Q ss_pred             CceeCc--ccCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCF--VCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~--~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +||.|.  .||+.|.....|..|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            479999  99999999999999999985

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.73  E-value=1.5e-05  Score=40.78  Aligned_cols=25  Identities=36%  Similarity=0.788  Sum_probs=15.5

Q ss_pred             CcccC--cccccccchhhHHHHHhhhc
Q psy16828        292 PFVCN--ICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       292 ~~~C~--~C~~~f~~~~~l~~H~~~h~  316 (372)
                      ||.|.  .|++.|...+.|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45666  66666666666666666554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.13  E-value=0.0012  Score=40.99  Aligned_cols=47  Identities=17%  Similarity=0.423  Sum_probs=24.3

Q ss_pred             CCccccCChhhHHHHHhhhcCCCc------eeecC--CCCCcccChHHHHHHHHH
Q psy16828        155 QCDYATKDKYNLGTHIKRRHTKEY------SVLCT--QCGFGCYTNRELEEHQIL  201 (372)
Q Consensus       155 ~C~~~~~~~~~l~~H~~~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~  201 (372)
                      .|++.|.+...|..|+...|.+..      +|.|.  .|++.+.....|..|++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            355566666666666544454332      44553  555555555555555443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.13  E-value=0.00013  Score=52.74  Aligned_cols=29  Identities=21%  Similarity=0.389  Sum_probs=25.3

Q ss_pred             ccccCCCceeCcccCCcccChhhHHHHHh
Q psy16828        341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMR  369 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  369 (372)
                      ....+.+.|.|.+|...|.....|..|..
T Consensus        86 ~~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           86 ISDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CSSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             cccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            34566788999999999999999999986

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.09  E-value=0.0013  Score=50.36  Aligned_cols=56  Identities=20%  Similarity=0.385  Sum_probs=29.2

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCccccccccccCCCc
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLVHDVEKS  348 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~~h~~~~~  348 (372)
                      ++..|+.|+..+ ....|..|+...-..+. ..|+.|+..+....|..|...+.|+.+
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~-~~C~~C~~~~~~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQ-VSCDNCAASMAFEDKEIHDQNCPLALE  164 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCE-EECTTTCCEEEGGGHHHHHTTCCC---
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCC-eECCCCCCccCHHHHHhHHHhCcChhh
Confidence            344555565555 45555556554444444 556666655555555555555555543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.97  E-value=0.00034  Score=53.73  Aligned_cols=146  Identities=12%  Similarity=0.218  Sum_probs=90.1

Q ss_pred             CcccCCCCccccCChhhHHHHHhhhcCCCceeecCCCCCcccChHHHHHHHHHhcCCCCcccccchhhhcChhhhHhhhh
Q psy16828        149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHER  228 (372)
Q Consensus       149 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  228 (372)
                      ..+.|++|...+.++                +.+ .|+-.|-..- +...+...    ...|+.|...+.....+..-..
T Consensus        17 ~~~~C~IC~~~~~~p----------------v~~-~CgH~fC~~C-i~~~~~~~----~~~CP~Cr~~~~~~~~~~~~~~   74 (170)
T 3hcs_A           17 SKYECPICLMALREA----------------VQT-PCGHRFCKAC-IIKSIRDA----GHKCPVDNEILLENQLFPDNFA   74 (170)
T ss_dssp             GGGBCTTTCSBCSSE----------------EEC-TTSCEEEHHH-HHHHHHHH----CSBCTTTCCBCCGGGCEECHHH
T ss_pred             CCCCCCCCChhhcCc----------------EEC-CCCCHHHHHH-HHHHHHhC----CCCCCCCccCcchhhhhhhHHH
Confidence            457899998877543                333 3666664332 22222221    1379999877654321111111


Q ss_pred             hhccCCCCcccc--cccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchh
Q psy16828        229 MKHENHKPYECY--ICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKY  306 (372)
Q Consensus       229 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  306 (372)
                      ..-.......|+  -|+..+. ...+..|+... .-.++.|+.|+..+ .+..|..|+...-..++..|+.|+..+ ...
T Consensus        75 ~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~  150 (170)
T 3hcs_A           75 KREILSLMVKCPNEGCLHKME-LRHLEDHQAHC-EFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-AFE  150 (170)
T ss_dssp             HHHHHTSEEECCSTTCCCEEE-GGGHHHHHTTC-TTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-EGG
T ss_pred             HHHHhhcccCCCCCCCCceec-HhHHHHHHhcC-CceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-CHH
Confidence            112234556674  4766553 56777887432 23567899999887 677889998877778888899999887 467


Q ss_pred             hHHHHHhhhcCCCC
Q psy16828        307 YVNLHMRTHTRIRP  320 (372)
Q Consensus       307 ~l~~H~~~h~~~~~  320 (372)
                      .|..|..++.+..+
T Consensus       151 ~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          151 DKEIHDQNCPLALE  164 (170)
T ss_dssp             GHHHHHTTCCC---
T ss_pred             HHHhHHHhCcChhh
Confidence            88999988888765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.81  E-value=0.00031  Score=49.55  Aligned_cols=33  Identities=24%  Similarity=0.417  Sum_probs=30.2

Q ss_pred             cccccccCCCceeCcccCCcccChhhHHHHHhh
Q psy16828        338 KHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       338 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      .....|+|+++|.|..|++.|.+...|..|+++
T Consensus        40 ~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           40 EFDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            466788999999999999999999999999985

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.76  E-value=0.0014  Score=47.23  Aligned_cols=77  Identities=14%  Similarity=0.282  Sum_probs=48.3

Q ss_pred             CCCcccccccccccccchHHhHHh--hhhcc-Cccccccc------ccccCChHHHHHHHhhhcCCCCcccCcccccccc
Q psy16828        234 HKPYECYICNKILVSRGRLNEHLN--QVHLA-QRFECKLC------HKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKL  304 (372)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~--~~~~~-~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  304 (372)
                      .+++.|.+|+..|.+.+.+..|..  .|... +.+.+...      +..+...    .+...+.+...|.|.+|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCC
Confidence            366889999999999999988884  33211 12222100      1111111    01123456677899999999999


Q ss_pred             hhhHHHHHhh
Q psy16828        305 KYYVNLHMRT  314 (372)
Q Consensus       305 ~~~l~~H~~~  314 (372)
                      ...|..|...
T Consensus       106 ~~~~~~H~~g  115 (127)
T 1zu1_A          106 PVVAESHYIG  115 (127)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHCC
Confidence            9999999743

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.30  E-value=0.00087  Score=47.31  Aligned_cols=32  Identities=16%  Similarity=0.209  Sum_probs=25.7

Q ss_pred             HhhhcCCCCcccCcccccccchhhHHHHHhhh
Q psy16828        284 MALHSDAKPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       284 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      ...|+|+++|.|..|++.|.+.+.|..|+++.
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            34577888888888888888888888887663

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.81  E-value=0.0087  Score=33.43  Aligned_cols=27  Identities=19%  Similarity=0.326  Sum_probs=20.7

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      .+|.|+.|+..|.....|+.|++..-+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            567888888888888888888775433

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.67  E-value=0.01  Score=33.13  Aligned_cols=32  Identities=19%  Similarity=0.269  Sum_probs=26.7

Q ss_pred             CCCCccccCcccccccchhHHhhhhhccCcCC
Q psy16828         17 SKYIKVECPVCGKVLSRKSKLVSHMRSFHTSV   48 (372)
Q Consensus        17 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   48 (372)
                      ....+|.|+-|+..|.....|+.||+-..++.
T Consensus         8 ~~~~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A            8 QDGGRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             CCSSCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             ccCCceeCCcccccccchHHHHhhhhhcCcch
Confidence            34478999999999999999999999655443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.51  E-value=0.007  Score=31.64  Aligned_cols=27  Identities=30%  Similarity=0.597  Sum_probs=25.1

Q ss_pred             ccccCcccccccchhHHhhhhhccCcC
Q psy16828         21 KVECPVCGKVLSRKSKLVSHMRSFHTS   47 (372)
Q Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~~H~~   47 (372)
                      .|.||+|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            599999999999999999999988875

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.33  E-value=0.041  Score=28.71  Aligned_cols=27  Identities=37%  Similarity=0.599  Sum_probs=23.7

Q ss_pred             CeecccccccccChhHHHHHHHhhccC
Q psy16828         82 PVECSYCGKVLSRKDKLTRHIAAVHSG  108 (372)
Q Consensus        82 ~~~C~~C~~~~~~~~~l~~H~~~~h~~  108 (372)
                      .|.|++|-+.+.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            489999999999999999999887765

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=93.91  E-value=0.045  Score=30.46  Aligned_cols=29  Identities=21%  Similarity=0.524  Sum_probs=15.7

Q ss_pred             ccCCCCCCcCCCCccccccccccCCCceeCcccCCc
Q psy16828        322 FECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAG  357 (372)
Q Consensus       322 ~~C~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~~  357 (372)
                      |+|.-|++.|+...|..-       ..-+|++||+.
T Consensus         4 Y~C~rCg~~fs~~el~~l-------P~IrCpyCGyr   32 (48)
T 4ayb_P            4 YRCGKCWKTFTDEQLKVL-------PGVRCPYCGYK   32 (48)
T ss_dssp             -CCCCTTTTCCCCCSCCC-------SSSCCTTTCCS
T ss_pred             EEeeccCCCccHHHHhhC-------CCcccCccCcE
Confidence            666667766666544321       22447777664

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=92.30  E-value=0.044  Score=35.24  Aligned_cols=46  Identities=17%  Similarity=0.377  Sum_probs=25.0

Q ss_pred             ccC-CCCCCcCCCCccccccccccCCCceeCcccCCcccChhhHHHHH
Q psy16828        322 FEC-DVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHM  368 (372)
Q Consensus       322 ~~C-~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  368 (372)
                      ..| ..|+..+....|..|....=..++-.|.+|+..+. ...|..|.
T Consensus        17 v~C~~~C~~~v~r~~l~~H~~~~C~~r~v~C~~C~~~~~-~~~l~~H~   63 (76)
T 2yuc_A           17 IPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFS-GEAYESHE   63 (76)
T ss_dssp             CBCTTCCSCBCCSSSSTTTTTTSCTTSCCCCSSSCCCCC-HHHHHHTT
T ss_pred             cCCCccccHHhhHhHHHhhCHhhCCCcceECCCCCCccC-HHHHHHHH
Confidence            556 35666666556666654333445555666666553 34455554

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.23  E-value=0.33  Score=25.39  Aligned_cols=25  Identities=16%  Similarity=0.175  Sum_probs=20.2

Q ss_pred             CCeecccccccccChhHHHHHHHhh
Q psy16828         81 APVECSYCGKVLSRKDKLTRHIAAV  105 (372)
Q Consensus        81 ~~~~C~~C~~~~~~~~~l~~H~~~~  105 (372)
                      ..+.|..|+..|.+...+..|..-.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             CcCeeccccceehhhHHHhhhheec
Confidence            5678999999999898888887543

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=90.99  E-value=0.49  Score=27.23  Aligned_cols=44  Identities=18%  Similarity=0.420  Sum_probs=25.2

Q ss_pred             ecccccccccCchhHHHHHHhhcccCCCCccccccccCcccCCCCcc-ccCChhhHHHHH
Q psy16828        112 PCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDY-ATKDKYNLGTHI  170 (372)
Q Consensus       112 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~C~~C~~-~~~~~~~l~~H~  170 (372)
                      .|.+|...-.+...|..|.....+               -+||.|-. .-.++++|+.|.
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~---------------gqCPYC~~~~e~tesAlQaHf   49 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCIN---------------GQCPYCMTITEATESALQAHY   49 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTT---------------TBCTTTCCBCCSSHHHHHHHH
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCC---------------CCCCcccCcCCcCHHHHHHHH
Confidence            466666666666666666665532               24666643 344556666665

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.82  E-value=0.098  Score=33.15  Aligned_cols=47  Identities=28%  Similarity=0.462  Sum_probs=26.4

Q ss_pred             cccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcCCCCccccccc
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHML  341 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~l~~h~~  341 (372)
                      |.|..||.++ .+..|..|+....+... |.|..|++.|.......|-.
T Consensus        11 F~C~~Cgd~l-KK~kv~~H~~~Cr~~~~-~SCIDC~~~F~~~~y~~Hts   57 (79)
T 1wjv_A           11 FTCNACGESV-KKIQVEKHVSNCRNCEC-LSCIDCGKDFWGDDYKSHVK   57 (79)
T ss_dssp             EEESSSCCEE-ETTHHHHHHHHCTTCCE-EEETTTTEEEEGGGTTTCCC
T ss_pred             EEcCCCCCee-ecccchhHHhhCCCCCc-EEecccCCeeCCCCEeCEee
Confidence            5566666554 35566666555444333 66666666666554444543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=89.11  E-value=0.18  Score=25.30  Aligned_cols=22  Identities=23%  Similarity=0.514  Sum_probs=20.0

Q ss_pred             eeCcccCCcccChhhHHHHHhh
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      ..|.+|.+.+++..+|.+|++.
T Consensus        10 qhcrfckkkysdvknlikhire   31 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4599999999999999999984

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=88.93  E-value=0.035  Score=34.86  Aligned_cols=13  Identities=38%  Similarity=0.892  Sum_probs=8.1

Q ss_pred             ccCCCCCCcCCCC
Q psy16828        322 FECDVCHQIFPTD  334 (372)
Q Consensus       322 ~~C~~C~~~f~~~  334 (372)
                      |+||.|+.-|-..
T Consensus        52 FkCP~CgEEFyG~   64 (95)
T 2k5c_A           52 FKCPVCGEEFYGK   64 (95)
T ss_dssp             EECTTTCCEEETT
T ss_pred             hcCCCccHHHhcc
Confidence            6677776666443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.60  E-value=0.51  Score=24.70  Aligned_cols=25  Identities=16%  Similarity=0.218  Sum_probs=17.4

Q ss_pred             CCCcccCcccccccchhhHHHHHhh
Q psy16828        290 AKPFVCNICGKDFKLKYYVNLHMRT  314 (372)
Q Consensus       290 ~~~~~C~~C~~~f~~~~~l~~H~~~  314 (372)
                      ..++.|..|+.+|.....+..|++.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            3456777777777777777777654

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=88.42  E-value=0.66  Score=29.52  Aligned_cols=35  Identities=20%  Similarity=0.335  Sum_probs=22.9

Q ss_pred             cCcccccCCCCCCCCcccc-CcccccccchhHHhhhhh
Q psy16828          6 LSDTEAIEPKPSKYIKVEC-PVCGKVLSRKSKLVSHMR   42 (372)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~C-~~C~~~f~~~~~l~~H~~   42 (372)
                      .++|..|+... ...+..| ..|+..+. +..|..|+.
T Consensus         2 ~~~l~~H~~~C-~~~~v~C~~~C~~~v~-r~~l~~H~~   37 (76)
T 2yuc_A            2 SSGSSGHLNTC-SFNVIPCPNRCPMKLS-RRDLPAHLQ   37 (76)
T ss_dssp             CCSCSCCCCCC-CCSCCBCTTCCSCBCC-SSSSTTTTT
T ss_pred             chHHHHHHHHC-CCcccCCCccccHHhh-HhHHHhhCH
Confidence            35677777433 5677888 47887774 445777765

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=87.60  E-value=0.069  Score=33.84  Aligned_cols=46  Identities=24%  Similarity=0.413  Sum_probs=37.6

Q ss_pred             CccCCCCCCcCCCCccccccccccCCCceeCcccCCcccChhhHHHH
Q psy16828        321 TFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVH  367 (372)
Q Consensus       321 ~~~C~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H  367 (372)
                      .|.|..|+..+..+.+..|...=.+...|.|-.|+..|.. ...+.|
T Consensus        10 ~F~C~~Cgd~lKK~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           10 FFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEEESSSCCEEETTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEEcCCCCCeeecccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            4999999999999999999876667778999999999975 334444

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=86.09  E-value=0.69  Score=23.19  Aligned_cols=29  Identities=34%  Similarity=0.581  Sum_probs=24.6

Q ss_pred             CCCccccCcccccccchhHHhhhhhccCc
Q psy16828         18 KYIKVECPVCGKVLSRKSKLVSHMRSFHT   46 (372)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   46 (372)
                      ..++-.|..|.+.+.....|..|++..|.
T Consensus         6 skikqhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A            6 SGIKQHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CCCCCEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            34556799999999999999999998664

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=83.25  E-value=0.74  Score=24.87  Aligned_cols=24  Identities=25%  Similarity=0.524  Sum_probs=15.3

Q ss_pred             CCcccCcccccccchhhHHHHHhhh
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      ..|.|+.|+..+.. ..+..|...|
T Consensus         8 ~~~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            8 DQVPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             CEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred             CCcccccccCcCCc-ccccchhhHH
Confidence            34667777777765 4556676555

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=81.62  E-value=2.4  Score=24.47  Aligned_cols=45  Identities=18%  Similarity=0.381  Sum_probs=20.1

Q ss_pred             cccccccccCChHHHHHHHhhhcCCCCcccCcccc-cccchhhHHHHHh
Q psy16828        266 ECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGK-DFKLKYYVNLHMR  313 (372)
Q Consensus       266 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-~f~~~~~l~~H~~  313 (372)
                      .|.+|.....+...|..|...-...   +||+|-. .-.+.++|..|-+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHH
Confidence            3444444444444555554443222   3444432 2234555555533

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=81.62  E-value=0.84  Score=30.83  Aligned_cols=12  Identities=50%  Similarity=0.988  Sum_probs=8.6

Q ss_pred             CCcccCcccccc
Q psy16828        291 KPFVCNICGKDF  302 (372)
Q Consensus       291 ~~~~C~~C~~~f  302 (372)
                      .||+|..||+.|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            467777777777

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	372
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.004
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.004
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.001
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 207 PYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
           PY C+ C K F++  ++  H +  H + +P++C
Sbjct: 5   PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 9e-06
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 288 SDAKPFVCNICGKDFKLKYYVNLHMR-THTRIRPTFECDV 326
           S  KP++C  CGK F    ++N H++  HT  RP  +C V
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 82  PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCE 114
           P  C  CGK  SR D L  HI  VH+  + + C+
Sbjct: 5   PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
           K + C  C        +L  HIK+ HT E
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSE 32

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.004
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 23 ECPVCGKVLSRKSKLVSHMRSFHTSVTP 50
           C  CGK  SR   L  H++  HTS  P
Sbjct: 7  ICQSCGKGFSRPDHLNGHIKQVHTSERP 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
           HS  KP+ C  CGK F     +  H R HT
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.2 bits (74), Expect = 0.004
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 105 VHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
           +HSG K Y C +C + F+    L QH   H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 8e-05
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
           +      + + + C+ CGK F     ++ H RTHT
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 8e-05
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 88  CGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTH 133
           CGK  + K +  RH++     + Y C  C +KF   + L  HM  H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 6e-04
 Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTH 315
           + C+ C K+   +    +HM++H   +P+ C +CGK FK+K+++  HM+ H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHT 316
           + FVC +C + F  + ++  H R+HT
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHT 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHT 316
           KPF C IC ++F    ++  H+RTHT
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
           H+  KP+ C+ C K F+ K  +++H + + 
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 3e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
            S  +PFVC IC   F  K     H++ HT
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHT 31

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHT 316
           K F C  C K F    +++ H++TH 
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQ 26

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 9/36 (25%), Positives = 15/36 (41%)

Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI 318
                +  KPF C  C + F    ++ LH + H  +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.001
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHT 316
           KP+ C  CGK F     +  H R HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 7/29 (24%), Positives = 13/29 (44%)

Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
           K ++C  C         +  HI ++HT+ 
Sbjct: 7   KPYECYICHARFTQSGTMKMHILQKHTEN 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	372
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.63
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.49
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.32
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.31
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.25
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.24
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.18
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.16
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.16
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.16
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.15
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.14
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.08
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.05
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.03
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.02
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.96
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.94
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.92
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.9
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.87
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.86
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.85
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.81
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.72
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.69
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.67
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.63
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.62
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.59
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.57
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.54
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.5
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.46
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.43
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.41
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.39
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.36
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.14
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.12
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.11
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.07
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.05
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.99
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.97
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.95
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.91
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.88
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.87
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.85
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.85
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.77
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.77
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.76
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.72
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.6
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.56
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.55
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.55
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.52
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.49
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.49
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.49
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.46
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.45
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.41
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.4
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.36
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.35
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.29
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.04
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.01
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.97
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.94
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.91
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.69
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.66
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.61
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.56
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.53
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.52
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.51
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.51
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.49
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.49
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.15
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.05
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.82
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.71
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.29
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.28
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.96
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.78
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.66
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.92
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.73
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.07
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.97
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.72
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.62
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.09
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.98
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.83
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.74
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.41
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.07
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.69
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.45
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.19
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.43
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	88.99
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.62
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	88.42
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.69
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.65
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	83.83
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	83.31
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	83.15
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.74
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.36
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	80.98
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.39

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.1e-16  Score=95.78  Aligned_cols=53  Identities=32%  Similarity=0.785  Sum_probs=48.5

Q ss_pred             cCcccccccccccCChHHHHHHHhhhcCCCCcccCcccccccchhhHHHHHhhh
Q psy16828        262 AQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       262 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      ++||+|. ||++|....+|..|+++|+|++||.|++||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4789994 9999999999999999999999999999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=7e-15  Score=87.82  Aligned_cols=53  Identities=23%  Similarity=0.537  Sum_probs=43.3

Q ss_pred             CCCcccccccccccccchHHhHHhhhhccCcccccccccccCChHHHHHHHhhh
Q psy16828        234 HKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALH  287 (372)
Q Consensus       234 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  287 (372)
                      |+||.| .||+.|.....|..|+++|.+++||.|++|+++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            567888 48888888888888888888888888888888888888888888776

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=4.5e-13  Score=71.98  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=32.5

Q ss_pred             ccccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        339 HMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       339 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |.|.|+|||||.|+.|+++|..++.|..|+++|-
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            7899999999999999999999999999999983

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5.1e-13  Score=72.31  Aligned_cols=36  Identities=22%  Similarity=0.412  Sum_probs=34.3

Q ss_pred             ccccccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        337 TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       337 ~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      .+|+++|+++|||.|+.||++|...+.|..|+++|+
T Consensus         1 ~rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           1 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CCCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             CccCcccCCCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            369999999999999999999999999999999996

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.5e-12  Score=69.30  Aligned_cols=32  Identities=25%  Similarity=0.426  Sum_probs=30.6

Q ss_pred             ccccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |+|+|||||.|.+||++|...+.|..|+++|+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            58999999999999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-12  Score=67.05  Aligned_cols=31  Identities=35%  Similarity=0.570  Sum_probs=29.7

Q ss_pred             cccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       342 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      +|+|+|||.|..||++|...+.|..|+++|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            5899999999999999999999999999996

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=2.3e-12  Score=67.48  Aligned_cols=30  Identities=20%  Similarity=0.510  Sum_probs=29.0

Q ss_pred             ccCCCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        343 HDVEKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       343 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |+|||||+|.+|++.|....+|.+|+++|+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            789999999999999999999999999996

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=2.3e-12  Score=69.69  Aligned_cols=37  Identities=27%  Similarity=0.486  Sum_probs=29.1

Q ss_pred             HHHhhhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       282 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      +|+++|++++||.|+.||++|...+.|..|+++|+++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3667788888888888888888888888888887764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=9.4e-12  Score=66.97  Aligned_cols=35  Identities=20%  Similarity=0.633  Sum_probs=18.4

Q ss_pred             cCcccccccccccCChHHHHHHHh-hhcCCCCcccC
Q psy16828        262 AQRFECKLCHKTIVSEKTFKKHMA-LHSDAKPFVCN  296 (372)
Q Consensus       262 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  296 (372)
                      ++||+|.+|+++|...++|..|++ +|+|++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            345555555555555555555543 35555555554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=5.4e-12  Score=67.69  Aligned_cols=35  Identities=26%  Similarity=0.460  Sum_probs=30.4

Q ss_pred             HHhhhcCCCCcccCcccccccchhhHHHHHhhhcC
Q psy16828        283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       283 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      |.++|+|++||+|..|+++|.+.+.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56889999999999999999999999999988854

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=7.9e-12  Score=66.33  Aligned_cols=31  Identities=29%  Similarity=0.624  Sum_probs=28.6

Q ss_pred             ccccCCCceeCcccCCcccChhhHHHHHhhc
Q psy16828        341 LVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       341 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      |+|+|||||.|++|++.|..+..|..|++.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            5899999999999999999999999998653

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=8.8e-12  Score=66.30  Aligned_cols=35  Identities=26%  Similarity=0.649  Sum_probs=30.6

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCCC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      ++|+|++||.|..||++|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57899999999999999999999999999988653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1e-11  Score=64.02  Aligned_cols=33  Identities=39%  Similarity=0.669  Sum_probs=26.4

Q ss_pred             hhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        286 LHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       286 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      +|+|++||.|..||++|.+.+.|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            477888888888888888888888888888764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.5e-11  Score=66.19  Aligned_cols=37  Identities=41%  Similarity=0.854  Sum_probs=32.0

Q ss_pred             CCCCcccCcccccccchhhHHHHHh-hhcCCCCCccCCC
Q psy16828        289 DAKPFVCNICGKDFKLKYYVNLHMR-THTRIRPTFECDV  326 (372)
Q Consensus       289 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~C~~  326 (372)
                      .++||.|..||++|...+.|..|++ +|++++| |+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekp-y~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcC-cCCcC
Confidence            4689999999999999999999975 6888888 88864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=1.7e-11  Score=60.48  Aligned_cols=27  Identities=30%  Similarity=0.634  Sum_probs=25.9

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ||||+|++|++.|.....|..|+++|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            699999999999999999999999995

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.6e-11  Score=64.28  Aligned_cols=34  Identities=26%  Similarity=0.515  Sum_probs=29.0

Q ss_pred             hhhcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       285 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      ++|+|++||.|++|++.|...+.|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4689999999999999999999999998776654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=5.5e-11  Score=62.16  Aligned_cols=32  Identities=38%  Similarity=0.699  Sum_probs=26.0

Q ss_pred             hcCCCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       287 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      |+|++||+|.+|++.|.+.+.|..|+++|.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            57888888888888888888888888888754

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.03  E-value=5.9e-11  Score=67.07  Aligned_cols=40  Identities=20%  Similarity=0.400  Sum_probs=35.4

Q ss_pred             CCCccccccccccCCCceeCcc--cCCcccChhhHHHHHhhcC
Q psy16828        332 PTDFRTKHMLVHDVEKSHLCFV--CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       332 ~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  372 (372)
                      +...+..|+. |+|++||.|.+  |++.|...++|..|+++|+
T Consensus         3 p~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_           3 PRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             CCSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             Ccchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            4456777775 99999999988  9999999999999999996

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=4.1e-11  Score=57.40  Aligned_cols=26  Identities=38%  Similarity=0.756  Sum_probs=25.0

Q ss_pred             CceeCcccCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |||+|..||++|...+.|..|+|+||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999996

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.96  E-value=1.3e-10  Score=57.26  Aligned_cols=28  Identities=43%  Similarity=0.821  Sum_probs=18.1

Q ss_pred             CCCcccCcccccccchhhHHHHHhhhcC
Q psy16828        290 AKPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       290 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      |+||+|+.|+++|...+.|..|+++|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4566666666666666666666666653

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.94  E-value=2.4e-10  Score=57.05  Aligned_cols=27  Identities=33%  Similarity=0.723  Sum_probs=14.5

Q ss_pred             CcccCcccccccchhhHHHHHhhhcCC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      ||.|++|+++|...+.|..|+++|+++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            455555555555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=3e-10  Score=56.57  Aligned_cols=28  Identities=32%  Similarity=0.565  Sum_probs=16.4

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      +||.|++||++|.+.+.|..|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3555666666666666666666665554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.90  E-value=4.7e-10  Score=56.00  Aligned_cols=29  Identities=24%  Similarity=0.722  Sum_probs=25.9

Q ss_pred             CcccccccccccCChHHHHHHHhhhcCCC
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57899999999999999999999999875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=5.1e-10  Score=58.99  Aligned_cols=32  Identities=41%  Similarity=0.901  Sum_probs=20.7

Q ss_pred             ccccc--cccccCChHHHHHHHhhhcCCCCcccC
Q psy16828        265 FECKL--CHKTIVSEKTFKKHMALHSDAKPFVCN  296 (372)
Q Consensus       265 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  296 (372)
                      |.|++  |+++|...+.|+.|+++|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            45555  666666666666666666666666664

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=7.2e-10  Score=55.16  Aligned_cols=29  Identities=28%  Similarity=0.676  Sum_probs=25.6

Q ss_pred             CcccccccccccCChHHHHHHHhhhcCCC
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57899999999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=5.2e-10  Score=53.48  Aligned_cols=26  Identities=42%  Similarity=0.705  Sum_probs=18.7

Q ss_pred             CCcccCcccccccchhhHHHHHhhhc
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                      +||+|..||++|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46777777777777777777777663

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.81  E-value=1.4e-10  Score=65.44  Aligned_cols=39  Identities=33%  Similarity=0.600  Sum_probs=27.6

Q ss_pred             HHHHHhhhcCCCCcccCc--ccccccchhhHHHHHhhhcCCC
Q psy16828        280 FKKHMALHSDAKPFVCNI--CGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       280 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      |..|+. |++++||.|.+  |++.|...+.|..|+++|.+++
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            344553 77777777766  7777777777777777777653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.3e-09  Score=55.78  Aligned_cols=33  Identities=36%  Similarity=0.840  Sum_probs=28.0

Q ss_pred             cccCc--ccccccchhhHHHHHhhhcCCCCCccCCC
Q psy16828        293 FVCNI--CGKDFKLKYYVNLHMRTHTRIRPTFECDV  326 (372)
Q Consensus       293 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~C~~  326 (372)
                      |.|+.  |++.|...+.|.+|+++|++++| |+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC-EeCCC
Confidence            67876  99999999999999999998888 88863

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=4.7e-09  Score=52.46  Aligned_cols=26  Identities=35%  Similarity=0.705  Sum_probs=24.7

Q ss_pred             CceeCcc--cCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFV--CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  372 (372)
                      |||.|++  ||++|...++|+.|+++|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            6899988  9999999999999999996

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.67  E-value=6.3e-09  Score=52.85  Aligned_cols=27  Identities=30%  Similarity=0.573  Sum_probs=25.5

Q ss_pred             CCceeCcc--cCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFV--CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~  372 (372)
                      |+||.|.+  ||+.|....+|.+|+++|+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            68999988  9999999999999999996

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=9.1e-09  Score=51.40  Aligned_cols=26  Identities=31%  Similarity=0.687  Sum_probs=13.4

Q ss_pred             CcccCc--ccccccchhhHHHHHhhhcC
Q psy16828        292 PFVCNI--CGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       292 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ||.|++  |+++|...+.|..|+++|++
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            455544  55555555555555555544

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=6.7e-09  Score=50.73  Aligned_cols=26  Identities=27%  Similarity=0.623  Sum_probs=24.3

Q ss_pred             CceeCcc--cCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFV--CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  372 (372)
                      |||.|+.  ||++|....+|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1e-08  Score=51.34  Aligned_cols=27  Identities=48%  Similarity=1.056  Sum_probs=14.4

Q ss_pred             CCcccCc--ccccccchhhHHHHHhhhcC
Q psy16828        291 KPFVCNI--CGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       291 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  317 (372)
                      +||.|++  |+++|...+.|..|+++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            3555544  55555555555555555544

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.4e-08  Score=50.82  Aligned_cols=28  Identities=21%  Similarity=0.663  Sum_probs=24.2

Q ss_pred             Ccccccc--cccccCChHHHHHHHhhhcCC
Q psy16828        263 QRFECKL--CHKTIVSEKTFKKHMALHSDA  290 (372)
Q Consensus       263 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  290 (372)
                      +||.|++  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4788877  999999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.8e-08  Score=50.16  Aligned_cols=27  Identities=44%  Similarity=0.801  Sum_probs=12.7

Q ss_pred             CcccC--cccccccchhhHHHHHhhhcCC
Q psy16828        292 PFVCN--ICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       292 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      ||.|+  .|++.|...+.|..|+++|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            44442  2555555555555555444443

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=1.4e-08  Score=50.19  Aligned_cols=26  Identities=35%  Similarity=0.632  Sum_probs=24.3

Q ss_pred             CceeCcc--cCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFV--CGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  372 (372)
                      |||.|++  |+++|....+|.+|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            6899988  9999999999999999985

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=3.6e-08  Score=49.79  Aligned_cols=29  Identities=24%  Similarity=0.591  Sum_probs=25.4

Q ss_pred             Cccccc--ccccccCChHHHHHHHhhhcCCC
Q psy16828        263 QRFECK--LCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       263 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      +||.|+  .|+++|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578996  49999999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=5.7e-08  Score=45.29  Aligned_cols=27  Identities=33%  Similarity=0.600  Sum_probs=25.4

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ||||.|.+||+.|....+..+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999983

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=6.3e-08  Score=43.49  Aligned_cols=25  Identities=48%  Similarity=0.824  Sum_probs=23.3

Q ss_pred             ceeCcccCCcccChhhHHHHHhhcC
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |.+|++|++.|+.+..|..|||.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            5789999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.41  E-value=8.8e-08  Score=48.53  Aligned_cols=28  Identities=25%  Similarity=0.608  Sum_probs=18.9

Q ss_pred             CCCcccCc--ccccccchhhHHHHHhhhcC
Q psy16828        290 AKPFVCNI--CGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       290 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ++||.|.+  |++.|+..+.|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46677766  77777777777777776654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.39  E-value=5.4e-08  Score=48.05  Aligned_cols=26  Identities=31%  Similarity=0.825  Sum_probs=14.7

Q ss_pred             CCcccCc--ccccccchhhHHHHHhhhc
Q psy16828        291 KPFVCNI--CGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       291 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  316 (372)
                      +||.|++  |++.|...+.|..|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            3555544  5555555555555555554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=7.1e-08  Score=47.01  Aligned_cols=26  Identities=35%  Similarity=0.816  Sum_probs=18.5

Q ss_pred             CCcccCc--ccccccchhhHHHHHhhhc
Q psy16828        291 KPFVCNI--CGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       291 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  316 (372)
                      +||.|++  |+++|...+.|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777763

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=8.4e-07  Score=40.87  Aligned_cols=27  Identities=33%  Similarity=0.635  Sum_probs=25.5

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |+||+|..|.+...+.++|.-|+|.|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCcceeeecccccCCchheEEeeeccc
Confidence            589999999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=8.5e-07  Score=40.84  Aligned_cols=27  Identities=19%  Similarity=0.556  Sum_probs=15.9

Q ss_pred             CcccccccccccCChHHHHHHHhhhcC
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSD  289 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  289 (372)
                      +||+|.+|++.-.+.+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455666666655566666666666554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1.1e-06  Score=39.40  Aligned_cols=24  Identities=29%  Similarity=0.708  Sum_probs=12.9

Q ss_pred             ccccccccccCChHHHHHHHhhhc
Q psy16828        265 FECKLCHKTIVSEKTFKKHMALHS  288 (372)
Q Consensus       265 ~~C~~C~~~f~~~~~l~~H~~~h~  288 (372)
                      .+|+.|++.|+.+..|..|++.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            345555555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=1.1e-06  Score=40.84  Aligned_cols=27  Identities=37%  Similarity=0.799  Sum_probs=20.1

Q ss_pred             CCCcccCcccccccchhhHHHHHhhhc
Q psy16828        290 AKPFVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       290 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467777777777777777777777663

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.6e-06  Score=40.86  Aligned_cols=27  Identities=15%  Similarity=0.471  Sum_probs=13.1

Q ss_pred             CcccccccccccCChHHHHHHHhhhcC
Q psy16828        263 QRFECKLCHKTIVSEKTFKKHMALHSD  289 (372)
Q Consensus       263 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  289 (372)
                      +||.|++|+..|..+.-+..|++.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            344455555555555445555444443

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2e-06  Score=41.56  Aligned_cols=29  Identities=28%  Similarity=0.627  Sum_probs=15.2

Q ss_pred             ccccccccccCChHHHHHHHhhhcCCCCc
Q psy16828        265 FECKLCHKTIVSEKTFKKHMALHSDAKPF  293 (372)
Q Consensus       265 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  293 (372)
                      ..|..||+.|.+...|.+|...|++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34555555555555555555555555554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.2e-06  Score=40.40  Aligned_cols=29  Identities=38%  Similarity=0.809  Sum_probs=26.5

Q ss_pred             CCCcccCcccccccchhhHHHHHhhhcCC
Q psy16828        290 AKPFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       290 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      ++||.|++|+..|..++.+.-|.+.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999765

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.2e-06  Score=40.50  Aligned_cols=27  Identities=30%  Similarity=0.667  Sum_probs=21.4

Q ss_pred             CCcccCc--ccccccchhhHHHHHhhhcC
Q psy16828        291 KPFVCNI--CGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       291 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  317 (372)
                      +||.|..  |+++++.+++|++|++++|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777866  88888888888888887664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.7e-06  Score=39.74  Aligned_cols=25  Identities=20%  Similarity=0.583  Sum_probs=22.8

Q ss_pred             CceeCcc--cCCcccChhhHHHHHhhc
Q psy16828        347 KSHLCFV--CGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       347 ~~~~C~~--C~~~f~~~~~l~~H~~~h  371 (372)
                      |||.|.+  |++++++++.|++|++.+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            6899977  999999999999999964

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5e-06  Score=38.55  Aligned_cols=26  Identities=35%  Similarity=0.733  Sum_probs=15.1

Q ss_pred             cccCcccccccchhhHHHHHhhhcCC
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      |.|+.||....-++.|.+|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45555665555566666666655554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4.9e-06  Score=40.20  Aligned_cols=30  Identities=40%  Similarity=0.757  Sum_probs=22.5

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      +...|..||+.|.+...|.+|...|++++|
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            345677888888888888888777777776

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=5.3e-06  Score=37.82  Aligned_cols=26  Identities=27%  Similarity=0.515  Sum_probs=24.7

Q ss_pred             CceeCcccCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |||+|..|.+.-.+.+.|.+|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.85  E-value=5.1e-06  Score=36.73  Aligned_cols=24  Identities=29%  Similarity=0.693  Sum_probs=17.5

Q ss_pred             cccCcccccccchhhHHHHHhhhc
Q psy16828        293 FVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       293 ~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                      |+|+.|.++|..+++|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567777777777777777777664

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.85  E-value=5.6e-06  Score=36.60  Aligned_cols=23  Identities=35%  Similarity=0.635  Sum_probs=21.8

Q ss_pred             eeCcccCCcccChhhHHHHHhhc
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      |+|..|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            68999999999999999999987

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.3e-05  Score=37.17  Aligned_cols=27  Identities=26%  Similarity=0.577  Sum_probs=21.9

Q ss_pred             ccccccccccCChHHHHHHHhhhcCCC
Q psy16828        265 FECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       265 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      |.|++|+.....++-|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888888763

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=6.6e-06  Score=42.23  Aligned_cols=28  Identities=32%  Similarity=0.698  Sum_probs=24.8

Q ss_pred             cCCCCcccCcccccccchhhHHHHHhhh
Q psy16828        288 SDAKPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       288 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      +|.+||.|.+|++.|.+++++.+|....
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            4789999999999999999999997543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=8.1e-06  Score=37.21  Aligned_cols=25  Identities=32%  Similarity=0.628  Sum_probs=13.1

Q ss_pred             CCcccCcccccccchhhHHHHHhhh
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      +||+|..|++.-...++|.+|++.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            3455555555555555555555554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=1.5e-05  Score=35.86  Aligned_cols=25  Identities=36%  Similarity=0.646  Sum_probs=14.3

Q ss_pred             cccccccccCChHHHHHHHhhhcCC
Q psy16828        266 ECKLCHKTIVSEKTFKKHMALHSDA  290 (372)
Q Consensus       266 ~C~~C~~~f~~~~~l~~H~~~h~~~  290 (372)
                      .|+.|.++|.++..|+.|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.3e-05  Score=35.80  Aligned_cols=25  Identities=40%  Similarity=0.752  Sum_probs=22.5

Q ss_pred             ceeCcccCCcccChhhHHHHHhhcC
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ...|..||++|...+.|.+|+-+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             cchHHHHhHHHHHHHHHHHHhhccc
Confidence            3579999999999999999999886

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=2e-05  Score=36.61  Aligned_cols=29  Identities=21%  Similarity=0.402  Sum_probs=26.6

Q ss_pred             CccccCcccccccchhHHhhhhhccCcCC
Q psy16828         20 IKVECPVCGKVLSRKSKLVSHMRSFHTSV   48 (372)
Q Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   48 (372)
                      +||.|..|.+.....+.|..|+++.|+.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            58999999999999999999999988754

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=2.7e-05  Score=35.60  Aligned_cols=25  Identities=28%  Similarity=0.619  Sum_probs=18.8

Q ss_pred             cccccccccCChHHHHHHHhhhcCC
Q psy16828        266 ECKLCHKTIVSEKTFKKHMALHSDA  290 (372)
Q Consensus       266 ~C~~C~~~f~~~~~l~~H~~~h~~~  290 (372)
                      .|..|+++|...+.|++|..+|+|+
T Consensus         4 vc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccCC
Confidence            5777777777777777777777764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=1.7e-05  Score=37.76  Aligned_cols=26  Identities=31%  Similarity=0.567  Sum_probs=23.2

Q ss_pred             CceeCcc--cCCcccChhhHHHHH-hhcC
Q psy16828        347 KSHLCFV--CGAGFVNDAGLKVHM-RKHQ  372 (372)
Q Consensus       347 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  372 (372)
                      |||.|.+  |.++|++.++-.+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            6899988  999999999999998 7874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=3.5e-05  Score=34.63  Aligned_cols=26  Identities=42%  Similarity=0.820  Sum_probs=23.7

Q ss_pred             ccCcccccccchhhHHHHHhhhcCCC
Q psy16828        294 VCNICGKDFKLKYYVNLHMRTHTRIR  319 (372)
Q Consensus       294 ~C~~C~~~f~~~~~l~~H~~~h~~~~  319 (372)
                      +|+.|.++|.++..|..|-+.|.+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999998764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=3.5e-05  Score=39.51  Aligned_cols=26  Identities=19%  Similarity=0.354  Sum_probs=23.8

Q ss_pred             cCCCceeCcccCCcccChhhHHHHHh
Q psy16828        344 DVEKSHLCFVCGAGFVNDAGLKVHMR  369 (372)
Q Consensus       344 ~~~~~~~C~~C~~~f~~~~~l~~H~~  369 (372)
                      +|-|||.|..|++.|..+..+-+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47899999999999999999999975

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2e-05  Score=36.45  Aligned_cols=23  Identities=30%  Similarity=0.615  Sum_probs=21.9

Q ss_pred             ccccCcccccccchhHHhhhhhc
Q psy16828         21 KVECPVCGKVLSRKSKLVSHMRS   43 (372)
Q Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~   43 (372)
                      ||.|..|+..|.++..|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            69999999999999999999986

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=3.3e-05  Score=35.72  Aligned_cols=23  Identities=26%  Similarity=0.540  Sum_probs=21.8

Q ss_pred             ceeCcccCCcccChhhHHHHHhh
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      ||.|..|.++|..+.+|.+||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999984

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.46  E-value=3.7e-05  Score=35.43  Aligned_cols=25  Identities=32%  Similarity=0.687  Sum_probs=19.3

Q ss_pred             CCcccCc--ccccccchhhHHHHHhhh
Q psy16828        291 KPFVCNI--CGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       291 ~~~~C~~--C~~~f~~~~~l~~H~~~h  315 (372)
                      .||+|+.  |++.|..++.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677765  888888888888887776

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=5.1e-05  Score=35.26  Aligned_cols=27  Identities=19%  Similarity=0.374  Sum_probs=17.6

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      +||+|..|.+.....+.|..|+++-|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            466666666666666667777666554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.41  E-value=5.1e-05  Score=38.84  Aligned_cols=31  Identities=26%  Similarity=0.657  Sum_probs=23.6

Q ss_pred             CCCcccCcccccccchhhHHHHHhhhcCCCC
Q psy16828        290 AKPFVCNICGKDFKLKYYVNLHMRTHTRIRP  320 (372)
Q Consensus       290 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  320 (372)
                      .+.|.|.+|++.|.+..+|--|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3567888888888888888888888776553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.40  E-value=4.1e-05  Score=36.43  Aligned_cols=27  Identities=22%  Similarity=0.694  Sum_probs=25.2

Q ss_pred             ccccCcccccccchhHHhhhhhccCcC
Q psy16828         21 KVECPVCGKVLSRKSKLVSHMRSFHTS   47 (372)
Q Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~~H~~   47 (372)
                      ||.|.+|++.|.+++-|.+|....|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999999988875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=5.9e-05  Score=34.98  Aligned_cols=27  Identities=33%  Similarity=0.634  Sum_probs=20.7

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      +||+|..|++...+++.|..|++..|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            477888888888888888888776554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.35  E-value=5.3e-05  Score=36.05  Aligned_cols=26  Identities=19%  Similarity=0.586  Sum_probs=21.7

Q ss_pred             CcccCcccccccchhhHHHHHhhhcC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ||.|.+|++.|..++.|.+|...-|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            68899999999999999999765444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=8.5e-05  Score=34.44  Aligned_cols=24  Identities=25%  Similarity=0.475  Sum_probs=22.4

Q ss_pred             CceeCcccCCcccChhhHHHHHhh
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      +||+|.+|.+....+++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            589999999999999999999985

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.00019  Score=31.61  Aligned_cols=22  Identities=27%  Similarity=0.552  Sum_probs=20.7

Q ss_pred             ceeCcccCCcccChhhHHHHHh
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMR  369 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~  369 (372)
                      ||+|..|...|..+.+|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999985

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.01  E-value=0.00022  Score=32.80  Aligned_cols=25  Identities=28%  Similarity=0.623  Sum_probs=18.8

Q ss_pred             Ccccccc--cccccCChHHHHHHHhhh
Q psy16828        263 QRFECKL--CHKTIVSEKTFKKHMALH  287 (372)
Q Consensus       263 ~~~~C~~--C~~~f~~~~~l~~H~~~h  287 (372)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677776  778888888888887776

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.97  E-value=0.00032  Score=35.84  Aligned_cols=30  Identities=20%  Similarity=0.641  Sum_probs=23.1

Q ss_pred             cCcccccccccccCChHHHHHHHhhhcCCC
Q psy16828        262 AQRFECKLCHKTIVSEKTFKKHMALHSDAK  291 (372)
Q Consensus       262 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  291 (372)
                      .+.|+|.+|++.|.+...|--|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            346788888888888888888888886543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00034  Score=31.90  Aligned_cols=24  Identities=29%  Similarity=0.563  Sum_probs=22.2

Q ss_pred             ceeCcccCCcccChhhHHHHHhhc
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~~h  371 (372)
                      |-+|+.|.++.++++.|+-|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            567999999999999999999988

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00017  Score=34.26  Aligned_cols=26  Identities=38%  Similarity=0.728  Sum_probs=14.2

Q ss_pred             CCcccCc--ccccccchhhHHHHH-hhhc
Q psy16828        291 KPFVCNI--CGKDFKLKYYVNLHM-RTHT  316 (372)
Q Consensus       291 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  316 (372)
                      +||.|..  |++.|+..+.-.+|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3555554  666666555555554 4443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.69  E-value=0.00061  Score=30.78  Aligned_cols=22  Identities=23%  Similarity=0.440  Sum_probs=20.0

Q ss_pred             ceeCcccCCcccChhhHHHHHh
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMR  369 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~  369 (372)
                      ||+|+.||+.+..+..|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999999975

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00048  Score=31.26  Aligned_cols=26  Identities=46%  Similarity=0.879  Sum_probs=23.7

Q ss_pred             ccccCcccccccchhHHhhhhhccCc
Q psy16828         21 KVECPVCGKVLSRKSKLVSHMRSFHT   46 (372)
Q Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~~H~   46 (372)
                      +|.||.|+-...++++|+.|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            68999999999999999999997664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.61  E-value=0.00048  Score=30.30  Aligned_cols=24  Identities=29%  Similarity=0.596  Sum_probs=21.9

Q ss_pred             ccccCcccccccchhHHhhhhhcc
Q psy16828         21 KVECPVCGKVLSRKSKLVSHMRSF   44 (372)
Q Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~~   44 (372)
                      ||+|.-|...|-.+.+|+.||-..
T Consensus         2 pykcsscsqqfmqkkdlqshmikl   25 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKL   25 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhc
Confidence            799999999999999999998653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.56  E-value=0.00094  Score=30.67  Aligned_cols=27  Identities=33%  Similarity=0.625  Sum_probs=24.1

Q ss_pred             CCceeCcccCCcccChhhHHHHHhhcC
Q psy16828        346 EKSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       346 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |..|.|..|...|..+-.|+-||-.|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            467999999999999999999998875

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.00096  Score=30.37  Aligned_cols=22  Identities=27%  Similarity=0.505  Sum_probs=10.9

Q ss_pred             ccCcccccccchhhHHHHHhhh
Q psy16828        294 VCNICGKDFKLKYYVNLHMRTH  315 (372)
Q Consensus       294 ~C~~C~~~f~~~~~l~~H~~~h  315 (372)
                      +|+.|+++.+++.+|+.|.+.|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4445555555555555554444

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00094  Score=33.70  Aligned_cols=27  Identities=44%  Similarity=0.763  Sum_probs=24.2

Q ss_pred             CCCceeC--cccCCcccChhhHHHHHhhc
Q psy16828        345 VEKSHLC--FVCGAGFVNDAGLKVHMRKH  371 (372)
Q Consensus       345 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h  371 (372)
                      .+|||.|  +-|+..|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            3799999  77999999999999998877

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.0012  Score=30.26  Aligned_cols=25  Identities=28%  Similarity=0.705  Sum_probs=12.3

Q ss_pred             ccccccccccCChHHHHHHHhhhcC
Q psy16828        265 FECKLCHKTIVSEKTFKKHMALHSD  289 (372)
Q Consensus       265 ~~C~~C~~~f~~~~~l~~H~~~h~~  289 (372)
                      |.|..|...|..+..|+.|+-.|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4444555555555555555544444

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.51  E-value=0.00054  Score=30.27  Aligned_cols=25  Identities=32%  Similarity=0.741  Sum_probs=22.7

Q ss_pred             ccccCcccccccchhHHhhhhhccC
Q psy16828         21 KVECPVCGKVLSRKSKLVSHMRSFH   45 (372)
Q Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~~H   45 (372)
                      .|.|+.|-++|.++..+..|.+..|
T Consensus         1 vypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             CcCCchhhHHhccccCceEEEEEec
Confidence            3889999999999999999998766

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0009  Score=33.78  Aligned_cols=29  Identities=34%  Similarity=0.718  Sum_probs=21.2

Q ss_pred             CCCCccc--CcccccccchhhHHHHHhhhcC
Q psy16828        289 DAKPFVC--NICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       289 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      .++||.|  +-|+.+|.+...|..|+..|..
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~m   33 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhee
Confidence            3677777  5588888888888888777653

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.001  Score=35.34  Aligned_cols=26  Identities=27%  Similarity=0.489  Sum_probs=22.5

Q ss_pred             CceeCcccCCcccChhhHHHHHhhcC
Q psy16828        347 KSHLCFVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       347 ~~~~C~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      ..|.|..||+.|.+...|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45789999999999999999988774

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.15  E-value=0.0019  Score=28.50  Aligned_cols=22  Identities=18%  Similarity=0.418  Sum_probs=20.4

Q ss_pred             eeCcccCCcccChhhHHHHHhh
Q psy16828        349 HLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       349 ~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      |.|++|-+.|..+.++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999985

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.05  E-value=0.003  Score=28.47  Aligned_cols=22  Identities=36%  Similarity=0.567  Sum_probs=16.0

Q ss_pred             CcccCcccccccchhhHHHHHh
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMR  313 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~  313 (372)
                      ||+|+.||+.+-.+..|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5677777777777777777754

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.0024  Score=33.88  Aligned_cols=27  Identities=26%  Similarity=0.444  Sum_probs=23.0

Q ss_pred             CCcccCcccccccchhhHHHHHhhhcC
Q psy16828        291 KPFVCNICGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       291 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ..|.|.+|++.|+....|++|..-|..
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            357899999999999999999877753

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.71  E-value=0.0035  Score=28.83  Aligned_cols=26  Identities=38%  Similarity=0.608  Sum_probs=14.4

Q ss_pred             CcccCc--ccccccchhhHHHHHhhhcC
Q psy16828        292 PFVCNI--CGKDFKLKYYVNLHMRTHTR  317 (372)
Q Consensus       292 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  317 (372)
                      ||.|..  |.+.|.+.-.|.+|..+|.+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            445533  66666666666666555544

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.29  E-value=0.0045  Score=28.47  Aligned_cols=27  Identities=30%  Similarity=0.577  Sum_probs=17.2

Q ss_pred             cccccc--cccccCChHHHHHHHhhhcCC
Q psy16828        264 RFECKL--CHKTIVSEKTFKKHMALHSDA  290 (372)
Q Consensus       264 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  290 (372)
                      ||.|..  |.+.|.+.-.|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455554  666777766777776666653

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.28  E-value=0.0052  Score=29.42  Aligned_cols=23  Identities=26%  Similarity=0.664  Sum_probs=20.7

Q ss_pred             ceeCcccCCcccChhhHHHHHhh
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      .|.|+-||..|+..+.|..|+..
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            48899999999999999999864

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.007  Score=29.28  Aligned_cols=27  Identities=30%  Similarity=0.580  Sum_probs=22.4

Q ss_pred             CcccCcccccccchhhHHHHHhhhcCC
Q psy16828        292 PFVCNICGKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       292 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  318 (372)
                      .|.|..|+++|+.+..+.+|.....+.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            478999999999999999998776653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.011  Score=26.63  Aligned_cols=22  Identities=23%  Similarity=0.576  Sum_probs=11.3

Q ss_pred             eecccccccccCchhHHHHHHh
Q psy16828        111 YPCEQCDRKFTNGYKLKQHMLT  132 (372)
Q Consensus       111 ~~C~~C~~~f~~~~~l~~H~~~  132 (372)
                      |.|+.|+.....+++|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            4455555555555555555443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.0091  Score=28.85  Aligned_cols=22  Identities=23%  Similarity=0.567  Sum_probs=19.5

Q ss_pred             ceeCcccCCcccChhhHHHHHh
Q psy16828        348 SHLCFVCGAGFVNDAGLKVHMR  369 (372)
Q Consensus       348 ~~~C~~C~~~f~~~~~l~~H~~  369 (372)
                      .|.|..||+.|..+..+.+|.-
T Consensus         4 afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhh
Confidence            5899999999999999999863

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.92  E-value=0.018  Score=27.46  Aligned_cols=26  Identities=31%  Similarity=0.450  Sum_probs=22.8

Q ss_pred             CCCccccCcccccccchhHHhhhhhc
Q psy16828         18 KYIKVECPVCGKVLSRKSKLVSHMRS   43 (372)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~   43 (372)
                      +...|.|+-|+..|.+.+.|..|+.-
T Consensus         5 kparf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           5 KPARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             SCCCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             cccceeccccceeecChhHHHhhhhe
Confidence            45679999999999999999999864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.73  E-value=0.028  Score=26.30  Aligned_cols=27  Identities=19%  Similarity=0.546  Sum_probs=19.6

Q ss_pred             cccccc--cccccCChHHHHHHHhhhcCC
Q psy16828        264 RFECKL--CHKTIVSEKTFKKHMALHSDA  290 (372)
Q Consensus       264 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  290 (372)
                      +|.|..  |+..|.....|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            455544  777888888888888887764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.07  E-value=0.03  Score=27.49  Aligned_cols=19  Identities=16%  Similarity=0.281  Sum_probs=14.1

Q ss_pred             cccCChHHHHHHHhhhcCC
Q psy16828        272 KTIVSEKTFKKHMALHSDA  290 (372)
Q Consensus       272 ~~f~~~~~l~~H~~~h~~~  290 (372)
                      +.|.....|..|+++|+|+
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4577777788888887765

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.97  E-value=0.084  Score=24.14  Aligned_cols=25  Identities=20%  Similarity=0.438  Sum_probs=14.4

Q ss_pred             eecCCCCCcccChHHHHHHHHHhcC
Q psy16828        180 VLCTQCGFGCYTNRELEEHQILTHG  204 (372)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~~~~  204 (372)
                      |.|..|++...+...+.-|....+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            4566666666666666666554443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.72  E-value=0.058  Score=24.69  Aligned_cols=25  Identities=32%  Similarity=0.608  Sum_probs=12.9

Q ss_pred             eecccccccccChhHHHHHHHhhcc
Q psy16828         83 VECSYCGKVLSRKDKLTRHIAAVHS  107 (372)
Q Consensus        83 ~~C~~C~~~~~~~~~l~~H~~~~h~  107 (372)
                      |.|..|++...+...+..|+...|+
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            4455555555555555555544443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.62  E-value=0.032  Score=25.32  Aligned_cols=19  Identities=32%  Similarity=0.520  Sum_probs=14.9

Q ss_pred             ccccccchhhHHHHHhhhc
Q psy16828        298 CGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       298 C~~~f~~~~~l~~H~~~h~  316 (372)
                      |++.|++.+++++|+.+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            7788888888888877764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.09  E-value=0.023  Score=32.93  Aligned_cols=40  Identities=25%  Similarity=0.574  Sum_probs=26.2

Q ss_pred             cCCCCcccCcccccccchhhHHHHHhhhcCCCCCccCCCCCCcC
Q psy16828        288 SDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIF  331 (372)
Q Consensus       288 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~C~~~f  331 (372)
                      .+.+.|.|+.|+++|+...++.-    -......|.|..|+...
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L----~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL----FDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH----EETTTTEEBCSSSCCBC
T ss_pred             ccCCceECCCCCCCcchhhHHHh----cCcCCCeEEecCCCCEE
Confidence            34566899999999887665544    22222338888887654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.98  E-value=0.14  Score=26.85  Aligned_cols=30  Identities=30%  Similarity=0.346  Sum_probs=18.8

Q ss_pred             CceeecCCCCCcccChHHHHHHHHHhcCCC
Q psy16828        177 EYSVLCTQCGFGCYTNRELEEHQILTHGAE  206 (372)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  206 (372)
                      +.+-.|++|+.+.....+|++|+..-|-.+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            455667777777666667777666555433

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.83  E-value=0.037  Score=28.25  Aligned_cols=25  Identities=32%  Similarity=0.667  Sum_probs=18.0

Q ss_pred             CccCCCCCCcCCCCccccccccccCCCceeCcccCCc
Q psy16828        321 TFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAG  357 (372)
Q Consensus       321 ~~~C~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~~  357 (372)
                      .|.|++||.++            .|+.|-.|++||..
T Consensus         5 ~~~C~vCG~i~------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           5 VYICPICGYTA------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             EEECTTTCCEE------------ESCCCSBCTTTCCB
T ss_pred             EEECCCCCCEe------------cCCCCCcCCCCCCc
Confidence            48888888753            34567789999864

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.74  E-value=0.055  Score=24.55  Aligned_cols=20  Identities=20%  Similarity=0.542  Sum_probs=17.7

Q ss_pred             ccCCcccChhhHHHHHhhcC
Q psy16828        353 VCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       353 ~C~~~f~~~~~l~~H~~~h~  372 (372)
                      -|++-|.+.+.+++|+-+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            48999999999999998884

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.41  E-value=0.052  Score=27.46  Aligned_cols=25  Identities=24%  Similarity=0.438  Sum_probs=17.3

Q ss_pred             CccCCCCCCcCCCCccccccccccCCCceeCcccCCc
Q psy16828        321 TFECDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAG  357 (372)
Q Consensus       321 ~~~C~~C~~~f~~~~l~~h~~~h~~~~~~~C~~C~~~  357 (372)
                      .|.|++||.+.            .|+.|-+|++||..
T Consensus         5 ~~vC~vCGyi~------------~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           5 FHLCPICGYIH------------KGEDFEKCPICFRP   29 (36)
T ss_dssp             EEECSSSCCEE------------ESSCCSBCTTTCCB
T ss_pred             EEECCCCCCEe------------eCCCCCcCCCCCCc
Confidence            37888887743            34556778888864

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.07  E-value=0.027  Score=33.29  Aligned_cols=26  Identities=31%  Similarity=0.653  Sum_probs=22.6

Q ss_pred             CCCceeCcccCCcccChhhHHHHHhh
Q psy16828        345 VEKSHLCFVCGAGFVNDAGLKVHMRK  370 (372)
Q Consensus       345 ~~~~~~C~~C~~~f~~~~~l~~H~~~  370 (372)
                      |...|.|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            44569999999999999999999874

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.69  E-value=0.035  Score=32.78  Aligned_cols=26  Identities=23%  Similarity=0.388  Sum_probs=23.2

Q ss_pred             CCCccccCcccccccchhHHhhhhhc
Q psy16828         18 KYIKVECPVCGKVLSRKSKLVSHMRS   43 (372)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~   43 (372)
                      |...|-|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            45568999999999999999999975

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.45  E-value=0.067  Score=23.85  Aligned_cols=24  Identities=38%  Similarity=0.652  Sum_probs=19.6

Q ss_pred             eeC--cccCCcccChhhHHHHHhhcC
Q psy16828        349 HLC--FVCGAGFVNDAGLKVHMRKHQ  372 (372)
Q Consensus       349 ~~C--~~C~~~f~~~~~l~~H~~~h~  372 (372)
                      |.|  .-|+++|....+|.-|+.+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            445  359999999999999998874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.19  E-value=0.081  Score=25.90  Aligned_cols=20  Identities=40%  Similarity=0.612  Sum_probs=16.5

Q ss_pred             cccccchhhHHHHHhhhcCC
Q psy16828        299 GKDFKLKYYVNLHMRTHTRI  318 (372)
Q Consensus       299 ~~~f~~~~~l~~H~~~h~~~  318 (372)
                      ++.|.....|..|+++|+++
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            44588999999999999874

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.43  E-value=0.3  Score=25.54  Aligned_cols=31  Identities=32%  Similarity=0.618  Sum_probs=24.9

Q ss_pred             CCCCeecccccccccChhHHHHHHHhhccCc
Q psy16828         79 SRAPVECSYCGKVLSRKDKLTRHIAAVHSGK  109 (372)
Q Consensus        79 ~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~  109 (372)
                      .+.+-.|++|+.+......|++|+...|-.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            4467889999999999999999987766544

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.99  E-value=0.25  Score=24.07  Aligned_cols=30  Identities=17%  Similarity=0.317  Sum_probs=26.1

Q ss_pred             CccccCcccccccchhHHhhhhhccCcCCC
Q psy16828         20 IKVECPVCGKVLSRKSKLVSHMRSFHTSVT   49 (372)
Q Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   49 (372)
                      ++..|-.|-++|.+...+.+|+...|....
T Consensus         2 kkltclecmrtfkssfsiwrhqvevhnqn~   31 (41)
T d1wjpa3           2 KKLTCLECMRTFKSSFSIWRHQVEVHNQNN   31 (41)
T ss_dssp             GGGEEGGGTEECSSHHHHHHHHHHTSCCCC
T ss_pred             CcccHHHHHHHHHHHHHHHHhhheeccccc
Confidence            568899999999999999999998886543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.62  E-value=0.083  Score=25.52  Aligned_cols=31  Identities=23%  Similarity=0.421  Sum_probs=26.6

Q ss_pred             CCCCccccCcccccccchhHHhhhhhccCcC
Q psy16828         17 SKYIKVECPVCGKVLSRKSKLVSHMRSFHTS   47 (372)
Q Consensus        17 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   47 (372)
                      ++...|.|.+|.+.+...+.+-+|..+.|..
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            3567899999999999999999999876753

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.69  E-value=0.18  Score=24.34  Aligned_cols=28  Identities=14%  Similarity=0.368  Sum_probs=17.4

Q ss_pred             CCCCcccCcccccccchhhHHHHHhhhc
Q psy16828        289 DAKPFVCNICGKDFKLKYYVNLHMRTHT  316 (372)
Q Consensus       289 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  316 (372)
                      |+..|.|.+|.+.++.-+.+-+|-.+-|
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            3445667777777776666666654433

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.65  E-value=0.53  Score=26.64  Aligned_cols=26  Identities=23%  Similarity=0.494  Sum_probs=19.2

Q ss_pred             CCCeecccccccccChhHHHHHHHhh
Q psy16828         80 RAPVECSYCGKVLSRKDKLTRHIAAV  105 (372)
Q Consensus        80 ~~~~~C~~C~~~~~~~~~l~~H~~~~  105 (372)
                      ...|+|..|...|.+...|..|+..|
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhc
Confidence            35688888888888888888887443

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.83  E-value=0.22  Score=23.71  Aligned_cols=22  Identities=27%  Similarity=0.496  Sum_probs=19.4

Q ss_pred             CcccccccchhHHhhhhhccCc
Q psy16828         25 PVCGKVLSRKSKLVSHMRSFHT   46 (372)
Q Consensus        25 ~~C~~~f~~~~~l~~H~~~~H~   46 (372)
                      ..|+..|.+...|..|+...|.
T Consensus         7 ~~C~~eFdtQd~LV~HinndHI   28 (32)
T d2glia1           7 DGCSQEFDSQEQLVHHINSEHI   28 (32)
T ss_dssp             TTCCCBCSCHHHHHHHHHHHTS
T ss_pred             cccccccCCHHHHHHHcccccc
Confidence            4699999999999999987665

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.31  E-value=0.93  Score=21.99  Aligned_cols=24  Identities=21%  Similarity=0.499  Sum_probs=21.2

Q ss_pred             CCeecccccccccChhHHHHHHHh
Q psy16828         81 APVECSYCGKVLSRKDKLTRHIAA  104 (372)
Q Consensus        81 ~~~~C~~C~~~~~~~~~l~~H~~~  104 (372)
                      +.|.|..|-+-..+...+.+|+..
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHh
Confidence            779999999999999999999854

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.15  E-value=0.33  Score=27.92  Aligned_cols=29  Identities=17%  Similarity=0.350  Sum_probs=22.6

Q ss_pred             ccCCCCCCCCccccCcccccccchhHHhh
Q psy16828         11 AIEPKPSKYIKVECPVCGKVLSRKSKLVS   39 (372)
Q Consensus        11 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~   39 (372)
                      .-++.-.....|.||.|++.|....+++.
T Consensus         4 ~~~rd~~~~~~y~Cp~C~~~ys~Lda~~L   32 (62)
T d1vd4a_           4 TDERDSTNRASFKCPVCSSTFTDLEANQL   32 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHHH
T ss_pred             hhhhccccCCceECCCCCCCcchhhHHHh
Confidence            34455567788999999999998887754

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.74  E-value=1.1  Score=20.31  Aligned_cols=25  Identities=20%  Similarity=0.578  Sum_probs=15.9

Q ss_pred             eeccc--ccccccChhHHHHHHHhhcc
Q psy16828         83 VECSY--CGKVLSRKDKLTRHIAAVHS  107 (372)
Q Consensus        83 ~~C~~--C~~~~~~~~~l~~H~~~~h~  107 (372)
                      |.|..  |+..|.+...+..|..+.|+
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhcc
Confidence            55544  67777777777777655543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.36  E-value=0.64  Score=26.29  Aligned_cols=26  Identities=19%  Similarity=0.368  Sum_probs=20.9

Q ss_pred             ceeecCCCCCcccChHHHHHHHHHhc
Q psy16828        178 YSVLCTQCGFGCYTNRELEEHQILTH  203 (372)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~~~  203 (372)
                      ..|+|..|+..|.+...|..|+..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            45888888888888888888887775

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.98  E-value=0.58  Score=20.43  Aligned_cols=20  Identities=20%  Similarity=0.373  Sum_probs=15.3

Q ss_pred             eCcccCCcccChhhHHHHHh
Q psy16828        350 LCFVCGAGFVNDAGLKVHMR  369 (372)
Q Consensus       350 ~C~~C~~~f~~~~~l~~H~~  369 (372)
                      .|++|...|..+..-..|..
T Consensus         2 vcpycslrf~sp~lk~ehe~   21 (26)
T d1wjpa2           2 VCPYCSLRFFSPELKQEHES   21 (26)
T ss_dssp             CCTTTCCCBSSHHHHHHHHH
T ss_pred             CCCcceeeeCCHHHhhHhhh
Confidence            48889998888877666653