Psyllid ID: psy16834

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
Protein Sequence
MEHSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATISSEY
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccEccccHHHHHHHHHccccccccccccccEEccccHHHHHcHccccccccccccccccEccccHHHHHHHHHcccccccccccccccccHcHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccccEccccHHHHHHHHcccccccccccccEccccHHHHHHHHccccccccHcccEccccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccEccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHHcccccccEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccccEcccccccccccc
Coil and Loop (DISEMBL)
mehsqedtekfscslcsysvTIKRNLIMHIKRkhtdefsilcpecgrgffnekELAAHKIeihgadpflcipcnkpfskienYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLfdchicgktvvteKNYKKHmqlhsddkpfecQFCRKAFKLKYYLTLHLRthtgvrpmfecdichkvlktkskkssgisknenlrpctlcdKKLASERKLKEHIrkqhptsveADLIRREkyerekvqcpycakfLSRKEKLNRHIRTvhtdvnykceicgeeflsktrynrhvvtheekqkfececgyvtcnkyrltEHVRRthlkdykvlcpicgygcfrnaeLEEHFISahsadrfkcvfceksfarncNLKLHIrryhdksdntecplcgksfpsrgrlnehliqvhpaqkhqchiCNKIVVSEKTLKKHLLLhtnsepfhcpecgkafkfkRYVTLHMrthtgnwptFVCKICnatissey
Flexible Loop (DISEMBL)
mehsqedtekfscslcsySVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMqlhsddkpfECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLktkskkssgisknenlrpctlcdKKLASErklkehirkqhptsveadlirrekyerekvqcpycakflsrkeklnrhirtvhtdvnykceICGEeflsktrynRHVVtheekqkfececgYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIrryhdksdntecPLCGKSFPSRGRLNEHLIQVhpaqkhqcHICNKIVVSEKTLKKHLLLHTnsepfhcpecgKAFKFKRYVTLHMrthtgnwptfvCKICNATISSEY
Low Complexity Region (SEG)
MEHSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLktkskkssgiskNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEktlkkhlllhtNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATISSEY
Disordered region (IsUnstruct)
**********FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLK**********************************************LIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATI****
Disordered Region (DISOPRED)
MEHSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATIS***
Disordered Region (DISEMBL)
***********SCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLK**********KNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATISSEY
Disordered Region (DISPRO)
*****EDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATI****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEHSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATISSEY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	488	2.2.26 [Sep-21-2011]
P10076	861	Zinc finger protein 26 OS	no	N/A	0.952	0.540	0.296	2e-52
P51523	738	Zinc finger protein 84 OS	yes	N/A	0.959	0.634	0.323	5e-50
Q06732	778	Zinc finger protein 33B O	no	N/A	0.907	0.569	0.326	5e-50
Q86UE3	836	Zinc finger protein 546 O	no	N/A	0.915	0.534	0.317	3e-47
Q9N003	741	Zinc finger protein 425 (	N/A	N/A	0.950	0.626	0.306	4e-46
A2VDQ7	687	Zinc finger protein 420 O	no	N/A	0.950	0.675	0.302	1e-45
Q8TAQ5	688	Zinc finger protein 420 O	no	N/A	0.954	0.677	0.298	2e-45
A8MQ14	1090	Zinc finger protein 850 O	no	N/A	0.928	0.415	0.303	2e-45
Q32M78	642	Zinc finger protein 699 O	no	N/A	0.891	0.677	0.314	1e-44
Q6IV72	752	Zinc finger protein 425 O	no	N/A	0.926	0.601	0.298	1e-44

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  207 bits (526), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 230/523 (43%), Gaps = 58/523 (11%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           + C  C  + T + +LI+H+ R+HT E S  C ECG+ F     L  H     G  P+ C
Sbjct: 274 YDCKECGKAFTERSSLIVHL-RQHTREKSYECKECGKTFIQPSRLTEHMRSHTGEKPYQC 332

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVHYAKLFDCHIC 129
             C   F+   +Y     R H      EC IC K   R++ L  H++     K ++C +C
Sbjct: 333 DQCGNAFAS-SSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHTGEKPYECKVC 391

Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKV 189
           GK          H++ H+ ++P+ C  C KAF     LT H++THTG +P F C +C + 
Sbjct: 392 GKAFSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKP-FRCKVCART 450

Query: 190 LKTKS------------------------KKSSGISK------NENLRPCTLCDKKLASE 219
            +  S                           SG++K       E    C  C K  ++ 
Sbjct: 451 FRNSSCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTS 510

Query: 220 RKLKEHIR----------------KQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEK 263
             L EHIR                  H +S+   L  R     +  +C  C K  +R   
Sbjct: 511 SGLVEHIRIHTGEKPFECYQCGKALAHSSSLVGHL--RTHTGEKPFECNQCDKTFTRSSY 568

Query: 264 LNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFEC-ECGYVTCNKYRLTEH 322
           L  H+RT   +  Y+C+ CG+ F  ++   +H+ TH  ++ +EC ECG    +  +LT H
Sbjct: 569 LRIHMRTHTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVH 628

Query: 323 VRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRR 382
           + +TH  +    C +C      ++ LE HF        +KC +C K+F     L +H+R 
Sbjct: 629 I-KTHSSERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRN 687

Query: 383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHT 441
            H    +  C  CGK+F +   L  H I+ H  +K  +C  C K   S   L  HL +HT
Sbjct: 688 -HTGEKSYACQECGKAFSTSSGLIAH-IRSHKGEKPFECDHCGKAFASSSYLNVHLKIHT 745

Query: 442 NSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATI 484
             +PF C  CGK F    Y+ +HMRTHTG  P F C IC  + 
Sbjct: 746 GEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKP-FQCIICGKSF 787

May be involved in transcriptional regulation.
Mus musculus (taxid: 10090)

>sp|P51523|ZNF84_HUMAN Zinc finger protein 84 OS=Homo sapiens GN=ZNF84 PE=1 SV=2

 Score =  199 bits (506), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 220/494 (44%), Gaps = 26/494 (5%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           + CS C    + K +LI H  R H  + +  C  CG+ F  + +   H     G  P+ C
Sbjct: 207 YECSECRKRFSKKPSLIKHQSR-HIRDIAFGCGNCGKTFPQKSQFITHHRTHTGEKPYNC 265

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVHYAKLFDCHIC 129
             C K FS+      HQR  H      EC  C K   R + L  H +     K + C+ C
Sbjct: 266 SQCGKAFSQKSQLTSHQRT-HTGEKPYECGECGKAFSRKSHLISHWRTHTGEKPYGCNEC 324

Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKV 189
           G+    + N   H ++H+ +KPFEC+ C KAF  K  L  H RTHTG +P F C  C K 
Sbjct: 325 GRAFSEKSNLINHQRIHTGEKPFECRECGKAFSRKSQLVTHHRTHTGTKP-FGCSDCRKA 383

Query: 190 LKTKSK--KSSGISKNENLRPCTLCDKKLASERKLKEHIR-----KQH-------PTSVE 235
              KS+  +   I   E    C+ C K       L  H R     K H         S +
Sbjct: 384 FFEKSELIRHQTIHTGEKPYECSECRKAFRERSSLINHQRTHTGEKPHGCIQCGKAFSQK 443

Query: 236 ADLIRRE-KYEREK-VQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYN 293
           + LI  +  +  EK   C  C K  SRK +L RH RT   +  Y+C  CG+ F  K    
Sbjct: 444 SHLISHQMTHTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLT 503

Query: 294 RHVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHF 352
            H   H  ++ + C ECG   C K  L  H +RTH  +    C  CG      + L  H 
Sbjct: 504 NHQRIHTGEKPYVCSECGKAFCQKSHLISH-QRTHTGEKPYECSECGKAFGEKSSLATHQ 562

Query: 353 ISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQV 412
            +      ++C  CEK+F++   L  H +R H      EC LC K+F  +  L  HL + 
Sbjct: 563 RTHTGEKPYECRDCEKAFSQKSQLNTH-QRIHTGEKPYECSLCRKAFFEKSELIRHL-RT 620

Query: 413 HPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN 471
           H  +K ++C+ C K    + +L  H  +HT  +PF C ECGKAF  K ++  H RTHTG 
Sbjct: 621 HTGEKPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGE 680

Query: 472 WPTFVCKICNATIS 485
            P + C  C    S
Sbjct: 681 KP-YGCSECRKAFS 693

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q06732|ZN33B_HUMAN Zinc finger protein 33B OS=Homo sapiens GN=ZNF33B PE=2 SV=2

 Score =  199 bits (505), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 216/468 (46%), Gaps = 25/468 (5%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           F C+ C  +   K +L  H +R HT E    C +CG+ F+ +  L  H+    G  PF C
Sbjct: 329 FECNECGKAFWEKSHLTRH-QRVHTGEKHFQCNQCGKTFWEKSNLTKHQRSHTGEKPFEC 387

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVHYAKLFDCHIC 129
             C K FS      LHQR  H      +C  C K   + + L++H +     K ++C+ C
Sbjct: 388 NECGKAFSHKSALTLHQRT-HTGEKPYQCNACGKTFYQKSDLTKHQRTHTGQKPYECYEC 446

Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKV 189
           GK+     +   H + H+ +KPFEC  C K+F  K +LT H RTH G +P +EC+ C K 
Sbjct: 447 GKSFCMNSHLTVHQRTHTGEKPFECLECGKSFCQKSHLTQHQRTHIGDKP-YECNACGKT 505

Query: 190 LKTKSKKSSGISKNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYERE 247
              KS  +     +  L+P  C  C K    +  L  H              +R     +
Sbjct: 506 FYHKSVLTRHQIIHTGLKPYECYECGKTFCLKSDLTIH--------------QRTHTGEK 551

Query: 248 KVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFEC 307
              CP C KF S K  L++H RT   +  Y+C  CG+ F +K+   +H  TH  ++ +EC
Sbjct: 552 PFACPECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFYNKSYLTKHNRTHTGEKPYEC 611

Query: 308 -ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFC 366
            ECG   C K +LT+H +R H+ +    C  CG      + L  H  +      +KC  C
Sbjct: 612 NECGKTFCQKSQLTQH-QRIHIGEKPYECNECGKAFCHKSALIVHQRTHTQEKPYKCNEC 670

Query: 367 EKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKH-QCHICNK 425
            KSF     L LH R+ H      EC  CGKSF  +  L  H  + H  +K  QC+ C K
Sbjct: 671 GKSFCVKSGLILHERK-HTGEKPYECNECGKSFSHKSSLTVHH-RAHTGEKSCQCNECGK 728

Query: 426 IVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP 473
           I   +  L KH   HT  +P+ C  C K F  K  + +H RTH G  P
Sbjct: 729 IFYRKSDLAKHQRSHTGEKPYECNTCRKTFSQKSNLIVHQRTHIGEKP 776

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q86UE3|ZN546_HUMAN Zinc finger protein 546 OS=Homo sapiens GN=ZNF546 PE=2 SV=2

 Score =  190 bits (482), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 151/476 (31%), Positives = 222/476 (46%), Gaps = 29/476 (6%)

Query: 34  HTDEFSILCPECGRGFFNEKELAAHKIEIH-GADPFLCIPCNKPFSKIENYRLHQRRYHL 92
           H  E S  C EC + F  +  L  H + IH G  P+ C+ C K F ++ + R+H    H 
Sbjct: 211 HAREKSYECKECRKAFRQQSYLIQH-LRIHTGERPYKCMECGKAFCRVGDLRVHHT-IHA 268

Query: 93  NSVNKECKICHKVLRT-ARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKP 151
                ECK C K  R    L+EH +     K ++C  CGK     ++ + H  +H+ ++P
Sbjct: 269 GERPYECKECGKAFRLHYHLTEHQRIHSGVKPYECKECGKAFSRVRDLRVHQTIHAGERP 328

Query: 152 FECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRP--C 209
           +EC+ C KAF+L Y LT H R HTG RP +EC +C K  + +   S     +  ++P  C
Sbjct: 329 YECKECGKAFRLHYQLTEHQRIHTGERP-YECKVCGKTFRVQRHISQHQKIHTGVKPYKC 387

Query: 210 TLCDKKLASERKLKEHIRKQHPT-------------SVEADLIR-REKYEREK-VQCPYC 254
             C K  +    L +H +K H               S  A+L R R  +  EK  +C  C
Sbjct: 388 NECGKAFSHGSYLVQH-QKIHTGEKPYECKECGKSFSFHAELARHRRIHTGEKPYECREC 446

Query: 255 AKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFEC-ECGYVT 313
            K    + +L RH RT   +  Y+C+ CG+ F+   +   H+ TH  +  +EC ECG   
Sbjct: 447 GKAFRLQTELTRHHRTHTGEKPYECKECGKAFICGYQLTLHLRTHTGEIPYECKECGKTF 506

Query: 314 CNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARN 373
            ++Y LT+H  R H  +   +C  CG       EL  H         ++C  C K+F  +
Sbjct: 507 SSRYHLTQHY-RIHTGEKPYICNECGKAFRLQGELTRHHRIHTCEKPYECKECGKAFIHS 565

Query: 374 CNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKT 432
                H +R H       C  CGK F  R  L +H  ++H  +K + C+ C K    +  
Sbjct: 566 NQFISH-QRIHTSESTYICKECGKIFSRRYNLTQHF-KIHTGEKPYICNECGKAFRFQTE 623

Query: 433 LKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATISSEY 488
           L +H  +HT  +P+ C ECGKAF    ++T H R HTG  P + C  C  T S  Y
Sbjct: 624 LTQHHRIHTGEKPYKCTECGKAFIRSTHLTQHHRIHTGEKP-YECTECGKTFSRHY 678

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9N003|ZN425_MACFA Zinc finger protein 425 (Fragment) OS=Macaca fascicularis GN=ZNF425 PE=2 SV=2

 Score =  186 bits (472), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 154/502 (30%), Positives = 231/502 (46%), Gaps = 38/502 (7%)

Query: 9   EKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPF 68
           ++F CS C  S  +K +L+ H +  HT +    CPEC + F     L  H     G  PF
Sbjct: 233 KRFQCSECEKSYFLKGSLVTH-QVVHTGQRPYPCPECDKTFRYRANLKKHLCLHRGERPF 291

Query: 69  LCIPCNKPFSK----IENYRLHQRRYHLNSVNKECKICHKVLRTAR-LSEHMKQVHYAKL 123
            C  C + F +     E+ RLH           +C  C +  R  R +  H+ Q    + 
Sbjct: 292 CCGECGRAFVQQCELTEHLRLHS-----GEKPFQCPQCDRCFRLKRGMKVHLSQHSGKRP 346

Query: 124 FDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
           F C  CG++   +   K H + HS++KPF C  C + F  K  L  H+R HTG +P F C
Sbjct: 347 FHCPECGRSFSRKAALKTHQRTHSEEKPFSCDECGRKFIYKIKLDEHIRVHTGEKP-FSC 405

Query: 184 DICHKVLKTK-SKKSSGISKNENLRP--CTLCDKKLASERKLKEHIR---KQHP---TSV 234
             C+K  + K S K+ G+ ++   RP  C  C +       ++ H R   +Q P      
Sbjct: 406 PECNKSFRLKRSLKAHGL-QHSGKRPFQCPECSRGFFWRNAMRAHQRLHSEQKPFPCAEC 464

Query: 235 EADLIRREK-------YEREK-VQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEF 286
                R  K       ++R+K   C  C K  S++ +L +H++  +T+  + C  CG  F
Sbjct: 465 GKRFTRPSKLACHTRVHDRQKEFPCGECKKTFSQQSRLTQHLKVHNTEKPFSCAECGRSF 524

Query: 287 LSKTRYNRHVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRN 345
             +     H   H  ++ F+C EC      K  +  H +R H  +    C  CG      
Sbjct: 525 RRRAHLTEHTRLHSGEEPFQCPECDKSFSWKASMKFH-QRMHRDEKPFACSECGKTYTHQ 583

Query: 346 AELEEHFISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGR 404
           ++L EH +  HS ++ ++C  C+K+F    NLK H+ + H       C +CGKSF  + R
Sbjct: 584 SQLTEH-LRLHSGEKPYQCPECQKTFRLKGNLKSHLLQ-HSGQKPFSCVMCGKSFTQQYR 641

Query: 405 LNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTL 463
           L EH I+VH  +K  QC  C+K      +LK HL  H+   PF CPECGK F  KR +  
Sbjct: 642 LTEH-IRVHSGEKPFQCPECDKSYCIRGSLKVHLYTHSGERPFQCPECGKGFLQKRSLKA 700

Query: 464 HMRTHTGNWPTFVCKICNATIS 485
           H+  H+G  P F C  C  + +
Sbjct: 701 HLCLHSGERP-FSCDECGRSFT 721

Acts as a transcriptional repressor.

Macaca fascicularis (taxid: 9541)

>sp|A2VDQ7|ZN420_BOVIN Zinc finger protein 420 OS=Bos taurus GN=ZNF420 PE=2 SV=1

 Score =  184 bits (468), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 215/492 (43%), Gaps = 28/492 (5%)

Query: 1   MEHSQEDTEKFSCSLCSY---SVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAA 57
           +E  QE+   FS  +  Y   S+  +   +    R H+ E    C ECG+ F     L  
Sbjct: 96  LEKQQENQAYFSQGMIIYDNMSIFNQHAYLSQHPRCHSTEKPYKCKECGKAFRRASHLTQ 155

Query: 58  HKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMK 116
           H+    G  P+ C  C K FS+     LHQ R H       CK C K   ++++L  H +
Sbjct: 156 HQSIHTGEKPYECKQCGKAFSRDSQLSLHQ-RLHTGEKPYACKECGKAFTQSSQLILHHR 214

Query: 117 QVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
                K + C  CGK  +      +H ++H+ +KP+EC+ C KAF     LTLH R HTG
Sbjct: 215 IHTGEKPYKCEECGKAFIRSSQLTRHQKVHTGEKPYECKECGKAFTQNSQLTLHQRLHTG 274

Query: 177 VRPMFECDICHKVLKTKSK--KSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSV 234
            + ++EC  C KV    S+      I   E    C  C K      +L +H +       
Sbjct: 275 EK-LYECKECRKVFTQLSQLILHKRIHTGEKPYECKECGKAFICGSQLSQHQK------- 326

Query: 235 EADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNR 294
              +   EK      +C  C K   R   L +H R    +  YKCE CG+ F+  ++  +
Sbjct: 327 ---IHNGEK----PYECQECGKAFIRGSLLMQHQRIHTGEKPYKCEECGKAFIRGSQLTQ 379

Query: 295 HVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFI 353
           H   H  ++ +EC ECG    +  +LT+H +R H  +    C  CG    R + L  H  
Sbjct: 380 HQRIHTNEKPYECKECGKTFSHGSQLTQH-QRIHTGEKPYQCKECGKAFNRGSLLTRHQR 438

Query: 354 SAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVH 413
                  ++C  C K+F+R   L  H  R H      EC  CGKSF    +L +H  ++H
Sbjct: 439 IHTGEKPYECKECGKTFSRGSELTQH-ERIHTGEKPYECKECGKSFIRGSQLTQHQ-RIH 496

Query: 414 PAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW 472
             +K ++C  C         L +H  LHT  +P+ C ECGKAF     +  H R HTG  
Sbjct: 497 TGEKPYECKECRMAFTQSSHLSQHQRLHTGEKPYVCNECGKAFARGLLLIQHQRIHTGEK 556

Query: 473 PTFVCKICNATI 484
           P + CK C    
Sbjct: 557 P-YQCKECGKAF 567

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q8TAQ5|ZN420_HUMAN Zinc finger protein 420 OS=Homo sapiens GN=ZNF420 PE=2 SV=1

 Score =  183 bits (465), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 225/496 (45%), Gaps = 30/496 (6%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           ++C  C  + T    LI+H  R HT E    C ECG+ F    +L  H+    G  P+ C
Sbjct: 195 YACKECGKAFTQSSQLILH-HRIHTGEKPYKCEECGKAFIRSSQLTRHQKVHTGEKPYEC 253

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHM--KQVHYA-KLFDCH 127
             C K F++     LHQR  H      ECK C KV    +LS+ +  K++H   K ++C 
Sbjct: 254 KECGKAFTQNSQLTLHQR-LHTGEKLYECKECRKVF--TQLSQLILHKRIHTGEKPYECK 310

Query: 128 ICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICH 187
            CGK  +      +H ++H+ +KP+EC+ C +AF     L  H R HTG +P ++C+ C 
Sbjct: 311 ECGKAFICGSQLSQHQKIHNGEKPYECKECGRAFIRGSLLMQHQRIHTGEKP-YKCEECG 369

Query: 188 KVLKTKSK--KSSGISKNENLRPCTLCDKKLASERKLKEHIR---KQHPTSVE------- 235
           K     S+  +   I  NE    C  C K  +   +L +H R    + P   +       
Sbjct: 370 KAFIRGSQLTQHQRIHTNEKPYECKECGKMFSHGSQLTQHQRIHTGEKPYQCKECGKAFN 429

Query: 236 -ADLIRREK--YEREK-VQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTR 291
              L+ R +  +  EK  +C  C K  SR  +L +H R    +  Y+C+ CG+ F+  ++
Sbjct: 430 RGSLLTRHQRIHTGEKPYECKECGKTFSRGSELTQHERIHTGEKPYECKECGKSFIRGSQ 489

Query: 292 YNRHVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEE 350
             +H   H  ++ +EC EC         L++H +R H  +   +C  CG    R   L +
Sbjct: 490 LTQHQRIHTGEKPYECKECRMAFTQSSHLSQH-QRLHTGEKPYVCNECGKAFARGLLLIQ 548

Query: 351 HFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLI 410
           H         ++C  C K+F R   L  H +R H      EC  CGK+F    +L  H  
Sbjct: 549 HQRIHTGEKPYQCKECGKAFIRGSQLTQH-QRIHTGEKPYECKECGKAFSHGSQLTLHQ- 606

Query: 411 QVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHT 469
           ++H  +K ++C  C K       L +H  +HT  +P+ C ECGKAF     +T H R H 
Sbjct: 607 RIHTGEKPYECRECRKAFTQSSHLSRHQRIHTGEKPYQCKECGKAFTRGSQLTQHQRIHI 666

Query: 470 GNWPTFVCKICNATIS 485
               +F  K C    S
Sbjct: 667 SE-KSFEYKECGIDFS 681

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A8MQ14|ZN850_HUMAN Zinc finger protein 850 OS=Homo sapiens GN=ZNF850 PE=3 SV=2

 Score =  183 bits (465), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/481 (30%), Positives = 220/481 (45%), Gaps = 28/481 (5%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           + C  C  S T +  LI H +  HT E    C ECG+ F +   L  H+    G  P+ C
Sbjct: 533 YHCKECGKSFTFRSGLIGH-QAVHTGEKPYDCKECGKSFTSRSALIQHQRIHTGEKPYHC 591

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRT-ARLSEHMKQVHYA-KLFDCHI 128
             C K F+ + +  L  ++ H      +CK C K  R   RL++H +Q+H   K + C  
Sbjct: 592 KECGKSFT-VGSTLLQHQQIHTGEKPYDCKECGKAFRLRLRLTQH-QQIHTGEKPYQCQE 649

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           CGK  V+     +H ++H+ +KP+EC  C KAF+ + YL  H R HTG +P +EC  C K
Sbjct: 650 CGKAFVSVSGLTQHHRIHTGEKPYECPDCGKAFRQRTYLNQHRRIHTGEKP-YECKECGK 708

Query: 189 VLKTKSKKSSGISKNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYER 246
                S        + + +P     C K   S   L +H ++ H      D         
Sbjct: 709 SFTFCSGLIQHQQNHTDEKPYDGKECGKSFTSHSTLIQH-QQIHTGEKPYD--------- 758

Query: 247 EKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFE 306
               C  C K  +    L +H +    +  Y C+ CG+ F S +   +H   H  ++ + 
Sbjct: 759 ----CKECGKSFTSHSTLIQHQQIHTGEKLYDCKECGKSFTSHSTLIQHQPLHTGEKPYH 814

Query: 307 C-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVF 365
           C ECG     +  L +H R  H  + +  C  CG      + L EH         + C  
Sbjct: 815 CKECGKSFTLRSALIQH-RPVHTGEKRYSCKECGKSFTSRSTLIEHQRIHTGEKPYHCKE 873

Query: 366 CEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICN 424
           C KSFA    +  H RR H      +C  CGK+F  R +L +H  ++H  +K ++CH C 
Sbjct: 874 CGKSFAFRSAIIQH-RRIHTGEKPYDCKECGKAFRRRSKLTQHQ-RIHTGEKPYRCHECG 931

Query: 425 KIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATI 484
           K  V    L KH  +HT  +P+ C  CGK+F+ + ++TLH R HTG+ P + CK C  + 
Sbjct: 932 KAFVRFSGLTKHHSIHTGEKPYECKTCGKSFRQRTHLTLHQRIHTGDRP-YECKECGKSF 990

Query: 485 S 485
           +
Sbjct: 991 T 991

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q32M78|ZN699_HUMAN Zinc finger protein 699 OS=Homo sapiens GN=ZNF699 PE=2 SV=1

 Score =  181 bits (459), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 211/464 (45%), Gaps = 29/464 (6%)

Query: 13  CSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIP 72
           C  C  +     +L  HI R HT      C ECG+ F        H        P+ C  
Sbjct: 197 CHECGKAFVDHSSLKSHI-RSHTGSKPYQCKECGKAFHFLACFKKHMKTPTEEKPYECKE 255

Query: 73  CNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLR-TARLSEHMKQVHYA-KLFDCHICG 130
           C K FS    +R H +  H+   N ECK C K    ++ L+EH K++H   K ++C  CG
Sbjct: 256 CTKAFSCSSFFRAHMK-IHIGKTNYECKECGKGFSCSSSLTEH-KRIHSGDKPYECKECG 313

Query: 131 KTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVL 190
           K      +  KH ++HS DKP+EC+ C KAF    +L +H+R HTG +P +EC  C K  
Sbjct: 314 KAFSCSSSLSKHKRIHSGDKPYECKECGKAFSSSSHLIIHIRIHTGEKP-YECKECGKAF 372

Query: 191 KTKSKKSSGISKNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREK 248
              SK +     +   +P  C  C K       L  H+RK             + YE   
Sbjct: 373 SESSKLTVHGRTHTGEKPYKCKECGKAYNCPSSLSIHMRKH---------TGEKPYE--- 420

Query: 249 VQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFEC- 307
             C  C K       LN H++    +  Y+C+ CG+ F   + +  HV  H  K ++EC 
Sbjct: 421 --CLECGKAFYLPTSLNTHVKNQSREKPYECKECGKAFSCPSSFRAHVRDHTGKIQYECK 478

Query: 308 ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADR-FKCVFC 366
           ECG        LTEH+R TH  +    C  CG     ++ L  H I  H+ ++ ++C  C
Sbjct: 479 ECGKTFSRSSSLTEHLR-THSGEKPYECKECGKAFISSSHLTVH-IRTHTGEKPYECKKC 536

Query: 367 EKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICNK 425
            K+F     L++H+R  H      EC  CGK+F     L  H  ++H  +K  +C  C K
Sbjct: 537 GKAFIYPSALRIHMRT-HTGEKPYECKECGKAFRHSSYLTVH-ARMHTGEKPFECLECGK 594

Query: 426 IVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHT 469
                 + ++H+  HT  +P+ C ECGKAF    Y   H++THT
Sbjct: 595 AFSCPSSFRRHVRSHTGEKPYECKECGKAFVCPAYFRRHVKTHT 638

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6IV72|ZN425_HUMAN Zinc finger protein 425 OS=Homo sapiens GN=ZNF425 PE=2 SV=1

 Score =  181 bits (459), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 214/482 (44%), Gaps = 30/482 (6%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           + C  C  +   + NL  H+   H  E    C ECGR F  + EL  H     G  PF C
Sbjct: 274 YPCPECDKTFRYRANLKKHLCL-HRGERPFCCGECGRAFVQQCELTEHLRLHSGEKPFQC 332

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVHYAKLFDCHIC 129
             C++ F      ++H  + H       C  C +   R A L  H +     K F C  C
Sbjct: 333 PQCDRCFRLKRGMKVHLTQ-HSGKRPFHCPECGRSFSRKAALKTHQRTHSEEKPFSCGEC 391

Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK- 188
           G+  + +    +H+++H+ +KPF C  C K+F+LK  L  H   H G RP F+C  C + 
Sbjct: 392 GRKFIYKIKLDEHIRVHTGEKPFSCPECNKSFRLKRSLKAHGLQHIGKRP-FQCPECSRG 450

Query: 189 -VLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYERE 247
              +   +    +   +   PC  C K+     KL  H R                ++R+
Sbjct: 451 FFWRNAMRAHQRLHSEQKPFPCAECGKRFTRPSKLACHTRV---------------HDRQ 495

Query: 248 K-VQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFE 306
           K   C  C K  S++ +L +H++   T+  + C  CG  F  +     H   H  ++ F+
Sbjct: 496 KEFPCGECKKTFSQQSRLTQHLKVHTTEKPFSCAECGRSFRRRAHLTEHTRLHSGEEPFQ 555

Query: 307 C-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADR-FKCV 364
           C EC      K  +  H +R H  +    C  C       ++L EH +  HS ++ ++C 
Sbjct: 556 CPECDKSFSWKASMKFH-QRMHRDEKPFACGECDKTYTHQSQLTEH-LRLHSGEKPYQCP 613

Query: 365 FCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHIC 423
            CEK+F    NLK H+ + H       C +CGKSF  + RL EH I+VH  +K  QC  C
Sbjct: 614 ECEKTFRLKGNLKSHLLQ-HSGQKPFSCVMCGKSFTQQYRLTEH-IRVHSGEKPFQCPEC 671

Query: 424 NKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNAT 483
           +K      +LK HL  H+   PF CPECGK F  KR +  H+  H+G  P F C  C  +
Sbjct: 672 DKSYCIRGSLKVHLYKHSGERPFQCPECGKGFLQKRSLKAHLCLHSGERP-FSCDECGRS 730

Query: 484 IS 485
            +
Sbjct: 731 FT 732

Acts as a transcriptional repressor.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	488
332028292	1642	Zinc finger protein 91 [Acromyrmex echin	0.963	0.286	0.321	1e-56
326680593	592	PREDICTED: zinc finger protein 721-like,	0.926	0.763	0.319	2e-54
395539648	844	PREDICTED: zinc finger protein 850-like	0.932	0.539	0.344	2e-53
383856780	2186	PREDICTED: uncharacterized protein LOC10	0.954	0.213	0.296	3e-53
328702649	724	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.948	0.639	0.326	5e-53
291413280	867	PREDICTED: zinc finger protein 26-like [	0.930	0.523	0.320	2e-52
326667465	2943	PREDICTED: hypothetical protein LOC57172	0.930	0.154	0.324	2e-52
326667255	908	PREDICTED: zinc finger protein 91-like [	0.954	0.513	0.312	3e-52
432912348	1168	PREDICTED: zinc finger protein Xfin-like	0.954	0.398	0.315	4e-52
351700784	779	Zinc finger protein 26, partial [Heteroc	0.868	0.544	0.319	5e-52

>gi|332028292|gb|EGI68339.1| Zinc finger protein 91 [Acromyrmex echinatior]

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/501 (32%), Positives = 237/501 (47%), Gaps = 31/501 (6%)

Query: 3    HSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEI 62
            H ++  ++F+C +C  S     +L +H K+KH  E+ I C  C +GF+  + L  H +  
Sbjct: 809  HLKQHNKRFTCDICGVSKVSGYDLRLH-KKKHNQEYVIHCETCNKGFYTNQTLERHLLTH 867

Query: 63   HGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICH-KVLRTARLSEHMKQVHYA 121
             G  PF+C  CN P++      +H R  H      +C IC  +    A L  H+K     
Sbjct: 868  TGEKPFICKICNTPYASAAYLNMHMRS-HGEREKHKCNICDFESYWKAALKVHLKIHTGE 926

Query: 122  KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
                C +CGK+V ++   + HM++HS +KP  C+ C KAF ++ YLT+HLRTHTG +P +
Sbjct: 927  NQITCEVCGKSVSSKTYLQIHMRIHSGEKPHVCEVCGKAFSVRKYLTVHLRTHTGEKP-Y 985

Query: 182  ECDICHKVLKTKSKKSSGIS---------KNENLRPCTLCDKKLA---SERKLKEHIRKQ 229
            EC +C K    +   +S +          KN NLR   L +  L    SE+     I  Q
Sbjct: 986  ECKVCQKRFTQQGSLNSHMKSHNESNVQYKNINLRH-ELSEDPLTQKESEKAANGGITHQ 1044

Query: 230  HPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVN-YKCEICGEEFLS 288
            + + ++    R+  YE     C  C K    K     H+   H+D   Y+C++CG+ F  
Sbjct: 1045 NYSGMKKQFNRQTFYE-----CSICTKLFRSKNLFEGHL-VAHSDARPYQCDVCGKCFKR 1098

Query: 289  KTRYNRHVVTHEEKQKFECE-CGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAE 347
                  H   H  ++ F C+ CG+      +L  H +R H + Y   C IC  G F NAE
Sbjct: 1099 TNTLAVHKRIHTHEKNFVCDVCGHAFIQASQLATHYKR-HFEKYTTHCEICNKGFFTNAE 1157

Query: 348  LEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHD---KSDNTECPLCGKSFPSRGR 404
            L  H    H A    C  C KSF  N  L  H+ + HD   K    +C  CGK F  +  
Sbjct: 1158 LHGHMNVKHGAKEHVCTACNKSFPNNHTLARHL-KIHDPNFKPVKHQCEFCGKIFAYKNS 1216

Query: 405  LNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLH 464
            L  H+       K+ CH+C K V S+ +L+ HL LH   +   C  CGKAF  +  + +H
Sbjct: 1217 LVVHVKSHTGENKYDCHLCGKSVSSKGSLQDHLRLHGGEKSLVCDVCGKAFHKRTTLVVH 1276

Query: 465  MRTHTGNWPTFVCKICNATIS 485
             RTHTG  P + C  C  + +
Sbjct: 1277 KRTHTGEKP-YSCDACGKSFT 1296

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326680593|ref|XP_003201566.1| PREDICTED: zinc finger protein 721-like, partial [Danio rerio]

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/482 (31%), Positives = 223/482 (46%), Gaps = 30/482 (6%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH-GADPFL 69
           F+C+ C  S      L  H+ R HT E    C +CG+ F N      H + IH G  PF 
Sbjct: 3   FTCTQCGISFNCSSYLKQHM-RIHTREKPFTCTQCGKSF-NRSSNLDHHMRIHTGEKPFT 60

Query: 70  CIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLR-TARLSEHMKQVHYAKLFDCHI 128
           C  C K F++  N   H R  H       C +C K  R ++ LS+HM+     K F C  
Sbjct: 61  CTQCGKSFNRSSNLDQHIR-IHTGEKPITCTLCGKSFRQSSSLSKHMRTHTGEKPFTCTQ 119

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           CGK+     N+  HM++H+ +KPF C  C K+F+    L  H+RTHTG +P F C  C K
Sbjct: 120 CGKSFSQSSNFNLHMRIHTGEKPFTCTQCGKSFRQASSLNKHMRTHTGEKP-FTCTQCGK 178

Query: 189 VLKTKSKKSSGISKNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYER 246
                S  +  I  +   +P  CT C K       L +H+R                   
Sbjct: 179 SFNRSSTLNQHIRIHTGEKPITCTQCGKSFRQASSLNKHMRIH--------------TGE 224

Query: 247 EKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFE 306
           +   C  C K  S+    N H+R    +  + C  CG+ F+  + +N H+  H  ++ F 
Sbjct: 225 KPFTCTQCGKSFSQSSNFNLHMRIHTGEKPFTCTQCGKSFIQSSNFNLHMRIHTGEKPFT 284

Query: 307 C-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADR-FKCV 364
           C +CG        L +H+ RTH  +    C  CG    R++ L++H I  H+ ++ F C 
Sbjct: 285 CTQCGKSFRRASSLNKHM-RTHTGEKPFTCTQCGKSFNRSSRLDQH-IRIHTREKPFTCT 342

Query: 365 FCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKH-QCHIC 423
            C +SF R+ +L  H+ R H       C  CGKSF     L++H I++H  +K   C  C
Sbjct: 343 ECGRSFNRSSHLNHHM-RIHTGEKPFTCTQCGKSFSRSSYLDQH-IRIHTGEKPITCTQC 400

Query: 424 NKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNAT 483
            K      +L KH+ +HT  +PF C +CGK+F       LHMR HTG  P F C +C  +
Sbjct: 401 GKSFRQSSSLYKHMRIHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKP-FTCTLCGKS 459

Query: 484 IS 485
            +
Sbjct: 460 FN 461

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395539648|ref|XP_003771779.1| PREDICTED: zinc finger protein 850-like [Sarcophilus harrisii]

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 167/485 (34%), Positives = 228/485 (47%), Gaps = 30/485 (6%)

Query: 10  KFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFL 69
           +FSC+ C      K   I HIK  HT E    CP CG+ FF  K L  H+    G  PF 
Sbjct: 367 QFSCNTCGKVFIRKARFITHIKL-HTSENPFHCPVCGKRFFKRKYLLRHQQLHSGKRPFQ 425

Query: 70  CIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHK-VLRTARLSEHMKQVHYAKLFDCHI 128
           C  C K F +    + HQR  H       C  C K      +L+EHM+     K F C  
Sbjct: 426 CPECGKTFCRKSYMKAHQR-LHSTERPFACTQCEKDFTHQYKLTEHMRVHSGEKPFQCPE 484

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           C K+   + + K H +LHS D PF C+ C K F  +Y LT H+R H+G +P F+C  C K
Sbjct: 485 CDKSFSRKSHMKAHRRLHSRDWPFSCRECGKGFTQRYRLTRHMRVHSGEKP-FQCTECGK 543

Query: 189 VLKTKSKKSSGISKNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYER 246
             + K    +    +   RP  C  CDK+   +  +K H R           IR      
Sbjct: 544 SFRQKKSLLNHQLMHTGERPFQCPKCDKRFRLKGNMKAHQRLH-------SGIR------ 590

Query: 247 EKVQCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYNRHVVTHEEKQKF 305
               C  C K  + K KL  H + VHT +  Y C  C + F SK     H   H+ ++ F
Sbjct: 591 -PFSCGVCGKGFTHKSKLTSHTKLVHTGERPYHCPDCNKSFSSKAYVKAHQRIHKGEKPF 649

Query: 306 EC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADR-FKC 363
            C ECG    N++RLTEH+R  H  +    CP C     +   L  H +  H+ +R F+C
Sbjct: 650 SCSECGKNFTNQFRLTEHIR-VHTGEKPFQCPECDKSFRQKRSLINHQL-VHTGERPFQC 707

Query: 364 VFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHI 422
             C KSF     +K H +R H      +C  CGK+F  + RL EH I+VH  +K  QC  
Sbjct: 708 PECNKSFRWKAGMKAH-QRLHRGERPFQCE-CGKNFADQFRLTEH-IRVHTGEKPFQCPE 764

Query: 423 CNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNA 482
           C+K    +++L  H L+HT+ +PF CPEC K+F++K  +  H R H G    F C  C+ 
Sbjct: 765 CDKSFRQKRSLTNHQLVHTSEKPFQCPECNKSFRWKAGMKAHQRLHKGE-RVFSCSECDK 823

Query: 483 TISSE 487
             S +
Sbjct: 824 CFSKQ 828

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|383856780|ref|XP_003703885.1| PREDICTED: uncharacterized protein LOC100882515 [Megachile rotundata]

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 252/529 (47%), Gaps = 63/529 (11%)

Query: 3    HSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEI 62
            H ++  ++F C +C  S     +L +H K+KH +E+   C  CG+GF+  + L  H +  
Sbjct: 822  HLKQHNKRFICDVCGISKVSGYDLRLH-KKKHNEEYVTHCEICGKGFYTNQTLERHLLSH 880

Query: 63   HGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICH-KVLRTARLSEHMKQVHYA 121
             G  PF+C  CN P++       H +  H      +C IC  +    A L  H+K     
Sbjct: 881  TGEKPFICKVCNTPYASAAYLNTHMKS-HGEREKHKCNICSFESYWKAALKVHLKIHSGE 939

Query: 122  KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
             L  C ICGK+V ++   + HM++HS +KP  C+ C KAF ++ YL +HLRTHTG RP +
Sbjct: 940  NLITCEICGKSVSSKAYLQVHMRIHSGEKPHVCEVCGKAFSVRKYLIVHLRTHTGERP-Y 998

Query: 182  ECDICHKVLKTKSKKSSGISKNENLR-------PCTLCD---KKLASERKLKEHIRKQHP 231
            EC +C K    +   +S + K+ N R       P T  D   +KL  E   K+  + Q  
Sbjct: 999  ECKVCQKRFTQQGSLNSHM-KSHNERKSEEWGCPRTGIDLRVRKLPKEVSFKDQPKNQC- 1056

Query: 232  TSVEADLIRREKYEREKVQCPYCAKFLSR-KEKLNRHIRTVHTDVNYKCEICGEEFLSKT 290
                   I+ E    ++++    +  +S+ +E+++  +        Y+C +C + +  + 
Sbjct: 1057 ------FIKEEPISSDELRPEIPSNCVSKNEEEMSDPLALPKIQAFYQCGVCNKLYKMRY 1110

Query: 291  RYNRHVVTHEEKQKFECECGYVTCNKYRLTEHV----RRTHLKDYKVLCPICGYGCFRNA 346
            RY RH+V H + + ++C      C K+  T+ V    +R H  + K +C +CG+ C  N+
Sbjct: 1111 RYERHLVAHSDARPYQCN----VCEKFFKTKDVLKSHKRMHTGEKKHVCDVCGHACSDNS 1166

Query: 347  ELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRL- 405
            +L  H +       F+C  C K+F+R+  L  H +R H      +C  CGKSF  R  L 
Sbjct: 1167 QLATHLLIHSGEKTFRCDVCGKAFSRSSTLVTH-KRTHTGEKPYKCDTCGKSFTQRPTLV 1225

Query: 406  -------------------------NEHLIQ---VHPAQK-HQCHICNKIVVSEKTLKKH 436
                                      EHL +   +H  +K + C IC K     + L+ H
Sbjct: 1226 IHKRYHTGQRPYECDHCSKSFSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMH 1285

Query: 437  LLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATIS 485
              +HT  +P+ C +C KAF  +  +T+H R HTG  P +VC+ICN   S
Sbjct: 1286 RRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERP-YVCQICNRGFS 1333

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328702649|ref|XP_003241967.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein Xfin [Acyrthosiphon pisum]

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 163/499 (32%), Positives = 222/499 (44%), Gaps = 36/499 (7%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           F C +C  S + K NL++H +R HT E    C  C + F    EL  H+    G  PF C
Sbjct: 45  FPCDVCEKSFSQKSNLMIH-RRTHTGEKPFPCDVCDKWFNTNSELMVHRRTHTGEKPFPC 103

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRT-ARLSEHMKQVHYAKLFDCHIC 129
             C K FS+  N  +H RR H       C +C K   T + L+ H +     K F C +C
Sbjct: 104 DVCEKSFSQKSNLMVH-RRTHTGEKPFPCDVCDKWFNTNSELTVHRRTHTGEKPFPCDVC 162

Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKV 189
            K   T  N   H + H+ +KPF C  C K F     LT+H RTHTG +P F CD+C K 
Sbjct: 163 DKWFKTSNNLTVHRRTHTGEKPFPCDVCDKWFNTNSELTVHRRTHTGEKP-FPCDVCDKW 221

Query: 190 LKTKS--KKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQH---------------PT 232
            KT +  K        E   PC +CDK+ +    L  H RK H                T
Sbjct: 222 FKTSNNLKVHRRRHTGEKPFPCDVCDKRFSDYSNLMTH-RKTHMAEKPFPCDVCDKWFKT 280

Query: 233 SVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRY 292
           S    + RR     +   C  C K+ +   +L  H RT   +  + C++C + F  K+  
Sbjct: 281 SNHLTVHRRTHTGEKPFPCDVCDKWFNTNSELMVHRRTHTGEKPFPCDVCEKSFSQKSNL 340

Query: 293 NRHVVTHEEKQKFECECGYVTCNKY-----RLTEHVRRTHLKDYKVLCPICGYGCFRNAE 347
             H  TH   + F C+     C+K+      LT H RRTH  +    C  C        E
Sbjct: 341 MVHWRTHTGDKPFPCD----VCDKWFNTNSELTVH-RRTHTGEKPFPCNACDKWFKTIYE 395

Query: 348 LEEHFISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLN 406
           +  H +  H+ D+ F+C  CEKSF +NCNL  H RR H       C +C KSF  +G L 
Sbjct: 396 MTVH-LRTHTGDKPFQCDVCEKSFTQNCNLMAH-RRTHTGEKPFPCDVCEKSFSQKGILM 453

Query: 407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMR 466
            H       +   C +C+K   +   L  H   HT  +PF C  C K F     +T+H R
Sbjct: 454 VHQRTHTGEKPFPCDVCDKWFKTSNHLTVHRRTHTGEKPFPCDVCDKWFNTNSELTVHRR 513

Query: 467 THTGNWPTFVCKICNATIS 485
           THTG+ P F C +C  + +
Sbjct: 514 THTGDKP-FQCDVCEKSFT 531

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291413280|ref|XP_002722904.1| PREDICTED: zinc finger protein 26-like [Oryctolagus cuniculus]

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 216/480 (45%), Gaps = 26/480 (5%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           F C  C  +      L  H+ R HT E    C  CG+GF     L  H     G  P+ C
Sbjct: 376 FQCDECGKAFASSSYLTAHL-RTHTGEKPFECKMCGKGFTRSSYLRIHTRTHTGEKPYQC 434

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTAR-LSEHMKQVHYAKLFDCHIC 129
             C K F+      +H R  H      ECK C K   + R L+EHMK     K F C +C
Sbjct: 435 KECGKAFTVRSGLNIHLRT-HTGEKPYECKECGKAFTSFRQLAEHMKTHTGEKPFVCDVC 493

Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKV 189
            K+       KKH ++H+  KP++C+ C KAF  +   T H+ THTG RP +EC  C K 
Sbjct: 494 TKSFRNSSCLKKHFRIHTGVKPYQCKECGKAFAGRTGFTTHVLTHTGERP-YECKECGKA 552

Query: 190 LKTKSKKSSGISKNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYERE 247
             T S     +  +   +P  C  C K  AS   L  H+R                   +
Sbjct: 553 FTTSSGLIEHMRSHLREKPFECEQCGKAFASSSYLIAHLRTHTG--------------EK 598

Query: 248 KVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFEC 307
             +C  C K  +R   L+RH+R    +  Y+C+ CG+ F  ++  N H  TH  ++ ++C
Sbjct: 599 PFECAVCGKAFTRSSYLHRHVRIHTGEKPYECKDCGKAFTERSCLNAHSRTHTGERPYKC 658

Query: 308 -ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAE-LEEHFISAHSADRFKCVF 365
            ECG       +LTEH++ TH  +    C +C    FRN+  L++HF        ++C  
Sbjct: 659 KECGKAFTTFPQLTEHIK-THTGEKPFECQVCAKS-FRNSSCLKKHFRIHTGVKPYQCKE 716

Query: 366 CEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNK 425
           C K+FA       H+   H      EC  CGK+F +   L EH       +  +C  C K
Sbjct: 717 CGKAFAGRTGFTTHVLT-HTGERPYECKECGKAFTTSSHLIEHERSHTGEKPFECDQCGK 775

Query: 426 IVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATIS 485
             V+  +L  HL  HT  +PF C  CGKAF++   +  HMRTHTG  P + CK C    +
Sbjct: 776 AFVASSSLNVHLRTHTGEKPFECKMCGKAFRYSSSLCSHMRTHTGEKP-YACKECGKAFT 834

Source: Oryctolagus cuniculus

Species: Oryctolagus cuniculus

Genus: Oryctolagus

Family: Leporidae

Order: Lagomorpha

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667465|ref|XP_700431.5| PREDICTED: hypothetical protein LOC571721 [Danio rerio]

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 236/484 (48%), Gaps = 30/484 (6%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH-GADPFL 69
           FSC  C  + T K+NL++H+ R HT +   +C  CG+ F  +  L  H + IH G  P+ 
Sbjct: 181 FSCHHCGKTFTDKQNLMVHM-RIHTGDKPYICTVCGKNFSQKPSLDVH-VGIHTGEKPYQ 238

Query: 70  CIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVHYAKLFDCHI 128
           C  C K F++ +N ++H    H      +C+ C K   R   L  HM+     K F CH 
Sbjct: 239 CQQCGKSFNRKQNLQVHMS-IHSGDKPYQCQQCGKSFNRKQNLQVHMRIHTGEKPFSCHQ 297

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           CGK+   E N K HM++H+ DKP+ CQ C K+F  K  L +H+R HTG +P ++C  C K
Sbjct: 298 CGKSFSHEHNLKVHMRIHTGDKPYTCQQCGKSFTQKQNLKVHMRIHTGDKP-YQCQECGK 356

Query: 189 VLKTKSKKSSGISKNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYER 246
               K      +  +   +P  C  C++    +  LK H+R          +   EK   
Sbjct: 357 SFIDKQHLKVHMRIHTGDKPYQCQQCERSFDRKENLKVHMR----------IHTGEK--- 403

Query: 247 EKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFE 306
               C  C K L+RK+ L  H+R    D  Y+C+ CG+ F  K  +  H+  H +++ F 
Sbjct: 404 -PFTCHQCGKSLNRKKNLQVHMRIHTGDKPYQCQQCGKSFNRKQNFQVHMRIHTKEKPFS 462

Query: 307 C-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADR-FKCV 364
           C +CG     K  L  H+ R H  D    C  CG    + A L+ H +  HS ++ +KC 
Sbjct: 463 CHQCGRSFNRKQNLKVHM-RVHTGDKPYQCQQCGKSFSQKATLDLH-MRIHSREKPYKCQ 520

Query: 365 FCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHIC 423
            C +SF++  +L  H  R H K     C  CGK F  +  L  H +++H  +K +QC  C
Sbjct: 521 HCGESFSQKAHLTGH-ERVHTKEKPYTCLQCGKCFSLKQNLKLH-VRIHSGEKPYQCQHC 578

Query: 424 NKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNAT 483
            K       L  H  +HT  +P++C +CGK+F  K+ +  H R HTG  P F C+ C  +
Sbjct: 579 GKSFNQRSHLTGHTRVHTKEKPYNCQQCGKSFNQKQKLEFHTRIHTGEKP-FSCQQCGKS 637

Query: 484 ISSE 487
            + +
Sbjct: 638 FAQQ 641

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667255|ref|XP_003198540.1| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 155/496 (31%), Positives = 225/496 (45%), Gaps = 30/496 (6%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           F+C+ C  S     NL  HI R HT E  I C  CG+ F     L+ H     G  PF C
Sbjct: 373 FTCTQCGKSFNRSSNLDQHI-RIHTGEKPITCTLCGKSFRQSSSLSKHMRTHTGEKPFTC 431

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTAR-LSEHMKQVHYAKLFDCHIC 129
             C K FS+  N+ LH R  H       C  C K  R A  L++HM+     K F C  C
Sbjct: 432 TQCGKSFSQSSNFNLHMR-IHTGEKPFTCTQCGKSFRQASSLNKHMRTHTGEKPFTCTQC 490

Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKV 189
           GK+     +  +H+++H+ +KP  C  C K+F+    L  H+R HTG +P F C  C K 
Sbjct: 491 GKSFNRSSHLNQHIRIHTGEKPITCTQCGKSFRQSSSLYKHMRIHTGEKP-FTCTQCGKS 549

Query: 190 LKTKSKKSSGISKNENLRP--CTLCDKKLASERKLKEHIR--------------KQHPTS 233
               S  +  +  +   +P  CT C K       L +H+R              K    +
Sbjct: 550 FSQSSNFNLHMRIHTGEKPITCTQCGKSFHQSSSLYKHMRIHTGEKPFTCTQCGKSFRQA 609

Query: 234 VEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYN 293
              +   R     + + C  C K   +   L +H+R    +  + C  CG+ F   +  N
Sbjct: 610 SSLNKHMRIHTGEKPITCTQCGKSFRQSSSLYKHMRIHTGEKPFTCTQCGKSFRQTSSLN 669

Query: 294 RHVVTHEEKQKFEC-ECGY-VTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEH 351
           +H+  H  ++ F C +CG    C+ Y L +H+R  H  +    C  CG    R++ L+ H
Sbjct: 670 KHMRIHTGEKPFTCTQCGISFNCSSY-LKQHMR-IHTGEKPFTCTQCGRSFNRSSNLDHH 727

Query: 352 FISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLI 410
            +  H+ ++ F C  C KSF R+ NL  HIR  H       C LCGKSF     L++H+ 
Sbjct: 728 -MRIHTGEKPFTCTQCGKSFNRSSNLDQHIR-IHTGEKPITCTLCGKSFRQSSSLSKHM- 784

Query: 411 QVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHT 469
           + H  +K   C  C K       L +H+ +HT  +PF C +CGK+F+    +  HMRTHT
Sbjct: 785 RTHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPFTCTQCGKSFRQASSLNKHMRTHT 844

Query: 470 GNWPTFVCKICNATIS 485
           G  P F C  C  + +
Sbjct: 845 GEKP-FTCTQCGKSFN 859

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432912348|ref|XP_004078886.1| PREDICTED: zinc finger protein Xfin-like [Oryzias latipes]

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 156/494 (31%), Positives = 228/494 (46%), Gaps = 28/494 (5%)

Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           F+C +C    TI   L +H+ R HT E    C  C +GF +   L  H     G  P+ C
Sbjct: 367 FTCDVCGKGFTISSYLKIHM-RIHTGERPYSCDICNKGFVSSGALTGHMRTHTGEKPYSC 425

Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTAR-LSEHMKQVHYAKLFDCHIC 129
             C K F +     +H R  H       C+IC K    A  L+ HM+     + F C IC
Sbjct: 426 KVCQKCFFQSSYLNIHMR-IHTGERPYSCEICKKAFIYANSLTYHMRTHTGERHFTCEIC 484

Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKV 189
            K  +  ++ K HM  H D++P+ C+ C K F  K  L +H+R HTG  P F C++C K+
Sbjct: 485 QKDFMQSRDLKAHMGTHKDERPYSCKVCEKRFTHKSSLNVHMRIHTGETP-FTCEVCGKI 543

Query: 190 LKTKSKKSSGISK--NENLRPCTLCDKKLASERKLKEHIR---KQHPTSVEADLIR---- 240
              +SK  +       E L  C +C K   S R L  H+R    + P S +  L R    
Sbjct: 544 FSQRSKLKAHTRSHTGEKLFSCDICKKVFVSLRNLTCHMRTHTGERPYSCKVCLKRFTQT 603

Query: 241 -------REKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYN 293
                  R         C  C K L +   L  H+RT   +  + CE+CG+ F + +   
Sbjct: 604 SCLNVHMRIHTGERPFTCKVCGKSLIKSSDLKIHMRTHTGERPFTCEVCGKSFTTGSDLK 663

Query: 294 RHVVTHEEKQKFECE-CGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHF 352
            H+ TH  ++ F C+ C     +    T H+R TH       C +C  G  ++ +L+ H 
Sbjct: 664 VHIETHTAEKPFPCDICKKAFASLRSFTCHMR-THTSLRPFTCKLCQKGFMQSRDLKIH- 721

Query: 353 ISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQ 411
           +  H+ +R + C  CEK F+   +L +HIR +  +   T C +CGK+F  R +L  H I+
Sbjct: 722 MRIHTGERPYSCELCEKQFSYKSSLSVHIRTHTGERPFT-CEVCGKTFSQRSKLKAH-IR 779

Query: 412 VHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
            H A+    C IC K+ VS + L  H+  HT   P+ C  C K F    ++ +HMR HTG
Sbjct: 780 THTAENPFSCDICKKVFVSLRNLTCHMKTHTGERPYSCKVCQKCFIQPSHLNIHMRIHTG 839

Query: 471 NWPTFVCKICNATI 484
             P + C IC  T 
Sbjct: 840 ERP-YSCDICKKTF 852

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|351700784|gb|EHB03703.1| Zinc finger protein 26, partial [Heterocephalus glaber]

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 144/451 (31%), Positives = 217/451 (48%), Gaps = 27/451 (5%)

Query: 42  CPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKI 101
           C +CG+ F +   L  H        P+ C  C K F++  +  +H R+ H    + ECK 
Sbjct: 339 CKKCGKFFTHPAYLNIHMQNHPVEKPYKCQECGKAFTQRSSLIVHLRQ-HTREKSYECKE 397

Query: 102 CHKV-LRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKA 160
           C K  ++ +RL+EHM+     K F C  CG    +      H++ H+ +KPFEC  C KA
Sbjct: 398 CGKAFIQPSRLTEHMRCHTGEKPFQCDHCGNAFASSSYLTTHLRTHTGEKPFECNVCGKA 457

Query: 161 FKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRP--CTLCDKKLAS 218
           F    YL  H+RTHTG +P +EC +C K    +S  +  + K+   +P  CTLC+K   S
Sbjct: 458 FTRSSYLLGHIRTHTGEKP-YECKVCGKAFSGRSWLTIHLRKHTGEKPYACTLCEKAFTS 516

Query: 219 ERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVN-Y 277
             +L EH +                   +  QC  CA+       L  H R +HT +  Y
Sbjct: 517 FAQLTEHTKTH--------------TGEKPFQCKVCARTFRNSSCLKTHFR-IHTGIKPY 561

Query: 278 KCEICGEEFLSKTRYNRHVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCP 336
           KC  CG++F +++   +HV+ H  ++ ++C ECG        L EH+R  H  +    C 
Sbjct: 562 KCNFCGKDFTARSGLTKHVLIHNGEKPYDCKECGKAFSTSSALVEHIR-IHTGEKPFECY 620

Query: 337 ICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCG 396
            CG     ++ L  H  S      F+C  CEK+F+R+  L++H+R  H      EC  CG
Sbjct: 621 KCGKALAYSSSLVAHLRSHTGEKPFQCNLCEKAFSRSSYLRIHMRT-HTGEKPYECTECG 679

Query: 397 KSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAF 455
           K+FP R  L +H ++ H  ++ ++C  C K   +   L  HL  HT  + + C ECGKAF
Sbjct: 680 KTFPERSCLTKH-VRTHTGERPYECKECGKDFTARSGLTIHLRNHTGEKSYACQECGKAF 738

Query: 456 KFKRYVTLHMRTHTGNWPTFVCKICNATISS 486
                +  H+R+H G  P F C  C    +S
Sbjct: 739 TTSSGLIAHVRSHKGEKP-FECDHCGKAFAS 768

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	488
UNIPROTKB|J9NT49	778	ZNF33A "Uncharacterized protei	0.922	0.578	0.318	3.8e-62
UNIPROTKB|I3LSS6	977	I3LSS6 "Uncharacterized protei	0.948	0.473	0.313	7.9e-62
MGI|MGI:99173	861	Zfp26 "zinc finger protein 26"	0.928	0.526	0.321	5.5e-61
UNIPROTKB|F1RHD5	799	ZNF546 "Uncharacterized protei	0.946	0.578	0.315	5.5e-61
ZFIN|ZDB-GENE-110913-173	819	si:dkey-78k22.1 "si:dkey-78k22	0.926	0.551	0.324	9e-61
ZFIN|ZDB-GENE-110913-39	639	si:dkey-202n8.1 "si:dkey-202n8	0.965	0.737	0.304	1.2e-60
UNIPROTKB|I3L5E8	713	ZNF248 "Uncharacterized protei	0.918	0.628	0.315	1.2e-60
ZFIN|ZDB-GENE-110913-157	981	si:ch211-245n8.1 "si:ch211-245	0.956	0.476	0.318	1.7e-60
UNIPROTKB|H9L2G0	736	ZNF555 "Uncharacterized protei	0.950	0.630	0.31	2.4e-60
UNIPROTKB|Q06732	778	ZNF33B "Zinc finger protein 33	0.922	0.578	0.316	2.4e-60

UNIPROTKB|J9NT49 ZNF33A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 153/481 (31%), Positives = 226/481 (46%)

Query:     1 MEHSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKI 60
             ++ + +  + F C+ C  +   K +L  H +R HT E    C ECG+ F+ +  L  H+ 
Sbjct:   319 LQKTHKGEKHFECNECRKAFWEKSHLTRH-QRIHTGEKRFQCNECGKTFWEKSNLTKHQR 377

Query:    61 EIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVH 119
                G  P++C  C K FS     RLHQR  H      +C  C K   + + L++H +   
Sbjct:   378 SHTGEKPYVCNDCGKAFSHKSALRLHQRT-HTGEKPYQCNACGKTFYQKSDLTKHQRTHT 436

Query:   120 YAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
               K ++C+ CGK+     +   H + H+ +KPFEC  C K+F  K +LT H RTH G +P
Sbjct:   437 GLKPYECYECGKSFCMNSHLTVHQRTHTGEKPFECPDCGKSFCQKSHLTQHQRTHVGNKP 496

Query:   180 MFECDICHKVLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEAD 237
              +EC+ C K              +  L+P  C  C K    +  L  H ++ H T     
Sbjct:   497 -YECNACGKTFYHKSVLTRHQIIHTGLKPYECYECGKTFCLKSDLTVH-QRTH-TG---- 549

Query:   238 LIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYNRHV 296
                 EK       CP C KF S K  L++H RT HT +  ++C  CG+ F +K+   +H 
Sbjct:   550 ----EK----PFACPECGKFFSHKSTLSQHYRT-HTGEKPFECHECGKIFYNKSYLTKHN 600

Query:   297 VTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYG-CFRNAELEEHFIS 354
              TH  ++ +EC ECG   C K +LT+H +R H+ +    C  CG   C ++A +      
Sbjct:   601 RTHTGEKPYECNECGKTFCQKSQLTQH-QRIHIGEKPYECHECGKAFCHKSALIVHQ--R 657

Query:   355 AHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVH 413
              H+ ++ +KC  C KSF     L LH R+ H      EC  CGK F  +  L  H  + H
Sbjct:   658 THTEEKPYKCNECGKSFCVKSGLILHQRK-HTGEKPYECNECGKCFSHKSSLTVHH-RAH 715

Query:   414 PAQKH-QCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW 472
               +K  QC+ C KI   +             +P+ C  CGK F  K  + +H RTHTG  
Sbjct:   716 TGEKSCQCNECGKIFYRKSDLAKHQRSHTGEKPYECNTCGKTFSQKSNLIVHQRTHTGEK 775

Query:   473 P 473
             P
Sbjct:   776 P 776

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|I3LSS6 I3LSS6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 637 (229.3 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 155/495 (31%), Positives = 229/495 (46%)

Query:     1 MEHSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKI 60
             ++ + +  + F C+ C  +   K +L  H +R HT E    C ECG+ F+ +  L  H+ 
Sbjct:   231 LQKTHKGEKHFECNECGKAFWEKSHLTRH-QRIHTGEKRFQCNECGKTFWEKSNLTKHQR 289

Query:    61 EIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVH 119
                G  P+ C  C K FS      LHQR  H       C  C K   + + L++H +   
Sbjct:   290 SHTGEKPYECNECGKAFSHKSALTLHQRT-HTGEKPYHCNACGKTFYQKSDLTKHQRTHT 348

Query:   120 YAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
               K ++C+ CGK+     +   H + H+ +KPFEC  C K+F  K +LT H RTH G +P
Sbjct:   349 GLKPYECYECGKSFCMNSHLTVHQRTHTGEKPFECPECGKSFCQKSHLTQHQRTHIGDKP 408

Query:   180 MFECDICHKVLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEAD 237
              +EC+ C K              +  L+P  C  C K    +  L  H ++ H T     
Sbjct:   409 -YECNACGKTFYHKSVLTRHQIIHTGLKPYECYECGKTFCLKSDLTVH-QRTH-TG---- 461

Query:   238 LIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYNRHV 296
                 EK       C  C KF S K  L++H RT HT +  Y+C  CG+ F +K+   +H 
Sbjct:   462 ----EK----PFACSECGKFFSHKSTLSQHYRT-HTGEKPYECHECGKIFYNKSYLTKHN 512

Query:   297 VTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYG-CFRNAELEEHFIS 354
              TH  ++ +EC ECG   C K +LT+H +R H+ +    C  CG   C ++A +      
Sbjct:   513 RTHTGEKPYECSECGKTFCQKSQLTQH-QRIHIGEKPYECSECGKAFCHKSALIVHQ--R 569

Query:   355 AHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVH 413
              H+ ++ +KC  C KSF     L LH R+ H      EC  CGKSF  +  L  H  + H
Sbjct:   570 THTEEKPYKCNECGKSFCVKSGLTLHQRK-HTGEKPYECNECGKSFSHKSSLTVHH-RAH 627

Query:   414 PAQKH-QCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW 472
               +K  QC+ C K+   +             +P+ C  CGK F  K  + +H RTHTG  
Sbjct:   628 TGEKSCQCNECGKVFYRKSDLAKHQRSHTGEKPYECNVCGKTFSQKSNLIVHQRTHTGEE 687

Query:   473 PTFVCKICNATISSE 487
             P + C  C  T + +
Sbjct:   688 P-YKCHKCGKTFNQK 701

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

MGI|MGI:99173 Zfp26 "zinc finger protein 26" [Mus musculus (taxid:10090)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 157/489 (32%), Positives = 221/489 (45%)

Query:     3 HSQEDT-EK-FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKI 60
             H +  T EK F C++C  + T    L+ HI R HT E    C  CG+ F     L  H  
Sbjct:   348 HLRTHTGEKPFECNICGKAFTRSSYLLGHI-RTHTGEKPYECKVCGKAFSGRSWLTIHLR 406

Query:    61 EIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTAR-LSEHMKQVH 119
             +  G  P+ C  C K F+       H +  H       CK+C +  R +  L  H + +H
Sbjct:   407 KHTGERPYPCTECEKAFTSFAQLTEHIKT-HTGEKPFRCKVCARTFRNSSCLKTHFR-IH 464

Query:   120 YA-KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVR 178
                K + C+ CGK         KH+ +H+ +KP+EC+ C KAF     L  H+R HTG +
Sbjct:   465 TGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIRIHTGEK 524

Query:   179 PMFECDICHKVLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEA 236
             P FEC  C K L            +   +P  C  CDK       L+ H+R  H T    
Sbjct:   525 P-FECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRT-H-TG--- 578

Query:   237 DLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVN-YKCEICGEEFLSKTRYNRH 295
                  + YE     C  C K    +  L +HIRT HT    Y+C+ CG+ F+S  +   H
Sbjct:   579 ----EKPYE-----CKECGKTFPERSCLTKHIRT-HTGERPYECKECGKGFISFAQLTVH 628

Query:   296 VVTHEEKQKFECE-CGYVTCNKYRLTEHVR-RTHLKDYKVLCPICGYGCFRNAELEEHFI 353
             + TH  ++ F+C+ C     N   L  H R  T +K YK  C  CG      + L  H +
Sbjct:   629 IKTHSSERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYK--CSYCGKAFTARSGLTIH-L 685

Query:   354 SAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQV 412
               H+ ++ + C  C K+F+ +  L  HIR  H      EC  CGK+F S   LN HL ++
Sbjct:   686 RNHTGEKSYACQECGKAFSTSSGLIAHIRS-HKGEKPFECDHCGKAFASSSYLNVHL-KI 743

Query:   413 HPAQK-HQCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMRTHTGN 471
             H  +K  QC +C K                  +PF C  CGK+F +  Y+ +HMR HTG 
Sbjct:   744 HTGEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGE 803

Query:   472 WPTFVCKIC 480
              P +VC+ C
Sbjct:   804 KP-YVCQYC 811

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1RHD5 ZNF546 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 157/498 (31%), Positives = 235/498 (47%)

Query:    16 CSYSVTIKRNLIMHIKRK-HTDEFSILCPECGRGFFNEKELAAHKIEIH-GADPFLCIPC 73
             C+  + I++++ + + +K H  E S  C EC + F  +  L  H + IH G  P+ C  C
Sbjct:   155 CARQMIIQKHISLPLHQKIHAIEKSYECKECRKAFRQQSYLIQH-LRIHTGERPYKCKEC 213

Query:    74 NKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTA-RLSEHMKQVHYA-KLFDCHICGK 131
              K F ++ + R+HQ   H      EC  C K  R    L+EH K++H   K   C  CGK
Sbjct:   214 GKAFCRVGDLRVHQT-IHAGERPYECNNCGKTFRLHYHLTEH-KRIHSGVKPHACKECGK 271

Query:   132 TVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLX 191
                  ++ K H  +H+ ++P+EC+ C K F+L Y LT H R HTG RP ++C IC K   
Sbjct:   272 AFSRVRDLKVHQTIHAGERPYECKDCGKTFRLHYQLTEHQRIHTGERP-YKCKICGKTFR 330

Query:   192 XXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIRKQH----PT---------SVEA 236
                        +  ++P  C  C K  +    L +H +K H    P          S  A
Sbjct:   331 VQRHISQHQKIHTGVKPYKCNDCGKAFSHGSYLVQH-QKIHTGDKPYECKECGKSFSFHA 389

Query:   237 DLIRREK-YEREK-VQCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYN 293
             +L R  + +  EK  +C  C K    + +L RH R +HT +  Y+C+ CG+ F+   +  
Sbjct:   390 ELTRHHRIHTGEKPYECKECGKAFRLQTELTRHCR-IHTGEKPYECKECGKAFICGYQLT 448

Query:   294 RHVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHF 352
              H+  H  +  +EC ECG    ++Y LT+H R  H  +    C  CG      AEL  H 
Sbjct:   449 LHLRAHTGEIPYECKECGKTFSSRYHLTQHYR-IHTGEKPYGCKECGKAFRLQAELTRHH 507

Query:   353 ISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQ 411
                H+ ++ ++C  C K+F R+  L  H +R H   +  EC  CGK F  R  L +H  +
Sbjct:   508 -RIHTCEKPYECKECGKAFIRSNQLISH-QRIHTNENTYECKECGKIFSRRYNLTQHY-K 564

Query:   412 VHPAQK-HQCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
             +H  +K + C  C K+   +             +P+ C ECGKAF    ++T H R HTG
Sbjct:   565 IHTGEKPYLCKECGKVFRFQTELTQHRRIHTGEKPYKCQECGKAFIRSNHLTQHHRIHTG 624

Query:   471 NWPTFVCKICNATISSEY 488
               P + CK C  T S  Y
Sbjct:   625 EKP-YECKECGKTFSRHY 641

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-173 si:dkey-78k22.1 "si:dkey-78k22.1" [Danio rerio (taxid:7955)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 158/487 (32%), Positives = 220/487 (45%)

Query:     9 EK-FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH-GAD 66
             EK F+C+ C  S     NL  HI R HT E  I C  CG+ F     L+ H + IH G  
Sbjct:   135 EKPFTCTQCGKSFNRSSNLDQHI-RIHTGEKPITCTLCGKSFRQSSSLSKH-MRIHTGEK 192

Query:    67 PFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTAR-LSEHMKQVHYAKLFD 125
             PF C  C K FS+  N+ LH R  H       C  C K  R A  L++HM+     K F 
Sbjct:   193 PFTCTQCGKSFSQSSNFNLHMR-IHTGEKPFTCTQCGKSFRQASSLNKHMRTHTGEKPFT 251

Query:   126 CHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDI 185
             C  CGK+     +  +H+++H+ +KP  C  C K+F+    L  H+R HTG +P F C  
Sbjct:   252 CTQCGKSFNRSSHLNQHIRIHTGEKPITCTQCGKSFRQSSSLYKHMRIHTGEKP-FTCTQ 310

Query:   186 CHKVLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREK 243
             C K              +   +P  CT C K       L +H+R  H T         EK
Sbjct:   311 CGKSFSQSSNFNLHMRIHTGEKPITCTQCGKSFHQSSSLYKHMRI-H-TG--------EK 360

Query:   244 YEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVN-YKCEICGEEFLSKTRYNRHVVTHEEK 302
                    C  C K   +   LN+H+R +HT+     C  CG+ F   +  N+H+  H  +
Sbjct:   361 ----PFTCTQCGKSFHQASSLNKHMR-IHTEEKPITCTQCGKSFRQTSSLNKHMRIHTGE 415

Query:   303 QKFEC-ECGY-VTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADR 360
             + F C +CG    C+ Y L +H+R  H  +    C  CG    R++ L+ H +  H+ ++
Sbjct:   416 KPFTCTQCGISFNCSSY-LKQHMR-IHTGEKPFTCTQCGRSFNRSSNLDHH-MRIHTGEK 472

Query:   361 -FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-H 418
              F C  C KSF R+ NL  HIR  H       C LCGKSF     L++H+ + H  +K  
Sbjct:   473 PFTCTQCGKSFNRSSNLDQHIR-IHTGEKPITCTLCGKSFRQSSSLSKHM-RTHTGEKPF 530

Query:   419 QCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK 478
              C  C K                  +PF C +CGK+F+    +  HMR HTG  P F C 
Sbjct:   531 TCTQCGKSFSQSSNFNLHMRIHTGEKPFTCTQCGKSFRQASSLNKHMRIHTGEKP-FTCT 589

Query:   479 ICNATIS 485
              C  + +
Sbjct:   590 QCGKSFN 596

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

ZFIN|ZDB-GENE-110913-39 si:dkey-202n8.1 "si:dkey-202n8.1" [Danio rerio (taxid:7955)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 154/505 (30%), Positives = 231/505 (45%)

Query:     3 HSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEI 62
             H++E  + F+C  C  S   K++   H+ R HT E    C  CG+ F++    AAH + I
Sbjct:    55 HTRE--QLFTCEQCGKSFGQKQSFKAHM-RIHTRERLYTCQLCGKSFYHAGHFAAH-MRI 110

Query:    63 H-GADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTAR-LSEHMKQVHY 120
             H G  PF C  C K FS+  N  +H R  H       C+ C K     R    HM+ +H 
Sbjct:   111 HTGEKPFSCKQCGKSFSQKPNLDVHMR-VHTGEKPYTCEQCGKSFSQKRSFKAHMR-IHT 168

Query:   121 AKL-FDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
              +  + C  CGK+    +N + H ++H+ +KPF C+ CRK F  K  L  H+R HT  +P
Sbjct:   169 GERPYTCQQCGKSFCHARNLEVHKRIHTGEKPFSCKQCRKNFSTKLNLIAHMRVHTREKP 228

Query:   180 MFECDICHKVLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIRK---QHPTS- 233
              + C+ C K L            +   +P  CT C K    +  L  H+R    + P + 
Sbjct:   229 -YTCEQCGKSLGKKQDLYIHMRIHTGEKPYTCTECGKSFPHKNTLNHHMRTHTGEKPFAC 287

Query:   234 VEADLIRREKYEREK----------VQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICG 283
              +       K+  +             C  C K L+RK+ + +H++T   +  ++C  CG
Sbjct:   288 AQCGKSFTTKFSLKNHMNGHTGTIVFTCDQCGKSLTRKDTIKQHMKTHSREDRFRCCECG 347

Query:   284 EEFLSKTRYNRHVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGC 342
             + F SK   N H+  H  +  F C +CG    NK +LT H+R  H  +    C  CG   
Sbjct:   348 KGFKSKRSLNTHMKLHNGENPFNCTQCGKSLANKSKLTIHMR-IHTGEKPFTCTQCGKSF 406

Query:   343 FRNAELEEHFISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPS 401
              R++ L  H +  H+ ++ F C  C KSF+++  L LH+R +  +   T C  CGKSF  
Sbjct:   407 NRSSHLNIH-MRIHTGEKPFTCTQCGKSFSQSSYLNLHMRIHTGEKPFT-CTQCGKSFNC 464

Query:   402 RGRLNEHLIQVHPAQKH-QCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRY 460
                LN+H+ ++H  +K   C  C K                  +PF C +CGK+F     
Sbjct:   465 LAHLNKHM-RIHTGEKPWTCTQCGKSFSQSSSLKHHMRIHTGEKPFTCTQCGKSFSCSSD 523

Query:   461 VTLHMRTHTGNWPTFVCKICNATIS 485
             +  HMR HTG  P F C  C  + S
Sbjct:   524 INRHMRIHTGEKP-FTCTQCGKSFS 547

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|I3L5E8 ZNF248 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 151/479 (31%), Positives = 222/479 (46%)

Query:     1 MEHSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKI 60
             ++ + +  + F C+ C  +   K +L  H +R HT E    C ECG+ F+ +  L  H+ 
Sbjct:   223 LQKTHKGEKHFECNECGKAFWEKSHLTRH-QRIHTGEKRFQCNECGKTFWEKSNLTKHQR 281

Query:    61 EIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVH 119
                G  P+ C  C K FS      LHQR  H       C  C K   + + L++H +   
Sbjct:   282 SHTGEKPYECNECGKAFSHKSALTLHQRT-HTGEKPYHCNACGKTFYQKSDLTKHQRTHT 340

Query:   120 YAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
               K ++C+ CGK+     +   H + H+ +KPFEC  C K+F  K +LT H RTH G +P
Sbjct:   341 GLKPYECYECGKSFCMNSHLTVHQRTHTGEKPFECPECGKSFCQKSHLTQHQRTHIGDKP 400

Query:   180 MFECDICHKVLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEAD 237
              +EC+ C K              +  L+P  C  C K    +  L  H ++ H T     
Sbjct:   401 -YECNACGKTFYHKSVLTRHQIIHTGLKPYECYECGKTFCLKSDLTVH-QRTH-TG---- 453

Query:   238 LIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYNRHV 296
                 EK       C  C KF S K  L++H RT HT +  Y+C  CG+ F +K+   +H 
Sbjct:   454 ----EK----PFACSECGKFFSHKSTLSQHYRT-HTGEKPYECHECGKIFYNKSYLTKHN 504

Query:   297 VTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYG-CFRNAELEEHFIS 354
              TH  ++ +EC ECG   C K +LT+H +R H+ +    C  CG   C ++A +      
Sbjct:   505 RTHTGEKPYECSECGKTFCQKSQLTQH-QRIHIGEKPYECSECGKAFCHKSALIVHQ--R 561

Query:   355 AHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVH 413
              H+ ++ +KC  C KSF     L LH R+ H      EC  CGKSF  +  L  H  + H
Sbjct:   562 THTEEKPYKCNECGKSFCVKSGLTLHQRK-HTGEKPYECNECGKSFSHKSSLTVHH-RAH 619

Query:   414 PAQKH-QCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMRTHTGN 471
               +K   C+ C K+   +             +P+ C  CGK F  K  + +H RTHTGN
Sbjct:   620 TGEKSCXCNECGKVFYRKSDLAKHQRSHTGEKPYECNVCGKTFSQKSNLIVHQRTHTGN 678

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-157 si:ch211-245n8.1 "si:ch211-245n8.1" [Danio rerio (taxid:7955)]

 Score = 625 (225.1 bits), Expect = 1.7e-60, P = 1.7e-60
 Identities = 159/500 (31%), Positives = 226/500 (45%)

Query:     9 EK-FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADP 67
             EK F+C+ C  S     NL  HI R HT E  I C  CG+ F     L+ H     G  P
Sbjct:   451 EKPFTCTQCGKSFNRSSNLDQHI-RIHTGEKPITCTLCGKSFRQSSSLSKHMRTHTGEKP 509

Query:    68 FLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTAR-LSEHMKQVHYAKLFDC 126
             F C  C K FS+  N+ LH R  H       C  C K  R A  L++HM+     K F C
Sbjct:   510 FTCTQCGKSFSQSSNFNLHMR-IHTGEKPFTCTQCGKSFRQASSLNKHMRTHTGEKPFTC 568

Query:   127 HICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
               CGK+     +  +H+++H+ +KP  C  C K+F+    L  H+R HTG +P F C  C
Sbjct:   569 TQCGKSFNRSSHLNQHIRIHTGEKPITCTQCGKSFRQSSSLYKHMRIHTGEKP-FTCTQC 627

Query:   187 HKVLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIR---KQHP-TSVEADLIR 240
              K              +   +P  CT C K       L +H+R    + P T  +     
Sbjct:   628 GKSFSQSSNFNLHMRIHTGEKPITCTQCGKSFHQSSSLYKHMRIHTGEKPFTCTQCGKSF 687

Query:   241 RE-----KYER----EK-VQCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSK 289
             R+     K+ R    EK + C  C K   +   L +H+R +HT +  + C  CG+ F   
Sbjct:   688 RQASSLNKHMRIHTGEKPITCTQCGKSFRQSSSLYKHMR-IHTGEKPFTCTQCGKSFRQT 746

Query:   290 TRYNRHVVTHEEKQKFEC-ECGY-VTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAE 347
             +  N+H+  H  ++ F C +CG    C+ Y L +H+R  H  +    C  CG    R++ 
Sbjct:   747 SSLNKHMRIHTGEKPFTCTQCGISFNCSSY-LKQHMR-IHTGEKPFTCTQCGRSFNRSSN 804

Query:   348 LEEHFISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLN 406
             L+ H +  H+ ++ F C  C KSF R+ NL  HIR  H       C LCGKSF     L+
Sbjct:   805 LDHH-MRIHTGEKPFTCTQCGKSFNRSSNLDQHIR-IHTGEKPITCTLCGKSFRQSSSLS 862

Query:   407 EHLIQVHPAQK-HQCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHM 465
             +H+ + H  +K   C  C K                  +PF C +CGK+F+    +  HM
Sbjct:   863 KHM-RTHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPFTCTQCGKSFRQASSLNKHM 921

Query:   466 RTHTGNWPTFVCKICNATIS 485
             RTHTG  P F C  C  + +
Sbjct:   922 RTHTGEKP-FTCTQCGKSFN 940

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|H9L2G0 ZNF555 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 155/500 (31%), Positives = 231/500 (46%)

Query:    11 FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
             + CS C  S     +LI+H +R HT E    C ECG+ + +  +L  H+    G  P+ C
Sbjct:   123 YKCSECGKSFKSSSDLIVH-QRIHTGERPYKCAECGKSYKSNGDLKYHERSHTGERPYKC 181

Query:    71 IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTA-RLSEHMKQVHYAKL-FDCHI 128
               C K F    +   HQ   H      +C  C K  +++  L+ H + +H  +  F C  
Sbjct:   182 PQCGKCFKNSSHLNRHQHT-HTGWRPYKCCECGKSFKSSSHLTCHQR-IHTGERPFRCPE 239

Query:   129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
             CGK+  +  +   H ++H+ ++PF+C  C K+FK  Y LT H R HTG RP F+C  C K
Sbjct:   240 CGKSFNSSSHLTCHQRIHTGERPFKCSECGKSFKSSYNLTCHQRIHTGERP-FKCSECGK 298

Query:   189 VLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIR---KQHPTSVEA------- 236
                           +   RP  C+ C+K   S  +LK+H R   ++ P    A       
Sbjct:   299 SFKSSYELKLHQRIHTGERPYKCSACEKSFKSNSELKQHQRTHTEERPYKCPACGKCFRS 358

Query:   237 --DLIRREKYEREK--VQCPYCAKFLSRKEKLNRHIRTVHTDVN-YKCEICGEEFLSKTR 291
               +L + ++  R++   QCP C K   R+  L +H + +HT    ++C  CG+ F   + 
Sbjct:   359 GSELKQHQRIHRQERPFQCPVCGKSFKRRPDLKQH-QLIHTGGRPFQCSSCGKTFKICSE 417

Query:   292 YNRHVVTHEEKQKFEC-ECGYVTCNKYR--LTEHVRRTHLKDYKVLCPICGYGCFRNAEL 348
              N H   H E++ F+C ECG   C K R  L  H +R H  +    C  CG     N+EL
Sbjct:   418 LNLHQRIHTEERPFQCPECG--KCFKRRSVLKLH-QRIHTGERPYKCSDCGKSFKSNSEL 474

Query:   349 EEHFISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNE 407
             + H    H+ +R +KC  C K F+R+ +L  H R  H +    +CP C KSF S   L +
Sbjct:   475 KLHQ-RTHTEERPYKCSECGKCFSRSSHLNFH-RHVHTRERPFQCPACEKSFKSSSELKK 532

Query:   408 HLIQVHPAQK-HQCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMR 466
             H  ++H  ++  QC  C K                   PF CPECGK F+    + LH R
Sbjct:   533 HQ-RIHRGERPFQCSECGKSFKRSSHLTCHQHIHTGERPFLCPECGKTFRISSELKLHQR 591

Query:   467 THTGNWPTFVCKICNATISS 486
              HT + P + C  C  +  S
Sbjct:   592 IHTEDRP-YKCSECGKSFKS 610

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q06732 ZNF33B "Zinc finger protein 33B" [Homo sapiens (taxid:9606)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 152/481 (31%), Positives = 222/481 (46%)

Query:     1 MEHSQEDTEKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKI 60
             ++   +  + F C+ C  +   K +L  H +R HT E    C +CG+ F+ +  L  H+ 
Sbjct:   319 LQKGDKGEKHFECNECGKAFWEKSHLTRH-QRVHTGEKHFQCNQCGKTFWEKSNLTKHQR 377

Query:    61 EIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVH 119
                G  PF C  C K FS      LHQR  H      +C  C K   + + L++H +   
Sbjct:   378 SHTGEKPFECNECGKAFSHKSALTLHQRT-HTGEKPYQCNACGKTFYQKSDLTKHQRTHT 436

Query:   120 YAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
               K ++C+ CGK+     +   H + H+ +KPFEC  C K+F  K +LT H RTH G +P
Sbjct:   437 GQKPYECYECGKSFCMNSHLTVHQRTHTGEKPFECLECGKSFCQKSHLTQHQRTHIGDKP 496

Query:   180 MFECDICHKVLXXXXXXXXXXXXNENLRP--CTLCDKKLASERKLKEHIRKQHPTSVEAD 237
              +EC+ C K              +  L+P  C  C K    +  L  H ++ H T     
Sbjct:   497 -YECNACGKTFYHKSVLTRHQIIHTGLKPYECYECGKTFCLKSDLTIH-QRTH-TG---- 549

Query:   238 LIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYNRHV 296
                 EK       CP C KF S K  L++H RT HT +  Y+C  CG+ F +K+   +H 
Sbjct:   550 ----EK----PFACPECGKFFSHKSTLSQHYRT-HTGEKPYECHECGKIFYNKSYLTKHN 600

Query:   297 VTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYG-CFRNAELEEHFIS 354
              TH  ++ +EC ECG   C K +LT+H +R H+ +    C  CG   C ++A +      
Sbjct:   601 RTHTGEKPYECNECGKTFCQKSQLTQH-QRIHIGEKPYECNECGKAFCHKSALIVHQ--R 657

Query:   355 AHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVH 413
              H+ ++ +KC  C KSF     L LH R+ H      EC  CGKSF  +  L  H  + H
Sbjct:   658 THTQEKPYKCNECGKSFCVKSGLILHERK-HTGEKPYECNECGKSFSHKSSLTVHH-RAH 715

Query:   414 PAQKH-QCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW 472
               +K  QC+ C KI   +             +P+ C  C K F  K  + +H RTH G  
Sbjct:   716 TGEKSCQCNECGKIFYRKSDLAKHQRSHTGEKPYECNTCRKTFSQKSNLIVHQRTHIGEK 775

Query:   473 P 473
             P
Sbjct:   776 P 776

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51523	ZNF84_HUMAN	No assigned EC number	0.3238	0.9590	0.6341	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	488
KOG1074|consensus	958		99.98
KOG2462|consensus	279		99.96
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.96
KOG3608|consensus	467		99.95
KOG3608|consensus	467		99.93
KOG3623|consensus	1007		99.89
KOG3623|consensus	1007		99.87
KOG3576|consensus	267		99.68
KOG3576|consensus	267		99.68
PLN03086	567	PRLI-interacting factor K; Provisional	99.39
PLN03086	567	PRLI-interacting factor K; Provisional	99.26
PHA00733	128	hypothetical protein	99.24
PHA00733	128	hypothetical protein	99.17
PHA02768	55	hypothetical protein; Provisional	99.15
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.96
KOG3993|consensus	500		98.89
PHA02768	55	hypothetical protein; Provisional	98.88
KOG3993|consensus	500		98.85
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.76
PHA00616	44	hypothetical protein	98.65
PHA00732	79	hypothetical protein	98.56
PHA00616	44	hypothetical protein	98.55
PHA00732	79	hypothetical protein	98.42
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.26
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.16
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.03
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.81
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.7
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.6
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.57
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.56
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.48
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.44
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.21
smart00355	26	ZnF_C2H2 zinc finger.	97.09
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.07
PRK04860	160	hypothetical protein; Provisional	96.99
smart00355	26	ZnF_C2H2 zinc finger.	96.88
KOG2231|consensus	669		96.86
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.85
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.77
KOG2785|consensus	390		96.59
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.37
KOG2231|consensus	669		96.29
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.24
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.07
PRK04860	160	hypothetical protein; Provisional	95.91
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.87
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.85
KOG1146|consensus	1406		95.71
KOG2482|consensus	423		95.7
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.58
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.51
KOG1146|consensus	1406		95.32
KOG2482|consensus	423		95.23
KOG2785|consensus	390		95.08
COG5048	467	FOG: Zn-finger [General function prediction only]	95.0
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.54
KOG4173|consensus	253		94.11
KOG4173|consensus	253		93.86
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.79
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.18
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.92
COG5048	467	FOG: Zn-finger [General function prediction only]	92.7
KOG2893|consensus	341		92.37
KOG2893|consensus	341		91.59
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.57
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	91.53
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.68
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	88.21
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.4
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	85.12
KOG2186|consensus	276		84.92
COG4049	65	Uncharacterized protein containing archaeal-type C	84.92
COG4049	65	Uncharacterized protein containing archaeal-type C	83.52
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.36
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	81.11

>KOG1074|consensus

Probab=99.98  E-value=1.3e-33  Score=273.85  Aligned_cols=226  Identities=24%  Similarity=0.450  Sum_probs=171.2

Q ss_pred             CCCCCcchHHhhcCHHHHHHHHhhhccCceeecccccccccCHHHHHhHHhhhccCCc----eeec----CCcccCChhH
Q psy16834        247 EKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQK----FECE----CGYVTCNKYR  318 (488)
Q Consensus       247 ~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~----~~C~----C~~~~~~~~~  318 (488)
                      .+.+|-+|.+...-++.|+-|.++|+|++||+|.|||+.|.++.+|+.||.+|....+    +.|.    |...|.+...
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            4679999999999999999999999999999999999999999999999999977654    4563    8888999999


Q ss_pred             HHHHHHhhcc-CC------------CcccCCCCCCccCChHHHHHHHHhhcC----------------C----Ccccccc
Q psy16834        319 LTEHVRRTHL-KD------------YKVLCPICGYGCFRNAELEEHFISAHS----------------A----DRFKCVF  365 (488)
Q Consensus       319 l~~H~~~~h~-~~------------~~~~C~~C~~~f~~~~~l~~H~~~~~~----------------~----~~~~C~~  365 (488)
                      |..|++ .|+ +.            ..-+|..|.++|.....+..++..+-+                +    .+..+..
T Consensus       684 lpQhIr-iH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~  762 (958)
T KOG1074|consen  684 LPQHIR-IHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENS  762 (958)
T ss_pred             ccceEE-eecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccc
Confidence            999865 443 21            124688999999888877777654411                1    1567888


Q ss_pred             ccccccChhHHHHHHh----------------------hhcCCCCCc-cCCccCCcCCCchHHH----hh--------hh
Q psy16834        366 CEKSFARNCNLKLHIR----------------------RYHDKSDNT-ECPLCGKSFPSRGRLN----EH--------LI  410 (488)
Q Consensus       366 C~k~F~~~~~l~~H~~----------------------~~H~~~~~~-~C~~C~k~F~~~~~L~----~H--------~~  410 (488)
                      |+..+.....+..+--                      ..++.+++. .+..++..-...-...    .-        ..
T Consensus       763 ~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~  842 (958)
T KOG1074|consen  763 CGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLA  842 (958)
T ss_pred             cccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccc
Confidence            8888888776665421                      113345555 5666665443322111    00        00


Q ss_pred             h----hc-----------c---------------CCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhh
Q psy16834        411 Q----VH-----------P---------------AQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRY  460 (488)
Q Consensus       411 ~----~h-----------~---------------~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~  460 (488)
                      .    ..           +               .....|.+||+.|.+.++|..||++|+|+|||.|.+|+++|.++.+
T Consensus       843 t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgn  922 (958)
T KOG1074|consen  843 TKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGN  922 (958)
T ss_pred             cccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhh
Confidence            0    00           0               0127899999999999999999999999999999999999999999


Q ss_pred             HhccccccccCcC
Q psy16834        461 VTLHMRTHTGNWP  473 (488)
Q Consensus       461 L~~H~~~H~~~~~  473 (488)
                      |+.||.+|.+..|
T Consensus       923 LKvHMgtH~w~q~  935 (958)
T KOG1074|consen  923 LKVHMGTHMWVQP  935 (958)
T ss_pred             hhhhhccccccCC
Confidence            9999999988755

>KOG2462|consensus

Probab=99.96  E-value=1.1e-30  Score=224.24  Aligned_cols=136  Identities=30%  Similarity=0.640  Sum_probs=109.5

Q ss_pred             CCCcccCCCCCCccCChHHHHHHHHhhcC---CCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHH
Q psy16834        329 KDYKVLCPICGYGCFRNAELEEHFISAHS---ADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRL  405 (488)
Q Consensus       329 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L  405 (488)
                      ....|.|+.||+.+.+...|.+|...|-.   .+.+.|++|||.|.+-..|+.|+|. |+  -+.+|.+|||.|....-|
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirT-H~--l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRT-HT--LPCECGICGKAFSRPWLL  203 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhc-cC--CCcccccccccccchHHh
Confidence            44567888888888888888888776654   4568888888888888888888863 54  678888888888888888


Q ss_pred             HhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccc
Q psy16834        406 NEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRT  467 (488)
Q Consensus       406 ~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~  467 (488)
                      +.|+|+|+||+||.|+.|+|+|+.+++|+.||++|.+.|+|+|+.|+|+|..++.|.+|...
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            88888888888888888888888888888888888888888888888888888888888653

>KOG2462|consensus

Probab=99.96  E-value=1.3e-29  Score=217.77  Aligned_cols=127  Identities=31%  Similarity=0.613  Sum_probs=117.8

Q ss_pred             CCCccccccccccccChhHHHHHHhhhcC---CCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHH
Q psy16834        357 SADRFKCVFCEKSFARNCNLKLHIRRYHD---KSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTL  433 (488)
Q Consensus       357 ~~~~~~C~~C~k~F~~~~~l~~H~~~~H~---~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L  433 (488)
                      ....|+|+.|||.+.+.++|.+|.+. |.   ..+.+.|++|||.|.+-..|..|+++|.  -+++|.+|||.|...+-|
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~-H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQT-HRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLL  203 (279)
T ss_pred             cCCceeccccccccccccccchhhcc-cccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHh
Confidence            35679999999999999999999874 53   3467899999999999999999999865  689999999999999999


Q ss_pred             HHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccCccccccC
Q psy16834        434 KKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATISSE  487 (488)
Q Consensus       434 ~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~k~f~~~  487 (488)
                      +-|+|+|||||||.|++|+|+|..+++|+.||+||.+.++ |+|+.|+|+|+.+
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~-~qC~~C~KsFsl~  256 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK-HQCPRCGKSFALK  256 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc-ccCcchhhHHHHH
Confidence            9999999999999999999999999999999999999987 9999999999864

>KOG1074|consensus

Probab=99.96  E-value=5.3e-30  Score=248.94  Aligned_cols=292  Identities=18%  Similarity=0.284  Sum_probs=178.1

Q ss_pred             ceecCccCccccChhhHHHHHHhccCCCceeCccccccccchhhHHhHhhhccCCCCceecccchhhhhcccCCCCCCcC
Q psy16834        123 LFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISK  202 (488)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~~~~~~~~  202 (488)
                      +.+|-+|-+...-.++|+.|.++|+|++||+|.+||+.|.++.+|+.||-+|....+.                      
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~----------------------  662 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA----------------------  662 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccc----------------------
Confidence            5789999999999999999999999999999999999999999999999998765542                      


Q ss_pred             CCCccccc---cccccccChhHHHHHHhhcCCCCchhhhHhhhhcccCCCCCcchHHhhcCHHHHHHHHhhhccC-----
Q psy16834        203 NENLRPCT---LCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTD-----  274 (488)
Q Consensus       203 ~~~~~~C~---~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~-----  274 (488)
                       ...+.|+   +|.+.|.....|..|++.|-........... ......-+|..|.+.|.....+..++..+-+.     
T Consensus       663 -R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~-e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~  740 (958)
T KOG1074|consen  663 -RVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQISNGGTAA-EGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPD  740 (958)
T ss_pred             -cccccCCchhhhcccccccccccceEEeecCCCCCCCcccc-cccchhcccchhhhcccccccchhhhhccCCcccCCc
Confidence             1357788   9999999999999999986643322211111 11122357999999998888888887766321     


Q ss_pred             -----------c----eeecccccccccCHHHHHhHHhhhccCCceeecCCcccCChhHHHHHHHhhccCCCcc-cCCCC
Q psy16834        275 -----------V----NYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKV-LCPIC  338 (488)
Q Consensus       275 -----------~----~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~C~~~~~~~~~l~~H~~~~h~~~~~~-~C~~C  338 (488)
                                 .    +..+..|+..+.....+..+-.++....   +  .....+...-..-.....+.+.+. .+.++
T Consensus       741 ~~~~~~t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa---~--~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~  815 (958)
T KOG1074|consen  741 EQMDERTETEELDVTPPPPENSCGRELEGEMAISVRGSTEEASA---N--LDEVGTVSAAGEAGEEDDTSEKPTQASSFP  815 (958)
T ss_pred             ccccccccccccccCCCccccccccccCcccccccccchhhhhc---C--hhhhcCccccchhhhhcccCCCCcccccCC
Confidence                       1    3456666666665555544432221000   0  000000000001112233444444 45555


Q ss_pred             CCccCChHHHH----HHHHhhcCCCcccccccccccc--Chh-HHHHHHhhhc--------CCC--CCccCCccCCcCCC
Q psy16834        339 GYGCFRNAELE----EHFISAHSADRFKCVFCEKSFA--RNC-NLKLHIRRYH--------DKS--DNTECPLCGKSFPS  401 (488)
Q Consensus       339 ~~~f~~~~~l~----~H~~~~~~~~~~~C~~C~k~F~--~~~-~l~~H~~~~H--------~~~--~~~~C~~C~k~F~~  401 (488)
                      +..-...-...    .-...--++.. .=..  ..+.  ... .+.. ...+-        ...  ....|.+||+.|..
T Consensus       816 ~~~~~~~v~~~pvl~~~~~~~l~eg~-~t~~--n~~t~~~~~~sv~q-s~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsS  891 (958)
T KOG1074|consen  816 GEILAPSVNMDPVLWNQETSMLNEGL-ATKT--NEITPEGPADSVIQ-SGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSS  891 (958)
T ss_pred             CcCCccccccCchhhccccccccccc-cccc--ccccCCCcchhhhh-hccccccCCCCCCCCcccchhhhccchhcccc
Confidence            54333222111    00000000000 0000  0000  000 0000 00000        011  12569999999999


Q ss_pred             chHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcC
Q psy16834        402 RGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFH  447 (488)
Q Consensus       402 ~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~  447 (488)
                      .+.|..|+++|.+++||.|.+|++.|..+.+|+.||.+|....|+.
T Consensus       892 SsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~s  937 (958)
T KOG1074|consen  892 SAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPS  937 (958)
T ss_pred             hHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCc
Confidence            9999999999999999999999999999999999999998776553

>KOG3608|consensus

Probab=99.95  E-value=1.1e-27  Score=210.47  Aligned_cols=247  Identities=23%  Similarity=0.454  Sum_probs=190.0

Q ss_pred             cccccccccChhHHHHHHhhcCCCCchhhhHhhhhcccCCCCCc--chHHhhcCHHHHHHHHhhhccCceeecccccccc
Q psy16834        209 CTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCP--YCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEF  286 (488)
Q Consensus       209 C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~~~~~~~~C~~C~~~f  286 (488)
                      .+.|+..|.+...|..|+..+ ..-.+.+.......++..+.|.  .|.+.|.++..|++|++.|.+++...|+.||..|
T Consensus       139 WedCe~~F~s~~ef~dHV~~H-~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F  217 (467)
T KOG3608|consen  139 WEDCEREFVSIVEFQDHVVKH-ALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELF  217 (467)
T ss_pred             hhhcCCcccCHHHHHHHHHHh-hhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHh
Confidence            378999999999999999874 3333333222222222334454  5888888888888888888888888888888888


Q ss_pred             cCHHHHHhHHhhhccCCceeecCCcccCChhHHHHHHHhhccCCCcccCCCCCCccCChHHHHHHHHhhcCCCccccccc
Q psy16834        287 LSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFC  366 (488)
Q Consensus       287 ~~~~~l~~H~~~H~~~~~~~C~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  366 (488)
                      .++..|..|++.-+                          -....+|.|..|.|.|++...|..|+..|-  .-|+|+.|
T Consensus       218 ~~~tkl~DH~rRqt--------------------------~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplC  269 (467)
T KOG3608|consen  218 RTKTKLFDHLRRQT--------------------------ELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLC  269 (467)
T ss_pred             ccccHHHHHHHhhh--------------------------hhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hccccccc
Confidence            88888888876432                          233447888888888888888888887553  35899999


Q ss_pred             cccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccc--cccccCChHHHHHHHHh-hcC-
Q psy16834        367 EKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHI--CNKIVVSEKTLKKHLLL-HTN-  442 (488)
Q Consensus       367 ~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~~-  442 (488)
                      +.+....+.|.+||+..|..++||+|+.|++.|.+.+.|.+|... |.+..|+|+.  |..+|.+...|++|++. |.| 
T Consensus       270 dmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~-HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~  348 (467)
T KOG3608|consen  270 DMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV-HSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGN  348 (467)
T ss_pred             ccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh-ccccceecCCCCCcHHHHHHHHHHHHHHHhccCC
Confidence            999999999999999889999999999999999999999999885 5577899988  99999999999999875 434 


Q ss_pred             -CCCcCCcchhhccCChhhHhcccccccc-Cc----CccccccCccccc
Q psy16834        443 -SEPFHCPECGKAFKFKRYVTLHMRTHTG-NW----PTFVCKICNATIS  485 (488)
Q Consensus       443 -~~~~~C~~C~~~F~~~~~L~~H~~~H~~-~~----~~~~C~~C~k~f~  485 (488)
                       +-+|.|-.|++.|++..+|.+|++.-++ ..    ++|.=.+|.-+|.
T Consensus       349 np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~m  397 (467)
T KOG3608|consen  349 NPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGFM  397 (467)
T ss_pred             CCCceeeecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccCcee
Confidence             4579999999999999999999866443 22    2455555555553

>KOG3608|consensus

Probab=99.93  E-value=6.6e-26  Score=199.43  Aligned_cols=233  Identities=27%  Similarity=0.552  Sum_probs=172.7

Q ss_pred             ccC--CCCCCccCChhhHHHHHhhhccCCCccccccchhhccchhHHHHHHHHhc-C-CceecC--ccCccccChhhHHH
Q psy16834         68 FLC--IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHY-A-KLFDCH--ICGKTVVTEKNYKK  141 (488)
Q Consensus        68 ~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~l~~h~~~~~~-~-~~~~C~--~C~~~f~~~~~l~~  141 (488)
                      |.|  +.|+..|.+...|..|+.. |..-..|.                +....+ + ..+.|.  .|.+.|.+++.|.+
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~-H~l~ceyd----------------~~~~~~D~~pv~~C~W~~Ct~~~~~k~~Lre  197 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVK-HALFCEYD----------------IQKTPEDERPVTMCNWAMCTKHMGNKYRLRE  197 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHH-hhhhhhhh----------------hhhCCCCCCceeeccchhhhhhhccHHHHHH
Confidence            566  4688888888888888863 32110110                011111 1 235564  59999999999999


Q ss_pred             HHHhccCCCceeCccccccccchhhHHhHhhhccCCCCceecccchhhhhcccCCCCCCcCCCCccccccccccccChhH
Q psy16834        142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERK  221 (488)
Q Consensus       142 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~  221 (488)
                      |++.|++++...|+.||..|.++..|-.|++.-+..                         +.++|.|..|.|.|+++..
T Consensus       198 H~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l-------------------------~~n~fqC~~C~KrFaTekl  252 (467)
T KOG3608|consen  198 HIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTEL-------------------------NTNSFQCAQCFKRFATEKL  252 (467)
T ss_pred             HHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhh-------------------------cCCchHHHHHHHHHhHHHH
Confidence            999999999999999999999999999999876543                         2357899999999999999


Q ss_pred             HHHHHhhcCCCCchhhhHhhhhcccCCCCCcchHHhhcCHHHHHHHHhhhc-cCceeecccccccccCHHHHHhHHhhhc
Q psy16834        222 LKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVH-TDVNYKCEICGEEFLSKTRYNRHVVTHE  300 (488)
Q Consensus       222 L~~H~~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~H~  300 (488)
                      |..|+..+-                .-|+||.|+......++|.+||+.-| .++||+|+.|++.|.+.+.|.+|+.+|+
T Consensus       253 L~~Hv~rHv----------------n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  253 LKSHVVRHV----------------NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHHHHhh----------------hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            999998753                34899999999999999999998755 5799999999999999999999999988


Q ss_pred             cCCceeec---CCcccCChhHHHHHHHhhccCCCcccCCCCCCccCChHHHHHHHHhhcCCCccccccccccccChhHHH
Q psy16834        301 EKQKFECE---CGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLK  377 (488)
Q Consensus       301 ~~~~~~C~---C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~  377 (488)
                       +..|.|+   |.+++.+...|..|.+..|.++.                          +-+|.|..|++.|++-.+|.
T Consensus       317 -~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~n--------------------------p~~Y~CH~Cdr~ft~G~~L~  369 (467)
T KOG3608|consen  317 -KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNN--------------------------PILYACHCCDRFFTSGKSLS  369 (467)
T ss_pred             -ccceecCCCCCcHHHHHHHHHHHHHHHhccCCC--------------------------CCceeeecchhhhccchhHH
Confidence             5566662   55555555555555444443321                          33566666777776666666


Q ss_pred             HHHhhhcC
Q psy16834        378 LHIRRYHD  385 (488)
Q Consensus       378 ~H~~~~H~  385 (488)
                      +|+++.|.
T Consensus       370 ~HL~kkH~  377 (467)
T KOG3608|consen  370 AHLMKKHG  377 (467)
T ss_pred             HHHHHhhc
Confidence            66665553

>KOG3623|consensus

Probab=99.89  E-value=8.6e-24  Score=202.39  Aligned_cols=121  Identities=22%  Similarity=0.468  Sum_probs=101.8

Q ss_pred             eeCccccccccchhhHHhHhhhccCCCCceecccchhhhhcccCCCCCCcCCCCccccccccccccChhHHHHHHhhcCC
Q psy16834        152 FECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHP  231 (488)
Q Consensus       152 ~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~  231 (488)
                      ..|+.|++.+....+|+.|++.-+...                         +..|.|.+|..+|++...|.+|+..+-+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekn-------------------------e~nfsC~lCsytFAyRtQLErhm~~hkp  265 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKN-------------------------EPNFSCMLCSYTFAYRTQLERHMQLHKP  265 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhC-------------------------CCCCcchhhhhhhhhHHHHHHHHHhhcC
Confidence            689999999999999999998655432                         3457899999999999999999998766


Q ss_pred             CCchhhhHhhhhcccCCCCCcchHHhhcCHHHHHHHHhhhccCceeecccccccccCHHHHHhHHhh
Q psy16834        232 TSVEADLIRREKYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVT  298 (488)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  298 (488)
                      ....+. ...+....++|+|+.|+|.|..+..|+.|+|+|.|++||.|+-|+|+|.....+..||..
T Consensus       266 g~dqa~-sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  266 GGDQAI-SLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             CCcccc-cccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            544321 112233457899999999999999999999999999999999999999999999999853

>KOG3623|consensus

Probab=99.87  E-value=2.6e-22  Score=192.36  Aligned_cols=119  Identities=27%  Similarity=0.550  Sum_probs=96.6

Q ss_pred             ccCccccCcCCChHHHHHHHHhhh--CCCCccCCCCCCccCChhhHHHHHhhhccCCCccccccchhhccchhHHHHHHH
Q psy16834         40 ILCPECGRGFFNEKELAAHKIEIH--GADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQ  117 (488)
Q Consensus        40 ~~C~~C~~~f~~~~~l~~H~~~~h--~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~l~~h~~~  117 (488)
                      ..|++|++.+.....|+.|+...|  .+..|.|..|..+|..+..|.+||..+-.+...               ..++..
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dq---------------a~sltq  275 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQ---------------AISLTQ  275 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcc---------------cccccc
Confidence            579999999999999999987777  345689999999999999999999754322210               011222


Q ss_pred             HhcCCceecCccCccccChhhHHHHHHhccCCCceeCccccccccchhhHHhHhhh
Q psy16834        118 VHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRT  173 (488)
Q Consensus       118 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~  173 (488)
                      ....+.|+|..|||.|..+-.|+.|+|+|+|+|||.|+.|+|+|....++..||-.
T Consensus       276 sa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  276 SALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            23346799999999999999999999999999999999999999999999999753

>KOG3576|consensus

Probab=99.68  E-value=9.5e-18  Score=136.88  Aligned_cols=110  Identities=31%  Similarity=0.529  Sum_probs=77.7

Q ss_pred             CCcccCCCCCCccCChHHHHHHHHhhcCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhh
Q psy16834        330 DYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHL  409 (488)
Q Consensus       330 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~  409 (488)
                      ...+.|.+|||+|.-...|.+|++-|...+++-|..|||.|...-+|++|+| .|+|.+||+|..|+|.|.++-+|..|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~r-thtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-THTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhc-cccCccccchhhhhHHHHhhccHHHHH
Confidence            3456788888888877788888777777777888888888888888888876 477888888888888888888888887


Q ss_pred             hhhccCC-----------cccccccccccCChHHHHHHHHhh
Q psy16834        410 IQVHPAQ-----------KHQCHICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       410 ~~~h~~~-----------~~~C~~C~k~f~~~~~L~~H~~~H  440 (488)
                      +.+|+..           .|.|+.||.+-.....+..|++.|
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~  235 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLH  235 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhc
Confidence            7777642           355555555555555555555444

>KOG3576|consensus

Probab=99.68  E-value=6.9e-18  Score=137.70  Aligned_cols=115  Identities=26%  Similarity=0.541  Sum_probs=104.5

Q ss_pred             CCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHH
Q psy16834        358 ADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHL  437 (488)
Q Consensus       358 ~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~  437 (488)
                      ...|.|.+|+|.|.....|.+|++ .|...+.+.|..|||.|...-+|.+|+++|++.+||+|..|+|+|+++-+|..|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            567999999999999999999997 7999999999999999999999999999999999999999999999999999998


Q ss_pred             H-hhc----------CCCCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        438 L-LHT----------NSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       438 ~-~H~----------~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      + +|.          .++-|.|+.||.+-.....+..|++.|+...|
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            5 453          24679999999999999999999999876544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.39  E-value=4.3e-13  Score=131.12  Aligned_cols=135  Identities=21%  Similarity=0.408  Sum_probs=96.8

Q ss_pred             cccCCCCCCccCChHHHHHHHHhhcCCCcccccc--ccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhh
Q psy16834        332 KVLCPICGYGCFRNAELEEHFISAHSADRFKCVF--CEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHL  409 (488)
Q Consensus       332 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~  409 (488)
                      ...|+.|..... ...|..|.. .-.-..-.|+.  ||..|. +..|..|          +.|+.||+.|. .+.|..|+
T Consensus       407 ~V~C~NC~~~i~-l~~l~lHe~-~C~r~~V~Cp~~~Cg~v~~-r~el~~H----------~~C~~Cgk~f~-~s~LekH~  472 (567)
T PLN03086        407 TVECRNCKHYIP-SRSIALHEA-YCSRHNVVCPHDGCGIVLR-VEEAKNH----------VHCEKCGQAFQ-QGEMEKHM  472 (567)
T ss_pred             eEECCCCCCccc-hhHHHHHHh-hCCCcceeCCcccccceee-ccccccC----------ccCCCCCCccc-hHHHHHHH
Confidence            356888876644 344556654 22233446774  888883 3344444          36888888885 67788888


Q ss_pred             hhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccC----------ChhhHhccccccccCcCcccccc
Q psy16834        410 IQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFK----------FKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       410 ~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~----------~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      ..+|  .|+.|+ ||+.+ .+..|..|+.+|.+++|+.|++|++.|.          ..+.|..|+.+. |.++ +.|..
T Consensus       473 ~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt-~~C~~  546 (567)
T PLN03086        473 KVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT-APCDS  546 (567)
T ss_pred             HhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcc-eEccc
Confidence            8865  788888 88654 6688888888888888888988888885          235788888885 7766 88888


Q ss_pred             Ccccccc
Q psy16834        480 CNATISS  486 (488)
Q Consensus       480 C~k~f~~  486 (488)
                      ||+.|..
T Consensus       547 Cgk~Vrl  553 (567)
T PLN03086        547 CGRSVML  553 (567)
T ss_pred             cCCeeee
Confidence            8888764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.26  E-value=4.1e-12  Score=124.35  Aligned_cols=118  Identities=25%  Similarity=0.639  Sum_probs=93.5

Q ss_pred             cccCCC--CCCccCChHHHHHHHHhhcCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhh
Q psy16834        332 KVLCPI--CGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHL  409 (488)
Q Consensus       332 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~  409 (488)
                      ...|+.  ||..| ....+..|         +.|+.|++.|. ...|..|++.+|   .++.|+ ||+.+ .+..|..|+
T Consensus       433 ~V~Cp~~~Cg~v~-~r~el~~H---------~~C~~Cgk~f~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~  496 (567)
T PLN03086        433 NVVCPHDGCGIVL-RVEEAKNH---------VHCEKCGQAFQ-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQ  496 (567)
T ss_pred             ceeCCccccccee-eccccccC---------ccCCCCCCccc-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhh
Confidence            346874  88887 34444444         58999999996 678999988654   789999 99755 678999999


Q ss_pred             hhhccCCcccccccccccCC----------hHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccc
Q psy16834        410 IQVHPAQKHQCHICNKIVVS----------EKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRT  467 (488)
Q Consensus       410 ~~~h~~~~~~C~~C~k~f~~----------~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~  467 (488)
                      ..+.+.+++.|++|++.|..          .+.|..|+.+. |.+++.|..||+.|..+ .|..|+..
T Consensus       497 ~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        497 ASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             hccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHH
Confidence            88889999999999999952          35899999885 89999999999887754 47777654

>PHA00733 hypothetical protein

Probab=99.24  E-value=3.8e-12  Score=101.46  Aligned_cols=56  Identities=23%  Similarity=0.421  Sum_probs=41.3

Q ss_pred             ccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcccccccc
Q psy16834        413 HPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       413 h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      ++.+||.|+.|++.|.+...|..|+++|  +.+|.|++|+++|.....|..|+...++
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            4566777777777777777777777766  3567888888888888888877776554

>PHA00733 hypothetical protein

Probab=99.17  E-value=3.2e-11  Score=96.20  Aligned_cols=82  Identities=17%  Similarity=0.278  Sum_probs=61.5

Q ss_pred             CCccccccccccccChhHHHHH--Hhh--hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHH
Q psy16834        358 ADRFKCVFCEKSFARNCNLKLH--IRR--YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTL  433 (488)
Q Consensus       358 ~~~~~C~~C~k~F~~~~~l~~H--~~~--~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L  433 (488)
                      .+++.|.+|++.|.....|..+  +++  .+.+++||.|+.||+.|.+.+.|..|++.+  +.+|.|++|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            4567788888777776666655  221  234578888999999999888888888763  4578999999999999999


Q ss_pred             HHHHHhhc
Q psy16834        434 KKHLLLHT  441 (488)
Q Consensus       434 ~~H~~~H~  441 (488)
                      .+|+....
T Consensus       116 ~~H~~~~h  123 (128)
T PHA00733        116 LDHVCKKH  123 (128)
T ss_pred             HHHHHHhc
Confidence            88886544

>PHA02768 hypothetical protein; Provisional

Probab=99.15  E-value=1.6e-11  Score=79.50  Aligned_cols=45  Identities=20%  Similarity=0.354  Sum_probs=39.1

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhc
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTL  463 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~  463 (488)
                      .|+|+.||+.|+..++|..||++|+  +||+|..|++.|.+.+.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            4789999999999999999999998  78999999999998887753

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.96  E-value=2.2e-10  Score=63.51  Aligned_cols=26  Identities=42%  Similarity=1.045  Sum_probs=19.3

Q ss_pred             HHHHHHHhhcCCCCcCCcchhhccCC
Q psy16834        432 TLKKHLLLHTNSEPFHCPECGKAFKF  457 (488)
Q Consensus       432 ~L~~H~~~H~~~~~~~C~~C~~~F~~  457 (488)
                      +|++||++|+|++||.|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            46777777777777777777777753

...

>KOG3993|consensus

Probab=98.89  E-value=5.7e-10  Score=102.07  Aligned_cols=52  Identities=27%  Similarity=0.509  Sum_probs=46.2

Q ss_pred             CCCCcchHHhhcCHHHHHHHH--hhhccCceeecccccccccCHHHHHhHHhhhcc
Q psy16834        248 KVQCPYCAKFLSRKEKLNRHI--RTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEE  301 (488)
Q Consensus       248 ~~~C~~C~~~f~~~~~L~~H~--~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  301 (488)
                      .|.|.+|...|.+.-.|.+|.  ++++  ..|+|+.|+|.|.-..+|..|.|.|..
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~--vEYrCPEC~KVFsCPANLASHRRWHKP  320 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVH--VEYRCPECDKVFSCPANLASHRRWHKP  320 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEE--eeecCCcccccccCchhhhhhhcccCC
Confidence            488999999999999999997  4444  459999999999999999999999964

>PHA02768 hypothetical protein; Provisional

Probab=98.88  E-value=6.4e-10  Score=72.11  Aligned_cols=42  Identities=19%  Similarity=0.546  Sum_probs=24.0

Q ss_pred             cccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHH
Q psy16834        361 FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRL  405 (488)
Q Consensus       361 ~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L  405 (488)
                      |.|+.||+.|.+.++|..|++. |+  ++++|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~-H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRK-HN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHh-cC--CcccCCcccceeccccee
Confidence            5566666666666666666553 43  455566666665555544

>KOG3993|consensus

Probab=98.85  E-value=9.2e-10  Score=100.75  Aligned_cols=195  Identities=18%  Similarity=0.239  Sum_probs=116.4

Q ss_pred             cccCccccCcCCChHHHHHHHHhhhCCCCccCCCCCCccCChhhHHHHHhhhccCCCccc---cccchhhccchhHHHHH
Q psy16834         39 SILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKE---CKICHKVLRTARLSEHM  115 (488)
Q Consensus        39 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~---C~~C~~~f~~~~l~~h~  115 (488)
                      .|.|..|...|.+.-.|.+|.-...-...|+|++|+|.|+-..+|..|.| +|.....-.   -+-=.+...+..+.+-.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRR-WHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRR-WHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhc-ccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            38899999999999999998532222345899999999999999999987 554321100   00000000000010000


Q ss_pred             H---HHhcCCceecCccCccccChhhHHHHHHhccCCC-----------------ceeCccccccccchhhHHhHhhhcc
Q psy16834        116 K---QVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDK-----------------PFECQFCRKAFKLKYYLTLHLRTHT  175 (488)
Q Consensus       116 ~---~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~-----------------~~~C~~C~~~F~~~~~L~~H~~~h~  175 (488)
                      .   ....+..|.|.+|+++|.....|+.|+.+|....                 .+-|+.+.-.+.....-..+...+.
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence            0   0022347889999999999999999877764311                 1234444444443333333333333


Q ss_pred             CCCCceecccchhhhhcccCCCC--CCcCCCCccccccccccccChhHHHHHHhhcCCCCc
Q psy16834        176 GVRPMFECDICHKVLKTKSKKSS--GISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSV  234 (488)
Q Consensus       176 ~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~  234 (488)
                      +......++.++..+.++.....  .+...+..|.|.+|.-+|.+...|.+|+...|+...
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse~  486 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSEL  486 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHHh
Confidence            33333446666644444332222  123345678999999999999999999999998543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.76  E-value=2.1e-09  Score=59.58  Aligned_cols=26  Identities=42%  Similarity=0.850  Sum_probs=24.1

Q ss_pred             hHhccccccccCcCccccccCcccccc
Q psy16834        460 YVTLHMRTHTGNWPTFVCKICNATISS  486 (488)
Q Consensus       460 ~L~~H~~~H~~~~~~~~C~~C~k~f~~  486 (488)
                      +|+.||++|+|++| |.|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~-~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP-YKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSS-EEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCC-CCCCCCcCeeCc
Confidence            58999999999998 999999999974

...

>PHA00616 hypothetical protein

Probab=98.65  E-value=1.1e-08  Score=62.92  Aligned_cols=34  Identities=24%  Similarity=0.319  Sum_probs=25.2

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      ||+|+.||+.|.+++.|..|++.|+|++||.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5677777777777777777777777777777764

>PHA00732 hypothetical protein

Probab=98.56  E-value=4.6e-08  Score=70.36  Aligned_cols=49  Identities=29%  Similarity=0.541  Sum_probs=36.0

Q ss_pred             cccccccccccCChHHHHHHHHh-hcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLL-HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      ||.|++||+.|.+..+|+.|++. |+   ++.|+.||++|.   .|..|+++..+-
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~~   50 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYDI   50 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCCc
Confidence            57788888888888888888774 55   357888888887   577888766543

>PHA00616 hypothetical protein

Probab=98.55  E-value=1.7e-08  Score=62.09  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=31.9

Q ss_pred             CcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      ||+|+.||+.|.++++|..|++.|+|+.| |.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~-~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK-LTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc-cceeE
Confidence            79999999999999999999999999987 88864

>PHA00732 hypothetical protein

Probab=98.42  E-value=1.4e-07  Score=67.80  Aligned_cols=46  Identities=43%  Similarity=0.806  Sum_probs=31.3

Q ss_pred             ccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhh
Q psy16834        360 RFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQ  411 (488)
Q Consensus       360 ~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~  411 (488)
                      ||.|+.||+.|.+.++|+.|++..|.   ++.|++||++|.   .|..|+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            46777777777777777777764454   346777777776   46666643

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.26  E-value=1.3e-06  Score=58.46  Aligned_cols=50  Identities=30%  Similarity=0.624  Sum_probs=25.5

Q ss_pred             cccccccccccChhHHHHHHhhhcCCC-CCccCCccCCcCCCchHHHhhhhhhc
Q psy16834        361 FKCVFCEKSFARNCNLKLHIRRYHDKS-DNTECPLCGKSFPSRGRLNEHLIQVH  413 (488)
Q Consensus       361 ~~C~~C~k~F~~~~~l~~H~~~~H~~~-~~~~C~~C~k~F~~~~~L~~H~~~~h  413 (488)
                      |.|++|++. -+...|..|+...|..+ +.+.||+|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            555556653 33455666655555443 3455666655433  25555554443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.16  E-value=3e-06  Score=56.60  Aligned_cols=51  Identities=25%  Similarity=0.548  Sum_probs=33.2

Q ss_pred             cccCCcccccccchhhHHHHHHhhcCCC-ccccCccccCcCCChHHHHHHHHhhh
Q psy16834         10 KFSCSLCSYSVTIKRNLIMHIKRKHTDE-FSILCPECGRGFFNEKELAAHKIEIH   63 (488)
Q Consensus        10 ~~~C~~C~~~f~~~~~L~~H~~~~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h   63 (488)
                      .|.|++|++ ..+...|..|+...|..+ +.+.|++|...+.  .+|..|+...|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            477777777 445667777777777654 3567777776544  36777765554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.03  E-value=2.9e-06  Score=45.64  Aligned_cols=23  Identities=39%  Similarity=0.730  Sum_probs=14.2

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H  440 (488)
                      |+|++|++.|.++..|+.|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.85  E-value=8.6e-06  Score=62.95  Aligned_cols=71  Identities=27%  Similarity=0.475  Sum_probs=14.9

Q ss_pred             cccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHh
Q psy16834        363 CVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLL  439 (488)
Q Consensus       363 C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~  439 (488)
                      |.+|+..|.+...|..||...|.-..+     ....+.....|..++.. ....++.|.+|++.|.+...|+.||+.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRK-KVKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc-----ccccccccccccccccc-ccCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            566666666666666666555543222     11122233333333322 112246666666666666666666664

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.81  E-value=1.5e-05  Score=42.79  Aligned_cols=23  Identities=52%  Similarity=1.078  Sum_probs=17.0

Q ss_pred             eecccccccccCHHHHHhHHhhh
Q psy16834        277 YKCEICGEEFLSKTRYNRHVVTH  299 (488)
Q Consensus       277 ~~C~~C~~~f~~~~~l~~H~~~H  299 (488)
                      |+|++|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.70  E-value=1.8e-05  Score=61.14  Aligned_cols=73  Identities=25%  Similarity=0.415  Sum_probs=21.8

Q ss_pred             cCCcccccccchhhHHHHHHhhcCCCccccCccccCcCCChHHHHHHHHhhhCCCCccCCCCCCccCChhhHHHHHhhh
Q psy16834         12 SCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRY   90 (488)
Q Consensus        12 ~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~   90 (488)
                      +|.+|+..|.+...|..||...|.-..+     ....+.....+..+... .....+.|..|++.|.+...|..|++..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRK-KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc-----ccccccccccccccccc-ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5999999999999999999888864433     22223344455554422 2233699999999999999999999864

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.60  E-value=1.9e-05  Score=70.19  Aligned_cols=52  Identities=29%  Similarity=0.626  Sum_probs=36.4

Q ss_pred             CCcccccc--cccccCChHHHHHHHH-hh------------------cCCCCcCCcchhhccCChhhHhcccc
Q psy16834        415 AQKHQCHI--CNKIVVSEKTLKKHLL-LH------------------TNSEPFHCPECGKAFKFKRYVTLHMR  466 (488)
Q Consensus       415 ~~~~~C~~--C~k~f~~~~~L~~H~~-~H------------------~~~~~~~C~~C~~~F~~~~~L~~H~~  466 (488)
                      ++||+|++  |.|+|.+...|+-||. .|                  ...|||+|++|+|+|+....|+-|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            35566655  5566666666666553 23                  13489999999999999999998865

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.57  E-value=5e-05  Score=41.15  Aligned_cols=23  Identities=39%  Similarity=0.743  Sum_probs=11.3

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H  440 (488)
                      |.|++|++.|.+...|+.|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            44555555555555555555543

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.56  E-value=5e-05  Score=41.17  Aligned_cols=22  Identities=41%  Similarity=0.930  Sum_probs=10.4

Q ss_pred             cccccccccccChhHHHHHHhh
Q psy16834        361 FKCVFCEKSFARNCNLKLHIRR  382 (488)
Q Consensus       361 ~~C~~C~k~F~~~~~l~~H~~~  382 (488)
                      |.|++|+++|.+...|+.|++.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            3455555555555555555544

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.48  E-value=6.2e-05  Score=42.18  Aligned_cols=23  Identities=30%  Similarity=0.551  Sum_probs=11.5

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H  440 (488)
                      |+|++|++.|.+..+|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            44555555555555555554444

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.44  E-value=7.6e-05  Score=41.79  Aligned_cols=25  Identities=44%  Similarity=0.752  Sum_probs=15.0

Q ss_pred             ceeCccccccccchhhHHhHhhhcc
Q psy16834        151 PFECQFCRKAFKLKYYLTLHLRTHT  175 (488)
Q Consensus       151 ~~~C~~C~~~F~~~~~L~~H~~~h~  175 (488)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666665553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.21  E-value=0.00012  Score=65.28  Aligned_cols=69  Identities=25%  Similarity=0.441  Sum_probs=43.2

Q ss_pred             CCCcccccc--ccccccChhHHHHHHhhhcCCCCCccC--CccCCcCCCchHHHhhhhhhccCCcccccccccccCChHH
Q psy16834        357 SADRFKCVF--CEKSFARNCNLKLHIRRYHDKSDNTEC--PLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKT  432 (488)
Q Consensus       357 ~~~~~~C~~--C~k~F~~~~~l~~H~~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~  432 (488)
                      +++||+|++  |+|+|+....|+.|+.--|...+..+=  ++=-..|            .-..+||.|++|+|.|.+-..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F------------~~~~KPYrCevC~KRYKNlNG  413 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF------------SAKDKPYRCEVCDKRYKNLNG  413 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc------------cccCCceeccccchhhccCcc
Confidence            358899988  999999999999997643422211111  1111111            234467777777777777777


Q ss_pred             HHHHH
Q psy16834        433 LKKHL  437 (488)
Q Consensus       433 L~~H~  437 (488)
                      |+-|.
T Consensus       414 LKYHr  418 (423)
T COG5189         414 LKYHR  418 (423)
T ss_pred             ceecc
Confidence            77773

>smart00355 ZnF_C2H2 zinc finger

Probab=97.09  E-value=0.00047  Score=37.96  Aligned_cols=24  Identities=33%  Similarity=0.609  Sum_probs=12.7

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      |+|+.|++.|.+...|..|+++|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            345555555555555555555443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.07  E-value=0.00024  Score=44.80  Aligned_cols=31  Identities=26%  Similarity=0.651  Sum_probs=15.8

Q ss_pred             CCcccccccccccCChHHHHHHHHhhcCCCC
Q psy16834        415 AQKHQCHICNKIVVSEKTLKKHLLLHTNSEP  445 (488)
Q Consensus       415 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  445 (488)
                      +.|..|++|+..+.+..+|++||.++.+.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3466666666666666666666666555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.99  E-value=0.00028  Score=58.58  Aligned_cols=39  Identities=23%  Similarity=0.672  Sum_probs=32.9

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChh
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKR  459 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~  459 (488)
                      +|.|. |++   ....+++|.++|+|+++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            68888 887   6777889999999999999999999887554

>smart00355 ZnF_C2H2 zinc finger

Probab=96.88  E-value=0.00038  Score=38.32  Aligned_cols=25  Identities=56%  Similarity=1.015  Sum_probs=22.7

Q ss_pred             cCCcchhhccCChhhHhcccccccc
Q psy16834        446 FHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       446 ~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      |.|+.|+++|...+.|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            6899999999999999999997753

>KOG2231|consensus

Probab=96.86  E-value=0.0025  Score=64.36  Aligned_cols=17  Identities=6%  Similarity=0.089  Sum_probs=9.5

Q ss_pred             CccccChhhHHHHHHhc
Q psy16834        130 GKTVVTEKNYKKHMQLH  146 (488)
Q Consensus       130 ~~~f~~~~~l~~H~~~H  146 (488)
                      +.-|.....|..|.+.+
T Consensus       219 neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  219 NEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             chhcccchHHHHHhhhc
Confidence            34455566666666543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.85  E-value=0.00079  Score=42.51  Aligned_cols=41  Identities=27%  Similarity=0.344  Sum_probs=22.1

Q ss_pred             HHHHHhhcCCCccccCccccCcCCChHHHHHHHHhhhCCCC
Q psy16834         27 IMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADP   67 (488)
Q Consensus        27 ~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   67 (488)
                      ..+.+.++..+.|-.|++|+..+.+..+|.+|+...|+.+|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            44544455566677788888887777778887777776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.77  E-value=0.00078  Score=36.80  Aligned_cols=23  Identities=43%  Similarity=0.761  Sum_probs=15.3

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H  440 (488)
                      |.|++|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45677777777777777776543

>KOG2785|consensus

Probab=96.59  E-value=0.0039  Score=57.76  Aligned_cols=54  Identities=22%  Similarity=0.384  Sum_probs=45.3

Q ss_pred             ccCCCCCcchHHhhcCHHHHHHHHhhhccC-----------------------ceeeccccc---ccccCHHHHHhHHhh
Q psy16834        245 EREKVQCPYCAKFLSRKEKLNRHIRTVHTD-----------------------VNYKCEICG---EEFLSKTRYNRHVVT  298 (488)
Q Consensus       245 ~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  298 (488)
                      +..|-.|-.|++.+.+...-..||..+|+-                       ..+.|-.|+   +.|.+....+.||..
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            344578999999999999999999999862                       237888888   999999999999964

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.37  E-value=0.0027  Score=34.64  Aligned_cols=23  Identities=26%  Similarity=0.765  Sum_probs=18.1

Q ss_pred             eecccccccccCHHHHHhHHhhh
Q psy16834        277 YKCEICGEEFLSKTRYNRHVVTH  299 (488)
Q Consensus       277 ~~C~~C~~~f~~~~~l~~H~~~H  299 (488)
                      |.|++|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56888888888888888887654

>KOG2231|consensus

Probab=96.29  E-value=0.0047  Score=62.40  Aligned_cols=103  Identities=24%  Similarity=0.525  Sum_probs=73.5

Q ss_pred             cCCCCCCccCChhhHHHHHhhhccCCCccccccc----------hhhccchhHHHHHHHHhc-CCc----eecCccCccc
Q psy16834         69 LCIPCNKPFSKIENYRLHQRRYHLNSVNKECKIC----------HKVLRTARLSEHMKQVHY-AKL----FDCHICGKTV  133 (488)
Q Consensus        69 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C----------~~~f~~~~l~~h~~~~~~-~~~----~~C~~C~~~f  133 (488)
                      .|..| -.|.+...|+.|++..|..   +.|.+|          .+.+..+.|..|+..-.. ++.    -.|..|...|
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~f  192 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERF  192 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhh
Confidence            35555 5556888999999877754   345555          344556678888775332 221    3699999999


Q ss_pred             cChhhHHHHHHhccCCCceeCccc------cccccchhhHHhHhhhccCCCCceecc
Q psy16834        134 VTEKNYKKHMQLHSDDKPFECQFC------RKAFKLKYYLTLHLRTHTGVRPMFECD  184 (488)
Q Consensus       134 ~~~~~l~~H~~~H~~~~~~~C~~C------~~~F~~~~~L~~H~~~h~~~~~~~~C~  184 (488)
                      .....|.+|++.++    |.|.+|      +.-|.....|..|.+.+|     |.|.
T Consensus       193 ld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H-----flCE  240 (669)
T KOG2231|consen  193 LDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH-----FLCE  240 (669)
T ss_pred             ccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC-----cccc
Confidence            99999999998764    567666      356788889999998876     6666

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.24  E-value=0.003  Score=34.04  Aligned_cols=23  Identities=52%  Similarity=1.024  Sum_probs=14.8

Q ss_pred             ccCCcccccccchhhHHHHHHhhc
Q psy16834         11 FSCSLCSYSVTIKRNLIMHIKRKH   34 (488)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~~h   34 (488)
                      |+|+.|++... ...|.+|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777777776 777777776555

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.07  E-value=0.0033  Score=35.00  Aligned_cols=22  Identities=32%  Similarity=0.714  Sum_probs=17.0

Q ss_pred             cCCcchhhccCChhhHhccccc
Q psy16834        446 FHCPECGKAFKFKRYVTLHMRT  467 (488)
Q Consensus       446 ~~C~~C~~~F~~~~~L~~H~~~  467 (488)
                      |-|++|++.|.....|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6677888888888888887765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.91  E-value=0.0054  Score=51.00  Aligned_cols=38  Identities=16%  Similarity=0.606  Sum_probs=29.5

Q ss_pred             ceecCccCccccChhhHHHHHHhccCCCceeCccccccccch
Q psy16834        123 LFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLK  164 (488)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~F~~~  164 (488)
                      +|.|. |+.   ...++.+|.++|.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            57887 876   667778888888888888888888877654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.87  E-value=0.0058  Score=32.89  Aligned_cols=21  Identities=29%  Similarity=0.515  Sum_probs=9.2

Q ss_pred             ccccccccccCChHHHHHHHHh
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLL  439 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~  439 (488)
                      |+|+.|+.... +..|.+|+++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHh
Confidence            34555554444 4455555444

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.85  E-value=0.0027  Score=35.37  Aligned_cols=22  Identities=36%  Similarity=0.674  Sum_probs=13.8

Q ss_pred             ccccccccccCChHHHHHHHHh
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLL  439 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~  439 (488)
                      |.|.+|++.|.+...|+.|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666666543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=95.71  E-value=0.0039  Score=66.74  Aligned_cols=105  Identities=25%  Similarity=0.483  Sum_probs=57.5

Q ss_pred             CccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHH
Q psy16834        359 DRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLL  438 (488)
Q Consensus       359 ~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~  438 (488)
                      +.|+|+.|+..|+....|..|||..|.....   .+|- .+.+.-.+.+=..-.-+.+||.|..|.-+++.+.+|.+||.
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~---~~c~-~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQS---AYCK-AGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccch---hHhH-hccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            5567777777777777777777664432221   1110 00000000000000012346777777777777777777764


Q ss_pred             --hhcC-----------------------------------------CCCcCCcchhhccCChhhHhccccc
Q psy16834        439 --LHTN-----------------------------------------SEPFHCPECGKAFKFKRYVTLHMRT  467 (488)
Q Consensus       439 --~H~~-----------------------------------------~~~~~C~~C~~~F~~~~~L~~H~~~  467 (488)
                        +|..                                         +-++.|.+|+..-+-..+|+.||..
T Consensus       540 S~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmts  611 (1406)
T KOG1146|consen  540 SDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTA  611 (1406)
T ss_pred             HHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhcccccccc
Confidence              2311                                         0147888888888888888888865

>KOG2482|consensus

Probab=95.70  E-value=0.02  Score=52.09  Aligned_cols=108  Identities=24%  Similarity=0.434  Sum_probs=64.5

Q ss_pred             ccccccccccccChhHHHHHHhhh-cCCCCC----cc------CCccCCcCCCc-hHHH-----hhhh--------hhcc
Q psy16834        360 RFKCVFCEKSFARNCNLKLHIRRY-HDKSDN----TE------CPLCGKSFPSR-GRLN-----EHLI--------QVHP  414 (488)
Q Consensus       360 ~~~C~~C~k~F~~~~~l~~H~~~~-H~~~~~----~~------C~~C~k~F~~~-~~L~-----~H~~--------~~h~  414 (488)
                      ++.|-+|.|.|+.+..|+.|||.. |....|    |-      =..=||+.... +.+.     .+.-        .-++
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            578999999999999999999743 322111    10      00012221111 1110     0000        0011


Q ss_pred             CCc--ccccccccccCChHHHHHHHHh-hcC--------------------------CCCcCCcchhhccCChhhHhccc
Q psy16834        415 AQK--HQCHICNKIVVSEKTLKKHLLL-HTN--------------------------SEPFHCPECGKAFKFKRYVTLHM  465 (488)
Q Consensus       415 ~~~--~~C~~C~k~f~~~~~L~~H~~~-H~~--------------------------~~~~~C~~C~~~F~~~~~L~~H~  465 (488)
                      +.+  .+|-.|....-+...|..||.+ |.=                          ...-.|-.|.-.|.....|..||
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            223  5899999888888899999875 520                          01345778889999999999999


Q ss_pred             cc
Q psy16834        466 RT  467 (488)
Q Consensus       466 ~~  467 (488)
                      .-
T Consensus       355 ~e  356 (423)
T KOG2482|consen  355 VE  356 (423)
T ss_pred             cc
Confidence            75

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.58  E-value=0.012  Score=53.48  Aligned_cols=135  Identities=28%  Similarity=0.468  Sum_probs=79.9

Q ss_pred             cccCCc--ccccccchhhHHHHHHhhcCCCccccCcccc---CcC------CChHHHHHHHHhhhCCCC----ccCCCCC
Q psy16834         10 KFSCSL--CSYSVTIKRNLIMHIKRKHTDEFSILCPECG---RGF------FNEKELAAHKIEIHGADP----FLCIPCN   74 (488)
Q Consensus        10 ~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~C~~C~---~~f------~~~~~l~~H~~~~h~~~~----~~C~~C~   74 (488)
                      .|.|+.  |.........|..|.+..|..   +.|.+|-   +.|      .++..|..|...-..+.-    -.|..|+
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcc
Confidence            366754  666666677888888766643   5566663   233      345566666422111111    2588888


Q ss_pred             CccCChhhHHHHHhhhccCCCccccccchhhccchhHHHHHHHHhcCCceecCccCccccChhhHHHHHHhccCCCceeC
Q psy16834         75 KPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFEC  154 (488)
Q Consensus        75 ~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C  154 (488)
                      +.|-+-..|.+|+|..|.     .|-+|+++-...                    ..-|.+..+|..|.+.-    -|.|
T Consensus       228 ~~FYdDDEL~~HcR~~HE-----~ChICD~v~p~~--------------------~QYFK~Y~~Le~HF~~~----hy~c  278 (493)
T COG5236         228 IYFYDDDELRRHCRLRHE-----ACHICDMVGPIR--------------------YQYFKSYEDLEAHFRNA----HYCC  278 (493)
T ss_pred             ceecChHHHHHHHHhhhh-----hhhhhhccCccc--------------------hhhhhCHHHHHHHhhcC----ceEE
Confidence            888888888888876552     355555543111                    12477777787776532    2555


Q ss_pred             cc--cc----ccccchhhHHhHhhhccC
Q psy16834        155 QF--CR----KAFKLKYYLTLHLRTHTG  176 (488)
Q Consensus       155 ~~--C~----~~F~~~~~L~~H~~~h~~  176 (488)
                      .+  |-    ..|.....|..|+..-++
T Consensus       279 t~qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         279 TFQTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             EEEEEecCcEEEeccHHHHHHHHHHHhh
Confidence            43  32    368888888888765443

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.51  E-value=0.036  Score=50.50  Aligned_cols=122  Identities=23%  Similarity=0.466  Sum_probs=73.8

Q ss_pred             eeCcc--ccccccchhhHHhHhhhccCCCCceecccchh---hhh------cccCCCCCCcCCC------Cccccccccc
Q psy16834        152 FECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECDICHK---VLK------TKSKKSSGISKNE------NLRPCTLCDK  214 (488)
Q Consensus       152 ~~C~~--C~~~F~~~~~L~~H~~~h~~~~~~~~C~~C~~---~f~------~~~~~~~~~~~~~------~~~~C~~C~~  214 (488)
                      |.|+.  |..+-.....|+.|.+..++.   +-|++|-.   .|.      +++.+..|...+.      .--.|..|..
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            55553  444444455666666655543   55666632   222      2222333322221      1125889999


Q ss_pred             cccChhHHHHHHhhcCCCCchhhhHhhhhcccCCCCCcchHH-------hhcCHHHHHHHHhhhccCceeeccc--cc--
Q psy16834        215 KLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAK-------FLSRKEKLNRHIRTVHTDVNYKCEI--CG--  283 (488)
Q Consensus       215 ~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~-------~f~~~~~L~~H~~~~~~~~~~~C~~--C~--  283 (488)
                      .|-+.++|..|++..|.                  .|-+|++       -|.+-.+|.+|.+.-|    |.|.+  |-  
T Consensus       229 ~FYdDDEL~~HcR~~HE------------------~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~  286 (493)
T COG5236         229 YFYDDDELRRHCRLRHE------------------ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVG  286 (493)
T ss_pred             eecChHHHHHHHHhhhh------------------hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecC
Confidence            99999999999988774                  3666654       5777888888876544    66643  32  


Q ss_pred             --ccccCHHHHHhHHhh
Q psy16834        284 --EEFLSKTRYNRHVVT  298 (488)
Q Consensus       284 --~~f~~~~~l~~H~~~  298 (488)
                        ..|.....|..|+..
T Consensus       287 k~~vf~~~~el~~h~~~  303 (493)
T COG5236         287 KCYVFPYHTELLEHLTR  303 (493)
T ss_pred             cEEEeccHHHHHHHHHH
Confidence              357788888888754

>KOG1146|consensus

Probab=95.32  E-value=0.007  Score=64.95  Aligned_cols=101  Identities=19%  Similarity=0.295  Sum_probs=58.8

Q ss_pred             CccccCcCCChHHHHHHHHhhh-CCCCccCCCCCCccCChhhHHHHHhhhccCCCccccccchhhccchhHHHHHHHHhc
Q psy16834         42 CPECGRGFFNEKELAAHKIEIH-GADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHY  120 (488)
Q Consensus        42 C~~C~~~f~~~~~l~~H~~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~l~~h~~~~~~  120 (488)
                      |.-|+..+.+...+..|+...+ -.+.++|+.|+..|.....|..|||..|.....   ..|...-....+.+-....-.
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~---~~c~~gq~~~~~arg~~~~~~  515 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS---AYCKAGQNHPRLARGEVYRCP  515 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch---hHhHhccccccccccccccCC
Confidence            3344445555555555543333 235688999999999999999999987765543   222111100011110011112


Q ss_pred             CCceecCccCccccChhhHHHHHHh
Q psy16834        121 AKLFDCHICGKTVVTEKNYKKHMQL  145 (488)
Q Consensus       121 ~~~~~C~~C~~~f~~~~~l~~H~~~  145 (488)
                      .++|.|..|+..+..+.+|.+||+.
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHH
Confidence            3567888888888888888888764

>KOG2482|consensus

Probab=95.23  E-value=0.021  Score=51.92  Aligned_cols=109  Identities=18%  Similarity=0.308  Sum_probs=66.1

Q ss_pred             ceecCccCccccChhhHHHHHHh--ccC----------------------------------------------------
Q psy16834        123 LFDCHICGKTVVTEKNYKKHMQL--HSD----------------------------------------------------  148 (488)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~--H~~----------------------------------------------------  148 (488)
                      .+.|-.|.+.|.++..|+.||+.  |..                                                    
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            48899999999999999999973  210                                                    


Q ss_pred             CCc--eeCccccccccchhhHHhHhhhccCCCCceecccchhhhhcccCCCCCCcCCCCccccccccccccChhHHHHHH
Q psy16834        149 DKP--FECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHI  226 (488)
Q Consensus       149 ~~~--~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  226 (488)
                      ..+  ..|-.|.....+...|..||++-+.-.-.-.-+.-+-.|..+-.+..-+......-.|-.|+-.|..+..|..||
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            011  578888888888888888887654321100000000000000000000111122346899999999999999999


Q ss_pred             hhcCC
Q psy16834        227 RKQHP  231 (488)
Q Consensus       227 ~~~h~  231 (488)
                      ...-+
T Consensus       355 ~e~k~  359 (423)
T KOG2482|consen  355 VEDKH  359 (423)
T ss_pred             ccccc
Confidence            76543

>KOG2785|consensus

Probab=95.08  E-value=0.082  Score=49.32  Aligned_cols=66  Identities=24%  Similarity=0.378  Sum_probs=49.2

Q ss_pred             CccccccccccccChhHHHHHHhhcCCCCchhh--------hHhhh-hcccCCCCCcchH---HhhcCHHHHHHHHhh
Q psy16834        205 NLRPCTLCDKKLASERKLKEHIRKQHPTSVEAD--------LIRRE-KYEREKVQCPYCA---KFLSRKEKLNRHIRT  270 (488)
Q Consensus       205 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~--------~~~~~-~~~~~~~~C~~C~---~~f~~~~~L~~H~~~  270 (488)
                      .|-.|-.|++.+.+...-..||...|.+-.+..        ++... ..-...+.|-.|+   +.|.+....+.||..
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            356799999999999999999999998654321        11111 0123457788898   999999999999975

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.00  E-value=0.0088  Score=59.94  Aligned_cols=150  Identities=22%  Similarity=0.383  Sum_probs=92.7

Q ss_pred             cccCCCCCCccCChHHHHHHHH--hhcCC--Cccccc--cccccccChhHHHHHHhhhcCCCCCccCCc--cCCcCCCch
Q psy16834        332 KVLCPICGYGCFRNAELEEHFI--SAHSA--DRFKCV--FCEKSFARNCNLKLHIRRYHDKSDNTECPL--CGKSFPSRG  403 (488)
Q Consensus       332 ~~~C~~C~~~f~~~~~l~~H~~--~~~~~--~~~~C~--~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~--C~k~F~~~~  403 (488)
                      ++.|..|...|.....|..|..  .+.++  .++.|+  .|++.|.+...+..|.. .|.+..++.+..  +...+....
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHIL-LHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcc-cccCCCccccccccCcccccccc
Confidence            4566667777777777766666  45556  667776  57777777777777764 455555554433  222222222


Q ss_pred             H-----HHhhhhhhccCCcccccc--cccccCChHHHHHHHHhhcCCC--CcCCcchhhccCChhhHhccccccccCcCc
Q psy16834        404 R-----LNEHLIQVHPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSE--PFHCPECGKAFKFKRYVTLHMRTHTGNWPT  474 (488)
Q Consensus       404 ~-----L~~H~~~~h~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  474 (488)
                      .     .............+.+..  |...+.....+..|...|...+  .+.+..|++.|.....|..|++.|....+ 
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  446 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAP-  446 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCc-
Confidence            2     011111112223444433  6677777777778877777665  57778899999999999999999887765 


Q ss_pred             cccccCccc
Q psy16834        475 FVCKICNAT  483 (488)
Q Consensus       475 ~~C~~C~k~  483 (488)
                      +.|..++..
T Consensus       447 ~~~~~~~~~  455 (467)
T COG5048         447 LLCSILKSF  455 (467)
T ss_pred             eeecccccc
Confidence            555555443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.54  E-value=0.03  Score=30.37  Aligned_cols=18  Identities=33%  Similarity=0.724  Sum_probs=9.0

Q ss_pred             cccccccccCChHHHHHHH
Q psy16834        419 QCHICNKIVVSEKTLKKHL  437 (488)
Q Consensus       419 ~C~~C~k~f~~~~~L~~H~  437 (488)
                      +|++||+.| ....|.+|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            455555555 444455554

>KOG4173|consensus

Probab=94.11  E-value=0.031  Score=46.98  Aligned_cols=86  Identities=26%  Similarity=0.482  Sum_probs=64.2

Q ss_pred             CCcccCCc--ccccccchhhHHHHHHhhcCCCccccCccccCcCCChHHHHHHHHhhh----------CCCCccC--CCC
Q psy16834          8 TEKFSCSL--CSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH----------GADPFLC--IPC   73 (488)
Q Consensus         8 ~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h----------~~~~~~C--~~C   73 (488)
                      ...|.|.+  |...|........|....|+.    .|.+|.+.|.+...|..|+..-|          |.+.|.|  +.|
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            34577876  777888888888887666654    59999999999999999887655          4556788  568


Q ss_pred             CCccCChhhHHHHHhhhccCCCcc
Q psy16834         74 NKPFSKIENYRLHQRRYHLNSVNK   97 (488)
Q Consensus        74 ~~~f~~~~~l~~H~~~~h~~~~~~   97 (488)
                      +..|.+...-..|+-..|.-...|
T Consensus       153 t~KFkT~r~RkdH~I~~Hk~Pa~f  176 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMHKYPADF  176 (253)
T ss_pred             hhhhhhhhhhhhHHHHhccCCcce
Confidence            888888888888887666544333

>KOG4173|consensus

Probab=93.86  E-value=0.03  Score=47.05  Aligned_cols=44  Identities=27%  Similarity=0.578  Sum_probs=21.1

Q ss_pred             CCCccCChHHHHHHHHhhcCCCccccccccccccChhHHHHHHhhhc
Q psy16834        338 CGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYH  384 (488)
Q Consensus       338 C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H  384 (488)
                      |...|......+.|...-|+.   .|.+|.+.|.+...|..||..+|
T Consensus        87 c~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~H  130 (253)
T KOG4173|consen   87 CCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWH  130 (253)
T ss_pred             hHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHH
Confidence            334444444444443333332   45555555555555555554444

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.79  E-value=0.051  Score=29.48  Aligned_cols=19  Identities=32%  Similarity=0.796  Sum_probs=10.4

Q ss_pred             ecCccCccccChhhHHHHHH
Q psy16834        125 DCHICGKTVVTEKNYKKHMQ  144 (488)
Q Consensus       125 ~C~~C~~~f~~~~~l~~H~~  144 (488)
                      .|++||++| ..+.|.+|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455566555 4555555543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.18  E-value=0.067  Score=31.76  Aligned_cols=22  Identities=27%  Similarity=0.593  Sum_probs=13.7

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLL  438 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~  438 (488)
                      +|.|++|++.|.+..++..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4556666666666666666653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.92  E-value=0.069  Score=31.71  Aligned_cols=22  Identities=23%  Similarity=0.745  Sum_probs=13.2

Q ss_pred             ccccccccccccChhHHHHHHh
Q psy16834        360 RFKCVFCEKSFARNCNLKLHIR  381 (488)
Q Consensus       360 ~~~C~~C~k~F~~~~~l~~H~~  381 (488)
                      +|.|++|++.|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4556666666666666666653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.70  E-value=0.037  Score=55.44  Aligned_cols=57  Identities=28%  Similarity=0.603  Sum_probs=47.5

Q ss_pred             CceecCccCccccChhhHHHHHHhccCCCceeCcc--ccccccchhhHHhHhhhccCCC
Q psy16834        122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVR  178 (488)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~h~~~~  178 (488)
                      ..+.|+.|...|........|.+.+.+++++.|..  |...|.....+.+|.+.+....
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (467)
T COG5048          32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNP   90 (467)
T ss_pred             chhhcccccccccccchhhhhcccccccCCccccccccccccCCcchhhhhcccccccc
Confidence            46789999999999999999999999999999975  6777888888888888776543

>KOG2893|consensus

Probab=92.37  E-value=0.032  Score=47.98  Aligned_cols=47  Identities=28%  Similarity=0.647  Sum_probs=40.4

Q ss_pred             CCcchHHhhcCHHHHHHHHhhhccCceeecccccccccCHHHHHhH-Hhhhc
Q psy16834        250 QCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRH-VVTHE  300 (488)
Q Consensus       250 ~C~~C~~~f~~~~~L~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~H~  300 (488)
                      -|.+|++.|.....|.+|.+..|    |+|.+|-+...+--.|..| |++|.
T Consensus        12 wcwycnrefddekiliqhqkakh----fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCceeehhhhhh
Confidence            49999999999999999988655    9999999998888888888 45553

>KOG2893|consensus

Probab=91.59  E-value=0.049  Score=46.93  Aligned_cols=45  Identities=31%  Similarity=0.648  Sum_probs=26.3

Q ss_pred             CCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHH-HHhh
Q psy16834        392 CPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKH-LLLH  440 (488)
Q Consensus       392 C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H-~~~H  440 (488)
                      |-+|++.|.....|.+|++.    +-|+|.+|.|...+--.|..| |.+|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhh
Confidence            56666666666666665443    346666666666565555555 4444

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.57  E-value=0.44  Score=36.62  Aligned_cols=46  Identities=13%  Similarity=0.226  Sum_probs=28.5

Q ss_pred             cccchhhhhcccCCCCCCcCCCCccccccccccccChhHHHHHHhh
Q psy16834        183 CDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRK  228 (488)
Q Consensus       183 C~~C~~~f~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  228 (488)
                      |--|...|........+.......|.|+.|...|-..-++..|...
T Consensus        58 C~~C~~~f~~~~~~~~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~L  103 (112)
T TIGR00622        58 CFGCQGPFPKPPVSPFDELKDSHRYVCAVCKNVFCVDCDVFVHESL  103 (112)
T ss_pred             ccCcCCCCCCcccccccccccccceeCCCCCCccccccchhhhhhc
Confidence            6666666655432222223334568888888888877777777544

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=91.53  E-value=0.087  Score=30.83  Aligned_cols=10  Identities=50%  Similarity=1.467  Sum_probs=4.6

Q ss_pred             CCcCCcchhh
Q psy16834        444 EPFHCPECGK  453 (488)
Q Consensus       444 ~~~~C~~C~~  453 (488)
                      .|+.||+||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            3444555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.68  E-value=0.23  Score=29.02  Aligned_cols=24  Identities=29%  Similarity=0.850  Sum_probs=14.3

Q ss_pred             eecCccCccccChhhHHHHHHhccCCCceeCccccc
Q psy16834        124 FDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRK  159 (488)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~  159 (488)
                      |.|.+||..+....            .++.|++|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            56667766654332            5566777764

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00622 ssl1 transcription factor ssl1

Probab=88.21  E-value=0.45  Score=36.57  Aligned_cols=22  Identities=14%  Similarity=0.289  Sum_probs=15.7

Q ss_pred             CCccccccccccccChhHHHHH
Q psy16834        358 ADRFKCVFCEKSFARNCNLKLH  379 (488)
Q Consensus       358 ~~~~~C~~C~k~F~~~~~l~~H  379 (488)
                      +-|-.|++||-+......|.+-
T Consensus        13 ~LP~~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARS   34 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHh
Confidence            3467788888777777777764

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.40  E-value=0.31  Score=28.73  Aligned_cols=10  Identities=40%  Similarity=1.128  Sum_probs=5.9

Q ss_pred             cCCcchhhcc
Q psy16834        446 FHCPECGKAF  455 (488)
Q Consensus       446 ~~C~~C~~~F  455 (488)
                      |.|.+||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            5666666543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=85.12  E-value=0.46  Score=28.78  Aligned_cols=34  Identities=21%  Similarity=0.443  Sum_probs=19.4

Q ss_pred             cCCcchhhccCChhhHhccccccccCcCccccccCccccc
Q psy16834        446 FHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATIS  485 (488)
Q Consensus       446 ~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~k~f~  485 (488)
                      +.|+.|+..|.-..+...      ++.....|+.||..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~~------~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQLG------ANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHcC------CCCCEEECCCCCCEEE
Confidence            467777777765554432      1111367777777664

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG2186|consensus

Probab=84.92  E-value=0.41  Score=42.06  Aligned_cols=46  Identities=28%  Similarity=0.691  Sum_probs=25.8

Q ss_pred             ccCCCCCCccCChHHHHHHHHhhcCCCccccccccccccChhHHHHHHh
Q psy16834        333 VLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIR  381 (488)
Q Consensus       333 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~  381 (488)
                      |.|.+||....- ..+..|+..-++ .-|.|-.|+++|.. .++..|..
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            456666665433 334446655555 45666666666665 55556654

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.92  E-value=0.55  Score=30.40  Aligned_cols=28  Identities=32%  Similarity=0.561  Sum_probs=14.8

Q ss_pred             CCccccCccccCcCCChHHHHHHHHhhh
Q psy16834         36 DEFSILCPECGRGFFNEKELAAHKIEIH   63 (488)
Q Consensus        36 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h   63 (488)
                      +|.-+.|+-||..|....++.+|....|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4444555555555555555555554444

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=83.52  E-value=0.58  Score=30.30  Aligned_cols=28  Identities=25%  Similarity=0.560  Sum_probs=13.8

Q ss_pred             CCCCccCCCCCCccCChhhHHHHHhhhc
Q psy16834         64 GADPFLCIPCNKPFSKIENYRLHQRRYH   91 (488)
Q Consensus        64 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h   91 (488)
                      |+.-+.|+-|++.|....++.+|+...|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4444455555555555555555544333

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.36  E-value=0.35  Score=42.80  Aligned_cols=19  Identities=21%  Similarity=0.412  Sum_probs=10.1

Q ss_pred             ccccccccccccChhHHHH
Q psy16834        360 RFKCVFCEKSFARNCNLKL  378 (488)
Q Consensus       360 ~~~C~~C~k~F~~~~~l~~  378 (488)
                      .+.|++|++.|.++.-+..
T Consensus         5 ~~~CPvC~~~F~~~~vrs~   23 (214)
T PF09986_consen    5 KITCPVCGKEFKTKKVRSG   23 (214)
T ss_pred             ceECCCCCCeeeeeEEEcC
Confidence            4556666666665543333

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=81.11  E-value=1.1  Score=34.66  Aligned_cols=30  Identities=33%  Similarity=0.916  Sum_probs=17.7

Q ss_pred             ccCccccCcCCChHHHHHHHHhhhCCCCccCCCCCCccCCh
Q psy16834         40 ILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKI   80 (488)
Q Consensus        40 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~   80 (488)
                      ..|+.||.+|...           +..|..|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            3567777766531           23566677777666543

The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	488
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-21
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-18
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		5e-16
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-13
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		5e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		4e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		9e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		8e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-07
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		6e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		8e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-04
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-04
2ytq_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-04
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		4e-04
2ytf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		7e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 11  FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
           ++C  C  S +   +L  H +R HT E    CPECG+ F ++K+L  H+    G  P+ C
Sbjct: 22  YACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKC 80
Query: 71  IPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVL-RTARLSEHMKQVHYAKLFDCHIC 129
             C K FS+  N R HQ R H       C  C K   + A L  H +     K + C  C
Sbjct: 81  PECGKSFSQRANLRAHQ-RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPEC 139
Query: 130 GKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVR 178
           GK+   E N   H + H+ +KP++C  C K+F  +  L +H RTHTG +
Sbjct: 140 GKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 251 CPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFEC-EC 309
           CP C K  SR + L  H RT   +  YKC  CG+ F  K    RH  TH  ++ ++C EC
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC 83
Query: 310 GYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKS 369
           G     +  L  H +RTH  +    CP CG    + A L  H  +      +KC  C KS
Sbjct: 84  GKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKS 142
Query: 370 FARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEH 408
           F+R  NL  H +R H      +CP CGKSF  R  LN H
Sbjct: 143 FSREDNLHTH-QRTHTGEKPYKCPECGKSFSRRDALNVH 180

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 285 EFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFR 344
           EF S +   +  +   EK     ECG        L EH +RTH  +    CP CG     
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSD 61
Query: 345 NAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGR 404
             +L  H  +      +KC  C KSF++  NL+ H +R H       CP CGKSF     
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAH 120
Query: 405 LNEHLIQVHPAQKHQCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLH 464
           L  H       + ++C  C K    E             +P+ CPECGK+F  +  + +H
Sbjct: 121 LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180
Query: 465 MRTHTG 470
            RTHTG
Sbjct: 181 QRTHTG 186

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 334 LCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECP 393
            CP CG    R+  L EH  +      +KC  C KSF+   +L  H +R H      +CP
Sbjct: 23  ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHTGEKPYKCP 81
Query: 394 LCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEXXXXXXXXXXXNSEPFHCPECGK 453
            CGKSF  R  L  H       + + C  C K                  +P+ CPECGK
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 454 AFKFKRYVTLHMRTHTGNWPTFVCKICNATIS 485
           +F  +  +  H RTHTG  P + C  C  + S
Sbjct: 142 SFSREDNLHTHQRTHTGEKP-YKCPECGKSFS 172

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
           KL+ C  CGK+   +    +HM +H   +P+ C  C K FK+K++L  H++ HTG++P +
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-Y 66
Query: 182 ECDICHK 188
           EC+IC K
Sbjct: 67  ECNICAK 73

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 98  ECKICHKVL-RTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQF 156
           +C++C K   R  +L  HM+     K + C  C        +  KH+++HSD++PF+CQ 
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 157 CRKAFKLKYYLTLHLRTHTG 176
           C  A +    LT+HLR+HTG
Sbjct: 70  CPYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 250 QCPYCAKFLSRKEKLNRHIRTVHTDVN-YKCEICGEEFLSKTRYNRHVVTHEEKQKFECE 308
           +C  C K  SRK+KL  H+R  HT V  YKC+ C       +  N+H+  H +++ F+C+
Sbjct: 10  KCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 309 -CGYVTCNKYRLTEHVRRTHLKD 330
            C Y + N  +LT H+ R+H  D
Sbjct: 69  ICPYASRNSSQLTVHL-RSHTGD 90

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           C +      N  +H+++H+  KPF+C+ C + F    +LT H+RTHTG +P F CDIC +
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 52/129 (40%), Gaps = 27/129 (20%)
Query: 100 KICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQF--C 157
           K C K+ R           H  ++  C  CGK  V     K+H  +H+ +KPF+C F  C
Sbjct: 11  KGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC 70
Query: 158 RKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLXXXXXXXXXXXXNENLRPCTLCDKKLA 217
            K F L + L  H+R HTG RP     +C                     P   C+KK A
Sbjct: 71  GKRFSLDFNLRTHVRIHTGDRPY----VC---------------------PFDGCNKKFA 105
Query: 218 SERKLKEHI 226
               LK HI
Sbjct: 106 QSTNLKSHI 114

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 34/152 (22%)
Query: 245 EREKVQCPY--CAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEK 302
           E   + CP+  C K       + +H+ T H    + C  CG+ F+  ++  RH + H  +
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHT-HGPRVHVCAECGKAFVESSKLKRHQLVHTGE 60
Query: 303 QKFECE---CGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSAD 359
           + F+C    CG      + L  HV R H  D   +CP  G                    
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDG-------------------- 99
Query: 360 RFKCVFCEKSFARNCNLKLHIRRYHDKSDNTE 391
                 C K FA++ NLK HI   H K+ N +
Sbjct: 100 ------CNKKFAQSTNLKSHI-LTHAKAKNNQ 124

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 98  ECKICHKVL-RTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQF 156
           +CKIC K   R++ LS H+      + + C  CGK    + + KKH  +H+ +KP +CQ 
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 157 CRKAFKLKYYLTLHLRTHTG 176
           C KAF     L  H R HTG
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 33/80 (41%)
Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEXXXXXXXXXXXNSEPFHCPE 450
           +C +CGKSF     L+ HL+     + + C  C K    +             +P  C  
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 451 CGKAFKFKRYVTLHMRTHTG 470
           CGKAF     +  H R HTG
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           C +      +  +H+++H+  KPF+C+ C + F    +LT H+RTHTG +P F CDIC +
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           C +      +  +H+++H+  KPF+C+ C + F    +LT H+RTHTG +P F CDIC +
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 11 FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
          + C  C  S +   NL  H +R HT E    CPECG+ F    +L  H+    G  P+ C
Sbjct: 5  YKCPECGKSFSQSSNLQKH-QRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 71 IPCNKPFSKIENYRLHQR 88
            C K FS+ ++   HQR
Sbjct: 64 PECGKSFSRSDHLSRHQR 81

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
           K + C  CGK+     N +KH + H+ +KP++C  C K+F     L  H RTHTG +P +
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKP-Y 61
Query: 182 ECDICHKVL 190
           +C  C K  
Sbjct: 62  KCPECGKSF 70

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 29/108 (26%)
Query: 361 FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQC 420
           +KC  C KSF+++ NL+ H +R H      +CP CGKSF     L +H  + H  +K   
Sbjct: 5   YKCPECGKSFSQSSNLQKH-QRTHTGEKPYKCPECGKSFSQSSDLQKHQ-RTHTGEK--- 59
Query: 421 HICNKIVVSEXXXXXXXXXXXNSEPFHCPECGKAFKFKRYVTLHMRTH 468
                                   P+ CPECGK+F    +++ H RTH
Sbjct: 60  ------------------------PYKCPECGKSFSRSDHLSRHQRTH 83

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
           C +    + N   H+++H+  KPF+C+ C + F  +  L  H+RTHTG +P F CDIC
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKP-FACDIC 68

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           C +         +H+++H+  KPF+C+ C + F    +LT H+RTHTG +P F CDIC +
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
           C +         +H+++H+  KPF+C+ C + F    +LT H+RTHTG +P F CDIC
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDIC 68

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           C +         +H+++H+  KPF+C+ C + F    +LT H+RTHTG +P F CDIC +
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 69

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           C +         +H+++H+  KPF+C+ C + F    +LT H+RTHTG +P F CDIC +
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
           C +    + N   H+++H+  KPF+C+ C + F     L  H+RTHTG +P F CDIC
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKP-FACDIC 68

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 444 EPFHCPECGKAFKFKRYVTLHMRTHTGNWPT 474
           +P+ C ECGKAF+ K Y+ +HMRTHTG  P+
Sbjct: 9   KPYGCSECGKAFRSKSYLIIHMRTHTGEKPS 39

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
           + + C  CGK+     +  KH + H+ +KP++C  C KAF  + +L  H R HTG  P
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 150 KPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           KPF+C+ C + F    +LT H+RTHTG +P F CDIC +
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 39

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 26/143 (18%)
Query: 35  TDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNS 94
           +    + CP C + F ++  L  H  +  G  PF C  C K + + EN   H+ R   N 
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEAR---NC 59
Query: 95  VNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFEC 154
           +N+                        ++F C +C +T       + HM  H+ + P++C
Sbjct: 60  MNRS----------------------EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKC 97
Query: 155 QFCRKAFKLKYYLTLHL-RTHTG 176
             C + F  K  L  H+ + H+G
Sbjct: 98  SSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 93  NSVNKECKICHK-VLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQ---LHSD 148
            S   EC  CHK  L    L  H ++    K F+C  CGK    ++N  +H     ++  
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 149 DKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
           ++ F C  C++ F+ +  L LH+ +HTG  P ++C  C
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSHTGEMP-YKCSSC 100

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 42/153 (27%)
Query: 147 SDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLXXXXXXXXXXXXNENL 206
           S     EC  C K F  KYYL +H R HTG +P FEC  C K                  
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKP-FECPKCGKC----------------- 44
Query: 207 RPCTLCDKKLASERKLKEHIRKQHPTSVEAD--LIRREKYEREKVQCPYCAKFLSRKEKL 264
                             + RK++    EA   + R E+       C  C +   R+ +L
Sbjct: 45  ------------------YFRKENLLEHEARNCMNRSEQV----FTCSVCQETFRRRMEL 82
Query: 265 NRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVV 297
             H+ +   ++ YKC  C ++F+ K     H++
Sbjct: 83  RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
           CGKT     + K H++ H+ +KP+ C +  C   F     LT H R HTG RP F+C  C
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-FQCQKC 72
Query: 187 HKVL 190
            +  
Sbjct: 73  DRAF 76

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
           CGKT     + K H++ H+ +KP+ C +  C   F     LT H R HTG RP F+C  C
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-FQCQKC 71
Query: 187 HKVL 190
            +  
Sbjct: 72  DRAF 75

>pdb|2YTQ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 775- 807) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 444 EPFHCPECGKAFKFKRYVTLHMRTHTGNWPT 474
           +P+ C ECGKAF  K Y+ +HMRTH+G  P+
Sbjct: 11  KPYGCSECGKAFSSKSYLIIHMRTHSGEKPS 41

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 67  PFLCI--PCNKPFSKIENYRLHQRRYHLNSVNKEC--KICHKVL-RTARLSEHMKQVHYA 121
           PF+C    CNK + K+ + ++H R+ H      +C  K C +   R+ +L  H ++    
Sbjct: 6   PFMCAYPGCNKRYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTH 174
           K F C  C +      + K H + H+ +KPF C++  C+K F     L  H   H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 116 KQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRT 173
           +++HY    D   C K      + K H++ H+ +KP++C +  C   F     LT H R 
Sbjct: 13  RRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69
Query: 174 HTGVRPMFECDICHKVL 190
           HTG +P F+C +C++  
Sbjct: 70  HTGAKP-FQCGVCNRSF 85

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 153 ECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
           EC +C K F+  YYL +HLRTHTG +P ++C+ C
Sbjct: 6   ECSYCGKFFRSNYYLNIHLRTHTGEKP-YKCEFC 38

>pdb|2YTF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 607- 639) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 149 DKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
           +KPFEC  C+KAF  K  L +H RTHTG +P
Sbjct: 10  EKPFECSECQKAFNTKSNLIVHQRTHTGEKP 40

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
           K F C  CG+      N   H + H+D++P+ C  C KAF+ + +L  H   H+  +P F
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP-F 74
Query: 182 ECDICHK 188
           +C  C K
Sbjct: 75  KCQECGK 81

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	488
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-12
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	8e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	6e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 72.9 bits (180), Expect = 3e-15
 Identities = 63/181 (34%), Positives = 88/181 (48%), Gaps = 20/181 (11%)

Query: 9   EK-FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH-GAD 66
           EK ++C  C  S +   +L  H +R HT E    CPECG+ F ++K+L  H+   H G  
Sbjct: 19  EKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQR-THTGEK 76

Query: 67  PFLCIPCNKPFSKIENYRLHQRR------YHLNSVNKECKICHKVL-RTARLSEHMKQVH 119
           P+ C  C K FS+  N R HQR       Y        C  C K   + A L  H +  H
Sbjct: 77  PYKCPECGKSFSQRANLRAHQRTHTGEKPY-------ACPECGKSFSQLAHLRAHQR-TH 128

Query: 120 YA-KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVR 178
              K + C  CGK+   E N   H + H+ +KP++C  C K+F  +  L +H RTHTG +
Sbjct: 129 TGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

Query: 179 P 179
            
Sbjct: 189 T 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 71.7 bits (177), Expect = 8e-15
 Identities = 69/223 (30%), Positives = 90/223 (40%), Gaps = 51/223 (22%)

Query: 259 SRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFEC-ECGYVTCNK 316
                           +  Y C  CG+ F        H  TH  ++ ++C ECG    +K
Sbjct: 4   FGSSSSVAQAAL-EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 317 YRLTEHVRRTHL--KDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNC 374
             LT H +RTH   K YK  CP CG                            KSF++  
Sbjct: 63  KDLTRH-QRTHTGEKPYK--CPECG----------------------------KSFSQRA 91

Query: 375 NLKLHIRRYHDKSDNT-----ECPLCGKSFPSRGRLNEHLIQ-VHPAQK-HQCHICNKIV 427
           NL+ H +R H     T      CP CGKSF     L  H  Q  H  +K ++C  C K  
Sbjct: 92  NLRAH-QRTH-----TGEKPYACPECGKSFSQLAHLRAH--QRTHTGEKPYKCPECGKSF 143

Query: 428 VSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
             E  L  H   HT  +P+ CPECGK+F  +  + +H RTHTG
Sbjct: 144 SREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 69.8 bits (172), Expect = 4e-14
 Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 14/126 (11%)

Query: 361 FKCVFCEKSFARNCNLKLHIRRYHDKSDNT-----ECPLCGKSFPSRGRLNEHLIQVHPA 415
           + C  C KSF+R+ +L  H +R H     T     +CP CGKSF  +  L  H  + H  
Sbjct: 22  YACPECGKSFSRSDHLAEH-QRTH-----TGEKPYKCPECGKSFSDKKDLTRHQ-RTHTG 74

Query: 416 QK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPT 474
           +K ++C  C K       L+ H   HT  +P+ CPECGK+F    ++  H RTHTG  P 
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP- 133

Query: 475 FVCKIC 480
           + C  C
Sbjct: 134 YKCPEC 139

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 62.1 bits (152), Expect = 2e-11
 Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 47/209 (22%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
           K + C  CGK+     +  +H + H+ +KP++C  C K+F  K  LT H RTHTG +P +
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP-Y 78

Query: 182 ECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRR 241
           +C  C K    ++                           L+ H R  H           
Sbjct: 79  KCPECGKSFSQRA--------------------------NLRAHQRT-H---------TG 102

Query: 242 EK-YEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVN-YKCEICGEEFLSKTRYNRHVVTH 299
           EK Y      CP C K  S+   L  H RT HT    YKC  CG+ F  +   + H  TH
Sbjct: 103 EKPYA-----CPECGKSFSQLAHLRAHQRT-HTGEKPYKCPECGKSFSREDNLHTHQRTH 156

Query: 300 EEKQKFEC-ECGYVTCNKYRLTEHVRRTH 327
             ++ ++C ECG     +  L  H +RTH
Sbjct: 157 TGEKPYKCPECGKSFSRRDALNVH-QRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 48.2 bits (116), Expect = 8e-07
 Identities = 67/228 (29%), Positives = 88/228 (38%), Gaps = 53/228 (23%)

Query: 160 AFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASE 219
           +               G +P + C  C    K+ S+                        
Sbjct: 2   SEFGSSSSVAQAALEPGEKP-YACPECG---KSFSRSDH--------------------- 36

Query: 220 RKLKEHIRKQHPTSVEADLIRREK-YEREKVQCPYCAKFLSRKEKLNRHIRTVHT-DVNY 277
             L EH R  H T         EK Y+     CP C K  S K+ L RH RT HT +  Y
Sbjct: 37  --LAEHQRT-H-T--------GEKPYK-----CPECGKSFSDKKDLTRHQRT-HTGEKPY 78

Query: 278 KCEICGEEFLSKTRYNRHVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHL--KDYKVL 334
           KC  CG+ F  +     H  TH  ++ + C ECG        L  H +RTH   K YK  
Sbjct: 79  KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAH-QRTHTGEKPYK-- 135

Query: 335 CPICGYGCFRNAELEEHFISAHSADR-FKCVFCEKSFARNCNLKLHIR 381
           CP CG    R   L  H  + H+ ++ +KC  C KSF+R   L +H R
Sbjct: 136 CPECGKSFSREDNLHTHQRT-HTGEKPYKCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 432 TLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
           +      L    +P+ CPECGK+F    ++  H RTHTG  P + C  C
Sbjct: 8   SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKP-YKCPEC 55

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 68.3 bits (168), Expect = 3e-14
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 5/114 (4%)

Query: 361 FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEH--LIQVHPAQK- 417
            +C  C K F     LK+H  R H      ECP CGK +  +  L EH     ++ +++ 
Sbjct: 8   VECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHM-RTHTG 470
             C +C +       L+ H++ HT   P+ C  C + F  K+ +  HM + H+G
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.4 bits (150), Expect = 9e-12
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 28/145 (19%)

Query: 34  HTDEFSILCPECGRGFFNEKELAAHKIEIH-GADPFLCIPCNKPFSKIENYRLHQRRYHL 92
            +    + CP C + F ++  L  H    H G  PF C  C K + + EN   H+ R  +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 93  NSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPF 152
           N                  SE        ++F C +C +T       + HM  H+ + P+
Sbjct: 61  NR-----------------SE--------QVFTCSVCQETFRRRMELRLHMVSHTGEMPY 95

Query: 153 ECQFCRKAFKLKYYLTLH-LRTHTG 176
           +C  C + F  K  L  H ++ H+G
Sbjct: 96  KCSSCSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 98  ECKICHKV-LRTARLSEHMKQVHYA-KLFDCHICGKTVVTEKNYKKHM---QLHSDDKPF 152
           EC  CHK  L    L  H +  H   K F+C  CGK    ++N  +H     ++  ++ F
Sbjct: 9   ECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 153 ECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKS 194
            C  C++ F+ +  L LH+ +HTG  P ++C  C +    K 
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMP-YKCSSCSQQFMQKK 108

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 52.5 bits (127), Expect = 9e-09
 Identities = 41/154 (26%), Positives = 55/154 (35%), Gaps = 46/154 (29%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNEN 205
            S     EC  C K F  KYYL +H R HTG +P FEC  C K    K            
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKP-FECPKCGKCYFRKE----------- 49

Query: 206 LRPCTLCDKKLASERKLKEHIRKQ--HPTSVEADLIRREK-YEREKVQCPYCAKFLSRKE 262
                           L EH  +   +         R E+ +      C  C +   R+ 
Sbjct: 50  ---------------NLLEHEARNCMN---------RSEQVFT-----CSVCQETFRRRM 80

Query: 263 KLNRHIRTVHTDVN-YKCEICGEEFLSKTRYNRH 295
           +L  H+ + HT    YKC  C ++F+ K     H
Sbjct: 81  ELRLHMVS-HTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.7 bits (112), Expect = 9e-07
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
            + S    CP C K F  K Y+ +H R HTG  P F C  C
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKP-FECPKC 41

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)

Query: 277 YKCEICGEEFLSKTRYNRHVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYKVLC 335
            +C  C ++FLSK     H   H  ++ FEC +CG     K  L EH  R  +       
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM------- 60

Query: 336 PICGYGCFRNAELEEHFISAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPL 394
                               + +++ F C  C+++F R   L+LH    H      +C  
Sbjct: 61  --------------------NRSEQVFTCSVCQETFRRRMELRLH-MVSHTGEMPYKCSS 99

Query: 395 CGKSFPSRGRLNEHLIQVH 413
           C + F  +  L  H+I++H
Sbjct: 100 CSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 42.1 bits (100), Expect = 4e-05
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 250 QCPYCAKFLSRKEKLNRHIR--TVHTDVN-YKCEICGEEFLSKTRYNRHVVTHEEKQKFE 306
           +CP C K   RKE L  H     ++     + C +C E F  +     H+V+H  +  ++
Sbjct: 37  ECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYK 96

Query: 307 C-ECGYVTCNKYRLTEHVRRTH 327
           C  C      K  L  H+ + H
Sbjct: 97  CSSCSQQFMQKKDLQSHMIKLH 118

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 14/123 (11%)

Query: 361 FKCVFCEKSFARNCNLKLHIRRYH--------DKSDNTECPLCGKSFPSRGRLNEHLIQV 412
                C+++F+    L  H+   H              ECP  GKSF ++ +L  H I+V
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH-IRV 84

Query: 413 HPAQK-HQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHC--PECGKAFKFKRYVTLHMRT 467
           H  +K   C    C KI    + LK H   HT  +PF C    C + F        HM  
Sbjct: 85  HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

Query: 468 HTG 470
           HT 
Sbjct: 145 HTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 24/149 (16%)

Query: 44  ECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICH 103
             G      K+  + K             C++ FS +     H    H+    +   +C+
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 104 KVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAF 161
                                +C   GK+   +     H+++H+ +KPF C F  C K F
Sbjct: 62  W-------------------EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF 102

Query: 162 KLKYYLTLHLRTHTGVRPMFECDI--CHK 188
                L +H RTHTG +P F+C+   C +
Sbjct: 103 ARSENLKIHKRTHTGEKP-FKCEFEGCDR 130

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 38/171 (22%), Positives = 53/171 (30%), Gaps = 44/171 (25%)

Query: 28  MHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPF---------LCIPCNKPFS 78
           +  K     + S     C R F    EL  H    H   P           C    K F 
Sbjct: 14  LSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK 73

Query: 79  KIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYA-KLFDCHI--CGKTVVT 135
                     +Y L +                   H++ VH   K F C    CGK    
Sbjct: 74  ---------AKYKLVN-------------------HIR-VHTGEKPFPCPFPGCGKIFAR 104

Query: 136 EKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECD 184
            +N K H + H+ +KPF+C+F  C + F        H+  HT  +      
Sbjct: 105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS-GPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 36/189 (19%), Positives = 55/189 (29%), Gaps = 48/189 (25%)

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
            G +    K       +         + C + F   + L  H+       P     +C+ 
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 189 VLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIR-----KQHPTSVEADLIRREK 243
                               C    K   ++ KL  HIR     K  P            
Sbjct: 63  ------------------EECPREGKSFKAKYKLVNHIRVHTGEKPFP------------ 92

Query: 244 YEREKVQCPY--CAKFLSRKEKLNRHIRTVHT-DVNYKCEI--CGEEFLSKTRYNRHVVT 298
                  CP+  C K  +R E L  H RT HT +  +KCE   C   F + +   +H+  
Sbjct: 93  -------CPFPGCGKIFARSENLKIHKRT-HTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

Query: 299 HEEKQKFEC 307
           H   +    
Sbjct: 145 HTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 12/87 (13%)

Query: 396 GKSFPSRGRLNEHLI--QVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFH----- 447
           G S  S   + + L    +  AQ       C++   +   L  H+ +     P       
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 448 ----CPECGKAFKFKRYVTLHMRTHTG 470
               CP  GK+FK K  +  H+R HTG
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTG 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 61.4 bits (150), Expect = 8e-12
 Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 10/117 (8%)

Query: 361 FKCVF--CEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK- 417
             C    C K F  N  ++ H+  +  +     C  CGK+F    +L  H   VH  +K 
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRVH--VCAECGKAFVESSKLKRH-QLVHTGEKP 62

Query: 418 HQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHCP--ECGKAFKFKRYVTLHMRTHTG 470
            QC    C K    +  L+ H+ +HT   P+ CP   C K F     +  H+ TH  
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 33/143 (23%), Positives = 49/143 (34%), Gaps = 35/143 (24%)

Query: 42  CPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKI 101
              C + F +   +  H    HG    +C  C K F +    + HQ              
Sbjct: 10  HKGCTKMFRDNSAMRKHLH-THGPRVHVCAECGKAFVESSKLKRHQL------------- 55

Query: 102 CHKVLRTARLSEHMKQVHYA-KLFDCHI--CGKTVVTEKNYKKHMQLHSDDKPFECQF-- 156
                           VH   K F C    CGK    + N + H+++H+ D+P+ C F  
Sbjct: 56  ----------------VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 99

Query: 157 CRKAFKLKYYLTLHLRTHTGVRP 179
           C K F     L  H+ TH   + 
Sbjct: 100 CNKKFAQSTNLKSHILTHAKAKN 122

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 111 LSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLT 168
           + +H+   H  ++  C  CGK  V     K+H  +H+ +KPF+C F  C K F L + L 
Sbjct: 23  MRKHLH-THGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 81

Query: 169 LHLRTHTGVRPMFEC 183
            H+R HTG RP + C
Sbjct: 82  THVRIHTGDRP-YVC 95

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 125 DCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
               C K        +KH+  H   +   C  C KAF     L  H   HTG +P F+C
Sbjct: 9   PHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKP-FQC 65

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 59.7 bits (146), Expect = 1e-11
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP 449
           +C +CGK F  + +L  H ++ H   K ++C  C+       +L KHL +H++  PF C 
Sbjct: 10  KCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 450 ECGKAFKFKRYVTLHMRTHTG 470
            C  A +    +T+H+R+HTG
Sbjct: 69  ICPYASRNSSQLTVHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 56.3 bits (137), Expect = 3e-10
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 98  ECKICHKVL-RTARLSEHMKQVHYA-KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQ 155
           +C++C K   R  +L  HM+  H   K + C  C        +  KH+++HSD++PF+CQ
Sbjct: 10  KCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 156 FCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
            C  A +    LT+HLR+HTG       
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDSG-PSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 46.6 bits (112), Expect = 6e-07
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
                P +C+ C K F  K  L  H+R HTGV+P ++C  C  
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTCDY 44

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.3 bits (106), Expect = 4e-06
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
             +S P  C  CGK F  K  +  HMR HTG  P + CK C
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTC 42

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.8 bits (102), Expect = 1e-05
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 250 QCPYCAKFLSRKEKLNRHIRTVHTDVN-YKCEICGEEFLSKTRYNRHVVTHEEKQKFEC- 307
           +C  C K  SRK+KL  H+R  HT V  YKC+ C       +  N+H+  H +++ F+C 
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 308 ECGYVTCNKYRLTEHVRRTH 327
            C Y + N  +LT H  R+H
Sbjct: 69  ICPYASRNSSQLTVH-LRSH 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 58.2 bits (142), Expect = 4e-11
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 391 ECPL--CGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFH 447
            CP+  C + F   G L  H I++H  QK  QC IC +       L  H+  HT  +PF 
Sbjct: 6   ACPVESCDRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 448 CPECGKAFKFKRYVTLHMRTHTG 470
           C  CG+ F        H + H  
Sbjct: 65  CDICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           C +      +  +H+++H+  KPF+C+ C + F    +LT H+RTHTG +P F CDIC +
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGR 70

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 50.5 bits (122), Expect = 2e-08
 Identities = 15/55 (27%), Positives = 23/55 (41%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
           K F C IC +      +   H++ H+ +KPF C  C + F        H + H  
Sbjct: 33  KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 432 TLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
           +L +H+ +HT  +PF C  C + F    ++T H+RTHTG  P F C IC
Sbjct: 21  SLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDIC 68

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 58.6 bits (143), Expect = 6e-11
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
           KL+ C  CGK+   +    +HM +H   +P+ C  C K FK+K++L  H++ HTG++P +
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-Y 66

Query: 182 ECDICHKVLKTKS 194
           EC+IC K    + 
Sbjct: 67  ECNICAKRFMWRD 79

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 51.3 bits (124), Expect = 2e-08
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
           + + C +CGK    + +   HM++H+  KP+EC  C K F  +   + H    +  +  +
Sbjct: 36  RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRD--SFHRHVTSCTKS-Y 92

Query: 182 ECDICHKVLKTKSKKSSG 199
           E     +     S  SSG
Sbjct: 93  EAAKAEQNTTEASGPSSG 110

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 50.9 bits (123), Expect = 3e-08
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 395 CGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGK 453
           CGKSF  + + + H+  +H   + + C +C K    +  L  H+ +HT  +P+ C  C K
Sbjct: 15  CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAK 73

Query: 454 AFKFKRYVTLHMRTHTGNWPTFVCKIC 480
            F ++   + H    +     +     
Sbjct: 74  RFMWRD--SFHRHVTSCTKS-YEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 47.4 bits (114), Expect = 5e-07
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKS 194
            S DK + CQ C K+F  K     H+  H G+RP + C +C K  K K 
Sbjct: 5   SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKH 51

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.4 bits (140), Expect = 7e-11
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 124 FDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
           FDC ICGK+         H+ +HSD +P+ CQ+C K F  K  +  H   HTG +P  +C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP-HKC 60

Query: 184 DICHK 188
            +C K
Sbjct: 61  QVCGK 65

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 55.5 bits (135), Expect = 3e-10
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP 449
           +C +CGKSF     L+ HL+ +H   + + C  C K    +  +KKH  +HT  +P  C 
Sbjct: 3   DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 450 ECGKAFKFKRYVTLHMRTHTG 470
            CGKAF     +  H R HTG
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 49.7 bits (120), Expect = 3e-08
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 98  ECKICHKVL-RTARLSEHMKQVHYA-KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQ 155
           +CKIC K   R++ LS H+  +H   + + C  CGK    + + KKH  +H+ +KP +CQ
Sbjct: 3   DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 156 FCRKAFKLKYYLTLHLRTHTG 176
            C KAF     L  H R HTG
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 48.6 bits (117), Expect = 8e-08
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 419 QCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK 478
            C IC K      TL  HLL+H+++ P+ C  CGK F  K  +  H   HTG  P   C+
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP-HKCQ 61

Query: 479 IC 480
           +C
Sbjct: 62  VC 63

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.9 bits (92), Expect = 2e-04
 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 11 FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH-GADPFL 69
          F C +C  S      L  H    H+D     C  CG+ F  + ++  H   IH G  P  
Sbjct: 2  FDCKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHK 59

Query: 70 CIPCNKPFSKIENYRLHQR 88
          C  C K FS+  N   H R
Sbjct: 60 CQVCGKAFSQSSNLITHSR 78

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 9/115 (7%)

Query: 361 FKC--VFCEKSFARNCNLKLHIRRYH--DKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQ 416
           F C    C K + +  +L++H R+ H  +K    +   C + F    +L  H  + H   
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRH-QRRHTGV 64

Query: 417 K-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHC--PECGKAFKFKRYVTLHMRTH 468
           K  QC  C +       LK H   HT  +PF C  P C K F     +  H   H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 53.3 bits (129), Expect = 5e-09
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 393 PLCGKSFPSRGRLNEHLIQVHPAQK-HQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHCP 449
           P C K +     L  H  + H  +K +QC    C +       LK+H   HT  +PF C 
Sbjct: 12  PGCNKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK 70

Query: 450 ECGKAFKFKRYVTLHMRTHTG 470
            C + F    ++  H RTHTG
Sbjct: 71  TCQRKFSRSDHLKTHTRTHTG 91

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.4 bits (124), Expect = 2e-08
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDI--C 186
           C +        K+H + H+  KPF+C+ C++ F    +L  H RTHTG +P F C    C
Sbjct: 44  CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP-FSCRWPSC 102

Query: 187 HK 188
            K
Sbjct: 103 QK 104

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 47/156 (30%)

Query: 150 KPFEC--QFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLR 207
           +PF C    C K +    +L +H R HTG +P ++CD                       
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP-YQCDFKD-------------------- 43

Query: 208 PCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREK-YEREKVQCPYCAKFLSRKEKLNR 266
               C+++ +   +LK H R+ H T          K ++     C  C +  SR + L  
Sbjct: 44  ----CERRFSRSDQLKRHQRR-H-TG--------VKPFQ-----CKTCQRKFSRSDHLKT 84

Query: 267 HIRTVHTDVN-YKCEI--CGEEFLSKTRYNRHVVTH 299
           H RT HT    + C    C ++F       RH   H
Sbjct: 85  HTRT-HTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 57.1 bits (139), Expect = 2e-10
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP 449
            C  CG+ F     L  H    H  ++ + C IC+K    +  L+ H  +H+  +PF C 
Sbjct: 19  ICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77

Query: 450 ECGKAFKFKRYVTLHMRTHTG 470
           ECGK F   R + +H   H  
Sbjct: 78  ECGKGFCQSRTLAVHKTLHMQ 98

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 55.5 bits (135), Expect = 6e-10
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
           K F C  CG+      N   H + H+D++P+ C  C KAF+ + +L  H   H+  +P F
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP-F 74

Query: 182 ECDICHK 188
           +C  C K
Sbjct: 75  KCQECGK 81

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 55.1 bits (134), Expect = 7e-10
 Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 33/131 (25%)

Query: 55  LAAHKIEIH-GADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSE 113
            +  ++        F+C  C + F+K  N  +H+R                         
Sbjct: 5   SSGGRL-PSKTKKEFICKFCGRHFTKSYNLLIHER------------------------- 38

Query: 114 HMKQVHYA-KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLR 172
                H   + + C IC K    + + + H  +HS +KPF+CQ C K F     L +H  
Sbjct: 39  ----THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94

Query: 173 THTGVRPMFEC 183
            H         
Sbjct: 95  LHMQTSS-PTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 55.1 bits (134), Expect = 9e-10
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
                    K F C+FC + F   Y L +H RTHT  RP + CDICHK
Sbjct: 7   GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP-YTCDICHK 53

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 47.4 bits (114), Expect = 4e-07
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 432 TLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
                 L     + F C  CG+ F     + +H RTHT   P + C IC
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP-YTCDIC 51

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 40.1 bits (95), Expect = 1e-04
 Identities = 25/132 (18%), Positives = 37/132 (28%), Gaps = 33/132 (25%)

Query: 25  NLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH-GADPFLCIPCNKPFSKIENY 83
                 +     +   +C  CGR F     L  H+   H    P+ C  C+K F + ++ 
Sbjct: 4   GSSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHL 61

Query: 84  RLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYA-KLFDCHICGKTVVTEKNYKKH 142
           R H+                              +H   K F C  CGK     +    H
Sbjct: 62  RDHRY-----------------------------IHSKEKPFKCQECGKGFCQSRTLAVH 92

Query: 143 MQLHSDDKPFEC 154
             LH        
Sbjct: 93  KTLHMQTSSPTA 104

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 49/179 (27%), Positives = 62/179 (34%), Gaps = 38/179 (21%)

Query: 25  NLIMHIKRKHTDEFSILCPE--CGRGFFNEKELAAHKIEIH-GADPFLC--IPCNKPFSK 79
            L  H   KHT E    C E  C +GF +   L  H +  H G   F C    C+  F+ 
Sbjct: 29  KLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTT 86

Query: 80  IENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAKLFDCHI--CGKTVVTEK 137
             N + H  R+H                        K   Y     CH   CGK      
Sbjct: 87  KANMKKHFNRFHNI----------------------KICVY----VCHFENCGKAFKKHN 120

Query: 138 NYKKHMQLHSDDKPFEC--QFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKS 194
             K H   H+   P+EC  + C K F L   L  H + H G     + D C  V KT +
Sbjct: 121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC-KKDDSCSFVGKTWT 178

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 45/209 (21%), Positives = 66/209 (31%), Gaps = 44/209 (21%)

Query: 141 KHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECD--ICHKVLKTKSKK 196
               L    K + C F  C  A+   + L  HL  HTG +P F C    C K   +    
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKP-FPCKEEGCEKGFTSLH-- 58

Query: 197 SSGISKNENLR------------PCT--LCDKKLASERKLKEHIRKQHPTSVEADLIRRE 242
                   +L              C    CD +  ++  +K+H  + H            
Sbjct: 59  --------HLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH----------NI 100

Query: 243 KYEREKVQCPYCAKFLSRKEKLNRHIRTVHTDVN-YKC--EICGEEFLSKTRYNRHVVTH 299
           K          C K   +  +L  H  + HT    Y+C  E C + F   +R  RH   H
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

Query: 300 EEKQKFEC-ECGYVTCNKYRLTEHVRRTH 327
                 +   C +V        +HV   H
Sbjct: 160 AGYPCKKDDSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 33/124 (26%), Positives = 41/124 (33%), Gaps = 13/124 (10%)

Query: 361 FKC--VFCEKSFARNCNLKLHIRRYHDKSDNTEC--PLCGKSFPSRGRLNEHLIQVHPAQ 416
           F C    CEK F    +L  H    H    N  C    C   F ++  + +H        
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRH-SLTHTGEKNFTCDSDGCDLRFTTKANMKKH-FNRFHNI 100

Query: 417 KHQ---CHI--CNKIVVSEKTLKKHLLLHTNSEPFHCPE--CGKAFKFKRYVTLHMRTHT 469
           K     CH   C K       LK H   HT   P+ CP   C K F     +  H + H 
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 160

Query: 470 GNWP 473
           G   
Sbjct: 161 GYPC 164

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 51.8 bits (125), Expect = 6e-08
 Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 23/127 (18%)

Query: 360 RFKCVF--CEKSFARNCNLKLHIRRYHDKSDNT-----EC--PLCGKSFPSRGRLNEHLI 410
           R+ C F  C  ++ +N  L+ H    H     T      C    C K F S   L  H +
Sbjct: 12  RYICSFADCGAAYNKNWKLQAH-LCKH-----TGEKPFPCKEEGCEKGFTSLHHLTRHSL 65

Query: 411 QVHPAQK-HQC--HICNKIVVSEKTLKKHLLLHTN--SEPFHC--PECGKAFKFKRYVTL 463
             H  +K   C    C+    ++  +KKH     N     + C    CGKAFK    + +
Sbjct: 66  -THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKV 124

Query: 464 HMRTHTG 470
           H  +HT 
Sbjct: 125 HQFSHTQ 131

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 42/190 (22%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 295 HVVTHEEKQKFEC---ECGYVTCNKYRLTEHVRRTHL--KDYKVLCPICGYGCFRNAELE 349
                   +++ C   +CG      ++L  H    H   K +      C  G      L 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 350 EHFISAHSADR-FKC--VFCEKSFARNCNLKLHIRRYH-DKSDNTECPL--CGKSFPSRG 403
            H ++ H+ ++ F C    C+  F    N+K H  R+H  K     C    CGK+F    
Sbjct: 62  RHSLT-HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN 120

Query: 404 RLNEHLIQVHPAQK-HQCH--ICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFK-FKR 459
           +L  H    H  Q  ++C    C+K       LK+H  +H          C    K +  
Sbjct: 121 QLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTL 179

Query: 460 YVTLHMRTHT 469
           Y+      H 
Sbjct: 180 YLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 38/190 (20%), Positives = 58/190 (30%), Gaps = 50/190 (26%)

Query: 122 KLFDCH--ICGKTVVTEKNYKKHMQLHSDDKPFEC--QFCRKAFKLKYYLTLHLRTHTGV 177
           K F C    C K   +  +  +H   H+ +K F C    C   F  K  +  H      +
Sbjct: 41  KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNI 100

Query: 178 RPM-FECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHIRKQHPTSVEA 236
           +   + C   +                        C K      +LK H    H      
Sbjct: 101 KICVYVCHFEN------------------------CGKAFKKHNQLKVHQF-SH------ 129

Query: 237 DLIRREK-YEREKVQC--PYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRY 292
               ++  YE     C    C K  S   +L RH +  H      K + C     + T Y
Sbjct: 130 ---TQQLPYE-----CPHEGCDKRFSLPSRLKRHEKV-HAGYPCKKDDSCSFVGKTWTLY 180

Query: 293 NRHVV-THEE 301
            +HV   H++
Sbjct: 181 LKHVAECHQD 190

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTG--VRP 179
               C ICGK      +  +H   HS +KP+ C  C   FK K  ++ H+R+H G   +P
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65

Query: 180 MFECDICHK 188
            + C  C K
Sbjct: 66  -YICQSCGK 73

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 52.5 bits (127), Expect = 5e-09
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHT--NSEPFH 447
            C +CGK F     LN H +  H  +K + C +C      +  +  H+  H     +P+ 
Sbjct: 9   ACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 448 CPECGKAFKFKRYVTLHM-RTHTG 470
           C  CGK F    ++  H+ + H+G
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPT-FV 476
             C IC KI      L +H L H+  +P+ CP CG  FK K  ++ H+R+H G+    ++
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 477 CKIC 480
           C+ C
Sbjct: 68  CQSC 71

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSS--GISKN 203
            S      C+ C K F+  Y+L  H  +H+G +P + C +C    K K + S        
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 204 ENLRP--CTLCDKKLASERKLKEHIRKQH 230
              +P  C  C K  +    L  HI++ H
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
            + S    C  CGK F+   ++  H  +H+G  P + C +C
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP-YSCPVC 41

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 250 QCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYNRHVVTH--EEKQKFE 306
            C  C K       LNRH  + H+ +  Y C +CG  F  K R + HV +H     + + 
Sbjct: 9   ACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 307 C-ECGYVTCNKYRLTEHVRRTH 327
           C  CG        L  H+++ H
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.6 bits (96), Expect = 8e-05
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 9  EK-FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH---G 64
              +C +C        +L  H K  H+ E    CP CG  F  +  ++ H    H    
Sbjct: 5  SSGVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSV 62

Query: 65 ADPFLCIPCNKPFSKIENYRLHQRRYH 91
            P++C  C K FS+ ++   H ++ H
Sbjct: 63 GKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 54.7 bits (132), Expect = 6e-10
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSD---DKPFECQFCRKAFKLKYYLTLHLRTHTGVR 178
               C ICG T   + +   H + H++      F C+FC K F+    +  H        
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 179 PMFECDICHKV 189
            +   +     
Sbjct: 66  LLAPQESSGPS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.8 bits (127), Expect = 3e-09
 Identities = 15/66 (22%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSE---PFHCPECGKAFKFKRYVTLHMRTHTGNWPT 474
            QC IC      + +L  H   H  +     F C  CGK F+    V  H          
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 475 FVCKIC 480
              +  
Sbjct: 68  APQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 361 FKCVFCEKSFARNCNLKLHIRRYHDKSDNT---ECPLCGKSFPSRGRLNEHLIQVHPAQK 417
            +C  C  +  +  +L  H R+ H ++       C  CGK F     +  H  + HPA  
Sbjct: 8   LQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 418 HQCH 421
               
Sbjct: 67  LAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 46.2 bits (110), Expect = 6e-07
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHT---GVRPMFECDICHKVLKTKS 194
            S     +C+ C    + K  L  H R H         F C+ C K  +   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPD 52

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.9 bits (104), Expect = 4e-06
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 335 CPICGYGCFRNAELEEHFISAHSADR----FKCVFCEKSFARNCNLKLHIRRYHDKSDNT 390
           C ICG+ C + A L  H    H+       F C FC K F +  ++  H  + H      
Sbjct: 10  CEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68

Query: 391 ECPLCGKSF 399
                G S 
Sbjct: 69  PQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 15/64 (23%), Positives = 20/64 (31%), Gaps = 5/64 (7%)

Query: 250 QCPYCAKFLSRKEKLNRHIRTVHTDVN----YKCEICGEEFLSKTRYNRHVVTHEEKQKF 305
           QC  C     +K  LN H R  H +      + CE CG+ F        H          
Sbjct: 9   QCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 306 ECEC 309
             + 
Sbjct: 68  APQE 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.9 bits (96), Expect = 5e-05
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPT--FVCKIC 480
            + S    C  CG   + K  +  H R H        F C+ C
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFC 44

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 11 FSCSLCSYSVTIKRNLIMHIKRKHTDEFSIL---CPECGRGFFNEKELAAHKIEIHGADP 67
            C +C ++   K +L  H +RKH +  + L   C  CG+ F     +AAH+ + H A  
Sbjct: 8  LQCEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 68 FLCIPCNKPFS 78
                + P S
Sbjct: 67 LAPQESSGPSS 77

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 56.4 bits (137), Expect = 8e-10
 Identities = 47/209 (22%), Positives = 73/209 (34%), Gaps = 72/209 (34%)

Query: 277 YKCEICGEEFLSKTRYNRHVVT---HEEKQKFEC-ECGYVTCNK-----YRLTEHVRRTH 327
            + + C +EF S+ +   H+ +   H E+++F C   G     +     Y L  H+ R H
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRH 62

Query: 328 L--KDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYH- 384
              K +K  C   G                          C KS++R  NLK H+ R H 
Sbjct: 63  TGEKPHK--CTFEG--------------------------CRKSYSRLENLKTHL-RSHT 93

Query: 385 -DKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNS 443
            +K    E   C K+F +               KHQ                    H+N 
Sbjct: 94  GEKPYMCEHEGCSKAFSNASDRA----------KHQNRT-----------------HSNE 126

Query: 444 EPFHC--PECGKAFKFKRYVTLHMRTHTG 470
           +P+ C  P C K +     +  H++T  G
Sbjct: 127 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 54.1 bits (131), Expect = 5e-09
 Identities = 29/128 (22%), Positives = 45/128 (35%), Gaps = 29/128 (22%)

Query: 67  PFLCIPCNKPFSKIENYRLHQRRYHLNSVNK--ECKICHKVLRTARLSEHMKQVHYAKLF 124
                 C++ F   E    H    H++   K   C                         
Sbjct: 3   DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG---------------------- 40

Query: 125 DCHICGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFE 182
            C    +    +     HM+ H+ +KP +C F  CRK++     L  HLR+HTG +P + 
Sbjct: 41  GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP-YM 99

Query: 183 C--DICHK 188
           C  + C K
Sbjct: 100 CEHEGCSK 107

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.1 bits (123), Expect = 6e-08
 Identities = 36/158 (22%), Positives = 57/158 (36%), Gaps = 31/158 (19%)

Query: 42  CPECGRGFFNEKELAAHKIEIH---GADPFLCIPCN-----KPFSKIENYRLHQRR---- 89
              C + F ++++L  H    H       F+C         +PF       +H RR    
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65

Query: 90  --YHLNSVNKECKI--CHKVL-RTARLSEHMKQVHYA-KLFDCH--ICGKTVVTEKNYKK 141
             +       +C    C K   R   L  H++  H   K + C    C K      +  K
Sbjct: 66  KPH-------KCTFEGCRKSYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAK 117

Query: 142 HMQ-LHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTG 176
           H    HS++KP+ C+   C K +     L  H++T  G
Sbjct: 118 HQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.0 bits (115), Expect = 6e-07
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 11/78 (14%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQ---LHSDDKPFECQFC-----RKAFKLKYYLTLHLRT 173
                  C +   +++    H+    +H + K F C +       + FK +Y L +H+R 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 174 HTGVRPMFECDI--CHKV 189
           HTG +P  +C    C K 
Sbjct: 62  HTGEKP-HKCTFEGCRKS 78

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 5/71 (7%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLH----SDDKPFECQFCRKAFKLKYYLTLHLRTHTGV 177
           K + C  C KT   ++    H + +         F C  C K F  +  +  H     G 
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73

Query: 178 RPMFECDICHK 188
               E +    
Sbjct: 74  DG-VEGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 138 NYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPM---FECDICHK 188
           +     + H+ +KP+ C  C K F+ K  L +H + +     +   F C  C K
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGK 55

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 432 TLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPT---FVCKIC 480
           +       HT  +P+ C  C K F+ K+ + +H + +         FVC  C
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKC 53

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.0 bits (110), Expect = 7e-07
 Identities = 15/90 (16%), Positives = 23/90 (25%), Gaps = 25/90 (27%)

Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE 450
            C  C K+F  +  L+ H                K       +            F C +
Sbjct: 17  ACSHCDKTFRQKQLLDMHF---------------KRYHDPNFVPA---------AFVCSK 52

Query: 451 CGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
           CGK F  +  +  H     G       +  
Sbjct: 53  CGKTFTRRNTMARHADNCAGPDG-VEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 31/98 (31%)

Query: 361 FKCVFCEKSFARNCNLKLHIRRYHDKSDNT---ECPLCGKSFPSRGRLNEHLIQVHPAQK 417
           + C  C+K+F +   L +H +RYHD +       C  CGK+F  R               
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN-------------- 61

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAF 455
                         T+ +H       +       G + 
Sbjct: 62  --------------TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 17/108 (15%), Positives = 29/108 (26%), Gaps = 26/108 (24%)

Query: 55  LAAHKIEIH-GADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSE 113
             +     H G  P+ C  C+K F + +   +H +R                        
Sbjct: 3   SGSSG-RTHTGEKPYACSHCDKTFRQKQLLDMHFKR------------------------ 37

Query: 114 HMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAF 161
           +         F C  CGKT        +H    +     E +    + 
Sbjct: 38  YHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.8 bits (125), Expect = 5e-09
 Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 29/95 (30%)

Query: 138 NYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKS 197
           +     + HS +KP+EC  C   F     + +H+                          
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT--------------------- 40

Query: 198 SGISKNENLRP--CTLCDKKLASERKLKEHIRKQH 230
                 EN+    C  CD  +A +  L  H+RKQH
Sbjct: 41  ------ENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 432 TLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG-NWPTFVCKICNATIS 485
           +       H+  +P+ C  C   F     + +H+      N   F C  C+  I+
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA 56

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 418 HQCHICNKIVVSEKTLKKHLLLHT--NSEPFHCPECGKAFKFKRYVTLHMRT-HTG 470
           ++C+IC+       T+K H+L     N   FHCP C      K  + +H+R  H+ 
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 361 FKCVFCEKSFARNCNLKLHIRRYHDKSDNT-ECPLCGKSFPSRGRLNEHLIQVH 413
           ++C  C   F ++  +K+HI + H ++     CP C      +  L  HL + H
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 24/108 (22%), Positives = 35/108 (32%), Gaps = 41/108 (37%)

Query: 167 LTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKLASERKLKEHI 226
                RTH+G +P +EC ICH                                  +K HI
Sbjct: 3   SGSSGRTHSGEKP-YECYICHARFTQSGT--------------------------MKMHI 35

Query: 227 RKQHPTSVEADLIRREKYEREKV-QCPYCAKFLSRKEKLNRHIRTVHT 273
            ++H              E      CP+C   ++RK  L  H+R  H+
Sbjct: 36  LQKHT-------------ENVAKFHCPHCDTVIARKSDLGVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 263 KLNRHIRTVHTDVN-YKCEICGEEFLSKTRYNRHVVTH--EEKQKFEC-ECGYVTCNKYR 318
                 RT H+    Y+C IC   F        H++    E   KF C  C  V   K  
Sbjct: 2   SSGSSGRT-HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 319 LTEHVRRTH 327
           L  H+R+ H
Sbjct: 61  LGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 25 NLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGAD--PFLCIPCNKPFSKIEN 82
          +      R H+ E    C  C   F     +  H ++ H  +   F C  C+   ++  +
Sbjct: 2  SSGSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 83 YRLHQRRYH 91
            +H R+ H
Sbjct: 61 LGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%)

Query: 319 LTEHVRRTHL--KDYKVLCPICGYGCFRNAELEEHFISAHSADR---FKCVFCEKSFARN 373
                 RTH   K Y+  C IC     ++  ++ H I     +    F C  C+   AR 
Sbjct: 3   SGSS-GRTHSGEKPYE--CYICHARFTQSGTMKMH-ILQKHTENVAKFHCPHCDTVIARK 58

Query: 374 CNLKLHIRRYH 384
            +L +H+R+ H
Sbjct: 59  SDLGVHLRKQH 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKS 194
            S   P +C  C  +   K  L +H R H   RP F+C+ C    K  S
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPS 51

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 13/55 (23%), Positives = 25/55 (45%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
               C  C  +  ++   + H ++H  D+PF+C +C    K    L+ H++   G
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.6 bits (109), Expect = 7e-07
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 420 CHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
           C  C+    S+  L+ H  +H    PF C  C    K    ++ HM+   G
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.5 bits (122), Expect = 1e-08
 Identities = 19/58 (32%), Positives = 27/58 (46%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
           K + C  CGK         +H ++H+ +KP++C  C KAF     L  H R HT    
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS 70

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKS 194
               +HS +KP+ C  C KAF     L  H R HTG +P ++C  C K     S
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP-YKCLECGKAFSQNS 56

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.2 bits (108), Expect = 9e-07
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 433 LKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
                 +H+  +P+ C ECGKAF     +  H R HTG  P + C  C
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP-YKCLEC 48

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 19/53 (35%), Positives = 25/53 (47%)

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
           + C  C K       L +H  +HT  +P+ C ECGKAF     +  H R HT 
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 6/72 (8%)

Query: 122 KLFDCHI--CGKTVVTEKNYKKHMQL-HSDDKPFECQF--CRKAFKLKYYLTLHLRTHTG 176
               C    CG+     +    H +  H   K F C    C K+F  K +L  H++ H+ 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 177 VRPMFECDICHK 188
            R  + C+    
Sbjct: 66  TRD-YICEFSGP 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQK-HQC--HICNKIVVSEKTLKKHLLLHTNSEPFH 447
           + P CG+ F +R  LN H    H  QK   C    C K    +K LK+H+ LH+++  + 
Sbjct: 11  DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI 70

Query: 448 CPECGKAF 455
           C   G + 
Sbjct: 71  CEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 423 CNKIVVSEKTLKKHL-LLHTNSEPFHCPE--CGKAFKFKRYVTLHMRTHTGNWPTFVCKI 479
           C +I  + + L  H    H + + F CPE  CGK+F FK+++  HM+ H+     ++C+ 
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEF 73

Query: 480 C 480
            
Sbjct: 74  S 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 111 LSEHMKQVHYA-KLFDC--HICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAF 161
           L+ H K  H   K F C    CGK+   +K+ K+HM+LHSD + + C+F   + 
Sbjct: 25  LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 6/54 (11%)

Query: 146 HSDDKPFECQF--CRKAFKLKYYLTLHLR-THTGVRPMFECD--ICHKVLKTKS 194
            S      C F  C + F  + YL  H +  H   +  F C    C K    K 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKK 54

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
           CGK        K H   H+   P+EC    C K F L   L  H + H G     + D C
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC-KKDDSC 67

Query: 187 HKVLKTKS 194
             V KT +
Sbjct: 68  SFVGKTWT 75

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 18/68 (26%), Positives = 23/68 (33%), Gaps = 5/68 (7%)

Query: 418 HQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHC--PECGKAFKFKRYVTLHMRTHTGNWP 473
           + CH   C K       LK H   HT   P+ C    C K F     +  H + H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 474 TFVCKICN 481
                 C+
Sbjct: 62  -KKDDSCS 68

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 5/82 (6%)

Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCH--ICNKIVVSEKTLKKHLLLHTNSEPFH 447
               CGK+F    +L  H    H  Q  ++C    C+K       LK+H  +H       
Sbjct: 5   HFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 63

Query: 448 CPECGKAFK-FKRYVTLHMRTH 468
              C    K +  Y+      H
Sbjct: 64  DDSCSFVGKTWTLYLKHVAECH 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMF 181
           K F C IC +      +   H++ H+ +KPF C  C + F        H        P  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LP-I 59

Query: 182 ECDICHK 188
             D   +
Sbjct: 60  LEDKVEE 66

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 6/84 (7%)

Query: 391 ECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP 449
           +C +C ++F     L  H I+ H  +K   C IC +        K+H  +     P    
Sbjct: 5   QCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILED 62

Query: 450 ECGKAFKFKRYVTLH---MRTHTG 470
           +  +      ++      ++   G
Sbjct: 63  KVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 15/52 (28%), Positives = 19/52 (36%)

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHT 469
            QC IC +       L  H+  HT  +PF C  CG+ F        H     
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 98  ECKICHKVL-RTARLSEHMKQVHYA-KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQ 155
           +C+IC +   R+  L+ H++  H   K F C ICG+        K+H  +     P    
Sbjct: 5   QCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILED 62

Query: 156 FCRKAFKLKYYLTLH---LRTHTG 176
              +     Y+L      L+   G
Sbjct: 63  KVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 445 PFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
           PF C  C + F    ++T H+RTHTG  P F C IC
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDIC 37

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 250 QCPYCAKFLSRKEKLNRHIRTVHT-DVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFEC- 307
           QC  C +  SR + L  HIRT HT +  + C+ICG +F       RH             
Sbjct: 5   QCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDIQHIL-PILED 62

Query: 308 ECGYVTCNKYRLTEHVR--RTH 327
           +   +    Y L   V   +  
Sbjct: 63  KVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 11 FSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLC 70
          F C +C  + +   +L  H  R HT E    C  CGR F    E   H+  I    P L 
Sbjct: 4  FQCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKRHRD-IQHILPILE 61

Query: 71 IPCNKPFSKIENYRLHQRR 89
              +  SK  +      R
Sbjct: 62 DKVEELLSKNYHLENEVAR 80

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 28/127 (22%), Positives = 40/127 (31%), Gaps = 46/127 (36%)

Query: 150 KPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPC 209
           KPF+C+ C + F    +LT H+RTHTG +P F CDIC                       
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDIC----------------------- 37

Query: 210 TLCDKKLASERKLKEHIRKQHPTSVEADLIRREK-YEREKVQCPYCAKFLSRKEKLNRHI 268
               +K A   + K H             I+                + LS+   L   +
Sbjct: 38  ---GRKFARSDERKRHRD-----------IQHILPIL-----EDKVEELLSKNYHLENEV 78

Query: 269 RT--VHT 273
                  
Sbjct: 79  ARLKKLV 85

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.9 bits (121), Expect = 4e-08
 Identities = 13/104 (12%), Positives = 35/104 (33%), Gaps = 6/104 (5%)

Query: 371 ARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVH-----PAQKHQCHICNK 425
           +   + KL+       +    C  C  ++ +   L  H+ +         +    +    
Sbjct: 2   SSGSSGKLY-GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60

Query: 426 IVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHT 469
               +++L +        +   C  CG +F+  + +++HM    
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.9 bits (108), Expect = 2e-06
 Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 6/100 (6%)

Query: 138 NYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLR-THTGVRPMFECDICHKVLKTKSKK 196
           + K +  + +    F C+ C  A+     LT+H+  T        E D  +    +K +K
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 197 SSGISKNENLRP-----CTLCDKKLASERKLKEHIRKQHP 231
            S +             C  C     S + L  H+ K   
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 16/131 (12%), Positives = 35/131 (26%), Gaps = 27/131 (20%)

Query: 55  LAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQRR-YHLNSVNKECKICHKVLRTARLSE 113
              +     GA  F C  C+  +  +    +H     H    N E               
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHET-------------- 52

Query: 114 HMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHL-- 171
                      + +    +   +++  +        K  +C +C  +F+    L++H+  
Sbjct: 53  ----------DNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK 102

Query: 172 RTHTGVRPMFE 182
             H        
Sbjct: 103 TKHYQKVSGPS 113

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 5/95 (5%)

Query: 295 HVVTHEEKQKFEC-ECGYVTCNKYRLTEHVRRTHLKDYK----VLCPICGYGCFRNAELE 349
           +        KF C +C         LT H+  T                 +   R   L 
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 350 EHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYH 384
           E      +    KC++C  SF    +L +H+ +  
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
            S +KPF C  C KAF  K YL +H +TH   +P    
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
            +  +PF C  C KAF  K Y+ +H +TH  
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE 35

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.0 bits (118), Expect = 5e-08
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
            H  +   DKP++C  C+ +F+ K  L  H   HTG +P + C+IC  
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGA 53

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 48.2 bits (116), Expect = 9e-08
 Identities = 17/58 (29%), Positives = 26/58 (44%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
           K + C  C  +   + N   H  +H+ +KP+ C  C   F     L  H R H+G +P
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 45.9 bits (110), Expect = 7e-07
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 433 LKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
              H  +  + +P+ C  C  +F++K  +  H   HTG  P + C IC
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNIC 51

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 405 LNEHLIQ---VHPAQK-HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRY 460
           +  H      +  + K ++C  C      +  L  H  +HT  +P+ C  CG  F     
Sbjct: 1   MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN 60

Query: 461 VTLHMRTHTG 470
           +  H R H+G
Sbjct: 61  LKTHTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 25 NLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH-GADPFLCIPCNKPFSKIENY 83
          +   H       +    C  C   F  +  LA+HK  +H G  P+ C  C   F++  N 
Sbjct: 4  HHHHH-SHMTHSDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANL 61

Query: 84 RLHQR 88
          + H R
Sbjct: 62 KTHTR 66

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.5 bits (119), Expect = 6e-08
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 369 SFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK-HQCHI--CNK 425
           S   +       R ++      + P C K +     L  HL + H  +K ++C    C+ 
Sbjct: 2   SSGSSGPDLEKRRIHY-----CDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDW 55

Query: 426 IVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHT 469
                  L +H   HT ++PF C  C ++F    ++ LHM+ H 
Sbjct: 56  RFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 398 SFPSRGRLNEHLIQVHPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHC--PECGK 453
           S  S G   E        + H C    C K+      LK HL  HT  +P+ C    C  
Sbjct: 2   SSGSSGPDLEK------RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55

Query: 454 AFKFKRYVTLHMRTHTGNWPTFVCKICN 481
            F     +T H R HTG  P F C +CN
Sbjct: 56  RFARSDELTRHYRKHTGAKP-FQCGVCN 82

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHT 175
           C           +H + H+  KPF+C  C ++F    +L LH++ H 
Sbjct: 53  CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 29/132 (21%), Positives = 43/132 (32%), Gaps = 42/132 (31%)

Query: 145 LHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISK 202
                +   C +  C K +    +L  HLRTHTG +P ++C                   
Sbjct: 9   DLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTW----------------- 50

Query: 203 NENLRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKE 262
                    CD + A   +L  H RK              K      QC  C +  SR +
Sbjct: 51  -------EGCDWRFARSDELTRHYRKH----------TGAK----PFQCGVCNRSFSRSD 89

Query: 263 KLNRHIRTVHTD 274
            L  H++  H +
Sbjct: 90  HLALHMKR-HQN 100

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.6 bits (117), Expect = 8e-08
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
           + + C  CGK+     +  KH + H+ +KP++C  C KAF  + +L  H R HTG  P
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.2 bits (116), Expect = 1e-07
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           +      + + ++C  C K+F     L+ H RTHTG +P ++CD C K
Sbjct: 8   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-YKCDECGK 54

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.7 bits (107), Expect = 2e-06
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 432 TLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
           +  +          + C ECGK+F     ++ H RTHTG  P + C  C
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-YKCDEC 52

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.2 bits (103), Expect = 6e-06
 Identities = 21/53 (39%), Positives = 28/53 (52%)

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
           ++C  C K       L KH   HT  +P+ C ECGKAF  + ++  H R HTG
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 +  KP+ C  C K F LK  L +H R+HTGV+P    
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C +C K F  K  + +H R+HTG
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 17/38 (44%), Positives = 20/38 (52%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                S +KP+EC  C KAF  K  L +H RTH GV  
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG 40

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                +  +P+ C ECGKAF +K  + +H RTH G
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECD 184
                 + +KP+ C  C KAF L  +L  HLR HT         
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C  CGKAF    ++  H+R HT 
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP+ C  C KAF  K YL +H+RTH+G +P    
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                   +P+ C ECGKAF  K Y+ +HMRTH+G
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 +  KP+ C  C KAF+ K YL +H RTHTG       
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGKAF+ K Y+ +H RTHTG
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 122 KLFDCHICGKTVVTEKNYKKHM--QLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGV 177
             + C +C +      N+ +H       + K + C FC K F  K  +T H++    +
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.6 bits (109), Expect = 7e-07
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 418 HQCHICNKIVVSEKTLKKHL--LLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
           ++C +C+++        +H       N + + CP C K F  K  +T H++    
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 3/45 (6%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRT--HTGVRPMFECDICHK 188
              +  + C+ C + +        H  T     V+  + C  C K
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCFK 48

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 6/44 (13%), Positives = 10/44 (22%), Gaps = 3/44 (6%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRT--HTGNWPTFVCKICN 481
                 + C  C + +        H  T         + C  C 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCF 47

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 250 QCPYCAKFLSRKEKLNRHIRTV-HTDVN-YKCEICGEEFLSKTRYNRHVVTH 299
           +C  C++  +      RH  T    +V  Y C  C +EF  K     HV   
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 30 IKRKHTDEFSILCPECGRGFFNEKELAAHKIEIH--GADPFLCIPCNKPFSKIENYRLHQ 87
          ++     E +  C  C R + +      H +  H      + C  C K F++ +N   H 
Sbjct: 1  MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 88 RRYH 91
          +  H
Sbjct: 61 KIIH 64

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHL-RTHTG 176
           + F C +C +    +++ K+H + H+++KP+ C  C +AF  +  L  H  + H+G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 150 KPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           + F C+ C +AF  + +L  H R+HT  +P + C +C++
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKP-YPCGLCNR 38

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHM-RTHTGN 471
             C +C +    ++ LK+H   HTN +P+ C  C +AF  +  +  H  + H+GN
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 445 PFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC 480
            F C  C +AF  + ++  H R+HT   P + C +C
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKP-YPCGLC 36

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP+EC+ C KAF  K +L  H +THTG +P    
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 9e-06
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C  C KAF  K ++  H +THTG
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHL-RTHTGVRPMFECDICHK 188
                S  KP+ CQ C K F    +L  H+ + HT  RP  +C +   
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVS 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 40.3 bits (95), Expect = 4e-05
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHM-RTHTGNWPTFVCKICNATISS 486
            +  +P+ C  CGK F    ++  H+ + HT   P   C++  +  SS
Sbjct: 7   GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 354 SAHSADR-FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPS 401
           S+ S  + + C  C K F+R  +L  HI++ H      +C +      S
Sbjct: 5   SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 S  KP+EC+ CRK F    +L  H R HTG R     
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK 478
            +  +P+ C EC K F    ++  H R HTG        
Sbjct: 7   GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGPS 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.5 bits (109), Expect = 4e-07
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP+EC  C+KAF  K  L +H RTHTG       
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C EC KAF  K  + +H RTHTG
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                S +KP+ C  C K F  K  L+ H RTHTG +P    
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                +  +P+ C ECGK F  K  ++ H RTHTG
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + + P+EC  C KAF  KY L  H RTH G +P    
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T   P+ C ECGKAF  K  +  H RTH G
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + ++ +EC  C KAF  K  L +H R HTG +P    
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T    + C ECGKAF  K  + +H R HTG
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 +  +P+EC  C KAFK K  L  H R+HTG +P    
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T   P+ C ECGKAFK K  +  H R+HTG
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KPFEC  C K+F +   L  H R HTG +P    
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKP-SGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +PF C ECGK+F     +  H R HTG
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + ++ +EC  C KAF  K  L++H R H G +P    
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T    + C ECGKAF  K  +++H R H G
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++C  C KAF  K  L +H ++HTG R     
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C +CGKAF  K  + +H ++HTG
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP+EC  C K+F  K  L +H R HTG  P    
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 9e-06
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C +CGK+F  K  + +H R HTG
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.1 bits (106), Expect = 8e-07
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 126 CHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
           C  CG         KKH++ H+D +P+ C +C  +FK K  LT H+++   
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.8 bits (100), Expect = 5e-06
 Identities = 19/54 (35%), Positives = 27/54 (50%)

Query: 417 KHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
           K+ C  C         LKKH+  HT+  P+HC  C  +FK K  +T HM++   
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KPFEC  C+KAF  K  L +H RTHTG +P    
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +PF C EC KAF  K  + +H RTHTG
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 9e-07
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++C  C KAF+ +  L +H  TH+G +P    
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGKAF+ +  + +H  TH+G
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 9e-07
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP+EC  C K+F  K  L +H + HTG +P    
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C  CGK+F  K  + +H + HTG
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP+EC  C KAF  +  L++H R H+G +P    
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C  CGKAF  ++ +++H R H+G
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECD 184
                 S +KP++C  C K +K +  L  H R HTG +      
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL-SGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 +  +P+ C ECGK +K +  +  H R HTG
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP EC+ C K+F     L +H R HTG  P    
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP-SGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P  C ECGK+F F   + +H R HTG
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 S +KPF+C+ C KAF+   +L  HLR HTG +P    
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 +  +PF C ECGKAF+   ++  H+R HTG
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KPF+C  C K++  + +LT H R HTG +P    
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +PF C ECGK++  + ++T H R HTG
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                 S  K  +C  C + F LK +L  H R HTG +P
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP 40

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 ++++   C ECG+ F  K ++  H R HTG
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 +  KP++C  C KAF     L  H R HTG +P    
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGKAF     +  H R HTG
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                 + + P+EC  C K F  K  L  H +TH+G   
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG 40

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
            T   P+ C ECGK F  K  +  H +TH+G
Sbjct: 7   GTGENPYECCECGKVFSRKDQLVSHQKTHSG 37

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 S +KPF+C+ C K F    +L  H R HTG +P    
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 +  +PF C ECGK F    ++  H R HTG
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP +C  C KAF  K  L +H RTH   +     
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
            T  +P  C ECGKAF +K  + +H RTH  
Sbjct: 7   GTGEKPCKCTECGKAFCWKSQLIMHQRTHVD 37

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                + +KPF+C+ C   F     L  HLR+H    P
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP 40

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
            T  +PF C ECG  F +   +  H+R+H  
Sbjct: 7   GTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KPF+C  C KAF     L  H R HTG +P    
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +PF C +CGKAF     +  H R HTG
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                +  KPFEC  C K+F+ K  L  H R HTG +     
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +PF C  CGK+F+ K  +  H R HTG
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
            S + P+EC  C KAF  K  L  H RTH G       
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESG-PSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
            +   P+ C ECGKAF  K  +  H RTH G
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAG 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++C+ C K +  K+ L +H + HTG RP    
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C +CGK +  K  + +H + HTG
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                  +KP+ C  C KAF  K  L +H+R HTG  P
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP 473
                   +P+ C +CGKAF  K  + +H+R HTG+ P
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP+EC+ C KAF    +L  H R HTG +P    
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP-SGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGKAF    ++  H R HTG
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP+EC  C KAF ++  LT H   HTG +P    
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C +CGKAF  +  +T H   HTG
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                   +KP++C  C K+F   Y LT H  THT  +P
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP 40

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                    +P+ C ECGK+F     +T H  THT 
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                +  K FEC  C KAF  K  L++H + HTG +P    
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP-SGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  + F C ECGKAF  K  +++H + HTG
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KPF+C  C K F  +  L +H + HTG +P    
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +PF C ECGK F  +  + +H + HTG
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                S +KP++C+ C K +  +  L +H R H G + 
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT 40

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 9e-06
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                +  +P+ C +CGK +  +  + +H R H G
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +K + C+ C K+F     L  H R H+G +P    
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  + ++C ECGK+F     +  H R H+G
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 14/38 (36%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                S +K   C  C K F     L +H R H G + 
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC 40

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 9e-06
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                +  +   C ECGK F +   + +H R H G
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 10/39 (25%), Positives = 13/39 (33%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                   ++   C  C K F        H R HTG +P
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKP 40

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 10/36 (27%), Positives = 11/36 (30%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                        C +CGK F        H R HTG
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 142 HMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECD 184
                + +KPF C +  C   F     L+ H R+H+GV+P     
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 3/44 (6%)

Query: 436 HLLLHTNSEPFHC--PECGKAFKFKRYVTLHMRTHTGNWPTFVC 477
                T  +PF C  P CG  F     ++ H R+H+G  P    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGP 45

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                +  K F+C  C+K F     LT+H R HTG +P    
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                   + F C EC K F     +T+H R HTG
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 S ++PF+C  C K F  + +L  HLR H+  +     
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 +   PF C ECGK F  + ++  H+R H+ 
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + + PF C  C K F  K  L +H + HTG RP    
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T   PF C ECGK F  K  + +H + HTG
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 S +KP++C  C KAF    +L  H R HTG RP    
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 +  +P+ C ECGKAF    ++  H R HTG
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +K ++C  C K F     L+ H + HTG +P    
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP-SGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  + + C ECGK F     ++ H + HTG
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 S +KP+ C +C KAF L   L  H R HTG +P    
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 +  +P+ C  CGKAF     +  H R HTG
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
                 +D K + C  C KAF   ++LT H + HT 
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T+S+ ++C ECGKAF    ++T H + HT 
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                S ++P+ C  C K F    +L  HL+ H   +     
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                +   P+ C ECGK F    ++  H++ H  
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP++C  C K+F  K  L +H + HTG R     
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH-SGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C +CGK+F +K  + +H + HTG
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++C  C K F    +L  H   HTG +P    
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGK F    ++  H   HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECD 184
                + +KPF+C  C K+F  +  L  H   HT  +P     
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +PF C  CGK+F  +  +  H   HT 
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++C  C KAF     L  H R HTG +P    
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGKAF     +  H R HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP+EC  CRKAF     LT H R H+G +P    
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C  C KAF     +T H R H+G
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++C  C K F    +L  H R HTGV+P    
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP-SGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGK F    ++  H R HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++CQ C KAF++  +L  H   H+G RP    
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERP-SGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C  CGKAF+   ++  H   H+G
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                +   P++C  C K+F  K  L +H R HT  +P    
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                P+ C +C K+F  K  + +H R HT 
Sbjct: 7   GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++C  C K F    +L  H R HTG +P    
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP-SGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGK F    ++  H R HTG
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                  +KP++C+ C   F    +L  H+  HTG  P
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP 39

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 9/35 (25%), Positives = 14/35 (40%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                   +P+ C  CG  F    ++  H+  HTG
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
            S  + +ECQ C K+F+ K  LTLH R HTG  P
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP 38

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
            +    + C ECGK+F+ K  +TLH R HTG
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTG 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP+ C  C K+F  K +L  H R HTG +P    
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP 473
                 T  +P+ C ECGK+F  K ++  H R HTG  P
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 22/95 (23%)

Query: 384 HDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQ-CHICNKIVVSEKTLKKHLLLHTN 442
            +   +     C ++F +   L  H+   H     Q  H+C                   
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC------------------- 60

Query: 443 SEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC 477
                CP  GK+FK K  +  H+R HTG       
Sbjct: 61  -YWEECPREGKSFKAKYKLVNHIRVHTGEKS-GPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 18/71 (25%), Positives = 23/71 (32%), Gaps = 10/71 (14%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQ-LHSDDKPF--------ECQFCRKAFKLKYYLTLHLR 172
                  C +T  T      H+   H              EC    K+FK KY L  H+R
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 173 THTGVRPMFEC 183
            HTG +     
Sbjct: 84  VHTGEKS-GPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 12/92 (13%), Positives = 27/92 (29%), Gaps = 19/92 (20%)

Query: 63  HGADPFLCIPCNKPFSKIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVHYAK 122
                     C++ FS +     H    H+    +   +C+                   
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW------------------ 62

Query: 123 LFDCHICGKTVVTEKNYKKHMQLHSDDKPFEC 154
             +C   GK+   +     H+++H+ +K    
Sbjct: 63  -EECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP+ C+ C KAF     L  H R HTG +P    
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP-SGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P++C ECGKAF     +  H R HTG
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
               +P+ C  CG  F+  + +  H+R HTG
Sbjct: 6   SGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                  +KP+ C+ C   F+    L  HLR HTG  P
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP 39

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP++C  C K+F+    LT+H R HTG +P    
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP-SGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C  C K+F++   +T+H R HTG
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + ++P +C  C K+F    +L  H R HTG +P    
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP-SGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP 473
                T   P  C ECGK+F    ++  H R HTG  P
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP+ C  C KAF  K  LT H R HTG +P    
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C ECGKAF  K  +T H R HTG
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP++C  C K F+   YL+ H R HTG +P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP-SGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C ECGK F+   Y++ H R HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.2 bits (100), Expect = 6e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECD 184
                S +KPF+C+ C K F        H R+H+G +P     
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP-SGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                +  +PF C ECGK F        H R+H+G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP+ C  C KAF ++  L  H + HT  +P    
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP-SGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C ECGKAF  +  +  H + HT 
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 +  KP+ C  C KAF +   LT H   HTG +P    
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP-SGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGKAF     +T H   HTG
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP++C+ C K F  +  L  H   HTG +P    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP-SGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C ECGK F  +R +  H   HTG
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP+ C+ C K+F+    L  H R H+G +P    
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP-SGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P++C ECGK+F++   +  H R H+G
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 43.3 bits (103), Expect = 7e-06
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 417 KHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC--PECGKAFKFKRYVTLHMRTHTGNWPT 474
                 C K       LK HL  HT  +P+HC    CG  F     +T H R HTG+ P 
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP- 65

Query: 475 FVCKICN 481
           F C+ C+
Sbjct: 66  FQCQKCD 72

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 31/111 (27%)

Query: 360 RFKCVFCEKSFARNCNLKLHIRRYH--DKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQK 417
                 C K++ ++ +LK H+R  H  +K  + +   CG  F                  
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSD-------------- 51

Query: 418 HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTH 468
                          L +H   HT   PF C +C +AF    ++ LHM+ H
Sbjct: 52  --------------ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 129 CGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTH 174
           CG          +H + H+  +PF+CQ C +AF    +L LH++ H
Sbjct: 43  CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK 478
            T +       CGK +    ++  H+RTHTG  P + C 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCD 39

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 27/125 (21%), Positives = 39/125 (31%), Gaps = 39/125 (31%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNEN 205
            +     +   C K +    +L  HLRTHTG +P + CD                     
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDWDG------------------ 42

Query: 206 LRPCTLCDKKLASERKLKEHIRKQHPTSVEADLIRREKYEREKVQCPYCAKFLSRKEKLN 265
                 C  K A   +L  H RK              +      QC  C +  SR + L 
Sbjct: 43  ------CGWKFARSDELTRHYRKH----------TGHR----PFQCQKCDRAFSRSDHLA 82

Query: 266 RHIRT 270
            H++ 
Sbjct: 83  LHMKR 87

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-06
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                S +KP++C  C K F    +LT H R HTG +P    
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP-SGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                +  +P+ C ECGK F    ++T H R HTG
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 8e-06
 Identities = 79/553 (14%), Positives = 151/553 (27%), Gaps = 151/553 (27%)

Query: 1   MEHSQED-----TEKFSCSL-CSYSVTIKRNLIM-----HI-KRKHTDE-----FSILCP 43
            ++  +D      + F  +  C     + ++++      HI   K         F  L  
Sbjct: 14  HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLS 73

Query: 44  ECGRGFFNEKELAAHKIEIHGAD-PFLCIP----CNKPFSKIENYRLHQRRYHLNSVNKE 98
           +       E+ +     E+   +  FL  P      +P      Y + QR    N     
Sbjct: 74  K------QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY-IEQRDRLYNDNQVF 126

Query: 99  CKICHKVLRT---ARLSEHMKQVHYAKLFDCHI---CGKTVVTEKNYKKHMQLHSDDKPF 152
            K  + V R     +L + + ++  AK          GKT V                  
Sbjct: 127 AK--YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL--------SYKV 176

Query: 153 ECQFCRKAFKLKYYLTL-HLRTHTGVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTL 211
           +C+   K F    +L L +  +   V  M +  + +++    + +S   S N  LR   +
Sbjct: 177 QCKMDFKIF----WLNLKNCNSPETVLEMLQ-KLLYQIDPNWTSRSDH-SSNIKLR---I 227

Query: 212 CDKKLASERKLKEHIRKQHPTSVEADLIRREKYERE-----KVQCPYCAKFL--SRKEKL 264
              +    R LK    K +   +   L+       +      + C    K L  +R +++
Sbjct: 228 HSIQAELRRLLKS---KPYENCL---LVLLNVQNAKAWNAFNLSC----KILLTTRFKQV 277

Query: 265 NRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEE-KQKFECECGYVTCNKYRLTEHV 323
              +            I  +            +T +E K        Y+ C    L   V
Sbjct: 278 TDFL-----SAATTTHISLDHHSM-------TLTPDEVKSLLL---KYLDCRPQDLPREV 322

Query: 324 RRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEK------SFARNCNLK 377
             T+         I          + +      + D +K V C+K      S        
Sbjct: 323 LTTNP----RRLSIIA------ESIRDG---LATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 378 LHIRRYHDKS---DNTECP----------------------LCGKSF----PSRGRLNEH 408
            + + +   S    +   P                      L   S     P    ++  
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429

Query: 409 LIQ----VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLH 464
            I     V    ++  H   + +V    + K         P         +    +   H
Sbjct: 430 SIYLELKVKLENEYALH---RSIVDHYNIPKTFDSDDLIPP---YLDQYFYSHIGH---H 480

Query: 465 MRT--HTGNWPTF 475
           ++   H      F
Sbjct: 481 LKNIEHPERMTLF 493

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 9e-04
 Identities = 55/384 (14%), Positives = 102/384 (26%), Gaps = 85/384 (22%)

Query: 63  HGADPFLCIPCNKPFS---KIENYRLHQRRYHLNSVNKECKICHKVLRTARLSEHMKQVH 119
           +  DP      +   +   +I + +   RR   +   + C +   VL   + ++      
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL---VLLNVQNAKA----- 258

Query: 120 YAKLFDCHICGKTVVTEKN----------YKKHMQLHSDDKPFECQFCRKAFKLKYYLTL 169
               F+   C K ++T +              H+ L            +    LKY   L
Sbjct: 259 -WNAFNLS-C-KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL-LKY---L 311

Query: 170 HLRTHT------GVRPMFECDICHKVLKTKSKKSSGISKNENLRPCTLCDKKL----ASE 219
             R            P     I  + ++       G++  +N +    CDK      +S 
Sbjct: 312 DCRPQDLPREVLTTNP-RRLSIIAESIR------DGLATWDNWKH-VNCDKLTTIIESSL 363

Query: 220 RKLKEHIRKQH-------PTSV--EADLIRR-----EKYEREKVQCPYCAKFLSRKEKLN 265
             L+    ++        P S      L+        K +   V        L  K+   
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423

Query: 266 RHIRTVHTDVNYKCEICGEEFLSKT---RYNRHVVTHEEKQKFECECGYV---------T 313
             I      +  K ++  E  L ++    YN       +         Y           
Sbjct: 424 STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN 483

Query: 314 CNKYRLTEHVRRTHLKDYKVL--------CPICGYGCFRN--AELE--EHFISAHSADRF 361
                     R   L D++ L              G   N   +L+  + +I  +     
Sbjct: 484 IEHPERMTLFRMVFL-DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYE 542

Query: 362 KCVFCEKSFARNCNLKLHIRRYHD 385
           + V     F       L   +Y D
Sbjct: 543 RLVNAILDFLPKIEENLICSKYTD 566

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-06
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                 + +KP++C  C K F+   +L  H   HTG +P    
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP-SGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                 T  +P+ C ECGK F+   ++  H   HTG
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                  +K ++C  C K F    +L  H R HTG +P    
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                   + + C  CGK F    ++  H R HTG
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 9e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                S +KPF+C+ C K F     L  H R HTG +P    
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP-SGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                +  +PF C ECGK F     +  H R HTG
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 9e-06
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                +  KP++C  C K F    +L  H   HTG +P    
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C ECGK F    ++  H   HTG
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP++C  C KAF      T H R HTG RP    
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP-SGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 16/38 (42%), Positives = 18/38 (47%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP 473
                T  +P+ C ECGKAF      T H R HTG  P
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.4 bits (97), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
                 + + PF+C  C + F  + YL  H RTH  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 10/36 (27%), Positives = 14/36 (38%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                     PF C +C + F  + Y+  H RTH  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                + +KP++C  C KAF+    LT H   HTG +P
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP 40

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C ECGKAF+    +T H   HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
                  +K ++C+ C   F     L LH   H G +P
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP 40

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 8/31 (25%), Positives = 11/31 (35%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
               + + C EC   F     + LH   H G
Sbjct: 7   GMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + ++P+ C  C KAF  +  L  H + HTG +P    
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP-SGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T   P+ C  CGKAF  +  +  H + HTG
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP++C  C K F    +L  H   HTG +P    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKP-SGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C ECGK F    ++  H   HTG
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP 473
                P+ C +CGK+F  +  + +H R+ + + P
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 39.2 bits (92), Expect = 6e-05
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRP 179
              + P+ C  C K+F  +  L +H R+ +   P
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFEC 183
                + +KP+ C  C KAF  +  L  H + HTG +P    
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP-SGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +P+ C ECGKAF  +  +  H + HTG
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 433 LKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHT 469
           L +H+ +HT  +PF C  C + F    ++T H+RTHT
Sbjct: 37  LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 15/36 (41%), Positives = 25/36 (69%)

Query: 140 KKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHT 175
            +H+++H+  KPF+C+ C + F    +LT H+RTHT
Sbjct: 38  TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.0 bits (94), Expect = 9e-05
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 138 NYKKHMQLHSDDKPFEC--QFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHK 188
           N   ++      +P+ C  + C + F     LT H+R HTG +P F+C IC +
Sbjct: 8   NLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCRICMR 57

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 324 RRTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRR 382
               ++ Y      C     R+ EL  H         F+C  C ++F+R+ +L  HIR 
Sbjct: 13  VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
            +  +P+ C EC + F     +  H + HT 
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
            S +KP+ C  C++ F     L  H + HT 
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.5 bits (93), Expect = 7e-05
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLR-THTGVRPMFEC 183
                +  KP+EC  C KAF     L  H R  HTG +P    
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP-SGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMR-THTGNWP 473
                T  +P+ C ECGKAF     +  H R  HTG  P
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP 41

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 4/88 (4%)

Query: 349 EEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEH 408
                   + + ++C  C    +       H R      +   CP C   F S     EH
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEH 61

Query: 409 LIQVHPAQKHQCHICNKIVVSEKTLKKH 436
             +    +K  C  C +   S  ++ +H
Sbjct: 62  ESK-CEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 38.3 bits (88), Expect = 6e-04
 Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 2/85 (2%)

Query: 246 REKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKF 305
           +E  QC  C   LS   +   H R         C  C   F S      H    E K+  
Sbjct: 14  KEVYQCRLCNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHESKCEYKKLT 71

Query: 306 ECECGYVTCNKYRLTEHVRRTHLKD 330
             EC     + + +  H    H ++
Sbjct: 72  CLECMRTFKSSFSIWRHQVEVHNQN 96

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.0 bits (88), Expect = 2e-04
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDIC 186
               K   C+ C K F+  Y+L  H  +H+G +P +     
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPS 46

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 3/47 (6%)

Query: 140 KKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTHTGVRPMFECD 184
                  S  +   C    C K +    +L  H RTHTG +P F C 
Sbjct: 6   SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCS 51

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 122 KLFDCHI--CGKTVVTEKNYKKHMQLHSDDKPFECQF--CRKAFKLKYYLTLHLRTH 174
           +   C    CGKT     + K H + H+ +KPF C +  C + F     L+ H RTH
Sbjct: 16  RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTH 468
                T  +PF CP+C ++F    ++ LH + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGV 177
             +  +  KPF+C  C ++F    +L LH + H  V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	488
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.98
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.85
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.84
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.84
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.83
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.83
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.82
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.77
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.73
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.73
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.73
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.72
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.71
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.7
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.68
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.68
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.68
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.67
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.67
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.67
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.66
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.66
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.65
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.64
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.63
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.63
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.63
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.62
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.62
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.62
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.61
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.6
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.59
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.58
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.56
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.56
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.55
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.54
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.54
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.54
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.49
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.49
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.48
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.48
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.47
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.45
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.42
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.41
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.4
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.39
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.39
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.37
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.36
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.35
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.35
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.34
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.34
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.32
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.32
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.3
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.3
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.29
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.29
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.28
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.28
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.27
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.26
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.26
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.26
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.26
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.24
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.23
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.23
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.21
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.21
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.19
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.18
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.18
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.18
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.17
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.16
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.15
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.13
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.1
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.01
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.95
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.91
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.9
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.9
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.89
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.87
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.84
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.83
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.77
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.72
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.72
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.71
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.67
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.65
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.59
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.59
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.58
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.53
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.46
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.45
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.44
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.44
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.43
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.42
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.42
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.41
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.41
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.78
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.4
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.4
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.76
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.39
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.39
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.38
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.38
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.38
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.37
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.37
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.36
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.36
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.36
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.35
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.34
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.69
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.33
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.31
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.3
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.63
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.63
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.29
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.27
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.22
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.42
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.99
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.98
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.52
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.52
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.45
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.39
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.85
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.55
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.54
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.89
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.75
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.94
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.18
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	92.45
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.63
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.06
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	89.24
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.96
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	84.82
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.71
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.43
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	82.96
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	82.37
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.37

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=5.8e-41  Score=294.44  Aligned_cols=184  Identities=30%  Similarity=0.576  Sum_probs=142.2

Q ss_pred             HHHHHHHHhhhccCceeecccccccccCHHHHHhHHhhhccCCceeecCCcccCChhHHHHHHHhhccCCCcccCCCCCC
Q psy16834        261 KEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGY  340 (488)
Q Consensus       261 ~~~L~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~  340 (488)
                      ...|..|++.+.++++|.|++|++.|.+...|..|+++|.+++                            +|.|++||+
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----------------------------~~~C~~C~~   57 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEK----------------------------PYKCPECGK   57 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---C----------------------------CEECTTTCC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCC----------------------------CccCCCcCc
Confidence            4568889999999999999999999999999999988877654                            457888999


Q ss_pred             ccCChHHHHHHHHhhcCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccc
Q psy16834        341 GCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQC  420 (488)
Q Consensus       341 ~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C  420 (488)
                      .|.+...|..|+..++++++|.|++|++.|.+..+|..|++ .|.++++|.|++||+.|.+.+.|..|++.|++++||+|
T Consensus        58 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  136 (190)
T 2i13_A           58 SFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKC  136 (190)
T ss_dssp             EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             hhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeEC
Confidence            99999999999999999999999999999999999999987 57888999999999999999999999999999999999


Q ss_pred             cccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        421 HICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       421 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      ++|++.|.++..|..|+++|+|++||.|++|+++|.++.+|..|+++|+|++|
T Consensus       137 ~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          137 PECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             CCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999999999999999999999999999987

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2e-38  Score=278.20  Aligned_cols=173  Identities=31%  Similarity=0.557  Sum_probs=144.0

Q ss_pred             ccCCCCCcchHHhhcCHHHHHHHHhhhccCceeecccccccccCHHHHHhHHhhhccCCceeecCCcccCChhHHHHHHH
Q psy16834        245 EREKVQCPYCAKFLSRKEKLNRHIRTVHTDVNYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVR  324 (488)
Q Consensus       245 ~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~C~~~~~~~~~l~~H~~  324 (488)
                      +.++|.|++|++.|.+...|..|+++|+++++|.|++||+.|.+...|..|+++|.++++                    
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------   77 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP--------------------   77 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCC--------------------
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCC--------------------
Confidence            356799999999999999999999999999999999999999999999999999877654                    


Q ss_pred             hhccCCCcccCCCCCCccCChHHHHHHHHhhcCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchH
Q psy16834        325 RTHLKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGR  404 (488)
Q Consensus       325 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~  404 (488)
                              |.|++|++.|.+...|..|+..++++++|.|++|++.|.+...|..|++ .|.++++|.|++||+.|.+.+.
T Consensus        78 --------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~  148 (190)
T 2i13_A           78 --------YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDN  148 (190)
T ss_dssp             --------EECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHH
T ss_pred             --------ccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-HhCCCCCeECCCCCcccCCHHH
Confidence                    5688999999999999999999999999999999999999999999997 5889999999999999999999


Q ss_pred             HHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCc
Q psy16834        405 LNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPF  446 (488)
Q Consensus       405 L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  446 (488)
                      |..|+++|++++||.|++|++.|.++..|+.|+++|+|++||
T Consensus       149 L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          149 LHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            999999999999999999999999999999999999999987

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=2.9e-34  Score=251.69  Aligned_cols=167  Identities=23%  Similarity=0.440  Sum_probs=136.3

Q ss_pred             Cceeec--ccccccccCHHHHHhHHhhhccCCceeecCCcccCChhHHHHHHHhhccCCCcccC--CCCCCccCChHHHH
Q psy16834        274 DVNYKC--EICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLC--PICGYGCFRNAELE  349 (488)
Q Consensus       274 ~~~~~C--~~C~~~f~~~~~l~~H~~~H~~~~~~~C~C~~~~~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~  349 (488)
                      .++|.|  +.||+.|.+...|..|+++|.++++                            |.|  ++||+.|.+...|.
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~----------------------------~~C~~~~C~~~f~~~~~l~   61 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKP----------------------------FPCKEEGCEKGFTSLHHLT   61 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCS----------------------------SCCSSTTCCCCCSSHHHHH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCC----------------------------ccCCCCCCChhhCCHHHHH
Confidence            455666  4666666666666666666655443                            345  56677777777777


Q ss_pred             HHHHhhcCCCccccc--cccccccChhHHHHHHhhhc-CCCCCccC--CccCCcCCCchHHHhhhhhhccCCcccccc--
Q psy16834        350 EHFISAHSADRFKCV--FCEKSFARNCNLKLHIRRYH-DKSDNTEC--PLCGKSFPSRGRLNEHLIQVHPAQKHQCHI--  422 (488)
Q Consensus       350 ~H~~~~~~~~~~~C~--~C~k~F~~~~~l~~H~~~~H-~~~~~~~C--~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~--  422 (488)
                      .|+..++++++|.|+  .|++.|.+..+|..|+++.| .++++|.|  ++||+.|.+.+.|..|+++|++++||+|++  
T Consensus        62 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~  141 (190)
T 1tf6_A           62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG  141 (190)
T ss_dssp             HHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSS
T ss_pred             HHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCC
Confidence            777767777788888  89999999999999986677 57889999  889999999999999999999999999988  


Q ss_pred             cccccCChHHHHHHHHhhcCCCCcCCcc---hhhccCChhhHhccccccccC
Q psy16834        423 CNKIVVSEKTLKKHLLLHTNSEPFHCPE---CGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       423 C~k~f~~~~~L~~H~~~H~~~~~~~C~~---C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |+++|.++..|..|+++|+|   |.|++   |++.|.+...|..|+++|+|+
T Consensus       142 C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          142 CDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            99999999999999999998   99999   999999999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.98  E-value=4.4e-32  Score=237.78  Aligned_cols=167  Identities=25%  Similarity=0.446  Sum_probs=144.0

Q ss_pred             ccCCCCC--cchHHhhcCHHHHHHHHhhhccCceeec--ccccccccCHHHHHhHHhhhccCCceeecCCcccCChhHHH
Q psy16834        245 EREKVQC--PYCAKFLSRKEKLNRHIRTVHTDVNYKC--EICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLT  320 (488)
Q Consensus       245 ~~~~~~C--~~C~~~f~~~~~L~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~H~~~~~~~C~C~~~~~~~~~l~  320 (488)
                      ..++|.|  +.|++.|.+...|..|+++|+++++|.|  ++|++.|.+...|..|+++|.++++|.              
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~--------------   74 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT--------------   74 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEE--------------
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCcee--------------
Confidence            4578999  7899999999999999999999999999  899999999999999999998876654              


Q ss_pred             HHHHhhccCCCcccCC--CCCCccCChHHHHHHHHhhc--CCCcccc--ccccccccChhHHHHHHhhhcCCCCCccCCc
Q psy16834        321 EHVRRTHLKDYKVLCP--ICGYGCFRNAELEEHFISAH--SADRFKC--VFCEKSFARNCNLKLHIRRYHDKSDNTECPL  394 (488)
Q Consensus       321 ~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~--~~~~~~C--~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~  394 (488)
                                    |+  +||+.|.+...|..|+...|  +.++|.|  ++|++.|.+.++|..|++ .|.++++|.|++
T Consensus        75 --------------C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~  139 (190)
T 1tf6_A           75 --------------CDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPH  139 (190)
T ss_dssp             --------------CCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG-GGSSSCSSBCCS
T ss_pred             --------------CCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH-HhCCCCCccCCC
Confidence                          55  67777777777777774444  3668999  889999999999999986 588899999987


Q ss_pred             --cCCcCCCchHHHhhhhhhccCCcccccc---cccccCChHHHHHHHHhhcCC
Q psy16834        395 --CGKSFPSRGRLNEHLIQVHPAQKHQCHI---CNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       395 --C~k~F~~~~~L~~H~~~~h~~~~~~C~~---C~k~f~~~~~L~~H~~~H~~~  443 (488)
                        ||++|.+.+.|..|+++|++   |.|++   |++.|.+...|..|+++|+||
T Consensus       140 ~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          140 EGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             SSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence              99999999999999988766   89999   999999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=1.1e-29  Score=214.91  Aligned_cols=140  Identities=22%  Similarity=0.398  Sum_probs=127.8

Q ss_pred             CCcccCCCCCCccCChHHHHHHHH---hhcCCCcccccc-----ccccccChhHHHHHHhhhcCCCCCccCCc--cCCcC
Q psy16834        330 DYKVLCPICGYGCFRNAELEEHFI---SAHSADRFKCVF-----CEKSFARNCNLKLHIRRYHDKSDNTECPL--CGKSF  399 (488)
Q Consensus       330 ~~~~~C~~C~~~f~~~~~l~~H~~---~~~~~~~~~C~~-----C~k~F~~~~~l~~H~~~~H~~~~~~~C~~--C~k~F  399 (488)
                      |.++.|++||+.|.+...|..|+.   .+.+.++|.|++     |++.|.+...|..|++ .|.++++|.|++  ||+.|
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f   79 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSY   79 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTH-HHHCCCCCCCCSTTCCCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHH-hcCCCCCccCCCCCCCCcc
Confidence            457889999999999999999988   455678888875     3499999999999987 588899999986  99999


Q ss_pred             CCchHHHhhhhhhccCCcccccc--cccccCChHHHHHHH-HhhcCCCCcCCcc--hhhccCChhhHhcccccccc
Q psy16834        400 PSRGRLNEHLIQVHPAQKHQCHI--CNKIVVSEKTLKKHL-LLHTNSEPFHCPE--CGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       400 ~~~~~L~~H~~~~h~~~~~~C~~--C~k~f~~~~~L~~H~-~~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~  470 (488)
                      .+...|..|++.|++++||.|++  |++.|.++..|..|+ ++|++++||.|++  |+++|.++++|..|+++|+|
T Consensus        80 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           80 SRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             SSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            99999999999999999999999  999999999999999 8999999999998  99999999999999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=3.9e-28  Score=205.31  Aligned_cols=144  Identities=25%  Similarity=0.436  Sum_probs=125.5

Q ss_pred             CceeecccccccccCHHHHHhHHh---hhccCCceeec-CCcccCChhHHHHHHHhhccCCCcccCCCCCCccCChHHHH
Q psy16834        274 DVNYKCEICGEEFLSKTRYNRHVV---THEEKQKFECE-CGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNAELE  349 (488)
Q Consensus       274 ~~~~~C~~C~~~f~~~~~l~~H~~---~H~~~~~~~C~-C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~  349 (488)
                      +.+|.|++|++.|.+...|..|++   +|.++++|.|. |                        .|+.|++.|.+...|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c------------------------~C~~c~~~f~~~~~l~   56 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG------------------------GCSRELRPFKAQYMLV   56 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBT------------------------TCTTTTCCCSSHHHHH
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCC------------------------CccchhhhhhhHHHHH
Confidence            346888888888888888888887   56777777663 2                        2677789999999999


Q ss_pred             HHHHhhcCCCcccccc--ccccccChhHHHHHHhhhcCCCCCccCCc--cCCcCCCchHHHhhh-hhhccCCcccccc--
Q psy16834        350 EHFISAHSADRFKCVF--CEKSFARNCNLKLHIRRYHDKSDNTECPL--CGKSFPSRGRLNEHL-IQVHPAQKHQCHI--  422 (488)
Q Consensus       350 ~H~~~~~~~~~~~C~~--C~k~F~~~~~l~~H~~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~-~~~h~~~~~~C~~--  422 (488)
                      .|+..++++++|.|++  |+++|.+...|..|++ .|.++++|.|++  ||+.|.+.+.|..|+ +.|.+++||+|++  
T Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~  135 (155)
T 2gli_A           57 VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPG  135 (155)
T ss_dssp             HHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHH-HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTT
T ss_pred             HHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHH-HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCC
Confidence            9999999999999985  9999999999999987 588999999998  999999999999998 6777888999998  


Q ss_pred             cccccCChHHHHHHHHhhcC
Q psy16834        423 CNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       423 C~k~f~~~~~L~~H~~~H~~  442 (488)
                      |++.|.++..|..|+++|+|
T Consensus       136 C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          136 CTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TCCEESSHHHHHHHHHHSCC
T ss_pred             CccccCCHHHHHHHHHhhcC
Confidence            99999999999999999876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=1e-28  Score=200.85  Aligned_cols=110  Identities=21%  Similarity=0.385  Sum_probs=90.7

Q ss_pred             HHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCC
Q psy16834        378 LHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKF  457 (488)
Q Consensus       378 ~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~  457 (488)
                      .|...+|+|+++|+|++||++|.+.+.|..|+++|.+++||+|++|+++|.++..|..|+++|+|++||.|++||++|.+
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            34455788888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             hhhHhccccccccCcC-----ccccccCccccccC
Q psy16834        458 KRYVTLHMRTHTGNWP-----TFVCKICNATISSE  487 (488)
Q Consensus       458 ~~~L~~H~~~H~~~~~-----~~~C~~C~k~f~~~  487 (488)
                      +++|..|+++|+++.|     .|.|.+|++.|...
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            8888888888876543     38888888888764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.94  E-value=6.3e-27  Score=197.76  Aligned_cols=121  Identities=26%  Similarity=0.422  Sum_probs=112.8

Q ss_pred             CCCccccccccccccChhHHHHHHhhhcCCCCC--------ccCCccCCcCCCchHHHhhhhhhccCCcccccc--cccc
Q psy16834        357 SADRFKCVFCEKSFARNCNLKLHIRRYHDKSDN--------TECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHI--CNKI  426 (488)
Q Consensus       357 ~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~--------~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~--C~k~  426 (488)
                      ...+|.|++|++.|.+..+|..|++.+|.+..+        |.|++|++.|.+...|..|++.|+++++|.|++  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            356789999999999999999999876877765        899999999999999999999999999999998  9999


Q ss_pred             cCChHHHHHHHHhhcCCCCcCCcc--hhhccCChhhHhccccccccCcCccccc
Q psy16834        427 VVSEKTLKKHLLLHTNSEPFHCPE--CGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       427 f~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |.+...|..|+++|++++||.|++  |+++|.+...|..|+++|+|++| |.|.
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS-GPSS  154 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCC-SCSC
T ss_pred             cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCC-CCCC
Confidence            999999999999999999999997  99999999999999999999998 9985

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=4.5e-26  Score=184.80  Aligned_cols=116  Identities=29%  Similarity=0.590  Sum_probs=96.0

Q ss_pred             cCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhh---hccCCcccccccccccCChHH
Q psy16834        356 HSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQ---VHPAQKHQCHICNKIVVSEKT  432 (488)
Q Consensus       356 ~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~---~h~~~~~~C~~C~k~f~~~~~  432 (488)
                      .+.++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|++.   +.++++|.|++|++.|.+...
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHH-HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHH-hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            34667888888888888888888876 47777888888888888888888888875   346678999999999999999


Q ss_pred             HHHHHHhhcCCCCcCCcchhhccCChhhHhcccc-ccccCc
Q psy16834        433 LKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMR-THTGNW  472 (488)
Q Consensus       433 L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~-~H~~~~  472 (488)
                      |..|+++|++++||.|++|+++|.++..|..|++ .|.|+.
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999999999999987 466653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.93  E-value=2.4e-26  Score=186.41  Aligned_cols=114  Identities=27%  Similarity=0.562  Sum_probs=98.9

Q ss_pred             CCccccc--cccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccc--cccccCChHHH
Q psy16834        358 ADRFKCV--FCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHI--CNKIVVSEKTL  433 (488)
Q Consensus       358 ~~~~~C~--~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~--C~k~f~~~~~L  433 (488)
                      +++|.|+  .|++.|.+...|..|++ .| ++++|.|++||+.|.+.+.|..|++.|+++++|.|++  |++.|.+...|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLH-TH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHG-GG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHH-Hc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            4678898  89999999999999987 46 7889999999999999999999999988899999986  99999999999


Q ss_pred             HHHHHhhcCCCCcCCc--chhhccCChhhHhccccccccCcC
Q psy16834        434 KKHLLLHTNSEPFHCP--ECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       434 ~~H~~~H~~~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      ..|+++|+|++||.|+  .|+++|.+.++|..|+++|+++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            9999999999999996  499999999999999999999876

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=2.9e-26  Score=184.51  Aligned_cols=112  Identities=27%  Similarity=0.585  Sum_probs=102.0

Q ss_pred             cCCCcccccc--ccccccChhHHHHHHhhhcCCCCCccCC--ccCCcCCCchHHHhhhhhhccCCcccccccccccCChH
Q psy16834        356 HSADRFKCVF--CEKSFARNCNLKLHIRRYHDKSDNTECP--LCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEK  431 (488)
Q Consensus       356 ~~~~~~~C~~--C~k~F~~~~~l~~H~~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~  431 (488)
                      .++++|.|++  |++.|.+...|..|++ .|.++++|.|+  .||+.|.+...|..|++.|+++++|+|++|++.|.+..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHH-hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            3567899987  9999999999999987 57788899998  79999999999999999988999999999999999999


Q ss_pred             HHHHHHHhhcCCCCcCC--cchhhccCChhhHhcccccc
Q psy16834        432 TLKKHLLLHTNSEPFHC--PECGKAFKFKRYVTLHMRTH  468 (488)
Q Consensus       432 ~L~~H~~~H~~~~~~~C--~~C~~~F~~~~~L~~H~~~H  468 (488)
                      .|..|+++|+|++||.|  ++||++|.+++.|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=7.1e-27  Score=189.95  Aligned_cols=111  Identities=17%  Similarity=0.353  Sum_probs=87.4

Q ss_pred             hhcCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHH
Q psy16834        354 SAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTL  433 (488)
Q Consensus       354 ~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L  433 (488)
                      .+.|+++|.|++||++|.+.++|..|++ .|++++||.|++||++|.+.+.|..|+++|.+++||.|++||++|.++..|
T Consensus        16 ~h~Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           16 IVDGRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EETTEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             ecCCCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            3556777888888888888888888876 577888888888888888888888888887788888888888888888888


Q ss_pred             HHHHHhhcCCC------CcCCcchhhccCChhhHhccccccccCc
Q psy16834        434 KKHLLLHTNSE------PFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       434 ~~H~~~H~~~~------~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      ..|+++|++++      +|+|.+|++.|.       |+++|++++
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~~-------~~~~h~~ek  132 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQI-------RQYAYLSDR  132 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSCC-------CCCHHHHCC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchhh-------hcccccccC
Confidence            88888877654      588888888775       556666654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=7.4e-25  Score=177.61  Aligned_cols=117  Identities=24%  Similarity=0.456  Sum_probs=110.1

Q ss_pred             cCCCcccCCCCCCccCChHHHHHHHHhhcCCCccccccccccccChhHHHHHHhhh--cCCCCCccCCccCCcCCCchHH
Q psy16834        328 LKDYKVLCPICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRY--HDKSDNTECPLCGKSFPSRGRL  405 (488)
Q Consensus       328 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~--H~~~~~~~C~~C~k~F~~~~~L  405 (488)
                      .++.+|.|++|++.|.+...|..|+..++++++|.|++|++.|.+...|..|++.+  |.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            45678999999999999999999999999999999999999999999999999863  6788999999999999999999


Q ss_pred             HhhhhhhccCCcccccccccccCChHHHHHHHH-hhcCCC
Q psy16834        406 NEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLL-LHTNSE  444 (488)
Q Consensus       406 ~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~  444 (488)
                      ..|++.|++++||.|++|++.|.++..|+.|++ .|+|+.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            999999999999999999999999999999997 688764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=7.6e-25  Score=184.93  Aligned_cols=122  Identities=24%  Similarity=0.353  Sum_probs=112.4

Q ss_pred             ccCCCcccCCCCCCccCChHHHHHHHHhhcCC-Cc--------cccccccccccChhHHHHHHhhhcCCCCCccCCc--c
Q psy16834        327 HLKDYKVLCPICGYGCFRNAELEEHFISAHSA-DR--------FKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPL--C  395 (488)
Q Consensus       327 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~-~~--------~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~--C  395 (488)
                      ...+.+|.|++|++.|.+...|..|+..+|.. .+        |.|++|++.|.+...|..|++ .|.++++|.|++  |
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTH-HHHCCCSEECSCTTT
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHH-hcCCCCcccCCcCCC
Confidence            34567899999999999999999999985543 33        899999999999999999997 588999999998  9


Q ss_pred             CCcCCCchHHHhhhhhhccCCcccccc--cccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        396 GKSFPSRGRLNEHLIQVHPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       396 ~k~F~~~~~L~~H~~~~h~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      ++.|.+...|..|++.|++++||.|++  |++.|.+...|..|+++|+|++||.|.
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999999999999999998  999999999999999999999999995

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=1.1e-24  Score=176.64  Aligned_cols=116  Identities=25%  Similarity=0.443  Sum_probs=103.0

Q ss_pred             CCcccCC--CCCCccCChHHHHHHHHhhcCCCccccccccccccChhHHHHHHhhhcCCCCCccCCc--cCCcCCCchHH
Q psy16834        330 DYKVLCP--ICGYGCFRNAELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPL--CGKSFPSRGRL  405 (488)
Q Consensus       330 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~--C~k~F~~~~~L  405 (488)
                      +.+|.|+  +||+.|.+...|..|+..+ +.++|.|++|++.|.+...|..|++ .|.++++|.|++  ||+.|.+.+.|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGG-GTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCeeCCCCCCcCccCCHHHH
Confidence            4678999  8999999999999999876 8899999999999999999999987 688999999986  99999999999


Q ss_pred             HhhhhhhccCCccccc--ccccccCChHHHHHHHHhhcCCCCcC
Q psy16834        406 NEHLIQVHPAQKHQCH--ICNKIVVSEKTLKKHLLLHTNSEPFH  447 (488)
Q Consensus       406 ~~H~~~~h~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~  447 (488)
                      ..|++.|+++++|.|+  .|++.|.++..|..|+++|+++++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            9999999999999996  59999999999999999999999874

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=4.6e-24  Score=171.51  Aligned_cols=112  Identities=23%  Similarity=0.471  Sum_probs=106.4

Q ss_pred             cCCCcccCCC--CCCccCChHHHHHHHHhhcCCCccccc--cccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCch
Q psy16834        328 LKDYKVLCPI--CGYGCFRNAELEEHFISAHSADRFKCV--FCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRG  403 (488)
Q Consensus       328 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~  403 (488)
                      +++.+|.|++  ||+.|.+...|..|+..++++++|.|+  .|++.|.+...|..|++ .|.++++|.|++||+.|.+.+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCccCchhCCHH
Confidence            4567899997  999999999999999999999999999  79999999999999997 588899999999999999999


Q ss_pred             HHHhhhhhhccCCcccc--cccccccCChHHHHHHHHhh
Q psy16834        404 RLNEHLIQVHPAQKHQC--HICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       404 ~L~~H~~~~h~~~~~~C--~~C~k~f~~~~~L~~H~~~H  440 (488)
                      .|..|++.|++++||+|  ++|++.|.++..|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=7.7e-22  Score=154.85  Aligned_cols=91  Identities=26%  Similarity=0.532  Sum_probs=62.2

Q ss_pred             CCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcc
Q psy16834        385 DKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLH  464 (488)
Q Consensus       385 ~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H  464 (488)
                      .++++|.|++|++.|.+...|..|++.|+++++|+|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            34556666666666666666666666666666677777777777777777777777777777777777777777777777


Q ss_pred             ccccccCcCccc
Q psy16834        465 MRTHTGNWPTFV  476 (488)
Q Consensus       465 ~~~H~~~~~~~~  476 (488)
                      +++|+++.| |.
T Consensus        93 ~~~H~~~~~-~~  103 (106)
T 2ee8_A           93 KTLHMQTSS-PT  103 (106)
T ss_dssp             HHHTTSCCC-CC
T ss_pred             HHHhCCCCC-Cc
Confidence            777776665 54

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=6.3e-22  Score=152.30  Aligned_cols=90  Identities=29%  Similarity=0.632  Sum_probs=81.2

Q ss_pred             cCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhc
Q psy16834        384 HDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTL  463 (488)
Q Consensus       384 H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~  463 (488)
                      +.++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            46778899999999999999999999888888899999999999999999999999999999999999999999999999


Q ss_pred             cccccccCcC
Q psy16834        464 HMRTHTGNWP  473 (488)
Q Consensus       464 H~~~H~~~~~  473 (488)
                      |+++|+|+.+
T Consensus        83 H~~~h~~~~~   92 (96)
T 2dmd_A           83 HLRSHTGDSG   92 (96)
T ss_dssp             HHTTCCSCCC
T ss_pred             HHHHhcCCCC
Confidence            9999998865

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.84  E-value=6.2e-22  Score=150.38  Aligned_cols=87  Identities=26%  Similarity=0.541  Sum_probs=72.4

Q ss_pred             CCCCccCC--ccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhc
Q psy16834        386 KSDNTECP--LCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTL  463 (488)
Q Consensus       386 ~~~~~~C~--~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~  463 (488)
                      ++++|.|+  .||+.|.+.+.|..|++.|+++++|.|++|++.|.+...|+.|+++|++++||.|++|+++|.+.+.|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            35778887  5888888888888888888888888888888888888888899888888889999999999999999999


Q ss_pred             cccccccCc
Q psy16834        464 HMRTHTGNW  472 (488)
Q Consensus       464 H~~~H~~~~  472 (488)
                      |+++|+|++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999888874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.84  E-value=9.1e-22  Score=146.58  Aligned_cols=82  Identities=35%  Similarity=0.726  Sum_probs=65.9

Q ss_pred             CccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcccccc
Q psy16834        389 NTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTH  468 (488)
Q Consensus       389 ~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H  468 (488)
                      ||.|++||+.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|++++||.|++|+++|.+.++|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            46777777777777777777777777778888888888888888888888888888888888888888888888888887


Q ss_pred             cc
Q psy16834        469 TG  470 (488)
Q Consensus       469 ~~  470 (488)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            65

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=2.2e-21  Score=152.38  Aligned_cols=92  Identities=18%  Similarity=0.245  Sum_probs=72.3

Q ss_pred             hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHh
Q psy16834        383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVT  462 (488)
Q Consensus       383 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~  462 (488)
                      .|+++++|.|++|++.|.+...|..|++.|  .++|+|++|++.|.+...|+.|++ |++++||.|++|++.|.+...|.
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            467777888888888888888888887775  367888888888888888888885 88888888888888888888888


Q ss_pred             cccc-ccccCcCccccc
Q psy16834        463 LHMR-THTGNWPTFVCK  478 (488)
Q Consensus       463 ~H~~-~H~~~~~~~~C~  478 (488)
                      .|++ +|++++| |.|.
T Consensus        87 ~H~~~~H~~~~~-~~~~  102 (107)
T 1wjp_A           87 RHQVEVHNQNNM-APTS  102 (107)
T ss_dssp             HHHHHTSCCCCC-CCCC
T ss_pred             HHHHHHcCCCCC-CCCC
Confidence            8886 7777766 7664

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=1.5e-22  Score=161.38  Aligned_cols=100  Identities=15%  Similarity=0.178  Sum_probs=75.6

Q ss_pred             hhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhh--hccCCcc-ccccccccc--CChHHHHHHHHhhcCCCCcC
Q psy16834        373 NCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQ--VHPAQKH-QCHICNKIV--VSEKTLKKHLLLHTNSEPFH  447 (488)
Q Consensus       373 ~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~--~h~~~~~-~C~~C~k~f--~~~~~L~~H~~~H~~~~~~~  447 (488)
                      .+.|..|++ .|+++++|.|++||+.|.+...|..|++.  +.+.+++ .|++|++.|  .++..|..|+++|++++||.
T Consensus         4 ~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            4 GSSGKLYGS-IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCC-CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             chhhhhhee-eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            345667764 57777778888888888888888888776  5555554 488888877  77888888888888888888


Q ss_pred             CcchhhccCChhhHhccccccccCcC
Q psy16834        448 CPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       448 C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      |++|+++|.+++.|..|+++|+....
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCccc
Confidence            88888888888888888888766543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.83  E-value=1.5e-20  Score=147.48  Aligned_cols=93  Identities=26%  Similarity=0.538  Sum_probs=85.6

Q ss_pred             cCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHH
Q psy16834        356 HSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKK  435 (488)
Q Consensus       356 ~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~  435 (488)
                      ...++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHH-HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            34678999999999999999999987 58888999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCcCCc
Q psy16834        436 HLLLHTNSEPFHCP  449 (488)
Q Consensus       436 H~~~H~~~~~~~C~  449 (488)
                      |+++|++++||...
T Consensus        92 H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           92 HKTLHMQTSSPTAA  105 (106)
T ss_dssp             HHHHTTSCCCCCCC
T ss_pred             HHHHhCCCCCCcCC
Confidence            99999999999753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.82  E-value=4.3e-21  Score=131.22  Aligned_cols=59  Identities=29%  Similarity=0.576  Sum_probs=54.8

Q ss_pred             cCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCc
Q psy16834        414 PAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       414 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      .++||+|++||++|.+.+.|..|+++|+|++||.|++||++|.++++|..|+++|+|+.
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            36899999999999999999999999999999999999999999999999999999874

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.3e-20  Score=144.64  Aligned_cols=87  Identities=26%  Similarity=0.571  Sum_probs=70.9

Q ss_pred             CCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCC--CCcCCcchhhccCChhhHh
Q psy16834        385 DKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNS--EPFHCPECGKAFKFKRYVT  462 (488)
Q Consensus       385 ~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~--~~~~C~~C~~~F~~~~~L~  462 (488)
                      +++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|+++  +||.|++|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            45677888888888888888888888777778888888888888888888888888886  8888888888888888888


Q ss_pred             cccc-ccccC
Q psy16834        463 LHMR-THTGN  471 (488)
Q Consensus       463 ~H~~-~H~~~  471 (488)
                      .|++ +|.++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            8885 67765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=3.1e-20  Score=142.80  Aligned_cols=91  Identities=29%  Similarity=0.470  Sum_probs=83.9

Q ss_pred             cCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHH
Q psy16834        356 HSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKK  435 (488)
Q Consensus       356 ~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~  435 (488)
                      .++++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            45788999999999999999999987 68889999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCcC
Q psy16834        436 HLLLHTNSEPFH  447 (488)
Q Consensus       436 H~~~H~~~~~~~  447 (488)
                      |+++|+|+++..
T Consensus        83 H~~~h~~~~~p~   94 (96)
T 2dmd_A           83 HLRSHTGDSGPS   94 (96)
T ss_dssp             HHTTCCSCCCCC
T ss_pred             HHHHhcCCCCCC
Confidence            999999987643

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=2.6e-20  Score=141.30  Aligned_cols=87  Identities=22%  Similarity=0.539  Sum_probs=77.4

Q ss_pred             CCccccc--cccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHH
Q psy16834        358 ADRFKCV--FCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKK  435 (488)
Q Consensus       358 ~~~~~C~--~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~  435 (488)
                      +++|.|+  .|++.|.+...|..|++ .|.++++|.|++||+.|.+.+.|..|++.|++++||.|++|++.|.++..|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            5789998  59999999999999987 57888999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCC
Q psy16834        436 HLLLHTNSEP  445 (488)
Q Consensus       436 H~~~H~~~~~  445 (488)
                      |+++|+|+++
T Consensus        81 H~~~H~~~k~   90 (90)
T 1a1h_A           81 HTKIHLRQKD   90 (90)
T ss_dssp             HHGGGGC---
T ss_pred             HHHHhcccCC
Confidence            9999999863

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.4e-20  Score=146.40  Aligned_cols=92  Identities=18%  Similarity=0.338  Sum_probs=83.7

Q ss_pred             hhcCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHH
Q psy16834        354 SAHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTL  433 (488)
Q Consensus       354 ~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L  433 (488)
                      .+.++++|.|++|++.|.....|..|++. |  +++|.|++|++.|.....|..|++ |++++||+|++|++.|.+...|
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERL-C--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHH-H--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHH-C--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            45677889999999999999999999875 5  478999999999999999999995 8889999999999999999999


Q ss_pred             HHHHH-hhcCCCCcCCc
Q psy16834        434 KKHLL-LHTNSEPFHCP  449 (488)
Q Consensus       434 ~~H~~-~H~~~~~~~C~  449 (488)
                      +.|++ +|++++||.|.
T Consensus        86 ~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCC
Confidence            99997 99999999885

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.5e-20  Score=148.48  Aligned_cols=88  Identities=24%  Similarity=0.492  Sum_probs=78.1

Q ss_pred             hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHh
Q psy16834        383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVT  462 (488)
Q Consensus       383 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~  462 (488)
                      .|+++++|.| +|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            4778888888 888888888888888888888889999999999999999999999999999999999999999999999


Q ss_pred             ccccccccC
Q psy16834        463 LHMRTHTGN  471 (488)
Q Consensus       463 ~H~~~H~~~  471 (488)
                      .|+++|++.
T Consensus        83 ~H~~~~~~~   91 (110)
T 2csh_A           83 RHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHcccc
Confidence            999988764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=4.2e-20  Score=137.49  Aligned_cols=82  Identities=29%  Similarity=0.633  Sum_probs=73.8

Q ss_pred             ccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHh
Q psy16834        360 RFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLL  439 (488)
Q Consensus       360 ~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~  439 (488)
                      ||.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.++..|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            5889999999999999999987 477888999999999999999999999999999999999999999999999999999


Q ss_pred             hcC
Q psy16834        440 HTN  442 (488)
Q Consensus       440 H~~  442 (488)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            986

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=1.2e-20  Score=150.35  Aligned_cols=105  Identities=18%  Similarity=0.265  Sum_probs=90.3

Q ss_pred             HHHHHHHHhhcCCCccccccccccccChhHHHHHHhhh-cCCCCCc-cCCccCCcC--CCchHHHhhhhhhccCCccccc
Q psy16834        346 AELEEHFISAHSADRFKCVFCEKSFARNCNLKLHIRRY-HDKSDNT-ECPLCGKSF--PSRGRLNEHLIQVHPAQKHQCH  421 (488)
Q Consensus       346 ~~l~~H~~~~~~~~~~~C~~C~k~F~~~~~l~~H~~~~-H~~~~~~-~C~~C~k~F--~~~~~L~~H~~~~h~~~~~~C~  421 (488)
                      ..|..|++.++++++|.|++|++.|.+...|..|++.. |.+.+++ .|++|++.|  .....|..|+++|++++||+|+
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            45667777788899999999999999999999998741 5556655 599999999  9999999999999999999999


Q ss_pred             ccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        422 ICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       422 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      +|++.|.++..|.+|+++|........+.
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTTTTCSCCCC
T ss_pred             CCCCccCCHHHHHHHHHHhCCcccCCCCC
Confidence            99999999999999999988877666553

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.78  E-value=1.2e-19  Score=137.28  Aligned_cols=83  Identities=28%  Similarity=0.606  Sum_probs=70.3

Q ss_pred             CCCccCCc--cCCcCCCchHHHhhhhhhccCCccccc--ccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHh
Q psy16834        387 SDNTECPL--CGKSFPSRGRLNEHLIQVHPAQKHQCH--ICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVT  462 (488)
Q Consensus       387 ~~~~~C~~--C~k~F~~~~~L~~H~~~~h~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~  462 (488)
                      ..+|.|++  ||+.|.+...|..|++.|+++++|.|+  .|++.|.+...|..|+++|++++||.|++|+++|...++|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45678887  888888888888888887788888886  58888888888888888898888999999999999999999


Q ss_pred             ccccccc
Q psy16834        463 LHMRTHT  469 (488)
Q Consensus       463 ~H~~~H~  469 (488)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9988874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.77  E-value=1.8e-19  Score=139.56  Aligned_cols=85  Identities=26%  Similarity=0.536  Sum_probs=65.2

Q ss_pred             CCCCccCCc--cCCcCCCchHHHhhhhhhccCCccccc--ccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhH
Q psy16834        386 KSDNTECPL--CGKSFPSRGRLNEHLIQVHPAQKHQCH--ICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYV  461 (488)
Q Consensus       386 ~~~~~~C~~--C~k~F~~~~~L~~H~~~~h~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L  461 (488)
                      ..++|.|++  |++.|.+...|..|++.|+++++|.|+  .|++.|.+...|..|+++|++++||.|++|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            345677775  777777777777777777777778885  5888888888888888888888888888888888888888


Q ss_pred             hcccccccc
Q psy16834        462 TLHMRTHTG  470 (488)
Q Consensus       462 ~~H~~~H~~  470 (488)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            888887764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=5.2e-19  Score=135.53  Aligned_cols=88  Identities=23%  Similarity=0.479  Sum_probs=77.4

Q ss_pred             cCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccC--CcccccccccccCChHHH
Q psy16834        356 HSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPA--QKHQCHICNKIVVSEKTL  433 (488)
Q Consensus       356 ~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~--~~~~C~~C~k~f~~~~~L  433 (488)
                      .++++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|++.|+++  ++|+|++|++.|.++..|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            45678999999999999999999986 588889999999999999999999999988886  899999999999999999


Q ss_pred             HHHHH-hhcCCC
Q psy16834        434 KKHLL-LHTNSE  444 (488)
Q Consensus       434 ~~H~~-~H~~~~  444 (488)
                      ..|++ +|+|+.
T Consensus        82 ~~H~~~~H~~~~   93 (95)
T 2yt9_A           82 NGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHTSCCCS
T ss_pred             HHHHHHhcCCCC
Confidence            99985 788763

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=6.6e-19  Score=120.31  Aligned_cols=58  Identities=22%  Similarity=0.453  Sum_probs=51.2

Q ss_pred             CCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        387 SDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       387 ~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      |+||.|++||++|...+.|..|+++|.+++||+|++||++|.+.+.|.+|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6888888888888888888889888888899999999999999999999999999874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.73  E-value=1.4e-19  Score=136.39  Aligned_cols=83  Identities=13%  Similarity=0.261  Sum_probs=62.8

Q ss_pred             CCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcccc
Q psy16834        387 SDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMR  466 (488)
Q Consensus       387 ~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~  466 (488)
                      ++||.|++||+.|.+.+.|..|++.|++++||.|++|++.|.+...|..|+++|++ .||.|+.|++.|.+..+|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            35677777777777777777777777777777777777777777777777777774 67888888888888888888877


Q ss_pred             cccc
Q psy16834        467 THTG  470 (488)
Q Consensus       467 ~H~~  470 (488)
                      .+++
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6553

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=2.6e-18  Score=135.51  Aligned_cols=86  Identities=23%  Similarity=0.468  Sum_probs=71.4

Q ss_pred             hcCCCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHH
Q psy16834        355 AHSADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLK  434 (488)
Q Consensus       355 ~~~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~  434 (488)
                      +.++++|.| .|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..|++.|+++++|+|++|++.|.+...|.
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            456778888 78888888888888876 5777888888888888888888888888888888888888888888888888


Q ss_pred             HHHHhhcC
Q psy16834        435 KHLLLHTN  442 (488)
Q Consensus       435 ~H~~~H~~  442 (488)
                      .|+++|.+
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            88888753

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.4e-18  Score=128.10  Aligned_cols=70  Identities=29%  Similarity=0.724  Sum_probs=51.0

Q ss_pred             cCCcccccc--cccccCChHHHHHHHH-hhcCCCCcCCcc--hhhccCChhhHhccccccccCcCccccccCcccc
Q psy16834        414 PAQKHQCHI--CNKIVVSEKTLKKHLL-LHTNSEPFHCPE--CGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATI  484 (488)
Q Consensus       414 ~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~k~f  484 (488)
                      ++++|.|+.  |++.|.++..|+.|++ +|++++||.|++  |+++|.++.+|..|+++|++++| |.|++||++|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC-eeCCCCCCCC
Confidence            455677765  7777777777777777 577777777777  77777777777777777777766 7777777776

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.8e-18  Score=129.78  Aligned_cols=79  Identities=16%  Similarity=0.264  Sum_probs=47.5

Q ss_pred             HHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCC----CCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        405 LNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNS----EPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       405 L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |..|+++|.+++||.|++|++.|.+...|..|+++|.++    +||.|++|++.|.+...|..|+++|+++.+ +.|+.|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~~~~~~   81 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG-VEGENS   81 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS-CCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC-cccCCC
Confidence            445555555556666666666666666666666554443    556666666666666666666666666655 666666


Q ss_pred             cccc
Q psy16834        481 NATI  484 (488)
Q Consensus       481 ~k~f  484 (488)
                      |.+|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            6554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.71  E-value=1.2e-17  Score=129.29  Aligned_cols=84  Identities=26%  Similarity=0.528  Sum_probs=75.4

Q ss_pred             CCcccccc--ccccccChhHHHHHHhhhcCCCCCccCC--ccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHH
Q psy16834        358 ADRFKCVF--CEKSFARNCNLKLHIRRYHDKSDNTECP--LCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTL  433 (488)
Q Consensus       358 ~~~~~C~~--C~k~F~~~~~l~~H~~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L  433 (488)
                      .++|.|++  |++.|.....|..|++ .|.++++|.|+  .|++.|.+...|..|++.|++++||+|++|++.|.+...|
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            56789986  9999999999999987 58888999996  6999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcC
Q psy16834        434 KKHLLLHTN  442 (488)
Q Consensus       434 ~~H~~~H~~  442 (488)
                      ..|+++|+|
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=9e-18  Score=126.88  Aligned_cols=83  Identities=24%  Similarity=0.536  Sum_probs=74.9

Q ss_pred             CCcccccc--ccccccChhHHHHHHhhhcCCCCCccCC--ccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHH
Q psy16834        358 ADRFKCVF--CEKSFARNCNLKLHIRRYHDKSDNTECP--LCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTL  433 (488)
Q Consensus       358 ~~~~~C~~--C~k~F~~~~~l~~H~~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L  433 (488)
                      ..+|.|++  |++.|.+...|..|++ .|.++++|.|+  .||+.|.+...|..|++.|++++||+|++|++.|.+...|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            45789998  9999999999999987 58888999997  5999999999999999999999999999999999999999


Q ss_pred             HHHHHhhc
Q psy16834        434 KKHLLLHT  441 (488)
Q Consensus       434 ~~H~~~H~  441 (488)
                      ..|+++|.
T Consensus        82 ~~H~~~H~   89 (89)
T 2wbs_A           82 ALHMKRHF   89 (89)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhhC
Confidence            99999884

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=7.7e-18  Score=124.06  Aligned_cols=72  Identities=29%  Similarity=0.537  Sum_probs=61.5

Q ss_pred             CCCCCccCCc--cCCcCCCchHHHhhhh-hhccCCcccccc--cccccCChHHHHHHHHhhcCCCCcCCcchhhccC
Q psy16834        385 DKSDNTECPL--CGKSFPSRGRLNEHLI-QVHPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFK  456 (488)
Q Consensus       385 ~~~~~~~C~~--C~k~F~~~~~L~~H~~-~~h~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~  456 (488)
                      +++++|.|+.  |++.|.+...|..|++ .|.++++|+|++  |++.|.++..|+.|+++|++++||.|++||++|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4567788876  8888888888888887 577788899988  9999999999999999999999999999999884

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.70  E-value=3.9e-18  Score=127.68  Aligned_cols=78  Identities=23%  Similarity=0.399  Sum_probs=59.9

Q ss_pred             CccC--CccCCcCCCchHHHhhhhhhccCCcccccc--cccccCChHHHHHHHHhhcCCCCcCCcc---hhhccCChhhH
Q psy16834        389 NTEC--PLCGKSFPSRGRLNEHLIQVHPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHCPE---CGKAFKFKRYV  461 (488)
Q Consensus       389 ~~~C--~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~---C~~~F~~~~~L  461 (488)
                      ||.|  ++||+.|.+.+.|..|++.|++++||+|++  |++.|.+...|..|+++|+|   |.|++   |++.|.+.++|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4667  777777777777777777777777777777  88888888888888877777   77877   88888888888


Q ss_pred             hccccccc
Q psy16834        462 TLHMRTHT  469 (488)
Q Consensus       462 ~~H~~~H~  469 (488)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            88877764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=1e-17  Score=125.60  Aligned_cols=80  Identities=19%  Similarity=0.323  Sum_probs=71.6

Q ss_pred             HHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccC----CcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        375 NLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPA----QKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       375 ~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~----~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|.+|++ .|.++++|.|++|++.|.+...|..|++.++..    ++|+|++|++.|.++..|..|+++|++++++.|+.
T Consensus         2 s~~~H~~-~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            2 SSGSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTTCCST-TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             Ccccccc-eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            3567876 688899999999999999999999999887776    68999999999999999999999999999999999


Q ss_pred             hhhcc
Q psy16834        451 CGKAF  455 (488)
Q Consensus       451 C~~~F  455 (488)
                      |+.+|
T Consensus        81 ~~~~~   85 (86)
T 1x6h_A           81 SGPSS   85 (86)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=8.2e-18  Score=123.16  Aligned_cols=65  Identities=34%  Similarity=0.591  Sum_probs=46.4

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      +.++++|+|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++++| |+|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p-~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP-SSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCC-CCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            34556777777777777777777777777777777777777777777777777777777766 665

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.3e-17  Score=124.80  Aligned_cols=80  Identities=19%  Similarity=0.303  Sum_probs=69.9

Q ss_pred             CCcCCCchHHHhhhhhhccCCccccccccccc-CChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcc-ccccccCcC
Q psy16834        396 GKSFPSRGRLNEHLIQVHPAQKHQCHICNKIV-VSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLH-MRTHTGNWP  473 (488)
Q Consensus       396 ~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f-~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H-~~~H~~~~~  473 (488)
                      ..+|...+.|..|++.++++++|.|++|++.| .++..|+.|+++| +++||.|++||++|.+++.|..| +++|+++..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            45778888899999888889999999999999 8999999999999 99999999999999999999999 888987633


Q ss_pred             cccc
Q psy16834        474 TFVC  477 (488)
Q Consensus       474 ~~~C  477 (488)
                       |.+
T Consensus        92 -~~~   94 (96)
T 2ctd_A           92 -GPS   94 (96)
T ss_dssp             -CSC
T ss_pred             -CCC
Confidence             543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.67  E-value=2.6e-18  Score=139.75  Aligned_cols=69  Identities=20%  Similarity=0.304  Sum_probs=57.1

Q ss_pred             CCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        400 PSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       400 ~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      ...+.|..|+ .|++++||+|++|++.|.+...|..|+++|  ++||.|++||++|.++++|..|+++|+|+
T Consensus        58 ~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           58 DESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            4556666666 567788888888888888888888888888  78888888888888888888888888876

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.67  E-value=6e-18  Score=127.41  Aligned_cols=81  Identities=21%  Similarity=0.405  Sum_probs=71.1

Q ss_pred             CCccccccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHH
Q psy16834        358 ADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHL  437 (488)
Q Consensus       358 ~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~  437 (488)
                      ++||.|++|++.|.+.+.|..|++ .|.++++|.|++||+.|.+.+.|..|++.+|+ .+|.|+.|++.|.+...|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            468899999999999999999987 58888899999999999999999999988774 7899999999999999999998


Q ss_pred             Hhh
Q psy16834        438 LLH  440 (488)
Q Consensus       438 ~~H  440 (488)
                      +.+
T Consensus        79 ~~~   81 (88)
T 1llm_C           79 ARL   81 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2e-17  Score=126.41  Aligned_cols=66  Identities=18%  Similarity=0.285  Sum_probs=36.7

Q ss_pred             cCCcccccccccccCChHHHHHHHH-hh---cCCCCcCCcchhhccCChhhHhcc-ccccccCcCccccccC
Q psy16834        414 PAQKHQCHICNKIVVSEKTLKKHLL-LH---TNSEPFHCPECGKAFKFKRYVTLH-MRTHTGNWPTFVCKIC  480 (488)
Q Consensus       414 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H---~~~~~~~C~~C~~~F~~~~~L~~H-~~~H~~~~~~~~C~~C  480 (488)
                      +++||.|++|++.|.++..|+.|++ +|   ++++||.|++||++|.+++.|..| +++|+|++| |.|.++
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekp-y~C~~~   85 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEEN-FKLTMV   85 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCC-EEEEEC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCC-eeCCcc
Confidence            3445555555555555555555554 35   345555555555555555555555 455555555 555554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=8.3e-18  Score=129.26  Aligned_cols=76  Identities=17%  Similarity=0.268  Sum_probs=38.8

Q ss_pred             ccChhHHHHHHhhhcCCCCCccCCccCCcCC-CchHHHhhhhhhcc-CCcccccccccccCChHHHHHHHHhhcCCCCc
Q psy16834        370 FARNCNLKLHIRRYHDKSDNTECPLCGKSFP-SRGRLNEHLIQVHP-AQKHQCHICNKIVVSEKTLKKHLLLHTNSEPF  446 (488)
Q Consensus       370 F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~-~~~~L~~H~~~~h~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  446 (488)
                      +.....+..|++ .|.++++|.|++||+.|. ....|..|+++|++ +++|+|++|++.|.++..|++|+++|++++|+
T Consensus         6 ~~~~~~~~~h~~-~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQR-AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHH-TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCcHHHHHH-HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            333444445543 355555555555555555 55555555555444 44555555555555555555555555555543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=8.2e-17  Score=117.77  Aligned_cols=66  Identities=26%  Similarity=0.437  Sum_probs=61.6

Q ss_pred             hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       383 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      .+.++++|.|++|++.|.+...|..|++.|++++||+|++|++.|.+...|.+|+++|+|++||+|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            366788999999999999999999999998899999999999999999999999999999999998

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=3.2e-17  Score=120.72  Aligned_cols=62  Identities=24%  Similarity=0.438  Sum_probs=54.8

Q ss_pred             hhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccc-cccccCc
Q psy16834        411 QVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHM-RTHTGNW  472 (488)
Q Consensus       411 ~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~-~~H~~~~  472 (488)
                      .+.+.++|.|++|++.|.++..|++|+++|+|++||.|++|+++|.++.+|..|+ ++|++|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3456678999999999999999999999999999999999999999999999997 5688763

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.64  E-value=9.2e-17  Score=116.49  Aligned_cols=60  Identities=27%  Similarity=0.583  Sum_probs=33.9

Q ss_pred             cCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        414 PAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       414 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      ++++|+|++|++.|.+...|..|+++|++++||+|++|++.|.+++.|..|+++|+|++|
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            344555555555555555555555555555555555555555555555555555555544

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.63  E-value=1.4e-16  Score=119.07  Aligned_cols=78  Identities=27%  Similarity=0.432  Sum_probs=64.6

Q ss_pred             cccc--ccccccccChhHHHHHHhhhcCCCCCccCCc--cCCcCCCchHHHhhhhhhccCCcccccc---cccccCChHH
Q psy16834        360 RFKC--VFCEKSFARNCNLKLHIRRYHDKSDNTECPL--CGKSFPSRGRLNEHLIQVHPAQKHQCHI---CNKIVVSEKT  432 (488)
Q Consensus       360 ~~~C--~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~~h~~~~~~C~~---C~k~f~~~~~  432 (488)
                      ||.|  +.||+.|.+.+.|..|++ .|.++++|.|++  ||++|.+.+.|..|++.|++   |.|++   |++.|.+...
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5778  778888888888888875 577788888877  88888888888888888776   88888   8888888888


Q ss_pred             HHHHHHhhc
Q psy16834        433 LKKHLLLHT  441 (488)
Q Consensus       433 L~~H~~~H~  441 (488)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            888888774

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=6.8e-17  Score=123.47  Aligned_cols=68  Identities=21%  Similarity=0.288  Sum_probs=57.8

Q ss_pred             CCCCCccCCccCCcCCCchHHHhhhhh-h---ccCCcccccccccccCChHHHHHH-HHhhcCCCCcCCcchh
Q psy16834        385 DKSDNTECPLCGKSFPSRGRLNEHLIQ-V---HPAQKHQCHICNKIVVSEKTLKKH-LLLHTNSEPFHCPECG  452 (488)
Q Consensus       385 ~~~~~~~C~~C~k~F~~~~~L~~H~~~-~---h~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~~~~~C~~C~  452 (488)
                      +|++||.|++||+.|..++.|..|++. |   .+++||.|++||++|.++..|..| +++|+|++||.|+++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            577888888888888888888888874 5   356789999999999999999999 7999999999998854

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.63  E-value=3.5e-16  Score=113.36  Aligned_cols=64  Identities=23%  Similarity=0.492  Sum_probs=59.3

Q ss_pred             hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCc
Q psy16834        383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPF  446 (488)
Q Consensus       383 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  446 (488)
                      .+.++++|.|++|++.|.+.+.|..|++.|+++++|+|++|++.|.++..|.+|+++|+|++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4678889999999999999999999999999999999999999999999999999999999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=1.5e-16  Score=122.16  Aligned_cols=77  Identities=23%  Similarity=0.384  Sum_probs=72.5

Q ss_pred             CcCCCchHHHhhhhhhccCCcccccccccccC-ChHHHHHHHHhhcC-CCCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        397 KSFPSRGRLNEHLIQVHPAQKHQCHICNKIVV-SEKTLKKHLLLHTN-SEPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       397 k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~-~~~~L~~H~~~H~~-~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      .++...+.+..|+++|.++++|.|++|++.|. ++..|+.|+++|++ ++||.|++|+++|.++..|..|+++|++++|
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45777788899999999999999999999999 99999999999999 9999999999999999999999999999987

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.62  E-value=2.2e-17  Score=134.19  Aligned_cols=112  Identities=20%  Similarity=0.228  Sum_probs=85.4

Q ss_pred             hccCCCcccCCCCCCccCChHHHHHHHHh---hcCCCcccccccccccc------ChhHHHHHHhhhcCCCCCccCCccC
Q psy16834        326 THLKDYKVLCPICGYGCFRNAELEEHFIS---AHSADRFKCVFCEKSFA------RNCNLKLHIRRYHDKSDNTECPLCG  396 (488)
Q Consensus       326 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---~~~~~~~~C~~C~k~F~------~~~~l~~H~~~~H~~~~~~~C~~C~  396 (488)
                      .+.++.+|.|...+....  ..+..+...   ....+++.|++|++.|.      ....|..|++  |.+++||.|++||
T Consensus         6 ~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~--h~~~~~~~C~~C~   81 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA--SKAISQFVCPLCL   81 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH--HHHHCSEECTTTC
T ss_pred             hcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHH--hCCCCCeECCCCC
Confidence            445566666655443321  223333221   22245688888888776      6677888873  7889999999999


Q ss_pred             CcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCC
Q psy16834        397 KSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       397 k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      +.|...+.|..|+++|  ++||.|++|++.|.++..|.+|+++|+|+
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9999999999999986  88999999999999999999999999986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=1.1e-16  Score=115.44  Aligned_cols=63  Identities=30%  Similarity=0.465  Sum_probs=51.8

Q ss_pred             hhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCc
Q psy16834        410 IQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       410 ~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      ++|.+++||+|++|++.|.+...|+.|+++|++++||+|++|++.|.+...|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            456677788888888888888888888888888888888888888888888888888888764

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.2e-17  Score=121.03  Aligned_cols=72  Identities=15%  Similarity=0.188  Sum_probs=62.0

Q ss_pred             CchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        401 SRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       401 ~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +++.|..|++.|++++||.|++|++.|.+...|..       ++||.|++||++|.+.++|..|+++|+|++| |.|++|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~-~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKT-SGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC-SSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC-CCCCCC
Confidence            35567788888778888888888888888877776       7899999999999999999999999999987 999988

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.6e-16  Score=113.77  Aligned_cols=62  Identities=23%  Similarity=0.456  Sum_probs=47.5

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      +.++++|+|++|++.|.+...|+.|+++|++++||.|++|+++|.+...|..|+++|++++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            34566777777777777777777777777777778888888888888888888877777765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.60  E-value=2.9e-16  Score=107.47  Aligned_cols=56  Identities=29%  Similarity=0.533  Sum_probs=45.0

Q ss_pred             CCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcccccccc
Q psy16834        415 AQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       415 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      ++||+|++|++.|.+...|..|+++|++++||.|++|+++|.++.+|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            56788888888888888888888888888888888888888888888888888764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.59  E-value=5.8e-16  Score=105.91  Aligned_cols=56  Identities=34%  Similarity=0.590  Sum_probs=48.4

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCc
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      ||+|++|++.|.+...|..|+++|++++||.|++|+++|.+.++|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68888888888888888888888888888888888888888888888888888764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=116.33  Aligned_cols=80  Identities=18%  Similarity=0.225  Sum_probs=61.6

Q ss_pred             cccccChhHHHHHHhhhcCCCCCccCCccCCcC-CCchHHHhhhhhhccCCcccccccccccCChHHHHHH-HHhhcCCC
Q psy16834        367 EKSFARNCNLKLHIRRYHDKSDNTECPLCGKSF-PSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKH-LLLHTNSE  444 (488)
Q Consensus       367 ~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F-~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~~  444 (488)
                      ..+|.....|..|++ .|.++++|.|++||+.| .+.+.|..|+++| +++||.|++|++.|.++..|+.| +++|+++.
T Consensus        13 ~~~~~~~~~~~~~~~-~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYL-EIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             CCSSCTTCHHHHHHH-HHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCCchHHHHHHH-HhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            345667777777765 46677788888888888 7888888888887 77888888888888888888888 88888765


Q ss_pred             CcCC
Q psy16834        445 PFHC  448 (488)
Q Consensus       445 ~~~C  448 (488)
                      .|.+
T Consensus        91 ~~~~   94 (96)
T 2ctd_A           91 SGPS   94 (96)
T ss_dssp             SCSC
T ss_pred             CCCC
Confidence            5543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.3e-16  Score=115.34  Aligned_cols=67  Identities=25%  Similarity=0.479  Sum_probs=52.6

Q ss_pred             HHhhhhhhccCCcccccccccccCChHHHHHHHH-hhcCC-CCcCCcchhhccCChhhHhccccccccC
Q psy16834        405 LNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLL-LHTNS-EPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       405 L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |.+|+++|.+++||.|++|++.|.++..|+.|++ .|+++ +||.|++|++.|.++..|..|+++|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            4567777777888888888888888888888876 67764 7888888888888888888888875543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.3e-15  Score=107.70  Aligned_cols=65  Identities=17%  Similarity=0.225  Sum_probs=55.5

Q ss_pred             hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcC
Q psy16834        383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFH  447 (488)
Q Consensus       383 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~  447 (488)
                      .|+++++|.|++|++.|.+...|..|++.|+++++|+|++|++.|.+...|..|+++|++++|..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            36778888888888888888888888888888888999999999999999999999998887753

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=7.6e-16  Score=108.85  Aligned_cols=60  Identities=22%  Similarity=0.485  Sum_probs=46.8

Q ss_pred             hhccCCcccccccccccCChHHHHHHHHh-h-cCCCCcCCcchhhccCChhhHhcccccccc
Q psy16834        411 QVHPAQKHQCHICNKIVVSEKTLKKHLLL-H-TNSEPFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       411 ~~h~~~~~~C~~C~k~f~~~~~L~~H~~~-H-~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      +|.+++||.|++|++.|.+...|..|+++ | ++++||.|++||++|.+.+.|..|+++|+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45667778888888888888888888777 6 577888888888888888888888887765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.6e-15  Score=108.04  Aligned_cols=63  Identities=24%  Similarity=0.394  Sum_probs=57.5

Q ss_pred             hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy16834        383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEP  445 (488)
Q Consensus       383 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  445 (488)
                      +|+++++|.|++|++.|.....|..|++.|++++||+|++|++.|.++..|++|+++|+++.+
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            688899999999999999999999999998889999999999999999999999999988753

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=3.1e-15  Score=103.42  Aligned_cols=57  Identities=30%  Similarity=0.716  Sum_probs=50.3

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccc-cccccCc
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHM-RTHTGNW  472 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~-~~H~~~~  472 (488)
                      +||+|++|++.|.+...|..|+++|++++||.|++|+++|.+++.|..|+ ++|+++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            47899999999999999999999999999999999999999999999996 6788764

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=2.3e-17  Score=119.44  Aligned_cols=72  Identities=18%  Similarity=0.246  Sum_probs=65.4

Q ss_pred             ChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        372 RNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       372 ~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +.++|..|++ .|.++++|.|++||+.|.+.+.|..       +++|.|++|++.|.+...|..|+++|+|++||.|++|
T Consensus         2 ~~~~l~~H~~-~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCC-CCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             cchhHHHHHH-HhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3567888986 6899999999999999999998877       7899999999999999999999999999999999987

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=4e-15  Score=109.43  Aligned_cols=62  Identities=31%  Similarity=0.628  Sum_probs=50.6

Q ss_pred             hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHH-HhhcCCC
Q psy16834        383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHL-LLHTNSE  444 (488)
Q Consensus       383 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~  444 (488)
                      .+.+.++|.|++||+.|.+++.|..|+++|++++||+|++|+++|.++..|.+|+ ++|++|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4566777888888888888888888888888888888888888888888888886 5688764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.50  E-value=1.6e-14  Score=98.56  Aligned_cols=56  Identities=21%  Similarity=0.395  Sum_probs=47.3

Q ss_pred             CccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        389 NTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       389 ~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      ||.|++||+.|.+.+.|..|++.|++++||.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57788888888888888888888888888888888888888888888888888875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=1.5e-14  Score=98.81  Aligned_cols=57  Identities=32%  Similarity=0.526  Sum_probs=43.7

Q ss_pred             CCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcC
Q psy16834        386 KSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       386 ~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      ++++|.|++||+.|.+.+.|..|+++|++++||.|++|++.|.++..|..|+++|.+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            356788888888888888888888888888888888888888888888888888763

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=6.9e-15  Score=107.70  Aligned_cols=62  Identities=26%  Similarity=0.397  Sum_probs=40.7

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcC---CCCcCCcchhhccCChhhHhcccc-ccccCcC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTN---SEPFHCPECGKAFKFKRYVTLHMR-THTGNWP  473 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~---~~~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~  473 (488)
                      |.+++||+|++|++.|.+...|..|+++|++   ++||.|++|++.|.++..|..|++ .|.++.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3455666777777777777777777777664   667777777777777777777773 4544443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=8.2e-15  Score=103.45  Aligned_cols=61  Identities=13%  Similarity=0.380  Sum_probs=42.6

Q ss_pred             hhcCCCCCccCCccCCcCCCchHHHhhhhhhc--cCCcccccccccccCChHHHHHHHHhhcC
Q psy16834        382 RYHDKSDNTECPLCGKSFPSRGRLNEHLIQVH--PAQKHQCHICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       382 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h--~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      +.|++++||.|++||+.|.+.+.|..|++.+|  +++||+|++|++.|.++..|..|+++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            35666777777777777777777777776633  55677777777777777777777777664

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=7.2e-15  Score=107.28  Aligned_cols=70  Identities=27%  Similarity=0.510  Sum_probs=54.7

Q ss_pred             HHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccC--CcccccccccccCChHHHHHHHHh-hcCCCCc
Q psy16834        376 LKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPA--QKHQCHICNKIVVSEKTLKKHLLL-HTNSEPF  446 (488)
Q Consensus       376 l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~--~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~  446 (488)
                      |.+|++ .|++++||.|++|++.|.+...|..|++.+|..  ++|+|++|++.|.++..|..|+++ |.++.|.
T Consensus         3 ~~~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A            3 SGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CCCCCC-CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             CCcccc-ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            446765 588888888888888888888888888754443  689999999999999999999887 4555553

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.1e-14  Score=105.10  Aligned_cols=56  Identities=30%  Similarity=0.647  Sum_probs=37.8

Q ss_pred             cCCccccc--ccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccc
Q psy16834        414 PAQKHQCH--ICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHT  469 (488)
Q Consensus       414 ~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~  469 (488)
                      ++++|.|+  .|++.|.++..|..|+++|++++||.|++||++|.+.+.|..|+++|+
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34566665  366666666666677777777777777777777777777777776664

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.1e-14  Score=105.09  Aligned_cols=69  Identities=22%  Similarity=0.396  Sum_probs=61.3

Q ss_pred             hhHHHHHHhhhcCCCCCccCC--ccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhc
Q psy16834        373 NCNLKLHIRRYHDKSDNTECP--LCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       373 ~~~l~~H~~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      ...|..|+..+|.++++|.|+  .||+.|.+.+.|..|++.|++++||+|++|++.|.+...|.+|+++|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            3 PHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             -----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            356778888889999999997  599999999999999999999999999999999999999999999985

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.47  E-value=2.7e-14  Score=108.99  Aligned_cols=60  Identities=27%  Similarity=0.434  Sum_probs=36.6

Q ss_pred             ccccccccccCChHHHHHHHHh-hcCCCC--------cCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLL-HTNSEP--------FHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~-H~~~~~--------~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+|++|++.|.+...|.+|+++ |++++|        |.|++|+++|.++..|..||++|+|++| |.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS-GPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC-CSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            4566666666666666666655 555555        6666666666666666666666666655 6654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=8e-14  Score=106.33  Aligned_cols=61  Identities=16%  Similarity=0.236  Sum_probs=44.6

Q ss_pred             ccCCccCCcCCCchHHHhhhhh-hccCCc--------ccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        390 TECPLCGKSFPSRGRLNEHLIQ-VHPAQK--------HQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       390 ~~C~~C~k~F~~~~~L~~H~~~-~h~~~~--------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      +.|++|++.|.+...|..|++. |.++++        |.|++|++.|.++..|+.|+++|+|++||.|+.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4455555555555555555554 333333        899999999999999999999999999999963

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=4.4e-14  Score=103.38  Aligned_cols=66  Identities=20%  Similarity=0.302  Sum_probs=56.9

Q ss_pred             cCCCCCccCCccCCcCCCchHHHhhhhhhcc---CCcccccccccccCChHHHHHHH-HhhcCCCCcCCc
Q psy16834        384 HDKSDNTECPLCGKSFPSRGRLNEHLIQVHP---AQKHQCHICNKIVVSEKTLKKHL-LLHTNSEPFHCP  449 (488)
Q Consensus       384 H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~---~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~  449 (488)
                      |+++++|.|++||+.|...+.|..|++.|++   +++|.|++|++.|.++..|..|+ +.|.+++|..-.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            7788899999999999999999999888875   78999999999999999999998 568888776654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=9.1e-14  Score=95.92  Aligned_cols=56  Identities=20%  Similarity=0.505  Sum_probs=41.4

Q ss_pred             CCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHH-HhhcCC
Q psy16834        388 DNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHL-LLHTNS  443 (488)
Q Consensus       388 ~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~  443 (488)
                      +||.|++||+.|.+.+.|..|++.|++++||.|++|++.|.++..|..|+ ++|+|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            36777777777777777777777777777777777777777777777776 567764

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=3.3e-14  Score=100.24  Aligned_cols=59  Identities=20%  Similarity=0.401  Sum_probs=49.5

Q ss_pred             ccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc-chhhccCChhhHhccccccccCcC
Q psy16834        413 HPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP-ECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       413 h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~-~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      -+.+||+|++|++.|. ...|+.|+++ ++++||.|+ .||++|..++.|..|+++|.++.|
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3557888888888888 8888888888 888888888 888888888888888888877654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.6e-14  Score=92.02  Aligned_cols=44  Identities=30%  Similarity=0.425  Sum_probs=28.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC-CSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCC-CCCCCC
Confidence            55666666666666666666666666666666666665 666665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.41  E-value=3.8e-14  Score=91.91  Aligned_cols=44  Identities=20%  Similarity=0.288  Sum_probs=30.2

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||+|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC-SCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCC-cCCCCC
Confidence            56666666777777777777777777777777766665 676665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.3e-14  Score=92.19  Aligned_cols=44  Identities=34%  Similarity=0.493  Sum_probs=26.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC-SCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            45556666666666666666666666666666666655 666655

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4.9e-14  Score=91.39  Aligned_cols=44  Identities=20%  Similarity=0.395  Sum_probs=29.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT-SGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC-CCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            55666666666666666666666666666666666665 666665

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.40  E-value=2.4e-14  Score=92.88  Aligned_cols=44  Identities=18%  Similarity=0.216  Sum_probs=22.9

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|.+|+++|+|++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444445555555555555555555555555555555555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4.7e-14  Score=91.49  Aligned_cols=44  Identities=34%  Similarity=0.437  Sum_probs=28.5

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC-CSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55666666666666666666666666666666666665 666665

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.39  E-value=4.1e-14  Score=91.80  Aligned_cols=44  Identities=30%  Similarity=0.473  Sum_probs=27.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|+|++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCC-SCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55566666666666666666666666666666666655 666655

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.1e-14  Score=91.78  Aligned_cols=44  Identities=27%  Similarity=0.373  Sum_probs=24.4

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC-CCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCC-CCCCCC
Confidence            44555555555555555555555555555555555554 555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.2e-14  Score=91.30  Aligned_cols=44  Identities=34%  Similarity=0.537  Sum_probs=28.3

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP-SGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC-SCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55666666666666666666666666666666666665 666665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.2e-14  Score=91.29  Aligned_cols=44  Identities=34%  Similarity=0.487  Sum_probs=29.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC-CCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            56666666666666666666666666666666666665 666665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.3e-14  Score=91.20  Aligned_cols=44  Identities=39%  Similarity=0.648  Sum_probs=27.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS-SCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            45556666666666666666666666666666666655 666655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.7e-14  Score=91.48  Aligned_cols=45  Identities=33%  Similarity=0.495  Sum_probs=36.0

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +|+++|++++||.|++||++|.++++|..|+++|++++| |+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS-SCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            367778888888888888888888888888888888877 888877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.39  E-value=3.8e-14  Score=91.90  Aligned_cols=44  Identities=32%  Similarity=0.501  Sum_probs=24.9

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS-CSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            44555555555555555555555555555555555554 555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.2e-14  Score=91.70  Aligned_cols=44  Identities=32%  Similarity=0.444  Sum_probs=24.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||+|++||++|.++++|..|+++|++++| |+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCS-CSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            44555555555555555555555555555555555554 555554

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.1e-14  Score=91.75  Aligned_cols=44  Identities=30%  Similarity=0.535  Sum_probs=24.5

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.+++.|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC-SCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC-CCCCCC
Confidence            44555555555555555555555555555555555554 555554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=3.1e-14  Score=91.37  Aligned_cols=43  Identities=30%  Similarity=0.444  Sum_probs=21.4

Q ss_pred             HHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        437 LLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       437 ~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +++|+|++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCS-CSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            4444555555555555555555555555555554444 555444

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4.8e-14  Score=91.45  Aligned_cols=44  Identities=32%  Similarity=0.465  Sum_probs=26.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||+|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCC-SSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            45555566666666666666666666666666665555 666555

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.39  E-value=4.3e-14  Score=91.67  Aligned_cols=44  Identities=27%  Similarity=0.405  Sum_probs=25.7

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC-CSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            45555555556666666666665666666555555555 555554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4e-14  Score=91.82  Aligned_cols=44  Identities=34%  Similarity=0.594  Sum_probs=23.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.+++.|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC-CSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC-CCCCCC
Confidence            44555555555555555555555555555555555554 555554

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.4e-14  Score=91.64  Aligned_cols=44  Identities=30%  Similarity=0.435  Sum_probs=25.5

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.+++.|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCC-SCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            45555555555555555555555555555555555554 555555

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.9e-14  Score=91.39  Aligned_cols=44  Identities=27%  Similarity=0.332  Sum_probs=21.4

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||+|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS-SSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            44444444445554455555444445445444444444 444444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.38  E-value=5.8e-14  Score=91.06  Aligned_cols=44  Identities=30%  Similarity=0.542  Sum_probs=27.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.+++.|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP-SGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC-CSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            55566666666666666666666666666666666655 666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.8e-14  Score=91.44  Aligned_cols=44  Identities=30%  Similarity=0.443  Sum_probs=21.7

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP-SGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC-SSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            44444555555555555555555555555555544444 555443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5e-14  Score=91.35  Aligned_cols=44  Identities=30%  Similarity=0.458  Sum_probs=24.1

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|+|++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCS-CCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            44555555555555555555555555555555555554 555554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=4.8e-14  Score=91.43  Aligned_cols=44  Identities=27%  Similarity=0.445  Sum_probs=25.1

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCC-SSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            45555555555555555555555555555555555554 555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4e-14  Score=91.84  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=22.3

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|.+|+++|+|++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44444444555555555555555555555555555555555444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.5e-14  Score=91.18  Aligned_cols=44  Identities=16%  Similarity=0.098  Sum_probs=21.6

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44444444455555555555555555555555555555555444

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=6.2e-14  Score=90.93  Aligned_cols=44  Identities=30%  Similarity=0.427  Sum_probs=25.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.+++.|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC-CSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            45555555555555555555555555555555555555 555555

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=6.4e-14  Score=90.84  Aligned_cols=44  Identities=32%  Similarity=0.480  Sum_probs=27.2

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC-SCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55566666666666666666666666666666666655 666655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.8e-14  Score=91.88  Aligned_cols=44  Identities=20%  Similarity=0.283  Sum_probs=22.4

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.+.++|..|+++|++++| |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS-SCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            44445555555555555555555555555555555544 555544

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.2e-14  Score=91.70  Aligned_cols=44  Identities=18%  Similarity=0.290  Sum_probs=22.2

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            44444444555555555555555555555555555555555444

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.5e-14  Score=91.11  Aligned_cols=44  Identities=36%  Similarity=0.471  Sum_probs=23.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++++| |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP-SGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC-CCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34455555555555555555555555555555555544 555544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4e-14  Score=91.81  Aligned_cols=44  Identities=18%  Similarity=0.230  Sum_probs=23.1

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|.+|+++|+|++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444455555555555555555555555555555555555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.3e-14  Score=91.67  Aligned_cols=44  Identities=30%  Similarity=0.413  Sum_probs=22.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC-SSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            44455555555555555555555555555555555544 555544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.3e-14  Score=91.68  Aligned_cols=44  Identities=18%  Similarity=0.195  Sum_probs=23.6

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444555555555555555555555555555555555555544

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.1e-14  Score=91.77  Aligned_cols=44  Identities=32%  Similarity=0.469  Sum_probs=26.3

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCC-SCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            45556666666666666666666666666666666555 666555

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=6e-14  Score=90.99  Aligned_cols=44  Identities=23%  Similarity=0.311  Sum_probs=25.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.+.++|..|+++|++++| |+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC-SGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS-SCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            45555555555555555555555555555555555555 555554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5e-14  Score=91.36  Aligned_cols=44  Identities=18%  Similarity=0.203  Sum_probs=22.7

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|+|++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            44444445555555555555555555555555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.4e-14  Score=91.18  Aligned_cols=44  Identities=27%  Similarity=0.490  Sum_probs=24.5

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS-SCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC-CCCCCC
Confidence            44555555555555555555555555555555555554 555554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.6e-14  Score=91.13  Aligned_cols=44  Identities=32%  Similarity=0.429  Sum_probs=23.4

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|+|++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCC-SCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            44455555555555555555555555555555555544 555544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.36  E-value=2.7e-13  Score=87.78  Aligned_cols=45  Identities=33%  Similarity=0.477  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +|+++|++++||.|++||++|.+++.|..|+++|++++| |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC-SSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            478899999999999999999999999999999999987 999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=6.6e-14  Score=90.76  Aligned_cols=44  Identities=30%  Similarity=0.453  Sum_probs=23.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.+.++|..|+++|++++| |+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSC-CSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            44455555555555555555555555555555555554 555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.36  E-value=8.9e-14  Score=90.13  Aligned_cols=44  Identities=25%  Similarity=0.340  Sum_probs=26.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.++.+|..|+++|++++| |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC-CSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            45556666666666666666666666666666666555 666555

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.9e-13  Score=87.68  Aligned_cols=45  Identities=18%  Similarity=0.265  Sum_probs=40.4

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            477778888899999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=8.8e-14  Score=90.16  Aligned_cols=44  Identities=32%  Similarity=0.477  Sum_probs=25.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCC-CCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            45555555566666666666666666666655555555 555553

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=7.2e-14  Score=90.58  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=21.8

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|+|++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444455555555555555555555555555555555444

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.35  E-value=1.9e-13  Score=91.84  Aligned_cols=46  Identities=28%  Similarity=0.594  Sum_probs=23.4

Q ss_pred             hcCCCCcCCcchhhccCChhhHhcccc-ccccCcCccccccCcccccc
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHMR-THTGNWPTFVCKICNATISS  486 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~~~~C~~C~k~f~~  486 (488)
                      |++++||.|++|++.|.+...|..|++ +|++++| |.|++||++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~-~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCC-ccCCCCCCCCCC
Confidence            444455555555555555555555554 4555544 555555555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.35  E-value=2.9e-13  Score=87.67  Aligned_cols=45  Identities=13%  Similarity=0.195  Sum_probs=39.9

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477777888899999999999999999999999999999999887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.5e-13  Score=87.26  Aligned_cols=45  Identities=20%  Similarity=0.339  Sum_probs=41.0

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.1e-14  Score=90.95  Aligned_cols=44  Identities=18%  Similarity=0.189  Sum_probs=23.7

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44444555555555555555555555555555555555555544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.2e-13  Score=87.45  Aligned_cols=45  Identities=20%  Similarity=0.191  Sum_probs=40.8

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|.+|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.3e-13  Score=89.76  Aligned_cols=44  Identities=34%  Similarity=0.443  Sum_probs=28.5

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhcccc-ccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMR-THTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~~~~C~~C  480 (488)
                      |+++|+|++||.|++||++|.++++|..|++ +|++++| |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~-~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP-SGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS-SSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC-CCCCCC
Confidence            5566666666666666666666666666666 6666665 666665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3e-13  Score=87.60  Aligned_cols=45  Identities=31%  Similarity=0.398  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +|+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCT-TSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            478899999999999999999999999999999999988 999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.7e-13  Score=87.15  Aligned_cols=45  Identities=27%  Similarity=0.508  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +|+++|++++||.|++||++|.+++.|..|+++|++++| |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH-SGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS-CCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            478899999999999999999999999999999999987 999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=87.52  Aligned_cols=45  Identities=18%  Similarity=0.265  Sum_probs=41.0

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.7e-13  Score=87.85  Aligned_cols=45  Identities=33%  Similarity=0.430  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +|+++|+|++||.|++||++|.++++|..|+++|+|++| |+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSC-CSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            478899999999999999999999999999999999988 999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3e-13  Score=87.59  Aligned_cols=45  Identities=16%  Similarity=0.266  Sum_probs=41.1

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.9e-13  Score=87.64  Aligned_cols=45  Identities=36%  Similarity=0.482  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +|+++|++++||.|++||++|.++++|..|+++|+|++| |+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCC-SCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCC-CCCCCC
Confidence            478899999999999999999999999999999999988 999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.34  E-value=2.8e-13  Score=87.76  Aligned_cols=45  Identities=18%  Similarity=0.124  Sum_probs=41.1

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.8e-13  Score=87.08  Aligned_cols=45  Identities=20%  Similarity=0.202  Sum_probs=41.6

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577888889999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.3e-13  Score=87.43  Aligned_cols=45  Identities=31%  Similarity=0.465  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +|+++|++++||.|++||++|.+++.|..|+++|+|++| |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSC-SSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC-CCCCCC
Confidence            478899999999999999999999999999999999988 999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.9e-13  Score=87.64  Aligned_cols=45  Identities=22%  Similarity=0.344  Sum_probs=41.2

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.6e-13  Score=87.23  Aligned_cols=45  Identities=20%  Similarity=0.235  Sum_probs=40.1

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477778888899999999999999999999999999999999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.8e-13  Score=86.19  Aligned_cols=44  Identities=18%  Similarity=0.198  Sum_probs=40.0

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |+++|.+++||+|++|++.|.++..|++|+++|+|++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56777888999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.1e-13  Score=87.52  Aligned_cols=45  Identities=22%  Similarity=0.352  Sum_probs=41.1

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.2e-13  Score=87.46  Aligned_cols=45  Identities=18%  Similarity=0.262  Sum_probs=41.4

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.34  E-value=4.4e-13  Score=96.26  Aligned_cols=56  Identities=32%  Similarity=0.588  Sum_probs=50.1

Q ss_pred             ccCCcccccc--cccccCChHHHHHHHHhhcCCCCcCCcc--hhhccCChhhHhcccccc
Q psy16834        413 HPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHCPE--CGKAFKFKRYVTLHMRTH  468 (488)
Q Consensus       413 h~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H  468 (488)
                      ...++|.|++  |++.|.+...|+.|+++|++++||+|++  |+++|.++..|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4556899988  9999999999999999999999999965  999999999999999886

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.4e-13  Score=88.07  Aligned_cols=45  Identities=16%  Similarity=0.089  Sum_probs=41.2

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||.|++|++.|.+.+.|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            577888888999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.34  E-value=3.4e-13  Score=87.33  Aligned_cols=45  Identities=18%  Similarity=0.300  Sum_probs=41.0

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=8.5e-14  Score=90.23  Aligned_cols=43  Identities=16%  Similarity=0.051  Sum_probs=20.8

Q ss_pred             hhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        409 LIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       409 ~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +++|.+++||+|++|++.|.++..|+.|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3344444445555555555555555555544554445544444

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.9e-13  Score=87.03  Aligned_cols=45  Identities=20%  Similarity=0.272  Sum_probs=41.1

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.7e-13  Score=87.17  Aligned_cols=45  Identities=31%  Similarity=0.468  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      .|+++|++++||.|++|+++|.+++.|..|+++|++++| |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCS-SCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCC-CCCCCC
Confidence            478899999999999999999999999999999999988 999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.7e-13  Score=87.16  Aligned_cols=45  Identities=20%  Similarity=0.276  Sum_probs=41.3

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.1e-13  Score=87.50  Aligned_cols=45  Identities=20%  Similarity=0.262  Sum_probs=41.1

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.5e-13  Score=86.77  Aligned_cols=45  Identities=18%  Similarity=0.189  Sum_probs=41.2

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.33  E-value=4.7e-13  Score=86.65  Aligned_cols=45  Identities=20%  Similarity=0.200  Sum_probs=39.9

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777888899999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.3e-13  Score=86.84  Aligned_cols=45  Identities=18%  Similarity=0.248  Sum_probs=40.0

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||.|++|++.|.++..|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477778888899999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.8e-13  Score=86.22  Aligned_cols=45  Identities=18%  Similarity=0.172  Sum_probs=40.2

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367777888899999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.7e-13  Score=86.24  Aligned_cols=45  Identities=13%  Similarity=0.066  Sum_probs=39.6

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367777888899999999999999999999999999999999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.2e-13  Score=86.44  Aligned_cols=45  Identities=18%  Similarity=0.202  Sum_probs=40.4

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|++|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367778888899999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.8e-13  Score=87.09  Aligned_cols=45  Identities=16%  Similarity=0.137  Sum_probs=41.2

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.+...|+.|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=5e-13  Score=86.52  Aligned_cols=45  Identities=18%  Similarity=0.262  Sum_probs=40.9

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|+.|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.9e-13  Score=86.59  Aligned_cols=45  Identities=18%  Similarity=0.241  Sum_probs=41.3

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.1e-13  Score=86.98  Aligned_cols=45  Identities=13%  Similarity=0.093  Sum_probs=40.7

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888899999999999999999999999999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.4e-13  Score=89.16  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=22.2

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4444444555555555555555555555555555555555544

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.8e-13  Score=86.18  Aligned_cols=45  Identities=18%  Similarity=0.189  Sum_probs=40.3

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|++|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777888899999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.3e-13  Score=87.42  Aligned_cols=45  Identities=18%  Similarity=0.278  Sum_probs=40.2

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477778888899999999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.8e-13  Score=86.60  Aligned_cols=45  Identities=33%  Similarity=0.511  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      .|+++|++++||.|++||++|.++++|..|+++|++++| |.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC-SSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC-CCCCCC
Confidence            478899999999999999999999999999999999988 999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.32  E-value=5.3e-13  Score=86.42  Aligned_cols=45  Identities=18%  Similarity=0.169  Sum_probs=40.9

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||.|++|++.|.++..|+.|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=4e-13  Score=94.57  Aligned_cols=59  Identities=24%  Similarity=0.378  Sum_probs=43.4

Q ss_pred             CCCCCccCCccCCcCCCchHHHhhhhhhccCCccccc-ccccccCChHHHHHHHHhhcCCCC
Q psy16834        385 DKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCH-ICNKIVVSEKTLKKHLLLHTNSEP  445 (488)
Q Consensus       385 ~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~-~C~k~f~~~~~L~~H~~~H~~~~~  445 (488)
                      .+++||.|++||+.|. .+.|..|+++ .+++||+|+ +|++.|..++.|..|+++|...+|
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4566777777777777 7777777776 777777777 777777777777777777776654

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.32  E-value=5.3e-14  Score=97.57  Aligned_cols=57  Identities=11%  Similarity=0.273  Sum_probs=38.6

Q ss_pred             HHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcc
Q psy16834        405 LNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLH  464 (488)
Q Consensus       405 L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H  464 (488)
                      |..|+++|.+++||+|++||+.|.+...|.   ++|+|++||.|++||++|....++..+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            445666666667777777777777766665   667777777777777777766665544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7.3e-13  Score=85.73  Aligned_cols=45  Identities=18%  Similarity=0.135  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      .|+++|++++||.|++||++|.++++|..|+++|++++| |+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN-SGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC-CCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            378899999999999999999999999999999999988 999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.3e-13  Score=87.43  Aligned_cols=45  Identities=18%  Similarity=0.194  Sum_probs=38.8

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|..|+++|+|++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777788888888888899888999999999999999999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.8e-13  Score=86.22  Aligned_cols=45  Identities=20%  Similarity=0.167  Sum_probs=41.4

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|++++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            477788889999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.3e-13  Score=86.05  Aligned_cols=45  Identities=18%  Similarity=0.209  Sum_probs=40.8

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +|+++|.+++||+|++|++.|.++..|.+|+++|+|++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999875

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7.7e-13  Score=85.64  Aligned_cols=45  Identities=13%  Similarity=0.130  Sum_probs=40.6

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367777888999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=1e-12  Score=88.22  Aligned_cols=47  Identities=19%  Similarity=0.289  Sum_probs=41.1

Q ss_pred             hccCCcccccccccccCChHHHHHHHH-hhcCCCCcCCcchhhccCCh
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLL-LHTNSEPFHCPECGKAFKFK  458 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~F~~~  458 (488)
                      +.+++||.|++|++.|.+...|.+|++ +|++++||+|++|+++|+++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            456778999999999999999999987 89999999999999999863

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.30  E-value=7.8e-13  Score=85.57  Aligned_cols=45  Identities=18%  Similarity=0.177  Sum_probs=40.3

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777888899999999999999999999999999999999987

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.1e-13  Score=86.92  Aligned_cols=42  Identities=36%  Similarity=0.551  Sum_probs=25.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCC-CCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            45556666666666666666666666666666665555 5554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.8e-13  Score=87.11  Aligned_cols=42  Identities=31%  Similarity=0.471  Sum_probs=24.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSC-CCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCC-CCCC
Confidence            45555566666666666666666666666666665555 5554

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.3e-13  Score=86.84  Aligned_cols=43  Identities=28%  Similarity=0.488  Sum_probs=28.5

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      |+++|++++||.|++|+++|.++..|..|+++|++++| |.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERP-SGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCS-CTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCC-CCCCC
Confidence            45666666666666666666666666666666666665 66653

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.30  E-value=3.1e-13  Score=85.65  Aligned_cols=41  Identities=34%  Similarity=0.543  Sum_probs=21.9

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|+|++| |.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESG-PSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCS-CCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCC-CCC
Confidence            34455555555555555555555555555555555544 554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.3e-13  Score=86.87  Aligned_cols=42  Identities=36%  Similarity=0.601  Sum_probs=23.7

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC-SCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            44555555555555555555555555555555555554 5554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.8e-13  Score=86.62  Aligned_cols=42  Identities=33%  Similarity=0.534  Sum_probs=24.2

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCC-SSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            45555555555555555555555555555555555554 5554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.1e-13  Score=86.95  Aligned_cols=42  Identities=31%  Similarity=0.476  Sum_probs=24.3

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCC-SSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCC-CCCC
Confidence            45555555555555555555555555555555555554 5554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.5e-13  Score=86.75  Aligned_cols=42  Identities=33%  Similarity=0.559  Sum_probs=24.4

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCC-CSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            45555555555555555555555555555555555555 5554

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.29  E-value=1.5e-13  Score=92.49  Aligned_cols=51  Identities=20%  Similarity=0.331  Sum_probs=30.4

Q ss_pred             CCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCc
Q psy16834        396 GKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPF  446 (488)
Q Consensus       396 ~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  446 (488)
                      ++.|...+.|..|++.|.+++||.|++|++.|.+...|..|+++|+|++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            355556666666666555555666666666666666666666666666555

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.1e-13  Score=85.26  Aligned_cols=44  Identities=27%  Similarity=0.419  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL-SGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCC-CCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            67889999999999999999999999999999999988 999988

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.9e-13  Score=86.55  Aligned_cols=42  Identities=36%  Similarity=0.541  Sum_probs=24.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC-SSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            45555556666666666666666666666666655555 5554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.29  E-value=1.5e-13  Score=95.26  Aligned_cols=51  Identities=20%  Similarity=0.406  Sum_probs=45.4

Q ss_pred             HHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccCccccccC
Q psy16834        433 LKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNATISSE  487 (488)
Q Consensus       433 L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~k~f~~~  487 (488)
                      |..|+++|+|++||.|++||++|.+.+.|.   ++|+|++| |.|++||+.|...
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~-~~C~~C~k~f~~~   52 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGT-FRCTFCHTEVEED   52 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTE-EBCSSSCCBCEEC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCC-EECCCCCCccccC
Confidence            456889999999999999999999999887   88999987 9999999999764

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.29  E-value=2.9e-13  Score=87.69  Aligned_cols=42  Identities=19%  Similarity=0.237  Sum_probs=22.5

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|.+|+++|+|++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444555555555555555555555555555555555554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.6e-13  Score=84.83  Aligned_cols=40  Identities=20%  Similarity=0.336  Sum_probs=21.1

Q ss_pred             HHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        437 LLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       437 ~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      +++|+|++||.|++|+++|.+++.|..|+++|++++| |+|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG-PSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS-CCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            4445555555555555555555555555555555544 554

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.5e-13  Score=86.75  Aligned_cols=42  Identities=36%  Similarity=0.507  Sum_probs=24.1

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p-~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCS-SCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCC-cCCC
Confidence            45555555555555555555555555555555555554 5554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.9e-13  Score=87.03  Aligned_cols=42  Identities=36%  Similarity=0.521  Sum_probs=22.1

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||+|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCC-CSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            44455555555555555555555555555555555544 5554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.9e-13  Score=83.98  Aligned_cols=41  Identities=34%  Similarity=0.618  Sum_probs=32.9

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|+|++||.|++||++|.++++|..|+++|+|++| |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            66778888888888888888888888888888888776 776

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.6e-13  Score=86.30  Aligned_cols=42  Identities=26%  Similarity=0.376  Sum_probs=23.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC-CCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            44555555555555555555555555555555555554 5554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.4e-13  Score=86.35  Aligned_cols=43  Identities=30%  Similarity=0.383  Sum_probs=27.1

Q ss_pred             HHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        437 LLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       437 ~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      +++|++++||.|++|+++|.++++|..|+++|++++| |.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP-SGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC-CSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            3456666666666666666666666666666666655 666665

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.6e-13  Score=86.70  Aligned_cols=42  Identities=33%  Similarity=0.507  Sum_probs=21.1

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++||++|.+++.|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCC-CSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCC-CCCC
Confidence            44445555555555555555555555555555555444 5444

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.5e-12  Score=84.63  Aligned_cols=45  Identities=18%  Similarity=0.242  Sum_probs=40.2

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHH-hhcCCCCcCCcch
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLL-LHTNSEPFHCPEC  451 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C  451 (488)
                      .|+++|.+++||+|++|++.|.++..|..|++ +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36777788889999999999999999999999 9999999999987

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3.5e-13  Score=87.27  Aligned_cols=42  Identities=19%  Similarity=0.176  Sum_probs=23.6

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.+...|+.|+++|+|++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.5e-12  Score=84.17  Aligned_cols=44  Identities=34%  Similarity=0.533  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++++| |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCS-SCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            78899999999999999999999999999999999988 999886

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.7e-13  Score=86.67  Aligned_cols=42  Identities=40%  Similarity=0.589  Sum_probs=21.4

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSS-SCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            44445555555555555555555555555555555544 5544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4e-13  Score=87.03  Aligned_cols=42  Identities=17%  Similarity=0.222  Sum_probs=23.8

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|+|++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.5e-13  Score=86.33  Aligned_cols=42  Identities=31%  Similarity=0.551  Sum_probs=24.3

Q ss_pred             HhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccC
Q psy16834        438 LLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      ++|++++||.|++|+++|.++..|..|+++|++++| |.|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC-CSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            455555555555555555555555555555555554 555554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.8e-13  Score=86.22  Aligned_cols=42  Identities=19%  Similarity=0.271  Sum_probs=22.0

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444444455555555555555555555555555555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.2e-13  Score=86.48  Aligned_cols=42  Identities=40%  Similarity=0.577  Sum_probs=22.9

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCS-SCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            44555555555555555555555555555555555554 5554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.1e-13  Score=86.94  Aligned_cols=42  Identities=19%  Similarity=0.294  Sum_probs=23.6

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.3e-13  Score=86.85  Aligned_cols=42  Identities=19%  Similarity=0.319  Sum_probs=22.0

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|+.|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            444444455555555555555555555555555555555554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.4e-13  Score=85.45  Aligned_cols=41  Identities=32%  Similarity=0.493  Sum_probs=23.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG-PSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS-CCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC-CCC
Confidence            45555555555555555555555555555555555554 555

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=7.4e-13  Score=84.82  Aligned_cols=41  Identities=41%  Similarity=0.665  Sum_probs=23.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|++++||.|++||++|.+++.|..|+++|+|++| |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS-SCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC-CCC
Confidence            45555555555555555555555555555555555554 555

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.26  E-value=1.6e-12  Score=87.33  Aligned_cols=52  Identities=19%  Similarity=0.208  Sum_probs=48.3

Q ss_pred             ccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccc
Q psy16834        424 NKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFV  476 (488)
Q Consensus       424 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~  476 (488)
                      +|.|.....|..|+++|+|++||.|++||++|.+.+.|..|+++|+|++| |.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP-GV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC-CC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC-CC
Confidence            47889999999999999999999999999999999999999999999987 63

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=8.6e-13  Score=84.94  Aligned_cols=40  Identities=18%  Similarity=0.302  Sum_probs=20.2

Q ss_pred             ccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchh
Q psy16834        413 HPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECG  452 (488)
Q Consensus       413 h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~  452 (488)
                      .+++||+|++|++.|..+..|..|+++|++++||.|++||
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3444555555555555555555555555555555555543

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=5.4e-13  Score=86.37  Aligned_cols=42  Identities=26%  Similarity=0.366  Sum_probs=25.4

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhcccccccc-CcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG-NWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~-~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++ ++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS-GPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTT-SSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            45556666666666666666666666666666666 555 6654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=1.3e-12  Score=85.30  Aligned_cols=42  Identities=21%  Similarity=0.417  Sum_probs=21.8

Q ss_pred             hcCCCCcCCcchhhccCChhhHhccccccccCcCccccccCcc
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNA  482 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~k  482 (488)
                      |++++||.|++|+++|.+...|..|+++|++++| |.|++|||
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCC-CCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCC-ccCCCCCC
Confidence            3444555555555555555555555555555544 55555543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=8.6e-13  Score=83.53  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=25.9

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|++++||.|++|+++|.++++|..|+++|++++| |+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            45566666666666666666666666666666666655 655

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=7.9e-13  Score=85.56  Aligned_cols=42  Identities=17%  Similarity=0.197  Sum_probs=20.2

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|.+|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444455555555555555555554445444444443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.25  E-value=2.3e-12  Score=83.35  Aligned_cols=44  Identities=34%  Similarity=0.551  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      .|+++|++++||.|++|+++|.+++.|..|+++|++++| |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCS-SSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            478899999999999999999999999999999999988 99975

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=84.65  Aligned_cols=42  Identities=31%  Similarity=0.475  Sum_probs=26.7

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.++.+|..|+++|++++| |.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC-CCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            45566666666666666666666666666666666655 6664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.4e-13  Score=85.99  Aligned_cols=42  Identities=26%  Similarity=0.413  Sum_probs=24.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||+|++|+++|.+.++|..|+++|++++| |.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC-CCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            45555555555555555555555555555555555554 5554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3e-12  Score=82.75  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=39.3

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||.|++|++.|.++..|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47778888889999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.2e-12  Score=82.62  Aligned_cols=44  Identities=20%  Similarity=0.268  Sum_probs=39.6

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=82.95  Aligned_cols=44  Identities=18%  Similarity=0.279  Sum_probs=39.0

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47777888889999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.7e-13  Score=86.25  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=24.2

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7.7e-13  Score=84.73  Aligned_cols=41  Identities=17%  Similarity=0.168  Sum_probs=20.4

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      |+++|.+++||+|++|++.|.+...|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            44444444455555555555555555555555555555544

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=82.91  Aligned_cols=44  Identities=32%  Similarity=0.447  Sum_probs=40.2

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      +|+++|++++||.|++|+++|.++++|..|+++|++++| |.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCC-CCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            478899999999999999999999999999999999988 99975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.24  E-value=3.5e-12  Score=80.65  Aligned_cols=42  Identities=14%  Similarity=0.129  Sum_probs=37.9

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|+|++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567778889999999999999999999999999999999985

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3e-12  Score=82.80  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=39.1

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            47777888889999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=82.91  Aligned_cols=44  Identities=32%  Similarity=0.559  Sum_probs=40.1

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      +|+++|++++||.|++|+++|.+++.|..|+++|++++| |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSC-SCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCC-CCCCC
Confidence            478899999999999999999999999999999999987 99975

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.4e-12  Score=82.50  Aligned_cols=44  Identities=18%  Similarity=0.255  Sum_probs=39.0

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47777788889999999999999999999999999999999974

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.1e-12  Score=83.96  Aligned_cols=41  Identities=15%  Similarity=0.331  Sum_probs=22.9

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|++++||.|++||++|.+.+.|..|+++|++++| |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG-PSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC-TTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCC
Confidence            45555555555555555555555555555555555554 555

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.2e-12  Score=82.61  Aligned_cols=44  Identities=18%  Similarity=0.234  Sum_probs=39.3

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888889999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=82.89  Aligned_cols=44  Identities=20%  Similarity=0.258  Sum_probs=39.9

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=3.5e-12  Score=82.43  Aligned_cols=44  Identities=39%  Similarity=0.540  Sum_probs=40.2

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      .|+++|++++||+|++|+++|.+.+.|..|+++|++++| |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSC-CCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            378899999999999999999999999999999999988 99975

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=7.1e-13  Score=83.92  Aligned_cols=41  Identities=24%  Similarity=0.409  Sum_probs=21.9

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|+|++||.|++||++|.+++.|..|+++|++++| |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            34455555555555555555555555555555555554 544

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=82.46  Aligned_cols=44  Identities=18%  Similarity=0.254  Sum_probs=39.2

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47777888889999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=8.8e-13  Score=84.42  Aligned_cols=41  Identities=24%  Similarity=0.473  Sum_probs=21.3

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++++| |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG-PSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCS-SCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCC-CCC
Confidence            44455555555555555555555555555555555544 544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=82.43  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=39.3

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-12  Score=84.85  Aligned_cols=42  Identities=33%  Similarity=0.546  Sum_probs=23.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++||++|.+++.|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCC-CCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            44555555555555555555555555555555555554 5554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.5e-12  Score=81.93  Aligned_cols=44  Identities=30%  Similarity=0.401  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      .|+++|++++||.|++|+++|.+++.|..|+++|++++| |.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC-CSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            378899999999999999999999999999999999987 99975

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.4e-12  Score=82.53  Aligned_cols=44  Identities=18%  Similarity=0.277  Sum_probs=39.8

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47778888899999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.3e-12  Score=82.57  Aligned_cols=44  Identities=18%  Similarity=0.214  Sum_probs=39.9

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.2e-12  Score=82.67  Aligned_cols=44  Identities=34%  Similarity=0.509  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      .|+++|++++||.|++|+++|.++++|..|+++|++++| |.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCC-SSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            378899999999999999999999999999999999988 99975

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.5e-13  Score=85.41  Aligned_cols=42  Identities=17%  Similarity=0.124  Sum_probs=25.7

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            555555556666666666666666666666666666666664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.8e-12  Score=79.62  Aligned_cols=42  Identities=14%  Similarity=0.162  Sum_probs=37.2

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |+++|.+++||+|++|++.|.++..|.+|+++|++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566778888999999999999999999999999999999984

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=4.4e-12  Score=82.80  Aligned_cols=42  Identities=24%  Similarity=0.472  Sum_probs=37.3

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhh
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGK  453 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~  453 (488)
                      +.++++|.|++|++.|.+...|.+|+++|++++||.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            356678999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.7e-12  Score=81.81  Aligned_cols=43  Identities=16%  Similarity=0.257  Sum_probs=38.2

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      |+++|.+++||+|++|++.|.++..|++|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6677788889999999999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.6e-12  Score=80.99  Aligned_cols=43  Identities=19%  Similarity=0.099  Sum_probs=38.6

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4777888888999999999999999999999999999999985

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.1e-12  Score=82.13  Aligned_cols=44  Identities=27%  Similarity=0.377  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      +|+++|++++||.|++|+++|.+++.|..|+++|++++| |.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCS-SSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            478899999999999999999999999999999999988 99974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.2e-12  Score=81.63  Aligned_cols=44  Identities=18%  Similarity=0.280  Sum_probs=39.9

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|.+|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47788888899999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.8e-12  Score=82.27  Aligned_cols=44  Identities=18%  Similarity=0.261  Sum_probs=39.7

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=6.2e-12  Score=80.82  Aligned_cols=43  Identities=28%  Similarity=0.526  Sum_probs=38.5

Q ss_pred             HhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccCc
Q psy16834        438 LLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICN  481 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~  481 (488)
                      .+|++++||.|++|+++|.+++.|..|+++|++++| |.|++||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG-KSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCC-CCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCC-CCCcCCC
Confidence            368899999999999999999999999999999887 9999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.21  E-value=1.1e-12  Score=82.96  Aligned_cols=41  Identities=17%  Similarity=0.120  Sum_probs=22.7

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      |+++|.+++||+|++|++.|.++..|+.|+++|++++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34444555555555555555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.7e-12  Score=81.84  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=38.0

Q ss_pred             hhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        409 LIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       409 ~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      +++|.+++||+|++|++.|.++..|+.|+++|++++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3566778899999999999999999999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=81.79  Aligned_cols=43  Identities=30%  Similarity=0.506  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      +|+++|++++||.|++|+++|.+++.|..|+++|++++| |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB-TTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC-CCCC
Confidence            478899999999999999999999999999999999987 9986

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.2e-12  Score=80.78  Aligned_cols=43  Identities=35%  Similarity=0.507  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      +|+++|+|++||.|++|+++|.++++|..|+++|+|++| |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC-SCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC-CCCC
Confidence            478899999999999999999999999999999999987 9985

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=81.94  Aligned_cols=42  Identities=21%  Similarity=0.288  Sum_probs=35.3

Q ss_pred             hhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        410 IQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       410 ~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      ++|.+++||+|++|++.|.++..|..|+++|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456677888888888888888888888888888888888887

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-12  Score=83.83  Aligned_cols=41  Identities=32%  Similarity=0.382  Sum_probs=26.0

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|++++||.|++|+++|.+.++|..|+++|++++| |.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG-PSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC-CSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC-CCC
Confidence            55566666666666666666666666666666666655 655

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.8e-12  Score=80.76  Aligned_cols=42  Identities=26%  Similarity=0.379  Sum_probs=39.2

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++++| |+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS-CSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            78899999999999999999999999999999999988 9986

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-12  Score=84.98  Aligned_cols=42  Identities=29%  Similarity=0.467  Sum_probs=21.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.+++.|..|+++|++++| |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP-SGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC-SSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            44455555555555555555555555555555555544 5543

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.1e-12  Score=82.58  Aligned_cols=41  Identities=20%  Similarity=0.241  Sum_probs=22.7

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||+|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34444555555555555555555555555555555555555

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.3e-12  Score=80.36  Aligned_cols=43  Identities=14%  Similarity=0.152  Sum_probs=39.1

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|+|++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778888889999999999999999999999999999999995

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=7.1e-12  Score=80.11  Aligned_cols=43  Identities=16%  Similarity=0.182  Sum_probs=39.0

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      .|+++|.+++||.|++|++.|.+...|..|+++|+|++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4777888889999999999999999999999999999999995

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.19  E-value=1e-11  Score=88.98  Aligned_cols=57  Identities=19%  Similarity=0.433  Sum_probs=38.5

Q ss_pred             cCCCCCccCCc--cCCcCCCchHHHhhhhhhccCCcccccc--cccccCChHHHHHHHHhh
Q psy16834        384 HDKSDNTECPL--CGKSFPSRGRLNEHLIQVHPAQKHQCHI--CNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       384 H~~~~~~~C~~--C~k~F~~~~~L~~H~~~~h~~~~~~C~~--C~k~f~~~~~L~~H~~~H  440 (488)
                      ....++|.|++  |++.|...+.|..|++.|++++||+|++  |++.|..+..|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34556666666  7777777777777766666667777754  777777777777777665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.1e-12  Score=79.86  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=36.0

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|+|++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67777888889999999999999999999999999999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=7.1e-12  Score=80.11  Aligned_cols=43  Identities=12%  Similarity=0.170  Sum_probs=38.5

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      +|+++|.+++||+|++|++.|..+..|..|+++|++++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4777788888999999999999999999999999999999984

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.9e-12  Score=81.35  Aligned_cols=44  Identities=18%  Similarity=0.197  Sum_probs=38.6

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46777788889999999999999999999999999999999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=8.9e-12  Score=78.74  Aligned_cols=41  Identities=29%  Similarity=0.353  Sum_probs=36.9

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      |+++|.+++||+|++|++.|.+++.|+.|+++|+|++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            66777888899999999999999999999999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.5e-12  Score=80.88  Aligned_cols=44  Identities=18%  Similarity=0.272  Sum_probs=39.5

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999963

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=6.5e-12  Score=81.15  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=39.0

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcC-CCCcCCcc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTN-SEPFHCPE  450 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~  450 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++ ++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777888899999999999999999999999999 99999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=80.22  Aligned_cols=43  Identities=16%  Similarity=0.299  Sum_probs=37.2

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      |+++|.+++||+|++|++.|.++..|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667778889999999999999999999999999999999863

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.2e-12  Score=81.74  Aligned_cols=41  Identities=34%  Similarity=0.579  Sum_probs=21.6

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|++++||.|++|+++|.+.+.|..|+++|++++| |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG-PSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC-CCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC-CCC
Confidence            44455555555555555555555555555555555544 443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.17  E-value=1.1e-11  Score=78.27  Aligned_cols=41  Identities=22%  Similarity=0.430  Sum_probs=37.7

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      |+++|++++||.|++||++|.++++|..|+++|++++| |+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            67889999999999999999999999999999999987 887

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=4.7e-12  Score=81.84  Aligned_cols=39  Identities=23%  Similarity=0.448  Sum_probs=21.9

Q ss_pred             hhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        411 QVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       411 ~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      .|++++||+|++|++.|.++..|..|+++|++++||+|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            344555555555555555555555555555555555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.4e-11  Score=78.70  Aligned_cols=42  Identities=21%  Similarity=0.300  Sum_probs=38.1

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |+++|++++||.|++|+++|.+.+.|..|+++|++++| |+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG-PSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC-CCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC-CCCC
Confidence            67889999999999999999999999999999999987 9885

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.7e-12  Score=83.18  Aligned_cols=43  Identities=28%  Similarity=0.378  Sum_probs=24.4

Q ss_pred             HHhhcCCCCcCCc--chhhccCChhhHhccccccccCcCccccccC
Q psy16834        437 LLLHTNSEPFHCP--ECGKAFKFKRYVTLHMRTHTGNWPTFVCKIC  480 (488)
Q Consensus       437 ~~~H~~~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C  480 (488)
                      .++|++++||+|+  .|+++|.+++.|..|+++|++++| |+|++|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS-CSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            3455555555555  555555555555555555555554 555554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.8e-12  Score=78.75  Aligned_cols=41  Identities=24%  Similarity=0.366  Sum_probs=37.4

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      |+++|.+++||+|++|++.|.+...|..|+++|+|++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            66777888999999999999999999999999999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.16  E-value=6.5e-12  Score=79.80  Aligned_cols=38  Identities=18%  Similarity=0.255  Sum_probs=22.5

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      |.+++||+|++|++.|.++..|..|+++|++++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44555566666666666666666666666666666654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=2.4e-12  Score=95.53  Aligned_cols=58  Identities=16%  Similarity=0.196  Sum_probs=51.9

Q ss_pred             hhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        410 IQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       410 ~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      ++|.+++||+|++|++.|.+...|..|+++|++++||+|..    |.....|..|.++|.|.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~----~~~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR----QERRKQLLSKQKYADGA   75 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC----CSCCCCCCCCCCCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch----hhhHHHHHhhhcccccc
Confidence            45678899999999999999999999999999999999965    45678899999999985

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.4e-12  Score=92.62  Aligned_cols=68  Identities=18%  Similarity=0.215  Sum_probs=58.7

Q ss_pred             chHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhccccccccCc
Q psy16834        402 RGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       402 ~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      ++.|..|++.+.+.+|+.|+.|++.| ....|..|+ +|.+++||.|+.|++.|. ...|..|+++|+++.
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             chHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            45677888888888999999999999 489999998 899999999999999877 589999999998864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.9e-12  Score=81.81  Aligned_cols=39  Identities=36%  Similarity=0.634  Sum_probs=19.0

Q ss_pred             hhcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        439 LHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       439 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      +|++++||.|++|++.|.++..|..|+++|++++| |.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCC-CCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCC-CCCC
Confidence            44444445555555555554555555444444444 4443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.5e-12  Score=80.86  Aligned_cols=43  Identities=21%  Similarity=0.194  Sum_probs=38.4

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      .|+++|.+++||+|++|++.|.++..|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4777888888999999999999999999999999999999996

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.5e-11  Score=78.37  Aligned_cols=42  Identities=26%  Similarity=0.311  Sum_probs=37.2

Q ss_pred             HHhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        437 LLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       437 ~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      +++|++++||.|++|+++|.++++|..|+++|++++| |+|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCC-SSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCC-CCCCC
Confidence            5678999999999999999999999999999999887 99874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9e-12  Score=79.62  Aligned_cols=43  Identities=16%  Similarity=0.178  Sum_probs=38.3

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      +|+++|.+++||+|++|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4777888888999999999999999999999999999999984

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=3.5e-11  Score=76.32  Aligned_cols=41  Identities=15%  Similarity=0.143  Sum_probs=36.0

Q ss_pred             HhhcCCCCcCCcchhhccCChhhHhccccccccCcCcccccc
Q psy16834        438 LLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      ++|++++||.|++|++.|.+++.|..|+++|++++| |.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKS-GPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC-SSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCC-ccCCC
Confidence            468889999999999999999999999999999887 98875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.2e-11  Score=77.63  Aligned_cols=38  Identities=39%  Similarity=0.671  Sum_probs=22.0

Q ss_pred             hhcCCCCcCCcchhhccCChhhHhccccccccCcCcccc
Q psy16834        439 LHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVC  477 (488)
Q Consensus       439 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C  477 (488)
                      +|++++||.|++|+++|.++++|..|+++|++++| |+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            45555555555555555555555555555555554 554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.9e-11  Score=77.17  Aligned_cols=43  Identities=14%  Similarity=0.099  Sum_probs=38.7

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCc
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCP  449 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  449 (488)
                      .|+++|.+++||+|++|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4777888889999999999999999999999999999999873

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.9e-11  Score=78.81  Aligned_cols=44  Identities=14%  Similarity=0.114  Sum_probs=38.6

Q ss_pred             hhhhhccCCccccc--ccccccCChHHHHHHHHhhcCCCCcCCcch
Q psy16834        408 HLIQVHPAQKHQCH--ICNKIVVSEKTLKKHLLLHTNSEPFHCPEC  451 (488)
Q Consensus       408 H~~~~h~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  451 (488)
                      |.++|.+++||+|+  +|++.|.++..|..|+++|++++||+|++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44566788899998  899999999999999999999999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.6e-11  Score=77.81  Aligned_cols=42  Identities=17%  Similarity=0.198  Sum_probs=37.1

Q ss_pred             hhhhccCCcccccccccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        409 LIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       409 ~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      .++|.+++||+|++|++.|.++..|..|+++|++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            345677889999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=7.8e-11  Score=73.83  Aligned_cols=38  Identities=24%  Similarity=0.328  Sum_probs=33.1

Q ss_pred             hhccCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        411 QVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       411 ~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      +|.+++||+|++|++.|.++..|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45677889999999999999999999999999999987

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.01  E-value=5.9e-11  Score=72.52  Aligned_cols=36  Identities=28%  Similarity=0.561  Sum_probs=28.4

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |+++|+|++||+|++|+++|.+++.|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567788888888888888888888888888887764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=5.9e-11  Score=72.51  Aligned_cols=36  Identities=22%  Similarity=0.522  Sum_probs=23.2

Q ss_pred             HhhcCCCCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        438 LLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      ++|++++||.|++||++|.++++|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            456666666666666666666666666666666543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.95  E-value=1.7e-10  Score=71.37  Aligned_cols=35  Identities=20%  Similarity=0.417  Sum_probs=19.9

Q ss_pred             cCCcccccccccccCChHHHHHHHHhhcCCCCcCC
Q psy16834        414 PAQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHC  448 (488)
Q Consensus       414 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  448 (488)
                      +++||.|++|++.|.+.+.|..|+++|+|++||.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            44555555555555555555555555555555544

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=5.3e-11  Score=85.52  Aligned_cols=67  Identities=21%  Similarity=0.238  Sum_probs=57.9

Q ss_pred             hHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        374 CNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       374 ~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      .+|..|++ .|.+.+++.|+.|++.|. .+.|..|+ .+.+++||.|+.|++.|. ...|..|+++|++++
T Consensus         3 ~~L~~H~~-~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEE-TECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCC-CCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCc-ccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            45777865 588999999999999994 99999998 788899999999999887 589999999998864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.90  E-value=7.8e-10  Score=68.27  Aligned_cols=38  Identities=16%  Similarity=0.305  Sum_probs=33.2

Q ss_pred             hcCCCCcCCcchhhccCChhhHhccccccccCcCccccc
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCK  478 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~  478 (488)
                      |++++||.|++||++|.+.+.|..|+++|++++| |.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA-RLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT-TTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcc-ceec
Confidence            6789999999999999999999999999999987 8763

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=3.8e-10  Score=76.61  Aligned_cols=38  Identities=18%  Similarity=0.330  Sum_probs=26.6

Q ss_pred             hccCCcccccc--cccccCChHHHHHHH-HhhcCCCCcCCc
Q psy16834        412 VHPAQKHQCHI--CNKIVVSEKTLKKHL-LLHTNSEPFHCP  449 (488)
Q Consensus       412 ~h~~~~~~C~~--C~k~f~~~~~L~~H~-~~H~~~~~~~C~  449 (488)
                      ..+++||+|+.  |+++|...+.|++|+ ++|++++||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            35667777754  777777777777776 567777777774

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.89  E-value=3.4e-10  Score=68.05  Aligned_cols=34  Identities=29%  Similarity=0.560  Sum_probs=22.8

Q ss_pred             hcCCCCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      |+|++||.|++||++|.+++.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5666666666676666666666666666666543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.89  E-value=3e-10  Score=68.25  Aligned_cols=33  Identities=24%  Similarity=0.364  Sum_probs=19.6

Q ss_pred             hcCCCCcCCcchhhccCChhhHhccccccccCc
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      |+|++||.|++|+++|.++++|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            555566666666666666666666666665554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.87  E-value=1.5e-09  Score=64.09  Aligned_cols=32  Identities=28%  Similarity=0.389  Sum_probs=25.7

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCCcC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNSEPFH  447 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~  447 (488)
                      +||+|++|++.|.+...|..|+++|+|++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46788888888888888888888888888875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=5e-10  Score=68.01  Aligned_cols=32  Identities=22%  Similarity=0.404  Sum_probs=17.1

Q ss_pred             hcCCCCcCCcc--hhhccCChhhHhccccccccC
Q psy16834        440 HTNSEPFHCPE--CGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       440 H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      ++|++||+|++  |+++|.+++.|+.|+++|+|+
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34555555543  555555555555555555543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.84  E-value=3.4e-11  Score=89.33  Aligned_cols=56  Identities=14%  Similarity=0.186  Sum_probs=48.2

Q ss_pred             hcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhhcC
Q psy16834        383 YHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       383 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      .|+++++|.|++||+.|...+.|..|+++|++++||+|..|.    ....|..|.++|+|
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            588899999999999999999999999998889999997654    46677788888887

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=2.3e-09  Score=72.76  Aligned_cols=40  Identities=23%  Similarity=0.475  Sum_probs=33.2

Q ss_pred             hhcCCCCcCCcc--hhhccCChhhHhccc-cccccCcCcccccc
Q psy16834        439 LHTNSEPFHCPE--CGKAFKFKRYVTLHM-RTHTGNWPTFVCKI  479 (488)
Q Consensus       439 ~H~~~~~~~C~~--C~~~F~~~~~L~~H~-~~H~~~~~~~~C~~  479 (488)
                      ..+|+|||+|++  |+++|.++++|..|+ ++|++++| |.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-ccccc
Confidence            367899999975  999999999999997 57999988 77753

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.9e-09  Score=65.55  Aligned_cols=36  Identities=14%  Similarity=0.338  Sum_probs=29.6

Q ss_pred             hhhccCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy16834        410 IQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEP  445 (488)
Q Consensus       410 ~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  445 (488)
                      ++|.+++||+|++|++.|.++..|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            345677888888888888888888888888888875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=4.6e-10  Score=68.41  Aligned_cols=34  Identities=15%  Similarity=0.312  Sum_probs=23.7

Q ss_pred             HhhcCCCCcCCcchhhccCChhhHhcc-ccccccC
Q psy16834        438 LLHTNSEPFHCPECGKAFKFKRYVTLH-MRTHTGN  471 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~~~L~~H-~~~H~~~  471 (488)
                      ++|+|++||+|+.||++|.+++.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            456777777777777777777777777 6666654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.77  E-value=3.8e-09  Score=64.18  Aligned_cols=36  Identities=17%  Similarity=0.167  Sum_probs=29.9

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcCC
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      |++.|.+++||+|++|++.|.++..|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            667777888888888888888888888888888875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.5e-09  Score=65.58  Aligned_cols=33  Identities=21%  Similarity=0.339  Sum_probs=22.6

Q ss_pred             hhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        439 LHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       439 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      .|++++||.|++|+++|.+++.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            466667777777777777777777777776665

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1.1e-09  Score=66.60  Aligned_cols=34  Identities=21%  Similarity=0.394  Sum_probs=22.9

Q ss_pred             HhhcCCCCcCCcchhhccCCh-hhHhccccccccC
Q psy16834        438 LLHTNSEPFHCPECGKAFKFK-RYVTLHMRTHTGN  471 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~-~~L~~H~~~H~~~  471 (488)
                      ++|++++||.|++|+++|.++ +.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            356666777777777777776 6777777766664

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.74  E-value=5.3e-09  Score=62.62  Aligned_cols=34  Identities=21%  Similarity=0.296  Sum_probs=28.5

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEP  445 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  445 (488)
                      |.+++||.|++|++.|.++..|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4567788888888888888888889888888875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.72  E-value=6.7e-09  Score=62.18  Aligned_cols=34  Identities=21%  Similarity=0.425  Sum_probs=28.6

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSEP  445 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  445 (488)
                      |.+++||+|++|++.|.++..|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4567788888888888888888999888888875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=2.1e-09  Score=64.92  Aligned_cols=33  Identities=33%  Similarity=0.803  Sum_probs=20.0

Q ss_pred             hhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        439 LHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       439 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +|++++||.|++|+++|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            355666666666666666666666666666554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.72  E-value=3e-09  Score=62.82  Aligned_cols=32  Identities=28%  Similarity=0.359  Sum_probs=30.1

Q ss_pred             CCcCCcchhhccCChhhHhccccccccCcCccc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFV  476 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~  476 (488)
                      +||.|++||++|.+.++|..|+++|+|++| |.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE-ER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC-CC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC-CC
Confidence            589999999999999999999999999987 74

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=2.1e-09  Score=64.90  Aligned_cols=33  Identities=27%  Similarity=0.541  Sum_probs=20.3

Q ss_pred             hhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        439 LHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       439 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      .|++++||+|++|+++|.+.+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            355666666666666666666666666666554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.71  E-value=2.4e-09  Score=69.45  Aligned_cols=35  Identities=23%  Similarity=0.506  Sum_probs=26.1

Q ss_pred             hhcCCCCcCCcchhhccCChhhHhcccc-ccccCcC
Q psy16834        439 LHTNSEPFHCPECGKAFKFKRYVTLHMR-THTGNWP  473 (488)
Q Consensus       439 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~  473 (488)
                      +|+|++||.|++||++|.++.+|..|++ +|+|+.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4788888888888888888888888888 8887754

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=2.5e-09  Score=65.46  Aligned_cols=33  Identities=21%  Similarity=0.318  Sum_probs=17.9

Q ss_pred             cCCccccc--ccccccCChHHHHHHHHhhcCCCCc
Q psy16834        414 PAQKHQCH--ICNKIVVSEKTLKKHLLLHTNSEPF  446 (488)
Q Consensus       414 ~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~  446 (488)
                      +++||+|+  .|++.|.++..|++|+++|++++||
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            44555555  3555555555555555555555554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=8.8e-09  Score=62.44  Aligned_cols=33  Identities=21%  Similarity=0.346  Sum_probs=28.1

Q ss_pred             hccCCcccccc--cccccCChHHHHHHHHhhcCCC
Q psy16834        412 VHPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +++++||+|++  |+++|.+++.|++|+++|+|+.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            46778999986  9999999999999999999863

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=4.6e-09  Score=63.36  Aligned_cols=32  Identities=31%  Similarity=0.524  Sum_probs=18.0

Q ss_pred             hcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |++++||.|++|++.|.++..|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            45555555555555555555555555555554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.67  E-value=3e-09  Score=62.31  Aligned_cols=30  Identities=27%  Similarity=0.427  Sum_probs=24.4

Q ss_pred             CCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      +||.|++||++|.++++|..|+++|++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            478888888888888888888888888776

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.66  E-value=3.6e-09  Score=63.10  Aligned_cols=26  Identities=27%  Similarity=0.475  Sum_probs=16.9

Q ss_pred             hcCCCCcCCcchhhccCChhhHhccc
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHM  465 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~  465 (488)
                      ++||+||.|++||++|+++++|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            35666666666666666666666666

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.3e-08  Score=62.19  Aligned_cols=35  Identities=26%  Similarity=0.642  Sum_probs=30.7

Q ss_pred             hcCCCCcCCc--chhhccCChhhHhccccccccCcCcc
Q psy16834        440 HTNSEPFHCP--ECGKAFKFKRYVTLHMRTHTGNWPTF  475 (488)
Q Consensus       440 H~~~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~  475 (488)
                      |+|++||.|+  .|+++|.+.++|..|+++|++++| |
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK-F   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT-T
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC-C
Confidence            6788999999  499999999999999999998876 5

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=6.9e-09  Score=62.57  Aligned_cols=32  Identities=38%  Similarity=0.756  Sum_probs=16.5

Q ss_pred             hcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |++++||.|++|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            44455555555555555555555555555443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.59  E-value=1.2e-09  Score=70.60  Aligned_cols=35  Identities=26%  Similarity=0.537  Sum_probs=19.7

Q ss_pred             HHhhcCCCCcCCc--chhhccCChhhHhccccccccC
Q psy16834        437 LLLHTNSEPFHCP--ECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       437 ~~~H~~~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +.+|+|++||.|+  .||++|.++++|..|+++|+|+
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3445555555553  4555555555555555555554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.59  E-value=1.9e-09  Score=63.18  Aligned_cols=32  Identities=19%  Similarity=0.275  Sum_probs=27.7

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCCcC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNSEPFH  447 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~  447 (488)
                      +||+|++|++.|.+++.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            47889999999999999999999999998873

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2.3e-08  Score=60.20  Aligned_cols=33  Identities=24%  Similarity=0.468  Sum_probs=27.2

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      |.+++||+|++|++.|..+..|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            466778888888888888888888888888764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.58  E-value=8.6e-09  Score=62.60  Aligned_cols=32  Identities=28%  Similarity=0.535  Sum_probs=16.9

Q ss_pred             hcCCCCcCCcc--hhhccCChhhHhccccccccC
Q psy16834        440 HTNSEPFHCPE--CGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       440 H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |+|++||.|++  ||++|.+++.|..|+++|+|+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            44555555553  555555555555555555544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.4e-08  Score=59.45  Aligned_cols=33  Identities=21%  Similarity=0.457  Sum_probs=26.7

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      |.+++||+|++|++.|.+...|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            466778888888888888888888888888764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.5e-08  Score=59.34  Aligned_cols=33  Identities=21%  Similarity=0.338  Sum_probs=26.9

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      |.+++||+|++|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            456778888888888888888888888888764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.4e-08  Score=58.90  Aligned_cols=33  Identities=39%  Similarity=0.618  Sum_probs=26.3

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +.+++||.|++|++.|.++..|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            456678888888888888888888888888764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=2.4e-08  Score=60.57  Aligned_cols=34  Identities=15%  Similarity=0.420  Sum_probs=25.3

Q ss_pred             hhccCCcccccccccccCCh-HHHHHHHHhhcCCC
Q psy16834        411 QVHPAQKHQCHICNKIVVSE-KTLKKHLLLHTNSE  444 (488)
Q Consensus       411 ~~h~~~~~~C~~C~k~f~~~-~~L~~H~~~H~~~~  444 (488)
                      +|.+++||+|++|++.|.++ ..|..|+++|+|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            34566777888888888887 78888888887764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=3.1e-08  Score=68.25  Aligned_cols=30  Identities=23%  Similarity=0.465  Sum_probs=15.4

Q ss_pred             cCCcccccccccccCChHHHHHHHHhhcCC
Q psy16834        414 PAQKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       414 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      .++||+|++|++.|.++..|++|+++|+++
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            344555555555555555555555555543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=3.1e-08  Score=60.07  Aligned_cols=34  Identities=21%  Similarity=0.382  Sum_probs=27.4

Q ss_pred             hhhccCCcccccccccccCChHHHHHH-HHhhcCC
Q psy16834        410 IQVHPAQKHQCHICNKIVVSEKTLKKH-LLLHTNS  443 (488)
Q Consensus       410 ~~~h~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~  443 (488)
                      ++|.+++||+|++|++.|.++..|..| +++|+|+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            345677888888888888888888888 8888875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=6.3e-08  Score=58.19  Aligned_cols=33  Identities=30%  Similarity=0.584  Sum_probs=27.2

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +.+++||+|++|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            356678888888888888888888988888864

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.46  E-value=2.9e-08  Score=63.87  Aligned_cols=40  Identities=15%  Similarity=0.376  Sum_probs=32.7

Q ss_pred             HHhhhhhhccCCccccc--ccccccCChHHHHHHHHhhcCCC
Q psy16834        405 LNEHLIQVHPAQKHQCH--ICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       405 L~~H~~~~h~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +..|...|.+++||+|+  .|++.|..++.|+.|+++|+|++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34455667888899995  69999999999999999999874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.45  E-value=6.2e-08  Score=57.68  Aligned_cols=25  Identities=24%  Similarity=0.372  Sum_probs=15.9

Q ss_pred             ccCCcccccccccccCChHHHHHHH
Q psy16834        413 HPAQKHQCHICNKIVVSEKTLKKHL  437 (488)
Q Consensus       413 h~~~~~~C~~C~k~f~~~~~L~~H~  437 (488)
                      .+++||+|++|+|+|+++++|++|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3456666666666666666666665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.44  E-value=1.4e-07  Score=53.39  Aligned_cols=27  Identities=30%  Similarity=0.668  Sum_probs=17.0

Q ss_pred             cccccccccccCChHHHHHHHHhhcCC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ||.|++|++.|.+...|..|+++|+|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.44  E-value=9.5e-08  Score=57.83  Aligned_cols=33  Identities=33%  Similarity=0.616  Sum_probs=27.0

Q ss_pred             hccCCcccccc--cccccCChHHHHHHHHhhcCCC
Q psy16834        412 VHPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +.+++||.|++  |++.|.+++.|.+|+++|+|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            45677888885  8888888888888888888874

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=1.2e-07  Score=54.05  Aligned_cols=28  Identities=21%  Similarity=0.456  Sum_probs=16.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      +||.|++|++.|.+...|..|+++|+|+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3555555555555555555555555554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.42  E-value=5e-08  Score=55.75  Aligned_cols=30  Identities=27%  Similarity=0.605  Sum_probs=28.0

Q ss_pred             CCCcCCcchhhccCChhhHhccccccccCc
Q psy16834        443 SEPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       443 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      ++||.|++||++|.....|..|+++|+|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            579999999999999999999999999863

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.42  E-value=5.3e-08  Score=55.23  Aligned_cols=27  Identities=37%  Similarity=0.648  Sum_probs=14.7

Q ss_pred             cccccccccccCChHHHHHHHHhhcCC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ||.|++|++.|.+...|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.41  E-value=9.6e-08  Score=61.69  Aligned_cols=33  Identities=24%  Similarity=0.346  Sum_probs=24.9

Q ss_pred             hccCCcccccccccccCChHHHHHHHH-hhcCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLL-LHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~  444 (488)
                      |.+++||.|++|++.|.....|..|++ +|+|+.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            456778888888888888888888888 888764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.41  E-value=1.1e-07  Score=53.90  Aligned_cols=28  Identities=39%  Similarity=0.696  Sum_probs=23.0

Q ss_pred             CCcCCcchhhccCChhhHhccccccccC
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +||.|++||++|...+.|..|+++|+|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5788888888888888888888888776

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=3.2e-08  Score=56.21  Aligned_cols=28  Identities=43%  Similarity=0.844  Sum_probs=17.2

Q ss_pred             CCcCCcchhhccCChhhHhccccccccC
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +||.|++||++|...++|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3566666666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=5.5e-08  Score=54.66  Aligned_cols=25  Identities=24%  Similarity=0.554  Sum_probs=12.5

Q ss_pred             cccccccccccCChHHHHHHHHhhc
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      ||+|++|++.|.+...|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcC
Confidence            4455555555555555555554444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=9.4e-08  Score=55.65  Aligned_cols=27  Identities=26%  Similarity=0.458  Sum_probs=13.1

Q ss_pred             ccccc--ccccccCChHHHHHHHHhhcCC
Q psy16834        417 KHQCH--ICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       417 ~~~C~--~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ||.|+  .|++.|.+...|..|+++|+|+
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            44444  4555554444455554444443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.76  E-value=3.5e-08  Score=56.51  Aligned_cols=28  Identities=32%  Similarity=0.712  Sum_probs=18.3

Q ss_pred             CCcCCcchhhccCChhhHhccccccccC
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +||.|++||++|...++|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5666666666666666666666666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.39  E-value=1.8e-07  Score=53.92  Aligned_cols=27  Identities=26%  Similarity=0.491  Sum_probs=14.8

Q ss_pred             ccccc--ccccccCChHHHHHHHHhhcCC
Q psy16834        417 KHQCH--ICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       417 ~~~C~--~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ||+|+  +||+.|.+.+.|..|+++|+|+
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.39  E-value=7.4e-08  Score=54.57  Aligned_cols=29  Identities=31%  Similarity=0.592  Sum_probs=27.1

Q ss_pred             CCcCCcchhhccCChhhHhccccccccCc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      +||.|++||++|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999863

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.38  E-value=5.1e-08  Score=54.33  Aligned_cols=24  Identities=21%  Similarity=0.412  Sum_probs=11.9

Q ss_pred             cccccccccccCChHHHHHHHHhh
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H  440 (488)
                      ||+|++||+.|..++.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            445555555555555555554444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.38  E-value=2.1e-07  Score=53.06  Aligned_cols=28  Identities=25%  Similarity=0.445  Sum_probs=15.5

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      ||+|++|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4555555555555555555555555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=1.6e-07  Score=53.11  Aligned_cols=28  Identities=29%  Similarity=0.627  Sum_probs=18.2

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      ||.|++|++.|.+...|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            5666666666666666666666666653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.37  E-value=1.1e-07  Score=54.83  Aligned_cols=29  Identities=45%  Similarity=0.784  Sum_probs=27.0

Q ss_pred             CCcCCc--chhhccCChhhHhccccccccCc
Q psy16834        444 EPFHCP--ECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       444 ~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      +||.|+  .||++|.+.+.|..|+++|+|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999873

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.37  E-value=1.1e-07  Score=52.81  Aligned_cols=26  Identities=27%  Similarity=0.655  Sum_probs=14.1

Q ss_pred             cccccccccccCChHHHHHHHHhhcC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      ||+|++|++.|.++..|..|+++|+|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35555555555555555555555554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.36  E-value=2.4e-07  Score=53.82  Aligned_cols=29  Identities=28%  Similarity=0.634  Sum_probs=24.6

Q ss_pred             CCCcCCc--chhhccCChhhHhccccccccC
Q psy16834        443 SEPFHCP--ECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       443 ~~~~~C~--~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      ++||.|+  .||++|.+.++|..|+++|+|+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4788888  7888888888888888888876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.36  E-value=2e-07  Score=51.67  Aligned_cols=27  Identities=26%  Similarity=0.588  Sum_probs=20.7

Q ss_pred             CcCCcchhhccCChhhHhccccccccC
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      ||.|++||++|.+++.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            578888888888888888888888764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.36  E-value=9.7e-08  Score=54.50  Aligned_cols=30  Identities=13%  Similarity=0.276  Sum_probs=27.9

Q ss_pred             CCcCCcchhhccCChhhHhccccccccCcC
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGNWP  473 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  473 (488)
                      +||.|++||++|...+.|..|+++|+++.|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            589999999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=7.3e-08  Score=53.61  Aligned_cols=25  Identities=24%  Similarity=0.503  Sum_probs=13.8

Q ss_pred             CcccccccccccCChHHHHHHHHhh
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H  440 (488)
                      +||+|++||+.|.+...|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3555555555555555555555554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=2e-07  Score=52.65  Aligned_cols=27  Identities=33%  Similarity=0.623  Sum_probs=14.3

Q ss_pred             cccccccccccCChHHHHHHHHhhcCC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ||.|++|++.|.+...|..|+++|+|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.9e-08  Score=55.06  Aligned_cols=29  Identities=28%  Similarity=0.533  Sum_probs=23.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +||+|++|++.|.+...|..|+++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            36888888888888888888888888764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=9.8e-08  Score=53.99  Aligned_cols=29  Identities=24%  Similarity=0.597  Sum_probs=27.2

Q ss_pred             CCcCCcchhhccCChhhHhccccccccCc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      +||.|++||++|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999999873

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.33  E-value=2.3e-07  Score=52.01  Aligned_cols=28  Identities=43%  Similarity=0.942  Sum_probs=22.7

Q ss_pred             CCCcCCcchhhccCChhhHhcccccccc
Q psy16834        443 SEPFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       443 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      ++||.|++||++|.+.+.|..|+++|+|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4688888888888888888888888764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=9.4e-08  Score=54.08  Aligned_cols=29  Identities=38%  Similarity=0.820  Sum_probs=27.1

Q ss_pred             CCcCCcchhhccCChhhHhccccccccCc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      +||.|++||++|.....|..|+++|+|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999999873

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.30  E-value=2.3e-07  Score=51.51  Aligned_cols=27  Identities=30%  Similarity=0.671  Sum_probs=21.8

Q ss_pred             CCCcCCcchhhccCChhhHhccccccc
Q psy16834        443 SEPFHCPECGKAFKFKRYVTLHMRTHT  469 (488)
Q Consensus       443 ~~~~~C~~C~~~F~~~~~L~~H~~~H~  469 (488)
                      ++||+|++||++|.++++|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468888888888888888888888774

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=8.6e-08  Score=54.78  Aligned_cols=29  Identities=21%  Similarity=0.505  Sum_probs=23.4

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +||+|++|++.|.+...|..|+++|+|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            57888888888888888888888888764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=8.7e-08  Score=52.74  Aligned_cols=25  Identities=36%  Similarity=0.842  Sum_probs=16.7

Q ss_pred             CCcCCcchhhccCChhhHhcccccc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTH  468 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H  468 (488)
                      +||.|++||++|.+.+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3666666666666666666666665

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=3.3e-07  Score=50.82  Aligned_cols=27  Identities=33%  Similarity=0.597  Sum_probs=20.4

Q ss_pred             CCCcCCcchhhccCChhhHhccccccc
Q psy16834        443 SEPFHCPECGKAFKFKRYVTLHMRTHT  469 (488)
Q Consensus       443 ~~~~~C~~C~~~F~~~~~L~~H~~~H~  469 (488)
                      ++||.|+.||++|.+.+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467778888888888888887777764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=2.4e-07  Score=52.86  Aligned_cols=27  Identities=30%  Similarity=0.728  Sum_probs=14.5

Q ss_pred             CcCCcchhhccCChhhHhcc-ccccccC
Q psy16834        445 PFHCPECGKAFKFKRYVTLH-MRTHTGN  471 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H-~~~H~~~  471 (488)
                      ||.|+.||++|.+.+.|..| +++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45555555555555555555 4555544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.27  E-value=6.9e-07  Score=61.43  Aligned_cols=42  Identities=17%  Similarity=0.173  Sum_probs=31.6

Q ss_pred             hhcCCCCcCCcchhhccCChhhHhccccccccCcCccccccCcc
Q psy16834        439 LHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNA  482 (488)
Q Consensus       439 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~k  482 (488)
                      .|++++||+|++|+++|.+++.|..|+++|+++.  ..+.+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~--~~~~~~~~   48 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS--LQLGYIDL   48 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS--CCCCSCCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc--cccccccC
Confidence            3677888888888888888888888888888764  35555553

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=5.1e-07  Score=51.42  Aligned_cols=29  Identities=21%  Similarity=0.506  Sum_probs=22.1

Q ss_pred             CcccccccccccCChHHHHHH-HHhhcCCC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKH-LLLHTNSE  444 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H-~~~H~~~~  444 (488)
                      +||.|++|++.|.+...|..| +++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            367788888888888888888 67787764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3e-07  Score=50.47  Aligned_cols=26  Identities=27%  Similarity=0.494  Sum_probs=18.2

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      +||+|++||+.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            36777777777777777777777663

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.99  E-value=2.9e-06  Score=47.63  Aligned_cols=26  Identities=27%  Similarity=0.574  Sum_probs=15.4

Q ss_pred             ccccc--ccccccCChHHHHHHHHhhcC
Q psy16834        417 KHQCH--ICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       417 ~~~C~--~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      ||.|+  .|++.|.+.+.|..|+++|+|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            45566  666666666666666665553

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.98  E-value=1.2e-06  Score=49.37  Aligned_cols=27  Identities=33%  Similarity=0.778  Sum_probs=25.4

Q ss_pred             CCcCCc--chhhccCChhhHhcccccccc
Q psy16834        444 EPFHCP--ECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       444 ~~~~C~--~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      +||.|+  .||++|...+.|..|+++|+|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999975

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.52  E-value=7.6e-05  Score=50.91  Aligned_cols=45  Identities=20%  Similarity=0.313  Sum_probs=21.7

Q ss_pred             ccccccChhHHHHHHhhhcCCCC------CccCC--ccCCcCCCchHHHhhhh
Q psy16834        366 CEKSFARNCNLKLHIRRYHDKSD------NTECP--LCGKSFPSRGRLNEHLI  410 (488)
Q Consensus       366 C~k~F~~~~~l~~H~~~~H~~~~------~~~C~--~C~k~F~~~~~L~~H~~  410 (488)
                      |++.|.+...|..|+...|.+.+      +|.|.  .|+..+.....|..|++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            55555555555555544454433      34443  44444444444444443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.52  E-value=0.00019  Score=60.27  Aligned_cols=146  Identities=14%  Similarity=0.289  Sum_probs=92.3

Q ss_pred             CcccCCcccccccchhhHHHHHHhhcCCCccccCccccCcCCChHHHHHHHHhhhCCCCccCCCCCCccCChhhHHHHHh
Q psy16834          9 EKFSCSLCSYSVTIKRNLIMHIKRKHTDEFSILCPECGRGFFNEKELAAHKIEIHGADPFLCIPCNKPFSKIENYRLHQR   88 (488)
Q Consensus         9 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~   88 (488)
                      ..|.|++|...|..                |+.+ .||-.|-.. =+......    ....|+.|...+.....+..-..
T Consensus        17 ~~~~C~IC~~~~~~----------------pv~~-~CgH~fC~~-Ci~~~~~~----~~~~CP~Cr~~~~~~~~~~~~~~   74 (170)
T 3hcs_A           17 SKYECPICLMALRE----------------AVQT-PCGHRFCKA-CIIKSIRD----AGHKCPVDNEILLENQLFPDNFA   74 (170)
T ss_dssp             GGGBCTTTCSBCSS----------------EEEC-TTSCEEEHH-HHHHHHHH----HCSBCTTTCCBCCGGGCEECHHH
T ss_pred             CCCCCCCCChhhcC----------------cEEC-CCCCHHHHH-HHHHHHHh----CCCCCCCCccCcchhhhhhhHHH
Confidence            45889999877653                3333 367666533 22222211    12378888887765321110000


Q ss_pred             hhccCCCcccc--ccchhhccchhHHHHHHHHhcCCceecCccCccccChhhHHHHHHhccCCCceeCccccccccchhh
Q psy16834         89 RYHLNSVNKEC--KICHKVLRTARLSEHMKQVHYAKLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYY  166 (488)
Q Consensus        89 ~~h~~~~~~~C--~~C~~~f~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~F~~~~~  166 (488)
                      ..-..+....|  ..|+.......+..|... =.-.+..|+.|+..+ ....|..|+...-..++-.|+.|+..|. ...
T Consensus        75 ~~~i~~l~v~C~n~GC~~~~~~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~  151 (170)
T 3hcs_A           75 KREILSLMVKCPNEGCLHKMELRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FED  151 (170)
T ss_dssp             HHHHHTSEEECCSTTCCCEEEGGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGG
T ss_pred             HHHHhhcccCCCCCCCCceecHhHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHH
Confidence            01122344567  467777777777777632 223567899999988 6778999998888888999999999875 567


Q ss_pred             HHhHhhhccCCCC
Q psy16834        167 LTLHLRTHTGVRP  179 (488)
Q Consensus       167 L~~H~~~h~~~~~  179 (488)
                      |..|..++.|+.+
T Consensus       152 l~~H~~~~~~~~~  164 (170)
T 3hcs_A          152 KEIHDQNCPLALE  164 (170)
T ss_dssp             HHHHHTTCCC---
T ss_pred             HHhHHHhCcChhh
Confidence            8999999888754

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.45  E-value=0.00059  Score=57.17  Aligned_cols=140  Identities=19%  Similarity=0.372  Sum_probs=66.3

Q ss_pred             eeecccccccccCHHHHHhHHhhhccCCceeecCCcccCChhHHHHHHHhhccCCCcccCCCCCCccCChH-----HHHH
Q psy16834        276 NYKCEICGEEFLSKTRYNRHVVTHEEKQKFECECGYVTCNKYRLTEHVRRTHLKDYKVLCPICGYGCFRNA-----ELEE  350 (488)
Q Consensus       276 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~-----~l~~  350 (488)
                      .+.|++|...|.               .|..+.||-.|...- +...+...     ...||+|...+....     .+..
T Consensus        18 ~~~C~IC~~~~~---------------~pv~~~CgH~fC~~C-i~~~~~~~-----~~~CP~Cr~~~~~~~~~~~~~~~~   76 (170)
T 3hcs_A           18 KYECPICLMALR---------------EAVQTPCGHRFCKAC-IIKSIRDA-----GHKCPVDNEILLENQLFPDNFAKR   76 (170)
T ss_dssp             GGBCTTTCSBCS---------------SEEECTTSCEEEHHH-HHHHHHHH-----CSBCTTTCCBCCGGGCEECHHHHH
T ss_pred             CCCCCCCChhhc---------------CcEECCCCCHHHHHH-HHHHHHhC-----CCCCCCCccCcchhhhhhhHHHHH
Confidence            466777776664               245556776665432 22221111     127888877665431     1222


Q ss_pred             HHHhhcCCCcccc--ccccccccChhHHHHHHhhhcCCCCCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccC
Q psy16834        351 HFISAHSADRFKC--VFCEKSFARNCNLKLHIRRYHDKSDNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVV  428 (488)
Q Consensus       351 H~~~~~~~~~~~C--~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~  428 (488)
                      -+.    .-...|  .-|+..+. ...|..|+.  .=.-++..|+.|+..+ .+..|..|+...-+.++-.|+.|+..|.
T Consensus        77 ~i~----~l~v~C~n~GC~~~~~-~~~l~~H~~--~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~  148 (170)
T 3hcs_A           77 EIL----SLMVKCPNEGCLHKME-LRHLEDHQA--HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA  148 (170)
T ss_dssp             HHH----TSEEECCSTTCCCEEE-GGGHHHHHT--TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE
T ss_pred             HHh----hcccCCCCCCCCceec-HhHHHHHHh--cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC
Confidence            111    233455  34555544 335556642  1223445555555555 4445555554434444455555555442


Q ss_pred             ChHHHHHHHHhhcCCCC
Q psy16834        429 SEKTLKKHLLLHTNSEP  445 (488)
Q Consensus       429 ~~~~L~~H~~~H~~~~~  445 (488)
                       ...|..|..+++|+.+
T Consensus       149 -~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          149 -FEDKEIHDQNCPLALE  164 (170)
T ss_dssp             -GGGHHHHHTTCCC---
T ss_pred             -HHHHHhHHHhCcChhh
Confidence             2344555555555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.39  E-value=0.00018  Score=49.07  Aligned_cols=45  Identities=18%  Similarity=0.278  Sum_probs=22.1

Q ss_pred             ccccccchhhHHHHHHhhcCCCc------cccCc--cccCcCCChHHHHHHHH
Q psy16834         16 CSYSVTIKRNLIMHIKRKHTDEF------SILCP--ECGRGFFNEKELAAHKI   60 (488)
Q Consensus        16 C~~~f~~~~~L~~H~~~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~   60 (488)
                      |++.|.+...|..|+...|.+..      +|.|.  .|++.+.....|..|++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            55555555555555544454333      34443  44444444444444443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.85  E-value=0.00017  Score=55.55  Aligned_cols=30  Identities=17%  Similarity=0.280  Sum_probs=21.7

Q ss_pred             HhhcCCCCcCCcchhhccCChhhHhccccc
Q psy16834        438 LLHTNSEPFHCPECGKAFKFKRYVTLHMRT  467 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~  467 (488)
                      ..|+|++||.|.+|++.|.+.+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            456777777777777777777777777765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.55  E-value=0.0026  Score=50.01  Aligned_cols=77  Identities=14%  Similarity=0.192  Sum_probs=48.6

Q ss_pred             CCCccCCccCCcCCCchHHHhhh--hhhccC-Cccccccc------ccccCChHHHHHHHHhhcCCCCcCCcchhhccCC
Q psy16834        387 SDNTECPLCGKSFPSRGRLNEHL--IQVHPA-QKHQCHIC------NKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKF  457 (488)
Q Consensus       387 ~~~~~C~~C~k~F~~~~~L~~H~--~~~h~~-~~~~C~~C------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~  457 (488)
                      .+++.|.+|+..|.+.+.+..|.  +.|-.. +.+.+...      ++.+....    +...+.+.+.|-|.+|++.|..
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            36788999999999888888887  332211 23333110      22222111    2234566778888888888888


Q ss_pred             hhhHhccccc
Q psy16834        458 KRYVTLHMRT  467 (488)
Q Consensus       458 ~~~L~~H~~~  467 (488)
                      ...|..|+..
T Consensus       106 ~~~~~~H~~g  115 (127)
T 1zu1_A          106 PVVAESHYIG  115 (127)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHCC
Confidence            8888888753

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.54  E-value=0.00097  Score=52.51  Aligned_cols=76  Identities=17%  Similarity=0.286  Sum_probs=41.3

Q ss_pred             CccccccccccccChhHHHHHHh-hhcCCC-CCccCC------ccCCcCCCchHHHhhhhhhccCCcccccccccccCCh
Q psy16834        359 DRFKCVFCEKSFARNCNLKLHIR-RYHDKS-DNTECP------LCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSE  430 (488)
Q Consensus       359 ~~~~C~~C~k~F~~~~~l~~H~~-~~H~~~-~~~~C~------~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~  430 (488)
                      +++.|.+|+..|.+.+.+..|.. +.|... +.+.+.      .=++.|....    +.....+...|-|.+|++.|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            45666666666666666666652 112110 111110      0023332211    12223345678899999999999


Q ss_pred             HHHHHHHH
Q psy16834        431 KTLKKHLL  438 (488)
Q Consensus       431 ~~L~~H~~  438 (488)
                      ..|..|+.
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999974

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.89  E-value=0.0027  Score=38.64  Aligned_cols=22  Identities=27%  Similarity=0.573  Sum_probs=11.3

Q ss_pred             CcCCcchhhccCChhhHhcccc
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMR  466 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~  466 (488)
                      +|.|+.|+..|+....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4555555555555555555554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.75  E-value=0.0024  Score=49.17  Aligned_cols=31  Identities=19%  Similarity=0.278  Sum_probs=26.4

Q ss_pred             HhccCCCceeCccccccccchhhHHhHhhhc
Q psy16834        144 QLHSDDKPFECQFCRKAFKLKYYLTLHLRTH  174 (488)
Q Consensus       144 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~h  174 (488)
                      ..|+|++||.|..|++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            4578888999999999999999999998753

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.94  E-value=0.016  Score=33.03  Aligned_cols=29  Identities=28%  Similarity=0.461  Sum_probs=22.6

Q ss_pred             CcccCCcccccccchhhHHHHHHhhcCCC
Q psy16834          9 EKFSCSLCSYSVTIKRNLIMHIKRKHTDE   37 (488)
Q Consensus         9 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~   37 (488)
                      +.|.|++|.+.|.+...|..|....|..+
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            45888888888888888888887777653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.18  E-value=0.05  Score=33.17  Aligned_cols=23  Identities=17%  Similarity=0.348  Sum_probs=15.5

Q ss_pred             CcccCCcccccccchhhHHHHHH
Q psy16834          9 EKFSCSLCSYSVTIKRNLIMHIK   31 (488)
Q Consensus         9 ~~~~C~~C~~~f~~~~~L~~H~~   31 (488)
                      .+|.|+-|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            55667777777776777777764

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=92.45  E-value=0.025  Score=38.71  Aligned_cols=20  Identities=35%  Similarity=0.577  Sum_probs=13.2

Q ss_pred             ccccchhhccchhHHHHHHH
Q psy16834         98 ECKICHKVLRTARLSEHMKQ  117 (488)
Q Consensus        98 ~C~~C~~~f~~~~l~~h~~~  117 (488)
                      +|++||.......|.+.|..
T Consensus        10 ~~PlCG~~L~W~eLIeQML~   29 (95)
T 2k5c_A           10 KCPICGSPLKWEELIEEMLI   29 (95)
T ss_dssp             ECSSSCCEECHHHHHHHSTT
T ss_pred             cCCcCCCccCHHHHHHHHHh
Confidence            57777777776666665543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.63  E-value=0.14  Score=29.22  Aligned_cols=24  Identities=33%  Similarity=0.490  Sum_probs=9.9

Q ss_pred             cccccccccccChhHHHHHHhhhc
Q psy16834        361 FKCVFCEKSFARNCNLKLHIRRYH  384 (488)
Q Consensus       361 ~~C~~C~k~F~~~~~l~~H~~~~H  384 (488)
                      |.|++|-+.|.+...|..|....|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            334444444444444444433333

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.06  E-value=0.07  Score=36.82  Aligned_cols=38  Identities=29%  Similarity=0.607  Sum_probs=16.6

Q ss_pred             eecCccCccccChhhHHHHHHhccCCCceeCcccccccc
Q psy16834        124 FDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFK  162 (488)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C~~~F~  162 (488)
                      |.|+.||.++. +..|..|...=.+...|.|-.|++.|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            44444443333 233444443322333455555555554

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=89.24  E-value=0.32  Score=26.60  Aligned_cols=26  Identities=42%  Similarity=0.735  Sum_probs=21.7

Q ss_pred             cccccccccccChhHHHHHHhhhcCC
Q psy16834        361 FKCVFCEKSFARNCNLKLHIRRYHDK  386 (488)
Q Consensus       361 ~~C~~C~k~F~~~~~l~~H~~~~H~~  386 (488)
                      -.|..|.|.|....+|..|++..|..
T Consensus        10 qhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            45888999999999999999877754

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=88.96  E-value=0.27  Score=26.88  Aligned_cols=26  Identities=31%  Similarity=0.583  Sum_probs=22.1

Q ss_pred             ccCCcccccccchhhHHHHHHhhcCC
Q psy16834         11 FSCSLCSYSVTIKRNLIMHIKRKHTD   36 (488)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~~h~~   36 (488)
                      --|.+|.+.+....+|..|++..|..
T Consensus        10 qhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            46999999999999999999877753

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=84.82  E-value=0.21  Score=34.19  Aligned_cols=14  Identities=21%  Similarity=0.757  Sum_probs=9.3

Q ss_pred             ccccccCccccccC
Q psy16834        474 TFVCKICNATISSE  487 (488)
Q Consensus       474 ~~~C~~C~k~f~~~  487 (488)
                      .|+||.||..|--+
T Consensus        51 ~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           51 VFKCPVCGEEFYGK   64 (95)
T ss_dssp             EEECTTTCCEEETT
T ss_pred             hhcCCCccHHHhcc
Confidence            37777777776543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.71  E-value=0.67  Score=26.44  Aligned_cols=24  Identities=25%  Similarity=0.445  Sum_probs=14.9

Q ss_pred             CCCcccCCcccccccchhhHHHHH
Q psy16834          7 DTEKFSCSLCSYSVTIKRNLIMHI   30 (488)
Q Consensus         7 ~~~~~~C~~C~~~f~~~~~L~~H~   30 (488)
                      +..++.|..|+.+|....+++.|.
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHH
T ss_pred             ccCcCeeccccceehhhHHHhhhh
Confidence            344566666666666666666664

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.43  E-value=0.35  Score=33.37  Aligned_cols=52  Identities=25%  Similarity=0.432  Sum_probs=32.6

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcccccccc
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      .|.|+.||.++. +..|..|...=.+-..|.|--|++.|.. ..++.|..-=+.
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~HtsCISE   61 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVKCISE   61 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCCCCSC
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEeeeCCh
Confidence            467777776654 4456777655444456778778888874 556666544333

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=82.96  E-value=0.39  Score=29.18  Aligned_cols=29  Identities=24%  Similarity=0.621  Sum_probs=15.2

Q ss_pred             cCCcchhhccCChhhHhccccccccCcCccccccCccc
Q psy16834        446 FHCPECGKAFKFKRYVTLHMRTHTGNWPTFVCKICNAT  483 (488)
Q Consensus       446 ~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~C~~C~k~  483 (488)
                      |.|--||+.|+....         .-.|...|++||-.
T Consensus         4 Y~C~rCg~~fs~~el---------~~lP~IrCpyCGyr   32 (48)
T 4ayb_P            4 YRCGKCWKTFTDEQL---------KVLPGVRCPYCGYK   32 (48)
T ss_dssp             -CCCCTTTTCCCCCS---------CCCSSSCCTTTCCS
T ss_pred             EEeeccCCCccHHHH---------hhCCCcccCccCcE
Confidence            666677776664321         11244567777653

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=82.37  E-value=0.18  Score=35.24  Aligned_cols=24  Identities=25%  Similarity=0.675  Sum_probs=9.7

Q ss_pred             HHHHHHhccCCCceeCcccccccc
Q psy16834        139 YKKHMQLHSDDKPFECQFCRKAFK  162 (488)
Q Consensus       139 l~~H~~~H~~~~~~~C~~C~~~F~  162 (488)
                      |..|+...-..++..|..|+..|.
T Consensus        32 l~~H~~~~C~~r~v~C~~C~~~~~   55 (76)
T 2yuc_A           32 LPAHLQHDCPKRRLKCEFCGCDFS   55 (76)
T ss_dssp             STTTTTTSCTTSCCCCSSSCCCCC
T ss_pred             HHhhCHhhCCCcceECCCCCCccC
Confidence            333333333334444444444443

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.37  E-value=1.2  Score=28.03  Aligned_cols=21  Identities=33%  Similarity=0.922  Sum_probs=17.8

Q ss_pred             ccCCccCCcCCCchHHHhhhh
Q psy16834        390 TECPLCGKSFPSRGRLNEHLI  410 (488)
Q Consensus       390 ~~C~~C~k~F~~~~~L~~H~~  410 (488)
                      -.|.+||..|..+..|+.|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            579999999998888888874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	488
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	6e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	7e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.001
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.002
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.004
d2dmda3	29	g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {	0.004

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
           H+  +P+ C ECGKAF     +  H R HTG
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 4e-06
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
           HS +KP+ C  C KAF     L  H R HTG
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 147 SDDKPFECQFCRKAFKLKYYLTLHLR-THTGVRPMFECDI 185
           S  KP+ CQ C K F    +L  H++  HT  RP  +C +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 445 PFHCPECGKAFKFKRYVTLHMR-THTGNWPTFVCKI 479
           P+ C  CGK F    ++  H++  HT   P   C++
Sbjct: 5   PYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQV 39

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 8e-06
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 141 KHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
           +      + + ++C  C K+F     L+ H RTHTG
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 6e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
           +          + C ECGK+F     ++ H RTHTG
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 445 PFHCPECGKAFKFKRYVTLHMRTHTG 470
           PF C  C + F    ++T H+RTHTG
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (89), Expect = 6e-05
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query: 150 KPFECQFCRKAFKLKYYLTLHLRTHTG 176
           KPF+C+ C + F    +LT H+RTHTG
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 445 PFHCPECGKAFKFKRYVTLHMRTHTG 470
            F C  C +AF  + ++  H R+HT 
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTN 27

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.0 bits (89), Expect = 6e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 150 KPFECQFCRKAFKLKYYLTLHLRTHTG 176
           + F C+ C +AF  + +L  H R+HT 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTN 27

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (91), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 142 HMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTHTGV 177
             +  +  KPF+C  C ++F    +L LH + H  V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 0.001
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
                T  +PF CP+C ++F    ++ LH + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (88), Expect = 7e-05
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN 471
            +   PF C  C  AF  K     H++ HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (85), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
            S  +PF C+ C  AF  K     HL+ HT 
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTG 470
           HT  +P+ C  C K F+ K+ + +H + +  
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLHLRTHTG 176
           H+ +KP+ C  C K F+ K  L +H + +  
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 445 PFHCPECGKAFKFKRYVTLHMRTHTG 470
            F CPEC K F    +++ H++TH  
Sbjct: 2   KFACPECPKRFMRSDHLSKHIKTHQN 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 150 KPFECQFCRKAFKLKYYLTLHLRTHTGVR 178
           K F C  C K F    +L+ H++TH   +
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (80), Expect = 7e-04
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 445 PFHCPECGKAFKFKRYVTLHMRTHT 469
           P+ C ECGKAF     +  H R HT
Sbjct: 2   PYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.001
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 150 KPFECQFCRKAFKLKYYLTLHLRTHT 175
           KP++C  C KAF     L  H R HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 9e-04
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 122 KLFDCHICGKTVVTEKNYKKHMQLHSDDKPFECQFCRKAFKLKYYLTLHLRTH 174
           KL+ C  CGK+   +    +HM +H   +P+ C  C K FK+K++L  H++ H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 423 CNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTH 468
           C K    +    +H+ +H    P+ C  CGK FK K ++  HM+ H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 0.001
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 440 HTNSEPFHCPECGKAFKFKRYVTLH-MRTHTGN 471
           H+  +P+ C  C   F     + +H ++ HT N
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 146 HSDDKPFECQFCRKAFKLKYYLTLH-LRTHTG 176
           HS +KP+EC  C   F     + +H L+ HT 
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 0.001
 Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 153 ECQFCRKAFKLKYYLTLHLRTHTGVRPMFECD 184
               C K+F  K +L  H++ H+  R  + C+
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRD-YICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)

Query: 446 FHCPE--CGKAFKFKRYVTLHMRTHTGNWPTFVCK 478
           F CPE  CGK+F FK+++  HM+ H+     ++C+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICE 35

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 150 KPFEC--QFCRKAFKLKYYLTLHLRTHTG 176
           KP +C  + CRK++     L  HLR+HTG
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 445 PFHCPE--CGKAFKFKRYVTLHMRTHTG 470
           P  C    C K++     +  H+R+HTG
Sbjct: 2   PHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 445 PFHC--PECGKAFKFKRYVTLHMRTHTG 470
           PF C    CGK F     +  H RTHTG
Sbjct: 2   PFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 150 KPFECQF--CRKAFKLKYYLTLHLRTHTGVR 178
           +PF C +  C K F     L  H RTHTG +
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 150 KPFECQF--CRKAFKLKYYLTLHLRTHTG 176
           +P+ C    C + F     LT H+R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 445 PFHCPE--CGKAFKFKRYVTLHMRTHTG 470
           P+ CP   C + F     +T H+R HTG
Sbjct: 2   PYACPVESCDRRFSRSADLTRHIRIHTG 29

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 0.004
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 149 DKPFECQFCRKAFKLKYYLTLHLRTHTG 176
           ++PF+CQ C  A +    LT+HLR+HTG
Sbjct: 1   ERPFKCQICPYASRNSSQLTVHLRSHTG 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	488
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.74
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.63
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.48
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.45
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.38
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.34
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.33
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.3
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.29
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.25
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.24
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.22
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.22
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.19
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.18
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.18
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.14
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.11
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.11
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.11
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.09
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.02
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.0
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.98
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.98
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.96
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.96
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.95
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.92
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.77
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.74
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.7
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.7
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.64
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.63
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.62
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.42
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.4
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.29
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.17
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.1
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.1
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.07
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.05
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.9
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.82
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.8
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.71
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.71
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.69
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.67
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.64
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.59
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.59
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.45
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.45
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.45
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.41
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.4
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.37
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.36
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.27
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.22
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.17
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.17
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.16
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.07
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.05
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.01
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.99
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.97
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.95
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.93
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.89
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.55
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.42
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.37
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.3
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.04
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.02
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.01
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.89
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.81
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.71
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.51
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.34
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.34
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.2
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.31
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.07
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.16
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.93
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.77
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.72
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.3
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.8
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.21
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.2
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.13
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.63
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.53
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.07
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.84
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.65
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.58
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.54
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.33
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	86.69
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.64
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.47
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	85.73
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.16
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	82.46
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.48

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3e-19  Score=117.15  Aligned_cols=53  Identities=30%  Similarity=0.674  Sum_probs=50.1

Q ss_pred             CCcccccccccccCChHHHHHHHHhhcCCCCcCCcchhhccCChhhHhcccccc
Q psy16834        415 AQKHQCHICNKIVVSEKTLKKHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTH  468 (488)
Q Consensus       415 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H  468 (488)
                      ++||+|+ ||++|..+.+|+.|+++|+|++||.|++||++|.+.++|..||++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5799995 9999999999999999999999999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.5e-17  Score=106.14  Aligned_cols=52  Identities=25%  Similarity=0.515  Sum_probs=27.1

Q ss_pred             CCccCCccCCcCCCchHHHhhhhhhccCCcccccccccccCChHHHHHHHHhh
Q psy16834        388 DNTECPLCGKSFPSRGRLNEHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       388 ~~~~C~~C~k~F~~~~~L~~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H  440 (488)
                      +||.|+ ||++|...+.|..|+++|.+++||+|++||++|.+.+.|..||++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            445552 5555555555555555555555555555555555555555555544

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.3e-15  Score=90.29  Aligned_cols=37  Identities=32%  Similarity=0.666  Sum_probs=32.1

Q ss_pred             HHHHhhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        435 KHLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       435 ~H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +|+++|++++||+|++||++|.++++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778888888999988999999888999998888886

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.8e-14  Score=84.93  Aligned_cols=37  Identities=24%  Similarity=0.499  Sum_probs=28.2

Q ss_pred             cCCcccccccccccCChHHHHHHHH-hhcCCCCcCCcc
Q psy16834        414 PAQKHQCHICNKIVVSEKTLKKHLL-LHTNSEPFHCPE  450 (488)
Q Consensus       414 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~  450 (488)
                      .++||+|++||++|..+++|++||+ +|+||+||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3577888888888888888888865 688888888864

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=6.8e-15  Score=83.14  Aligned_cols=33  Identities=42%  Similarity=0.902  Sum_probs=28.0

Q ss_pred             hhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        439 LHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       439 ~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +|||||||+|++||++|.++++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588888888888888888888888888888876

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=2.7e-14  Score=83.88  Aligned_cols=35  Identities=29%  Similarity=0.598  Sum_probs=30.8

Q ss_pred             HHHhhcCCCCcCCcchhhccCChhhHhcccccccc
Q psy16834        436 HLLLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       436 H~~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      |.|+|||||||+|++||++|.++++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67889999999999999999999999999998864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3.1e-14  Score=83.00  Aligned_cols=34  Identities=26%  Similarity=0.683  Sum_probs=30.4

Q ss_pred             HhhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        438 LLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |+||||+||+|++||++|.++++|..||++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5799999999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.3e-13  Score=79.45  Aligned_cols=38  Identities=26%  Similarity=0.580  Sum_probs=32.5

Q ss_pred             CCCccccccccccccChhHHHHHHhhhcCCCCCccCCc
Q psy16834        357 SADRFKCVFCEKSFARNCNLKLHIRRYHDKSDNTECPL  394 (488)
Q Consensus       357 ~~~~~~C~~C~k~F~~~~~l~~H~~~~H~~~~~~~C~~  394 (488)
                      .++||+|++||++|.+.++|++||+++|++++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            36788999999999999999999887899999998875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=1.2e-13  Score=79.14  Aligned_cols=32  Identities=31%  Similarity=0.598  Sum_probs=27.0

Q ss_pred             hcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        440 HTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       440 H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |||||||+|++|+++|+++++|+.||++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68888888888888888888888888888765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=3.4e-13  Score=79.72  Aligned_cols=37  Identities=24%  Similarity=0.346  Sum_probs=32.5

Q ss_pred             hhhhhhccCCcccccccccccCChHHHHHHHHhhcCC
Q psy16834        407 EHLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       407 ~H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      +|+++|.+++||.|++|||+|...++|.+|+++||||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778888888999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.5e-13  Score=79.84  Aligned_cols=34  Identities=18%  Similarity=0.455  Sum_probs=28.8

Q ss_pred             HhhcCCCCcCCcchhhccCChhhHhccccccccC
Q psy16834        438 LLHTNSEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       438 ~~H~~~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |+||||+||+|++||++|+++++|+.|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5799999999999999999999999998664443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.5e-12  Score=73.39  Aligned_cols=33  Identities=21%  Similarity=0.290  Sum_probs=28.0

Q ss_pred             hhccCCcccccccccccCChHHHHHHHHhhcCC
Q psy16834        411 QVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       411 ~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      +|++++||+|++||++|..++.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            367788888888888888888888999999886

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.24  E-value=1.8e-12  Score=70.93  Aligned_cols=29  Identities=28%  Similarity=0.653  Sum_probs=17.4

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +||+|++|+++|+.++.|++||++|||||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35666666666666666666666666654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.22  E-value=1.2e-12  Score=71.64  Aligned_cols=29  Identities=31%  Similarity=0.592  Sum_probs=27.9

Q ss_pred             CCcCCcchhhccCChhhHhccccccccCc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      |||+|++||++|++++.|..||++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.3e-12  Score=74.37  Aligned_cols=33  Identities=30%  Similarity=0.609  Sum_probs=28.6

Q ss_pred             ccccc--cccccCChHHHHHHHHhhcCCCCcCCcc
Q psy16834        418 HQCHI--CNKIVVSEKTLKKHLLLHTNSEPFHCPE  450 (488)
Q Consensus       418 ~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~  450 (488)
                      |.|++  ||++|.++..|++||++|+||+||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67877  9999999999999999999999999873

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=6e-13  Score=71.77  Aligned_cols=28  Identities=43%  Similarity=0.842  Sum_probs=13.9

Q ss_pred             CCCcCCcchhhccCChhhHhcccccccc
Q psy16834        443 SEPFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       443 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      ||||+|++||++|+++++|..||++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3455555555555555555555555443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.19  E-value=1.7e-13  Score=84.87  Aligned_cols=38  Identities=26%  Similarity=0.505  Sum_probs=20.6

Q ss_pred             HHHHHHhhcCCCCcCCcc--hhhccCChhhHhccccccccC
Q psy16834        433 LKKHLLLHTNSEPFHCPE--CGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       433 L~~H~~~H~~~~~~~C~~--C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |..|++ |+||+||.|++  |+++|+++++|..|+++|+||
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            334442 55555555554  555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=2.7e-12  Score=69.99  Aligned_cols=28  Identities=32%  Similarity=0.568  Sum_probs=14.9

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      ||.|++|||+|+.++.|.+|+++|+|||
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            4555555555555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=5.6e-12  Score=68.72  Aligned_cols=29  Identities=34%  Similarity=0.697  Sum_probs=26.3

Q ss_pred             CCcCCcchhhccCChhhHhccccccccCc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      |||.|++||++|.++++|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999874

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=7.1e-12  Score=67.50  Aligned_cols=28  Identities=29%  Similarity=0.552  Sum_probs=25.6

Q ss_pred             CCcccccccccccCChHHHHHHHHhhcC
Q psy16834        415 AQKHQCHICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       415 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      ++||+|++|+|+|+.++.|.+||++|||
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5799999999999999999999999987

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=1.5e-11  Score=70.23  Aligned_cols=33  Identities=21%  Similarity=0.433  Sum_probs=27.3

Q ss_pred             hccCCcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        412 VHPAQKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       412 ~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +++++||+|++|+|.|+++++|++||++|+++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            467888888888888888888888888888753

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.7e-11  Score=71.14  Aligned_cols=33  Identities=15%  Similarity=0.270  Sum_probs=22.4

Q ss_pred             hhccCCcccccccccccCChHHHHHHHHhhcCC
Q psy16834        411 QVHPAQKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       411 ~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      +|++++||+|++||++|..++.|+.||++|+++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            456666777777777777777777777777654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=1.7e-11  Score=71.76  Aligned_cols=35  Identities=17%  Similarity=0.181  Sum_probs=27.3

Q ss_pred             hhhhhccCCcccccccccccCChHHHHHHHHhhcC
Q psy16834        408 HLIQVHPAQKHQCHICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       408 H~~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      |.++|++++||+|++|+++|+++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56677778888888888888888888888888764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.09  E-value=6e-12  Score=77.78  Aligned_cols=42  Identities=19%  Similarity=0.495  Sum_probs=36.8

Q ss_pred             chHHHhhhhhhccCCcccccc--cccccCChHHHHHHHHhhcCCC
Q psy16834        402 RGRLNEHLIQVHPAQKHQCHI--CNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       402 ~~~L~~H~~~~h~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      ++.|..|++ +.+++||+|++  |+++|+.+++|+.|+++|||||
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456777775 88999999988  9999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=2e-11  Score=70.40  Aligned_cols=34  Identities=41%  Similarity=1.070  Sum_probs=31.5

Q ss_pred             CcCCcc--hhhccCChhhHhccccccccCcCcccccc
Q psy16834        445 PFHCPE--CGKAFKFKRYVTLHMRTHTGNWPTFVCKI  479 (488)
Q Consensus       445 ~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~C~~  479 (488)
                      .|.|++  ||++|.+++.|++||++|+|++| |+|+.
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C~f   36 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEF   36 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCS
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCC-EeCCC
Confidence            378987  99999999999999999999999 99974

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=3.7e-11  Score=65.79  Aligned_cols=27  Identities=37%  Similarity=0.630  Sum_probs=15.7

Q ss_pred             cccccc--cccccCChHHHHHHHHhhcCC
Q psy16834        417 KHQCHI--CNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       417 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ||+|++  |+|+|+.++.|++|+++||||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            555555  555555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=8.5e-11  Score=67.98  Aligned_cols=26  Identities=27%  Similarity=0.660  Sum_probs=10.7

Q ss_pred             cCCCCCccCCccCCcCCCchHHHhhh
Q psy16834        384 HDKSDNTECPLCGKSFPSRGRLNEHL  409 (488)
Q Consensus       384 H~~~~~~~C~~C~k~F~~~~~L~~H~  409 (488)
                      |+|++||+|++||++|..+++|..|+
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~   28 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHI   28 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHc
Confidence            34444444444444444444444443

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.4e-10  Score=63.41  Aligned_cols=28  Identities=32%  Similarity=0.742  Sum_probs=25.7

Q ss_pred             CCcCCcc--hhhccCChhhHhccccccccC
Q psy16834        444 EPFHCPE--CGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       444 ~~~~C~~--C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |||.|++  ||++|.++++|+.|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899988  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.2e-10  Score=63.93  Aligned_cols=28  Identities=29%  Similarity=0.594  Sum_probs=17.7

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcCC
Q psy16834        416 QKHQCHI--CNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       416 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      +||+|++  |+|+|+.++.|++|+++||||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3566655  666666666666666666664

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=3.5e-11  Score=66.05  Aligned_cols=28  Identities=43%  Similarity=0.948  Sum_probs=26.9

Q ss_pred             CCcCCcc--hhhccCChhhHhccccccccC
Q psy16834        444 EPFHCPE--CGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       444 ~~~~C~~--C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |||.|++  ||++|+++++|+.|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999996

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.3e-11  Score=62.94  Aligned_cols=26  Identities=27%  Similarity=0.473  Sum_probs=15.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      +||+|+.|||+|..++.|..|+++||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            35555666666655555555555553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.3e-10  Score=63.34  Aligned_cols=28  Identities=25%  Similarity=0.488  Sum_probs=14.3

Q ss_pred             ccccc--ccccccCChHHHHHHHHhhcCCC
Q psy16834        417 KHQCH--ICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       417 ~~~C~--~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      ||.|+  .|+|+|+..+.|++|+++|||||
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            45553  25555555555555555555543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.1e-10  Score=64.64  Aligned_cols=29  Identities=45%  Similarity=0.784  Sum_probs=27.0

Q ss_pred             CCcCCc--chhhccCChhhHhccccccccCc
Q psy16834        444 EPFHCP--ECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       444 ~~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      +||.|+  .||++|++.++|+.|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            699996  59999999999999999999984

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.8e-10  Score=60.09  Aligned_cols=26  Identities=46%  Similarity=0.870  Sum_probs=21.0

Q ss_pred             CCcCCcchhhccCChhhHhccccccc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHT  469 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~  469 (488)
                      |||+|+.||++|.++++|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.77  E-value=1e-09  Score=60.92  Aligned_cols=28  Identities=29%  Similarity=0.661  Sum_probs=17.8

Q ss_pred             CCCcCCcc--hhhccCChhhHhcccccccc
Q psy16834        443 SEPFHCPE--CGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       443 ~~~~~C~~--C~~~F~~~~~L~~H~~~H~~  470 (488)
                      |+||.|++  ||++|++.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45666665  66666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=5.7e-10  Score=60.37  Aligned_cols=26  Identities=23%  Similarity=0.620  Sum_probs=14.1

Q ss_pred             cccccc--cccccCChHHHHHHHHhhcC
Q psy16834        417 KHQCHI--CNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       417 ~~~C~~--C~k~f~~~~~L~~H~~~H~~  442 (488)
                      ||+|++  |+|+|++.+.|++|+++|||
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            455554  55555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=2.3e-09  Score=57.95  Aligned_cols=27  Identities=41%  Similarity=0.908  Sum_probs=24.1

Q ss_pred             CCcCCcc--hhhccCChhhHhcccccccc
Q psy16834        444 EPFHCPE--CGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       444 ~~~~C~~--C~~~F~~~~~L~~H~~~H~~  470 (488)
                      |||+|++  ||++|.+.++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899987  99999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.3e-09  Score=52.52  Aligned_cols=25  Identities=36%  Similarity=0.780  Sum_probs=12.2

Q ss_pred             ccccccccccCChHHHHHHHHhhcC
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      ++|++|+|.|+.+..|+.|||.|||
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4445555555555555555544443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=8.2e-09  Score=50.56  Aligned_cols=26  Identities=50%  Similarity=0.947  Sum_probs=23.5

Q ss_pred             CcCCcchhhccCChhhHhcccccccc
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      |.+|++|++.|+++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=2.1e-09  Score=57.35  Aligned_cols=26  Identities=35%  Similarity=0.752  Sum_probs=14.1

Q ss_pred             CCcCCcc--hhhccCChhhHhccccccc
Q psy16834        444 EPFHCPE--CGKAFKFKRYVTLHMRTHT  469 (488)
Q Consensus       444 ~~~~C~~--C~~~F~~~~~L~~H~~~H~  469 (488)
                      |||.|++  ||++|++.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3555554  5555555555555555553

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.62  E-value=1e-08  Score=56.85  Aligned_cols=29  Identities=24%  Similarity=0.466  Sum_probs=23.2

Q ss_pred             CCcccccc--cccccCChHHHHHHHHhhcCC
Q psy16834        415 AQKHQCHI--CNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       415 ~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ++||.|++  |+|+|+....|++|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            46888887  888888888888888888753

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.9e-09  Score=54.68  Aligned_cols=26  Identities=35%  Similarity=0.662  Sum_probs=19.9

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhc
Q psy16834        416 QKHQCHI--CNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       416 ~~~~C~~--C~k~f~~~~~L~~H~~~H~  441 (488)
                      +||.|++  |||+|++..+|++|+++||
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4777777  7778878888888887775

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=1.3e-08  Score=51.69  Aligned_cols=27  Identities=30%  Similarity=0.646  Sum_probs=18.8

Q ss_pred             CCCcCCcchhhccCChhhHhccccccc
Q psy16834        443 SEPFHCPECGKAFKFKRYVTLHMRTHT  469 (488)
Q Consensus       443 ~~~~~C~~C~~~F~~~~~L~~H~~~H~  469 (488)
                      |+||.|++||+.|.++...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467777777777777777777777663

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=6.3e-08  Score=51.11  Aligned_cols=31  Identities=32%  Similarity=0.685  Sum_probs=25.5

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCCcC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTNSEPFH  447 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~  447 (488)
                      ...|++|||.|.....|.+|...|+||+||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4578888888888888888888888888874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=3.2e-08  Score=49.77  Aligned_cols=29  Identities=38%  Similarity=0.781  Sum_probs=19.9

Q ss_pred             CCCcCCcchhhccCChhhHhccccccccC
Q psy16834        443 SEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       443 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |+||+|.+|..+-..++.|..|+|+|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46677777777777777777777777664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=1.1e-07  Score=48.33  Aligned_cols=27  Identities=22%  Similarity=0.536  Sum_probs=23.8

Q ss_pred             CCcccccccccccCChHHHHHHHHhhc
Q psy16834        415 AQKHQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       415 ~~~~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      ++||.|++||+.|+.....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999999999999885

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=5e-08  Score=50.24  Aligned_cols=29  Identities=41%  Similarity=0.976  Sum_probs=20.7

Q ss_pred             CCCcCCcchhhccCChhhHhccccccccC
Q psy16834        443 SEPFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       443 ~~~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      |+||.|++|+.+|+++.-+.-|.|+|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46777777777777777777777777654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=2.7e-07  Score=45.39  Aligned_cols=26  Identities=35%  Similarity=0.528  Sum_probs=23.7

Q ss_pred             cccccccccCChHHHHHHHHhhcCCC
Q psy16834        419 QCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       419 ~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +|+.|.|+|.++..|+.|-|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999985

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5.1e-07  Score=45.12  Aligned_cols=26  Identities=42%  Similarity=0.770  Sum_probs=18.9

Q ss_pred             ccccccccccCChHHHHHHHHhhcCC
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      +.|..|||+|...+.|++|..+||||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46777777777777777777777765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=7.9e-07  Score=44.64  Aligned_cols=29  Identities=28%  Similarity=0.488  Sum_probs=25.3

Q ss_pred             CCcccccccccccCChHHHHHHHHhhcCC
Q psy16834        415 AQKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       415 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ++||+|.+|+..-.+.+.|..|++.|||+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46899999999989999999999999885

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=6.3e-07  Score=46.09  Aligned_cols=29  Identities=38%  Similarity=0.856  Sum_probs=22.8

Q ss_pred             CCceeCccccccccchhhHHhHhhhccCC
Q psy16834        149 DKPFECQFCRKAFKLKYYLTLHLRTHTGV  177 (488)
Q Consensus       149 ~~~~~C~~C~~~F~~~~~L~~H~~~h~~~  177 (488)
                      ++||.|++|+..|+.+..+..|++.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47888888888888888888888887663

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1.5e-06  Score=43.92  Aligned_cols=27  Identities=30%  Similarity=0.443  Sum_probs=22.1

Q ss_pred             ccccccccccCChHHHHHHHHhhcCCC
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      |.|++||..-..++.|+.|++.|||++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            778888888888888888888888774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.2e-06  Score=46.18  Aligned_cols=31  Identities=32%  Similarity=0.690  Sum_probs=26.3

Q ss_pred             ceeecccccccccCHHHHHhHHhhhccCCce
Q psy16834        275 VNYKCEICGEEFLSKTRYNRHVVTHEEKQKF  305 (488)
Q Consensus       275 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~  305 (488)
                      +...|++||+.|.....|.+|...|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3467889999999999999998888888887

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=1.6e-06  Score=43.25  Aligned_cols=27  Identities=41%  Similarity=0.653  Sum_probs=24.9

Q ss_pred             CcCCcchhhccCChhhHhccccccccC
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      ...|..||++|...+.|++|..+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357999999999999999999999986

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=2.8e-06  Score=42.93  Aligned_cols=28  Identities=36%  Similarity=0.586  Sum_probs=26.2

Q ss_pred             CcCCcchhhccCChhhHhccccccccCc
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMRTHTGNW  472 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~  472 (488)
                      .|.|+.||..-...+.|..|+|+|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3899999999999999999999999974

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.9e-06  Score=44.41  Aligned_cols=24  Identities=25%  Similarity=0.503  Sum_probs=13.6

Q ss_pred             cccccc--cccccCChHHHHHHHHhh
Q psy16834        417 KHQCHI--CNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       417 ~~~C~~--C~k~f~~~~~L~~H~~~H  440 (488)
                      ||.|.+  |+|+++..++|+.|++.+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhh
Confidence            555555  555555555555555543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1e-05  Score=41.67  Aligned_cols=27  Identities=26%  Similarity=0.588  Sum_probs=17.4

Q ss_pred             CCcCCcc--hhhccCChhhHhcccccccc
Q psy16834        444 EPFHCPE--CGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       444 ~~~~C~~--C~~~F~~~~~L~~H~~~H~~  470 (488)
                      +||.|.+  |++++...++|+.||++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4666665  66666666666666666544

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=1.3e-05  Score=40.30  Aligned_cols=29  Identities=24%  Similarity=0.542  Sum_probs=20.9

Q ss_pred             CCcccccccccccCChHHHHHHHHhhcCC
Q psy16834        415 AQKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       415 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ++.|.|.+|...|..+..|+.||-.|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34577777777777777777777777765

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.69  E-value=1.4e-05  Score=38.48  Aligned_cols=24  Identities=25%  Similarity=0.667  Sum_probs=15.3

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy16834        418 HQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       418 ~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      |+|..|.++|..+++|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            456666666666666666666653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=1.1e-05  Score=39.52  Aligned_cols=25  Identities=56%  Similarity=1.014  Sum_probs=15.5

Q ss_pred             eCccccccccchhhHHhHhhhccCC
Q psy16834        153 ECQFCRKAFKLKYYLTLHLRTHTGV  177 (488)
Q Consensus       153 ~C~~C~~~F~~~~~L~~H~~~h~~~  177 (488)
                      +|+.|.++|.++..|+.|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4666666666666666666666654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=4.6e-06  Score=41.48  Aligned_cols=26  Identities=27%  Similarity=0.623  Sum_probs=13.6

Q ss_pred             CCcCCcchhhccCChhhHhccccccc
Q psy16834        444 EPFHCPECGKAFKFKRYVTLHMRTHT  469 (488)
Q Consensus       444 ~~~~C~~C~~~F~~~~~L~~H~~~H~  469 (488)
                      +||+|..|+.+-...++|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            45555555555555555555555543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=2.5e-05  Score=39.60  Aligned_cols=29  Identities=38%  Similarity=0.734  Sum_probs=19.1

Q ss_pred             CccccccccccccChhHHHHHHhhhcCCC
Q psy16834        359 DRFKCVFCEKSFARNCNLKLHIRRYHDKS  387 (488)
Q Consensus       359 ~~~~C~~C~k~F~~~~~l~~H~~~~H~~~  387 (488)
                      +||.|.+|...-...++|+.|++..|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            36667777766667777777766666544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.59  E-value=2.3e-05  Score=43.79  Aligned_cols=29  Identities=21%  Similarity=0.493  Sum_probs=19.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNSE  444 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  444 (488)
                      +.|+|.+|++.|.+..+|=-||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45667777777777777777776665543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=4.1e-05  Score=37.99  Aligned_cols=26  Identities=27%  Similarity=0.655  Sum_probs=21.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      +||+|..|+..-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57888888888888888888888875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=6e-05  Score=37.87  Aligned_cols=29  Identities=24%  Similarity=0.655  Sum_probs=25.1

Q ss_pred             CceeecccccccccCHHHHHhHHhhhccC
Q psy16834        274 DVNYKCEICGEEFLSKTRYNRHVVTHEEK  302 (488)
Q Consensus       274 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~  302 (488)
                      +..|.|.+|.+.|...-.|+.||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688999999999999999999999874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=1.1e-05  Score=40.76  Aligned_cols=23  Identities=43%  Similarity=0.909  Sum_probs=19.3

Q ss_pred             CcCCcchhhccCChhhHhccccc
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMRT  467 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~~  467 (488)
                      ||.|..|+.+|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68888888888888888888875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=5.9e-05  Score=38.19  Aligned_cols=29  Identities=34%  Similarity=0.730  Sum_probs=21.6

Q ss_pred             CcccCCcccccccchhhHHHHHHhhcCCC
Q psy16834          9 EKFSCSLCSYSVTIKRNLIMHIKRKHTDE   37 (488)
Q Consensus         9 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~   37 (488)
                      +||+|..|.+...+.++|..|++..|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            47777778777777777877777777654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.40  E-value=3.1e-05  Score=37.29  Aligned_cols=24  Identities=29%  Similarity=0.645  Sum_probs=22.7

Q ss_pred             cCCcchhhccCChhhHhccccccc
Q psy16834        446 FHCPECGKAFKFKRYVTLHMRTHT  469 (488)
Q Consensus       446 ~~C~~C~~~F~~~~~L~~H~~~H~  469 (488)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.37  E-value=5.2e-05  Score=39.33  Aligned_cols=28  Identities=25%  Similarity=0.609  Sum_probs=21.8

Q ss_pred             ccccccccccccChhHHHHHHhhhcCCC
Q psy16834        360 RFKCVFCEKSFARNCNLKLHIRRYHDKS  387 (488)
Q Consensus       360 ~~~C~~C~k~F~~~~~l~~H~~~~H~~~  387 (488)
                      ||.|.+|++.|.++..|.+|....|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6778888888888888888887777653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=1.4e-05  Score=41.54  Aligned_cols=25  Identities=40%  Similarity=0.761  Sum_probs=12.7

Q ss_pred             CcCCcc--hhhccCChhhHhccc-cccc
Q psy16834        445 PFHCPE--CGKAFKFKRYVTLHM-RTHT  469 (488)
Q Consensus       445 ~~~C~~--C~~~F~~~~~L~~H~-~~H~  469 (488)
                      ||.|++  |.|+|+..++-..|+ |+|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            455544  555555555555554 4444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=8.4e-05  Score=37.32  Aligned_cols=25  Identities=28%  Similarity=0.470  Sum_probs=16.6

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhh
Q psy16834        416 QKHQCHI--CNKIVVSEKTLKKHLLLH  440 (488)
Q Consensus       416 ~~~~C~~--C~k~f~~~~~L~~H~~~H  440 (488)
                      .||.|+.  |++.|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566654  777777777777776665

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=3.8e-05  Score=42.89  Aligned_cols=26  Identities=27%  Similarity=0.674  Sum_probs=20.3

Q ss_pred             cCCCCcCCcchhhccCChhhHhcccc
Q psy16834        441 TNSEPFHCPECGKAFKFKRYVTLHMR  466 (488)
Q Consensus       441 ~~~~~~~C~~C~~~F~~~~~L~~H~~  466 (488)
                      ||-+||.|.+|++.|-+..++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            56788888888888888888887753

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00011  Score=41.05  Aligned_cols=26  Identities=31%  Similarity=0.692  Sum_probs=23.1

Q ss_pred             cCCCceeCccccccccchhhHHhHhh
Q psy16834        147 SDDKPFECQFCRKAFKLKYYLTLHLR  172 (488)
Q Consensus       147 ~~~~~~~C~~C~~~F~~~~~L~~H~~  172 (488)
                      +|-+||.|.+|++.|.++.++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46789999999999999999999974

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=4.9e-05  Score=39.42  Aligned_cols=28  Identities=25%  Similarity=0.421  Sum_probs=19.0

Q ss_pred             Ccccccc--cccccCChHHHHHHH-HhhcCC
Q psy16834        416 QKHQCHI--CNKIVVSEKTLKKHL-LLHTNS  443 (488)
Q Consensus       416 ~~~~C~~--C~k~f~~~~~L~~H~-~~H~~~  443 (488)
                      +||.|++  |.|.|++.+....|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            4677766  777777777777775 667643

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.16  E-value=9.7e-05  Score=38.30  Aligned_cols=27  Identities=30%  Similarity=0.658  Sum_probs=19.3

Q ss_pred             cccCCcccccccchhhHHHHHHhhcCC
Q psy16834         10 KFSCSLCSYSVTIKRNLIMHIKRKHTD   36 (488)
Q Consensus        10 ~~~C~~C~~~f~~~~~L~~H~~~~h~~   36 (488)
                      ||.|.+|++.|..+.-|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            577777777777777777777666654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.07  E-value=0.00022  Score=39.78  Aligned_cols=25  Identities=20%  Similarity=0.607  Sum_probs=12.6

Q ss_pred             ceecCccCccccChhhHHHHHHhcc
Q psy16834        123 LFDCHICGKTVVTEKNYKKHMQLHS  147 (488)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~H~  147 (488)
                      .|.|.+|++.|.+..+|--||+.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            3455555555555555555555443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00016  Score=36.49  Aligned_cols=27  Identities=33%  Similarity=0.699  Sum_probs=20.6

Q ss_pred             CcccCCcccccccchhhHHHHHHhhcC
Q psy16834          9 EKFSCSLCSYSVTIKRNLIMHIKRKHT   35 (488)
Q Consensus         9 ~~~~C~~C~~~f~~~~~L~~H~~~~h~   35 (488)
                      +||+|+.|+......++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            478888888877888888888876664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00017  Score=36.42  Aligned_cols=27  Identities=30%  Similarity=0.757  Sum_probs=19.3

Q ss_pred             CccccccccccccChhHHHHHHhhhcC
Q psy16834        359 DRFKCVFCEKSFARNCNLKLHIRRYHD  385 (488)
Q Consensus       359 ~~~~C~~C~k~F~~~~~l~~H~~~~H~  385 (488)
                      +||+|++|+..-.+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            467777777777777777777776654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.99  E-value=0.00016  Score=36.45  Aligned_cols=27  Identities=33%  Similarity=0.518  Sum_probs=13.7

Q ss_pred             cccccc--cccccCChHHHHHHHHhhcCC
Q psy16834        417 KHQCHI--CNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       417 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ||.|.+  |.|.|.+--.|.+|..+|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            444433  555555555555555555543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.97  E-value=0.00022  Score=35.79  Aligned_cols=25  Identities=40%  Similarity=0.797  Sum_probs=17.8

Q ss_pred             CceeCcc--ccccccchhhHHhHhhhc
Q psy16834        150 KPFECQF--CRKAFKLKYYLTLHLRTH  174 (488)
Q Consensus       150 ~~~~C~~--C~~~F~~~~~L~~H~~~h  174 (488)
                      .||.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677754  777777777777777665

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.95  E-value=6.2e-05  Score=37.98  Aligned_cols=28  Identities=46%  Similarity=0.800  Sum_probs=25.6

Q ss_pred             CCcCCcc--hhhccCChhhHhccccccccC
Q psy16834        444 EPFHCPE--CGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       444 ~~~~C~~--C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +||.|..  |.+.|.+-..|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5899964  999999999999999999986

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.93  E-value=0.00025  Score=34.04  Aligned_cols=22  Identities=32%  Similarity=0.788  Sum_probs=12.8

Q ss_pred             cccCccccCcCCChHHHHHHHH
Q psy16834         39 SILCPECGRGFFNEKELAAHKI   60 (488)
Q Consensus        39 ~~~C~~C~~~f~~~~~l~~H~~   60 (488)
                      ||+|..|...|..+.+|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4555556666665555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00034  Score=35.19  Aligned_cols=23  Identities=26%  Similarity=0.457  Sum_probs=16.5

Q ss_pred             cccccccccccCChHHHHHHHHh
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLL  439 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~  439 (488)
                      ||.|..|+.+|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56777777777777777777754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.55  E-value=0.0007  Score=32.47  Aligned_cols=24  Identities=29%  Similarity=0.581  Sum_probs=21.8

Q ss_pred             cccCCcccccccchhhHHHHHHhh
Q psy16834         10 KFSCSLCSYSVTIKRNLIMHIKRK   33 (488)
Q Consensus        10 ~~~C~~C~~~f~~~~~L~~H~~~~   33 (488)
                      ||+|+-|+..|..+.+|+.||-..
T Consensus         2 pykcsscsqqfmqkkdlqshmikl   25 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKL   25 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhc
Confidence            799999999999999999998543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.0012  Score=32.75  Aligned_cols=25  Identities=24%  Similarity=0.466  Sum_probs=19.4

Q ss_pred             cccccccccccCChHHHHHHHHhhc
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      |-+|+.|+.+.+++.+|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4568888888888888888888874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.00089  Score=36.09  Aligned_cols=24  Identities=21%  Similarity=0.218  Sum_probs=18.9

Q ss_pred             ccccccccCChHHHHHHHHhhcCC
Q psy16834        420 CHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       420 C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      |+-=++.|..+..|..|||+||||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333456789999999999999986

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.30  E-value=0.0011  Score=31.97  Aligned_cols=24  Identities=38%  Similarity=0.865  Sum_probs=18.8

Q ss_pred             cccccccccccChhHHHHHHhhhc
Q psy16834        361 FKCVFCEKSFARNCNLKLHIRRYH  384 (488)
Q Consensus       361 ~~C~~C~k~F~~~~~l~~H~~~~H  384 (488)
                      |.|++|-|.|+++.++..|++.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888877655

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0019  Score=35.50  Aligned_cols=27  Identities=41%  Similarity=0.731  Sum_probs=16.3

Q ss_pred             CCCceeC--ccccccccchhhHHhHhhhc
Q psy16834        148 DDKPFEC--QFCRKAFKLKYYLTLHLRTH  174 (488)
Q Consensus       148 ~~~~~~C--~~C~~~F~~~~~L~~H~~~h  174 (488)
                      +++||.|  +-|+.+|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            3566666  34666666666666666555

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.00071  Score=37.25  Aligned_cols=26  Identities=35%  Similarity=0.896  Sum_probs=13.9

Q ss_pred             CCCcCC--cchhhccCChhhHhcccccc
Q psy16834        443 SEPFHC--PECGKAFKFKRYVTLHMRTH  468 (488)
Q Consensus       443 ~~~~~C--~~C~~~F~~~~~L~~H~~~H  468 (488)
                      +|||.|  +-|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            455555  33555555555555555544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.01  E-value=0.0012  Score=32.52  Aligned_cols=22  Identities=41%  Similarity=0.893  Sum_probs=17.6

Q ss_pred             CcCCcchhhccCChhhHhcccc
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMR  466 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~  466 (488)
                      ||+|..||+.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6888888888888888887754

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0026  Score=31.43  Aligned_cols=26  Identities=31%  Similarity=0.768  Sum_probs=21.3

Q ss_pred             cccCCcccccccchhhHHHHHHhhcC
Q psy16834         10 KFSCSLCSYSVTIKRNLIMHIKRKHT   35 (488)
Q Consensus        10 ~~~C~~C~~~f~~~~~L~~H~~~~h~   35 (488)
                      +|+|+.|+.....+++|..|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            57888998888888889888876663

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0028  Score=31.31  Aligned_cols=24  Identities=38%  Similarity=0.928  Sum_probs=16.9

Q ss_pred             cccccccccccChhHHHHHHhhhc
Q psy16834        361 FKCVFCEKSFARNCNLKLHIRRYH  384 (488)
Q Consensus       361 ~~C~~C~k~F~~~~~l~~H~~~~H  384 (488)
                      |.|+.|+-...++++|..|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            667777777777777777776655

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.71  E-value=0.0034  Score=30.86  Aligned_cols=21  Identities=33%  Similarity=0.574  Sum_probs=12.9

Q ss_pred             cccCCcccccccchhhHHHHH
Q psy16834         10 KFSCSLCSYSVTIKRNLIMHI   30 (488)
Q Consensus        10 ~~~C~~C~~~f~~~~~L~~H~   30 (488)
                      ||+|..||+.+..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            456666666666666666664

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0042  Score=35.86  Aligned_cols=25  Identities=24%  Similarity=0.555  Sum_probs=19.5

Q ss_pred             cccccccccccCChHHHHHHHHhhc
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~  441 (488)
                      .|.|.+|+|.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4778888888888888888877764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0043  Score=35.82  Aligned_cols=25  Identities=40%  Similarity=0.679  Sum_probs=20.6

Q ss_pred             CCccCCccCCcCCCchHHHhhhhhh
Q psy16834        388 DNTECPLCGKSFPSRGRLNEHLIQV  412 (488)
Q Consensus       388 ~~~~C~~C~k~F~~~~~L~~H~~~~  412 (488)
                      ..|.|.+|||.|.....|+.|...|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            4578889999999999999888764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0025  Score=31.57  Aligned_cols=26  Identities=31%  Similarity=0.571  Sum_probs=23.8

Q ss_pred             CcCCcchhhccCChhhHhcccccccc
Q psy16834        445 PFHCPECGKAFKFKRYVTLHMRTHTG  470 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~~H~~~H~~  470 (488)
                      |-+|+.|+.+-+.+..|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            66899999999999999999999854

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.20  E-value=0.0056  Score=29.39  Aligned_cols=24  Identities=33%  Similarity=0.672  Sum_probs=17.5

Q ss_pred             ccCCcccccccchhhHHHHHHhhc
Q psy16834         11 FSCSLCSYSVTIKRNLIMHIKRKH   34 (488)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~~h   34 (488)
                      |.|+.|-+.|+.+.++..|++..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            677777777777777777776554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.31  E-value=0.014  Score=30.70  Aligned_cols=26  Identities=19%  Similarity=0.359  Sum_probs=19.4

Q ss_pred             cccccccccccCChHHHHHHHHhhcC
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLLLHTN  442 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~~H~~  442 (488)
                      .|.|..|||+|..++.+.+|...-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888765554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.07  E-value=0.0065  Score=32.63  Aligned_cols=20  Identities=40%  Similarity=0.673  Sum_probs=18.1

Q ss_pred             hhccCChhhHhccccccccC
Q psy16834        452 GKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       452 ~~~F~~~~~L~~H~~~H~~~  471 (488)
                      ++.|..+..|..|||+||||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            46699999999999999996

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.16  E-value=0.0095  Score=30.44  Aligned_cols=21  Identities=29%  Similarity=0.398  Sum_probs=11.1

Q ss_pred             cccccCChHHHHHHHHhhcCC
Q psy16834        423 CNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       423 C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      |+..|.....|+.|+-.||||
T Consensus        11 C~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHCC
T ss_pred             cchhhccchhhhHHhhhhcCC
Confidence            555555555555555555543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.93  E-value=0.03  Score=27.30  Aligned_cols=19  Identities=37%  Similarity=0.567  Sum_probs=13.3

Q ss_pred             cccccCChHHHHHHHHhhc
Q psy16834        423 CNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       423 C~k~f~~~~~L~~H~~~H~  441 (488)
                      |+|.|..-+.|+.|+-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            7777777777777766665

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.77  E-value=0.038  Score=28.16  Aligned_cols=28  Identities=29%  Similarity=0.749  Sum_probs=21.6

Q ss_pred             CCcCCc--chhhccCChhhHhccccccccC
Q psy16834        444 EPFHCP--ECGKAFKFKRYVTLHMRTHTGN  471 (488)
Q Consensus       444 ~~~~C~--~C~~~F~~~~~L~~H~~~H~~~  471 (488)
                      +.|.|.  -|+.+|+....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            456674  5888888888888888888875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.72  E-value=0.039  Score=29.01  Aligned_cols=20  Identities=30%  Similarity=0.866  Sum_probs=9.8

Q ss_pred             ccCccccCcCCChHHHHHHH
Q psy16834         40 ILCPECGRGFFNEKELAAHK   59 (488)
Q Consensus        40 ~~C~~C~~~f~~~~~l~~H~   59 (488)
                      |.|..||+.|..+..+.+|.
T Consensus         5 fvcskcgktftrrntm~rha   24 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHA   24 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHh
Confidence            44445555555544444444

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.30  E-value=0.038  Score=27.36  Aligned_cols=19  Identities=32%  Similarity=0.672  Sum_probs=14.5

Q ss_pred             cccccCChHHHHHHHHhhc
Q psy16834        423 CNKIVVSEKTLKKHLLLHT  441 (488)
Q Consensus       423 C~k~f~~~~~L~~H~~~H~  441 (488)
                      |+|.|...++++.|+.+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            7778888888888877763

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.80  E-value=0.063  Score=27.90  Aligned_cols=22  Identities=36%  Similarity=0.842  Sum_probs=14.1

Q ss_pred             CccCCCCCCccCChhhHHHHHh
Q psy16834         67 PFLCIPCNKPFSKIENYRLHQR   88 (488)
Q Consensus        67 ~~~C~~C~~~f~~~~~l~~H~~   88 (488)
                      .|.|.-||..|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4666666666666666666653

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.21  E-value=0.024  Score=35.87  Aligned_cols=18  Identities=28%  Similarity=0.635  Sum_probs=9.4

Q ss_pred             CcCCcchhhccCChhhHh
Q psy16834        445 PFHCPECGKAFKFKRYVT  462 (488)
Q Consensus       445 ~~~C~~C~~~F~~~~~L~  462 (488)
                      .|.||.|+++|+.-..+.
T Consensus        14 ~y~Cp~C~~~ys~Lda~~   31 (62)
T d1vd4a_          14 SFKCPVCSSTFTDLEANQ   31 (62)
T ss_dssp             EEECSSSCCEEEHHHHHH
T ss_pred             ceECCCCCCCcchhhHHH
Confidence            455555555555444444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.20  E-value=0.058  Score=28.02  Aligned_cols=22  Identities=32%  Similarity=0.677  Sum_probs=19.6

Q ss_pred             ccccCccccCcCCChHHHHHHH
Q psy16834         38 FSILCPECGRGFFNEKELAAHK   59 (488)
Q Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~   59 (488)
                      ..|.|.-||.+|.+.+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            3588999999999999999996

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.17  Score=25.21  Aligned_cols=24  Identities=25%  Similarity=0.451  Sum_probs=11.5

Q ss_pred             ccCCCCCCccCChHHHHHHHHhhc
Q psy16834        333 VLCPICGYGCFRNAELEEHFISAH  356 (488)
Q Consensus       333 ~~C~~C~~~f~~~~~l~~H~~~~~  356 (488)
                      |.|..||+...+...++.|+..-|
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            345555555555555555544333

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.63  E-value=0.11  Score=25.89  Aligned_cols=17  Identities=29%  Similarity=0.678  Sum_probs=6.3

Q ss_pred             cccccccccChhHHHHH
Q psy16834        363 CVFCEKSFARNCNLKLH  379 (488)
Q Consensus       363 C~~C~k~F~~~~~l~~H  379 (488)
                      |..|||...+...++.|
T Consensus         5 c~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           5 CHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CSSSCCCCSSHHHHHHH
T ss_pred             chhHHHHHhhccCceEE
Confidence            33333333333333333

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.53  E-value=0.1  Score=29.86  Aligned_cols=22  Identities=32%  Similarity=0.797  Sum_probs=10.4

Q ss_pred             CcccccccccccCChHHHHHHH
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHL  437 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~  437 (488)
                      +|-.|++|+....+..+|++|+
T Consensus        23 qpatcpic~avirqsrnlrrhl   44 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHL   44 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHH
Confidence            3444444444444444444444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.07  E-value=0.18  Score=28.74  Aligned_cols=28  Identities=25%  Similarity=0.462  Sum_probs=16.3

Q ss_pred             CCCccCCccCCcCCCchHHHhhhhhhcc
Q psy16834        387 SDNTECPLCGKSFPSRGRLNEHLIQVHP  414 (488)
Q Consensus       387 ~~~~~C~~C~k~F~~~~~L~~H~~~~h~  414 (488)
                      +.|-.|++|+....++.+|++|+..-|-
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            4455566666666666666666554443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.085  Score=33.87  Aligned_cols=22  Identities=27%  Similarity=0.682  Sum_probs=13.4

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy16834        417 KHQCHICNKIVVSEKTLKKHLL  438 (488)
Q Consensus       417 ~~~C~~C~k~f~~~~~L~~H~~  438 (488)
                      .|-|..|+|.|.+..+|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3566666666666666666653

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.65  E-value=0.12  Score=32.51  Aligned_cols=37  Identities=24%  Similarity=0.605  Sum_probs=17.2

Q ss_pred             CceeCccccccccchhhHHhHhhhccCCCCceecccchhhh
Q psy16834        150 KPFECQFCRKAFKLKYYLTLHLRTHTGVRPMFECDICHKVL  190 (488)
Q Consensus       150 ~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~~C~~C~~~f  190 (488)
                      ..|.|+.|+++|.....+.. +-.   ....|.|..|+...
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~L-~d~---~~~~F~C~~C~~el   49 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQL-FDP---MTGTFRCTFCHTEV   49 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHHH-EET---TTTEEBCSSSCCBC
T ss_pred             CceECCCCCCCcchhhHHHh-cCc---CCCeEEecCCCCEE
Confidence            34556666665555444433 111   11226666665544

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.58  E-value=0.15  Score=26.87  Aligned_cols=30  Identities=27%  Similarity=0.476  Sum_probs=21.1

Q ss_pred             CCCCcccCCcccccccchhhHHHHHHhhcC
Q psy16834          6 EDTEKFSCSLCSYSVTIKRNLIMHIKRKHT   35 (488)
Q Consensus         6 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~   35 (488)
                      +++..|.|.+|.+.++..+++-+|.-..|.
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            445567788888888888887777655553

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.54  E-value=0.15  Score=25.14  Aligned_cols=19  Identities=26%  Similarity=0.487  Sum_probs=15.8

Q ss_pred             ccCccccChhhHHHHHHhc
Q psy16834        128 ICGKTVVTEKNYKKHMQLH  146 (488)
Q Consensus       128 ~C~~~f~~~~~l~~H~~~H  146 (488)
                      -|++.|.+.+++.+|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3888888888888888776

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.33  E-value=0.12  Score=28.65  Aligned_cols=10  Identities=60%  Similarity=1.594  Sum_probs=5.7

Q ss_pred             cccCCCCCCc
Q psy16834        332 KVLCPICGYG  341 (488)
Q Consensus       332 ~~~C~~C~~~  341 (488)
                      .+.|++||..
T Consensus         5 ~~~C~vCG~i   14 (37)
T d1nnqa2           5 VYICPICGYT   14 (37)
T ss_dssp             EEECTTTCCE
T ss_pred             EEECCCCCCE
Confidence            3556666654

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=86.69  E-value=0.15  Score=28.00  Aligned_cols=10  Identities=70%  Similarity=1.437  Sum_probs=5.6

Q ss_pred             cccCCCCCCc
Q psy16834        332 KVLCPICGYG  341 (488)
Q Consensus       332 ~~~C~~C~~~  341 (488)
                      .+.|++||..
T Consensus         5 ~~vC~vCGyi   14 (36)
T d1yuza2           5 FHLCPICGYI   14 (36)
T ss_dssp             EEECSSSCCE
T ss_pred             EEECCCCCCE
Confidence            3556666654

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.64  E-value=0.26  Score=24.48  Aligned_cols=25  Identities=36%  Similarity=0.854  Sum_probs=16.7

Q ss_pred             cccc--cccccccChhHHHHHHhhhcC
Q psy16834        361 FKCV--FCEKSFARNCNLKLHIRRYHD  385 (488)
Q Consensus       361 ~~C~--~C~k~F~~~~~l~~H~~~~H~  385 (488)
                      |.|+  .|+-+|..+++++.|..+.|.
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhcc
Confidence            5554  377777777777777766553

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.47  E-value=0.063  Score=34.50  Aligned_cols=26  Identities=19%  Similarity=0.427  Sum_probs=23.1

Q ss_pred             CCCCcCCcchhhccCChhhHhccccc
Q psy16834        442 NSEPFHCPECGKAFKFKRYVTLHMRT  467 (488)
Q Consensus       442 ~~~~~~C~~C~~~F~~~~~L~~H~~~  467 (488)
                      |...|-|.+|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            34568999999999999999999986

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.73  E-value=0.26  Score=25.93  Aligned_cols=28  Identities=18%  Similarity=0.517  Sum_probs=19.9

Q ss_pred             CCccccccccccccChhHHHHHHhhhcC
Q psy16834        358 ADRFKCVFCEKSFARNCNLKLHIRRYHD  385 (488)
Q Consensus       358 ~~~~~C~~C~k~F~~~~~l~~H~~~~H~  385 (488)
                      ...|.|.+|.++++.-+++-+|....|.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            4457788888888888888777655553

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.16  E-value=0.17  Score=31.31  Aligned_cols=28  Identities=29%  Similarity=0.547  Sum_probs=22.5

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy16834        416 QKHQCHICNKIVVSEKTLKKHLLLHTNS  443 (488)
Q Consensus       416 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~  443 (488)
                      ..|+|..|.-.|.+-..|..|+..|..|
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            3588888888888888888888888643

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.46  E-value=0.57  Score=23.15  Aligned_cols=18  Identities=22%  Similarity=0.466  Sum_probs=10.5

Q ss_pred             CCCCccCChhhHHHHHhh
Q psy16834         72 PCNKPFSKIENYRLHQRR   89 (488)
Q Consensus        72 ~C~~~f~~~~~l~~H~~~   89 (488)
                      .||+.|++...|.-|.+-
T Consensus         7 gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTCCEESSHHHHHHHHHH
T ss_pred             CchhhhccHHHHHhHHHH
Confidence            466666666666655543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.48  E-value=0.62  Score=28.68  Aligned_cols=33  Identities=27%  Similarity=0.510  Sum_probs=27.6

Q ss_pred             CCCCcCCCCccccccccccccChhHHHHHHhhc
Q psy16834        197 SSGISKNENLRPCTLCDKKLASERKLKEHIRKQ  229 (488)
Q Consensus       197 ~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~  229 (488)
                      .++.......|.|..|+..|.+..+|..|+..+
T Consensus         9 ~~~~~~~s~~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1           9 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCcccCCceeeechhHHHHhhHHHHHHHHHhc
Confidence            344555677899999999999999999998775