Psyllid ID: psy16882

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHDGGYEETLHIPSDHVNTVYLEETQVLDDHDNSKKYIQQKFIKKEEPECQITTHHNMVQIDKSSRKWEQKQVQIRTLEGEFSVTMWASGGTDDDECSNPEFEQEHEYEDCILTEQEIKHEPIPGIDLSDPKQLAEFASVNNYRPGNNKIKVKRQVGLSAANEVVPNVQNNGSSGANSGNNLDRTIACPHKGCSKMFRDN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
HHHHHHHHccccEEccccccEEccHHHHHHHHHHccccccEEccccccccEEccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccHccHHHHHHHHHHHHHcccccccccccccccccEEcccccccEEcccccccccccccccEccccHHHHHHHHccccccccccHccHHHHHccccccccEccccccccccccccccccccEccccccHEHEEEcccccccccccccccEccccHHHHHHHccccccccccccccccEccccccHHcEEEEccccccccccEEccccccccEEccH
Coil and Loop (DISEMBL)
mrkhlhthgprvHVCAECGKAFVESSKLKRhqlvhtgekpfqctfegcgkrfsldfnlrthvrihtgdrpyvcpfdgcnkkfaqstnlksHILTHAKAKLLKGLFSLKMCPHILDEmkrhdggyeetlhipsdhvntvYLEEtqvlddhdnsKKYIQQKFikkeepecqitthhnmvqidkssrKWEQKQVQIRTLEGEFSVtmwasggtdddecsnpefeqeheyedcilteqeikhepipgidlsdpkqlaefasvnnyrpgnnkikVKRQVGLsaanevvpnvqnngssgansgnnldrtiacphkgcskmfrdn
Flexible Loop (DISEMBL)
mrkhlhthgprvhvcaECGKAFVESSKLKRHQLVHTgekpfqctfegCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHDGGYEETLHIPSDHVNTVYLEEtqvlddhdnsKKYIQQKFIKkeepecqitthhnmvqidkssrkWEQKQVQIRTLEGEFSVTMWASGGTDDDECSNPEFEQEHEYEDCILTEQEIKHEPIPGIDLSDPKQLAEFAsvnnyrpgnnKIKVKRQVGLSAANevvpnvqnngssgansgnnldrtiacphkgcskmfrdn
Low Complexity Region (SEG)
MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHDGGYEETLHIPSDHVNTVYLEETQVLDDHDNSKKYIQQKFIKKEEPECQITTHHNMVQIDKSSRKWEQKQVQIRTLEGEFSVTMWASGGTDDDECSNPEFEQEHEYEDCILTEQEIKHEPIPGIDLSDPKQLAEFASVNNYRPGNNKIKVKRQVGLSAANEVVPNVQnngssgansgnnLDRTIACPHKGCSKMFRDN
Disordered region (IsUnstruct)
**********RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHDGGYEETLHIPSDHVNTVYLEETQVLDDHDNSKKYIQQKFIKK***ECQITTHHNMVQI*********KQVQIRTLEGEFSVTMWA********************EDCILTE*************************************************************************************
Disordered Region (DISOPRED)
MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHDGGYEETLHIPS**************DDHDNSKKYIQQKFIKKEEPECQITTHHNMVQIDKSSRKWEQKQVQIRTLEGEFSVTMWASGG***************EYEDCILTEQ*********************************************************************IACPHKGCSK*****
Disordered Region (DISEMBL)
***********VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHDGGYEETLHIPSDHVNTVYLEETQVLDDHDNSKKYIQQKFIKKEEPECQITTHHNMVQ************VQIRTLEGEFSVTMWASGGTDDDECSNPEFEQEHEYEDCILTEQEIKHEPIPGIDLSDPKQLAEFASVNNYRPGNNKIKVKRQVGLSAANEVVPNVQNNGSSGANSGNNLDRTIACPHKGCSKMFRDN
Disordered Region (DISPRO)
MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHDGGYEETLHIPSDHVNTVYLEETQVLDDHDNSKKYIQQKFIKKEEPECQITTHHNMVQIDKSSRKWEQKQVQIRTLEGEFSVTMWASGGTDDDECSNPEFEQEHEYEDCILTEQEIKHEPIPGIDLSDPKQLAEFASVNNYRPGNNKIKVKRQVGLSAANEVVPNVQNNGSSGANSGNNLDRTIACPHKGCSKMF***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHDGGYEETLHIPSDHVNTVYLEETQVLDDHDNSKKYIQQKFIKKEEPECQITTHHNMVQIDKSSRKWEQKQVQIRTLEGEFSVTMWASGGTDDDECSNPEFEQEHEYEDCILTEQEIKHEPIPGIDLSDPKQLAEFASVNNYRPGNNKIKVKRQVGLSAANEVVPNVQNNGSSGANSGNNLDRTIACPHKGCSKMFRDN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	318	2.2.26 [Sep-21-2011]
P25490	414	Transcriptional repressor	yes	N/A	0.150	0.115	1.0	6e-56
Q00899	414	Transcriptional repressor	yes	N/A	0.150	0.115	1.0	8e-56
Q8ST83	520	Polycomb protein PHO OS=D	yes	N/A	0.226	0.138	0.979	9e-56
Q2FAY8	376	Transcription factor YY2	N/A	N/A	0.207	0.175	0.919	7e-52
P0C6P6	376	Transcription factor YY2	no	N/A	0.207	0.175	0.919	8e-52
Q3TTC2	378	Transcription factor YY2	no	N/A	0.194	0.164	0.919	9e-52
O15391	372	Transcription factor YY2	no	N/A	0.169	0.145	0.888	1e-50
Q96MM3	310	Zinc finger protein 42 ho	no	N/A	0.198	0.203	0.833	3e-44
P22227	288	Zinc finger protein 42 OS	no	N/A	0.298	0.329	0.816	4e-44
Q2V3L3	387	Uncharacterized zinc fing	yes	N/A	0.298	0.245	0.525	3e-26

>sp|P25490|TYY1_HUMAN Transcriptional repressor protein YY1 OS=Homo sapiens GN=YY1 PE=1 SV=2

 Score =  218 bits (554), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 313 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 372

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 373 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 411

Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair; proposed to target the INO80 complex to YY1-responsive elements.
Homo sapiens (taxid: 9606)

>sp|Q00899|TYY1_MOUSE Transcriptional repressor protein YY1 OS=Mus musculus GN=Yy1 PE=1 SV=1

 Score =  217 bits (553), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 313 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 372

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 373 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 411

Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair; proposed to target the INO80 complex to YY1-responsive elements.

Mus musculus (taxid: 10090)

>sp|Q8ST83|PHO_DROME Polycomb protein PHO OS=Drosophila melanogaster GN=pho PE=1 SV=2

 Score =  217 bits (552), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 97/99 (97%), Positives = 98/99 (98%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 374 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 433

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRP+VCPFD CNKKFAQSTNLKSHILTHAKAK
Sbjct: 434 HVRIHTGDRPFVCPFDACNKKFAQSTNLKSHILTHAKAK 472

Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.

Drosophila melanogaster (taxid: 7227)

>sp|Q2FAY8|TYY2_RATRT Transcription factor YY2 OS=Rattus rattus GN=Yy2 PE=3 SV=1

 Score =  204 bits (519), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 91/99 (91%), Positives = 95/99 (95%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLH HGPRVHVCAECGKAFVESSKLKRHQLVHTGEKP+QCTFEGCG+RFSLDFNLRT
Sbjct: 275 MRKHLHIHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPYQCTFEGCGRRFSLDFNLRT 334

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGD+P+VCPFD CNKKFAQSTNLKSHILTH K K
Sbjct: 335 HVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTHVKNK 373

Functions as a multifunctional transcription factor that may exhibit positive and negative control on a large number of genes. May antagonize YY1 and function in development and differentiation.

Rattus rattus (taxid: 10117)

>sp|P0C6P6|TYY2_RAT Transcription factor YY2 OS=Rattus norvegicus GN=Yy2 PE=3 SV=1

 Score =  204 bits (519), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 91/99 (91%), Positives = 95/99 (95%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLH HGPRVHVCAECGKAFVESSKLKRHQLVHTGEKP+QCTFEGCG+RFSLDFNLRT
Sbjct: 275 MRKHLHIHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPYQCTFEGCGRRFSLDFNLRT 334

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGD+P+VCPFD CNKKFAQSTNLKSHILTH K K
Sbjct: 335 HVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTHVKNK 373

Functions as a multifunctional transcription factor that may exhibit positive and negative control on a large number of genes. May antagonize YY1 and function in development and differentiation.

Rattus norvegicus (taxid: 10116)

>sp|Q3TTC2|TYY2_MOUSE Transcription factor YY2 OS=Mus musculus GN=Yy2 PE=2 SV=1

 Score =  204 bits (518), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 91/99 (91%), Positives = 95/99 (95%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLH HGPRVHVCAECGKAFVESSKLKRHQLVHTGEKP+QCTFEGCG+RFSLDFNLRT
Sbjct: 277 MRKHLHIHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPYQCTFEGCGRRFSLDFNLRT 336

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGD+P+VCPFD CNKKFAQSTNLKSHILTH K K
Sbjct: 337 HVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTHVKNK 375

Functions as a multifunctional transcription factor that may exhibit positive and negative control on a large number of genes. May antagonize YY1 and function in development and differentiation.

Mus musculus (taxid: 10090)

>sp|O15391|TYY2_HUMAN Transcription factor YY2 OS=Homo sapiens GN=YY2 PE=2 SV=1

 Score =  200 bits (508), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 88/99 (88%), Positives = 95/99 (95%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLH HGPRVHVCAECGKAF+ESSKL+RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 271 MRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 330

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           H+RIHTGD+P+VCPFD CN+KFAQSTNLK+HILTH K K
Sbjct: 331 HLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTK 369

Functions as a multifunctional transcription factor that may exhibit positive and negative control on a large number of genes. May antagonize YY1 and function in development and differentiation.

Homo sapiens (taxid: 9606)

>sp|Q96MM3|ZFP42_HUMAN Zinc finger protein 42 homolog OS=Homo sapiens GN=ZFP42 PE=1 SV=2

 Score =  179 bits (453), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/96 (83%), Positives = 88/96 (91%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           +RKHL  HGPR HVCAECGKAFVESSKLKRH LVHTGEKPF+CTFEGCGKRFSLDFNLRT
Sbjct: 205 LRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCGKRFSLDFNLRT 264

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 96
           HVRIHTG++ +VCPF GCN++F QS NLK+HILTHA
Sbjct: 265 HVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA 300

Involved in self-renewal property of ES cells (By similarity). May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P22227|ZFP42_MOUSE Zinc finger protein 42 OS=Mus musculus GN=Zfp42 PE=1 SV=1

 Score =  178 bits (452), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/98 (81%), Positives = 86/98 (87%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           +RKH+  HGPR HVCAECGKAF ESSKLKRH LVHTGEKP+QCTFEGCGKRFSLDFNLRT
Sbjct: 187 LRKHMLVHGPRRHVCAECGKAFTESSKLKRHFLVHTGEKPYQCTFEGCGKRFSLDFNLRT 246

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 98
           H+RIHTG+R +VCPFDGC K F QS N K HILTHAKA
Sbjct: 247 HIRIHTGERRFVCPFDGCEKSFIQSNNQKIHILTHAKA 284

Involved in self-renewal property of ES cells. May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q2V3L3|Y4634_ARATH Uncharacterized zinc finger protein At4g06634 OS=Arabidopsis thaliana GN=At4g06634 PE=1 SV=1

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 51/97 (52%), Positives = 73/97 (75%), Gaps = 2/97 (2%)

Query: 1   MRKHLHTHGPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 58
           +RKH H HG R +VC +  CGK F++SSKLKRH L+HTGE+ + CT+EGCGK FSLDFNL
Sbjct: 96  LRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNL 155

Query: 59  RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           R+H++ H+ +  ++CP+ GC K++A    LK+H+  +
Sbjct: 156 RSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAY 192

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
263359629	518	hypothetical protein DVIR88_6g0002 [Dros	0.333	0.204	0.900	1e-54
442759803	383	Putative transcriptional repressor prote	0.254	0.211	1.0	1e-54
344254678	371	Ena/VASP-like protein [Cricetulus griseu	0.311	0.266	1.0	1e-54
345478936	402	PREDICTED: transcriptional repressor pro	0.185	0.146	0.934	1e-54
291225268	378	PREDICTED: YY1 transcription factor-like	0.141	0.119	1.0	2e-54
395484813	354	transcriptional repressor [Fenneropenaeu	0.191	0.172	1.0	2e-54
319803027	388	pleiohomeotic [Bombyx mori] gi|317175911	0.226	0.185	0.961	2e-54
405975659	353	Transcriptional repressor protein YY1 [C	0.220	0.198	1.0	2e-54
332843092	640	PREDICTED: transcriptional repressor pro	0.150	0.075	1.0	2e-54
195469439	516	GE14485 [Drosophila yakuba] gi|194185746	0.311	0.191	0.979	2e-54

>gi|263359629|gb|ACY70465.1| hypothetical protein DVIR88_6g0002 [Drosophila virilis]

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/111 (90%), Positives = 101/111 (90%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 371 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 430

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCP 111
           HVRIHTGDRP+VCPFD CNKKFAQSTNLKSHILTHAKAK   G      CP
Sbjct: 431 HVRIHTGDRPFVCPFDACNKKFAQSTNLKSHILTHAKAKRNTGNPRHTTCP 481

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442759803|gb|JAA72060.1| Putative transcriptional repressor protein yy1-like isoform 1 [Ixodes ricinus]

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 263 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 322

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 323 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 361

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|344254678|gb|EGW10782.1| Ena/VASP-like protein [Cricetulus griseus]

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 270 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 329

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 330 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 368

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345478936|ref|XP_001603501.2| PREDICTED: transcriptional repressor protein YY1 [Nasonia vitripennis]

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/107 (93%), Positives = 103/107 (96%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 291 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 350

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSL 107
           HVRIHTGDRPYVCPFDGC+KKFAQSTNLKSHILTHAKAK +   F+L
Sbjct: 351 HVRIHTGDRPYVCPFDGCSKKFAQSTNLKSHILTHAKAKYVLISFNL 397

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291225268|ref|XP_002732622.1| PREDICTED: YY1 transcription factor-like [Saccoglossus kowalevskii]

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 280 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 339

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 340 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 378

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|395484813|gb|AFN66651.1| transcriptional repressor [Fenneropenaeus chinensis] gi|395484815|gb|AFN66652.1| transcriptional repressor [Fenneropenaeus chinensis]

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 215 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 274

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 275 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 313

Source: Fenneropenaeus chinensis

Species: Fenneropenaeus chinensis

Genus: Fenneropenaeus

Family: Penaeidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|319803027|ref|NP_001188362.1| pleiohomeotic [Bombyx mori] gi|317175911|dbj|BAJ54071.1| pleiohomeotic [Bombyx mori]

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 100/104 (96%), Positives = 100/104 (96%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 248 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 307

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGL 104
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK    L
Sbjct: 308 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKSRNSL 351

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405975659|gb|EKC40213.1| Transcriptional repressor protein YY1 [Crassostrea gigas]

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 243 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 302

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 303 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 341

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|332843092|ref|XP_510162.3| PREDICTED: transcriptional repressor protein YY1 [Pan troglodytes]

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 539 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 598

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 599 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 637

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195469439|ref|XP_002099645.1| GE14485 [Drosophila yakuba] gi|194185746|gb|EDW99357.1| GE14485 [Drosophila yakuba]

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 97/99 (97%), Positives = 98/99 (98%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 370 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 429

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRP+VCPFD CNKKFAQSTNLKSHILTHAKAK
Sbjct: 430 HVRIHTGDRPFVCPFDACNKKFAQSTNLKSHILTHAKAK 468

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
ZFIN|ZDB-GENE-030131-1117	357	yy1a "YY1 transcription factor	0.311	0.277	1.0	1.5e-53
UNIPROTKB|F1MFX0	344	YY1 "Uncharacterized protein"	0.311	0.287	1.0	1.5e-53
ZFIN|ZDB-GENE-040426-2127	365	yy1b "YY1 transcription factor	0.311	0.271	1.0	1.5e-53
UNIPROTKB|E2RHE9	410	YY1 "Uncharacterized protein"	0.311	0.241	1.0	1.5e-53
UNIPROTKB|P25490	414	YY1 "Transcriptional repressor	0.311	0.239	1.0	1.5e-53
MGI|MGI:99150	414	Yy1 "YY1 transcription factor"	0.311	0.239	1.0	1.5e-53
RGD|3982	411	Yy1 "YY1 transcription factor"	0.311	0.240	1.0	1.5e-53
UNIPROTKB|F1NHV6	189	YY1 "Uncharacterized protein"	0.311	0.523	1.0	1.5e-53
UNIPROTKB|F1NKJ0	196	YY1 "Uncharacterized protein"	0.311	0.505	1.0	1.5e-53
UNIPROTKB|F1NKJ1	173	YY1 "Uncharacterized protein"	0.311	0.572	1.0	1.5e-53

ZFIN|ZDB-GENE-030131-1117 yy1a "YY1 transcription factor a" [Danio rerio (taxid:7955)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:   256 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 315

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   316 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 354

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1MFX0 YY1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:   243 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 302

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   303 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 341

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-040426-2127 yy1b "YY1 transcription factor b" [Danio rerio (taxid:7955)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:   264 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 323

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   324 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 362

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E2RHE9 YY1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:   309 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 368

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   369 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 407

GO:0051276 "chromosome organization" evidence=IEA

GO:0048593 "camera-type eye morphogenesis" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0034644 "cellular response to UV" evidence=IEA

GO:0031519 "PcG protein complex" evidence=IEA

GO:0031011 "Ino80 complex" evidence=IEA

GO:0010225 "response to UV-C" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0006403 "RNA localization" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0000724 "double-strand break repair via homologous recombination" evidence=IEA

GO:0000400 "four-way junction DNA binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P25490 YY1 "Transcriptional repressor protein YY1" [Homo sapiens (taxid:9606)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:   313 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 372

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   373 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 411

GO:0008270 "zinc ion binding" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0006403 "RNA localization" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0031519 "PcG protein complex" evidence=IEA

GO:0034696 "response to prostaglandin F stimulus" evidence=IEA

GO:0048593 "camera-type eye morphogenesis" evidence=IEA

GO:0051276 "chromosome organization" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0031011 "Ino80 complex" evidence=IDA

GO:0034644 "cellular response to UV" evidence=IMP

GO:0000724 "double-strand break repair via homologous recombination" evidence=IMP

GO:0000400 "four-way junction DNA binding" evidence=IDA

GO:0010225 "response to UV-C" evidence=IMP

GO:0006974 "response to DNA damage stimulus" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0003713 "transcription coactivator activity" evidence=TAS

GO:0003714 "transcription corepressor activity" evidence=TAS

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0003677 "DNA binding" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

MGI|MGI:99150 Yy1 "YY1 transcription factor" [Mus musculus (taxid:10090)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:   313 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 372

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   373 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 411

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO;IDA

GO:0000400 "four-way junction DNA binding" evidence=ISO

GO:0000724 "double-strand break repair via homologous recombination" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISO;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0003723 "RNA binding" evidence=ISO

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005667 "transcription factor complex" evidence=ISO;IDA

GO:0006281 "DNA repair" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISO;IDA

GO:0006403 "RNA localization" evidence=IMP

GO:0006974 "response to DNA damage stimulus" evidence=ISO;IMP

GO:0007283 "spermatogenesis" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IGI;IMP

GO:0010225 "response to UV-C" evidence=ISO;IMP

GO:0030154 "cell differentiation" evidence=IEA

GO:0031011 "Ino80 complex" evidence=ISO

GO:0031519 "PcG protein complex" evidence=IDA

GO:0034644 "cellular response to UV" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048593 "camera-type eye morphogenesis" evidence=IGI

GO:0051276 "chromosome organization" evidence=IMP

RGD|3982 Yy1 "YY1 transcription factor" [Rattus norvegicus (taxid:10116)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:   310 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 369

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   370 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 408

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0000400 "four-way junction DNA binding" evidence=IEA;ISO

GO:0000724 "double-strand break repair via homologous recombination" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO

GO:0003723 "RNA binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005667 "transcription factor complex" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISO;IDA

GO:0006403 "RNA localization" evidence=IEA;ISO

GO:0006974 "response to DNA damage stimulus" evidence=ISO

GO:0007283 "spermatogenesis" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA;ISO

GO:0010225 "response to UV-C" evidence=IEA;ISO

GO:0031011 "Ino80 complex" evidence=IEA;ISO

GO:0031519 "PcG protein complex" evidence=IEA;ISO

GO:0034644 "cellular response to UV" evidence=IEA;ISO

GO:0034696 "response to prostaglandin F stimulus" evidence=IEP

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA;ISO

GO:0045939 "negative regulation of steroid metabolic process" evidence=NAS

GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO

GO:0051276 "chromosome organization" evidence=IEA;ISO

UNIPROTKB|F1NHV6 YY1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:    88 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 147

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   148 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 186

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NKJ0 YY1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:    95 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 154

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   155 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 193

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NKJ1 YY1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query:     1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
             MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct:    72 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 131

Query:    61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
             HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct:   132 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 170

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	318
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	8e-06
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	6e-05
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	5e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	6e-04
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	9e-04

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 46.6 bits (110), Expect = 8e-06
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 13  HVCAECGKAFVESSKLKRHQ--LVHTGE--KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
               +C  +F  SS L RH   + H+GE  KPF C +  CGK FS +  L+ H+ +HT  
Sbjct: 290 IKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI 349

Query: 69  RPYVCPFDGCNKKFAQSTNLKSH 91
            P        + KF+   N +  
Sbjct: 350 SPAKEKLLNSSSKFSPLLNNEPP 372

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 43.9 bits (103), Expect = 6e-05
 Identities = 27/82 (32%), Positives = 35/82 (42%)

Query: 10  PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
           PR   C  C  +F     L RH   HTGEKP QC++ GC K FS    L  H+R H  + 
Sbjct: 31  PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNP 90

Query: 70  PYVCPFDGCNKKFAQSTNLKSH 91
             +            S++  S 
Sbjct: 91  SDLNSKSLPLSNSKASSSSLSS 112

Length = 467

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 2/26 (7%)

Query: 28 LKRHQLVHTGEKPFQCTFEGCGKRFS 53
          L+RH   HTGEKP++C    CGK FS
Sbjct: 2  LRRHMRTHTGEKPYKCPV--CGKSFS 25

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 36.2 bits (84), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 57 NLRTHVRIHTGDRPYVCPFDGCNKKFAQ 84
          NLR H+R HTG++PY CP   C K F+ 
Sbjct: 1  NLRRHMRTHTGEKPYKCPV--CGKSFSS 26

Length = 26

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 40.5 bits (94), Expect = 9e-04
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 23/80 (28%)

Query: 33  LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH--------------------TGDRPYV 72
           L     KP++C  EGC K++     L+ H  +H                      D+PY 
Sbjct: 342 LKVKDGKPYKCPVEGCNKKYKNQNGLKYH-MLHGHQNQKLHENPSPEKMNIFSAKDKPYR 400

Query: 73  CPFDGCNKKFAQSTNLKSHI 92
           C    C+K++     LK H 
Sbjct: 401 CEV--CDKRYKNLNGLKYHR 418

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	318
KOG2462|consensus	279		99.83
KOG2462|consensus	279		99.75
KOG1074|consensus	958		99.41
KOG3576|consensus	267		99.35
KOG3623|consensus	1007		99.33
KOG3576|consensus	267		99.23
KOG3623|consensus	1007		99.16
KOG3608|consensus	467		99.1
KOG3608|consensus	467		99.07
KOG1074|consensus	958		98.77
PHA00733	128	hypothetical protein	98.68
PLN03086	567	PRLI-interacting factor K; Provisional	98.48
PHA00733	128	hypothetical protein	98.44
PHA02768	55	hypothetical protein; Provisional	98.41
KOG3993|consensus	500		98.24
PHA02768	55	hypothetical protein; Provisional	98.18
PLN03086	567	PRLI-interacting factor K; Provisional	98.18
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.05
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.85
PHA00616	44	hypothetical protein	97.71
PHA00732	79	hypothetical protein	97.55
PHA00616	44	hypothetical protein	97.42
KOG3993|consensus	500		97.34
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.22
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.14
PHA00732	79	hypothetical protein	97.12
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.86
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.8
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.72
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.51
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.5
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.36
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.24
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.76
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.72
smart00355	26	ZnF_C2H2 zinc finger.	95.46
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.85
smart00355	26	ZnF_C2H2 zinc finger.	94.14
COG5048	467	FOG: Zn-finger [General function prediction only]	93.8
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.65
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.92
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.54
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	92.3
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	92.22
COG5048	467	FOG: Zn-finger [General function prediction only]	92.0
KOG4173|consensus	253		89.68
PRK04860	160	hypothetical protein; Provisional	89.29
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	86.43
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	85.34
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	82.72
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	82.27

>KOG2462|consensus

Probab=99.83  E-value=2.2e-21  Score=177.35  Aligned_cols=107  Identities=37%  Similarity=0.761  Sum_probs=97.9

Q ss_pred             Chhchhhh----CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCC
Q psy16882          1 MRKHLHTH----GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD   76 (318)
Q Consensus         1 Lr~HlrtH----g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~   76 (318)
                      |.+|..+|    ..+.+.|++|++.|.+...|+.|+++|+  .+++|.+  |||.|.+.+.|+.|+|+|+|||||.|++ 
T Consensus       146 LsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~h-  220 (279)
T KOG2462|consen  146 LSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCPH-  220 (279)
T ss_pred             cchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcccccccCCCCccCCc-
Confidence            67899999    5688999999999999999999999997  6789988  9999999999999999999999999987 


Q ss_pred             CCCcccCChhHHHHHHHHhcccccccccccCCCchhHHHhh
Q psy16882         77 GCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEM  117 (318)
Q Consensus        77 ~C~k~F~~~~~L~~H~r~H~~~k~~~c~~~C~~C~~~~~~~  117 (318)
                       |+|.|..+++|+.|++||.+.|.|    .|..|++.|.-|
T Consensus       221 -C~kAFADRSNLRAHmQTHS~~K~~----qC~~C~KsFsl~  256 (279)
T KOG2462|consen  221 -CGKAFADRSNLRAHMQTHSDVKKH----QCPRCGKSFALK  256 (279)
T ss_pred             -ccchhcchHHHHHHHHhhcCCccc----cCcchhhHHHHH
Confidence             999999999999999999999864    577888877643

>KOG2462|consensus

Probab=99.75  E-value=3.1e-19  Score=163.38  Aligned_cols=89  Identities=40%  Similarity=0.739  Sum_probs=84.4

Q ss_pred             ChhchhhhCCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCc
Q psy16882          1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK   80 (318)
Q Consensus         1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k   80 (318)
                      |++|+||| .-+++|.+|||.|.+..-|+-|+++|+||+||.|+.  |+++|.++++|+.||++|.+.|+|+|..  |+|
T Consensus       177 LkMHirTH-~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K~~qC~~--C~K  251 (279)
T KOG2462|consen  177 LKMHIRTH-TLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVKKHQCPR--CGK  251 (279)
T ss_pred             HhhHhhcc-CCCcccccccccccchHHhhcccccccCCCCccCCc--ccchhcchHHHHHHHHhhcCCccccCcc--hhh
Confidence            68999999 478999999999999999999999999999999998  9999999999999999999999999965  999


Q ss_pred             ccCChhHHHHHHHH
Q psy16882         81 KFAQSTNLKSHILT   94 (318)
Q Consensus        81 ~F~~~~~L~~H~r~   94 (318)
                      +|+..+.|.+|...
T Consensus       252 sFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  252 SFALKSYLNKHSES  265 (279)
T ss_pred             HHHHHHHHHHhhhh
Confidence            99999999999754

>KOG1074|consensus

Probab=99.41  E-value=5.5e-14  Score=144.04  Aligned_cols=69  Identities=32%  Similarity=0.662  Sum_probs=63.1

Q ss_pred             cccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccccccCC---CchhHHH
Q psy16882         43 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLK---MCPHILD  115 (318)
Q Consensus        43 C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~~C~---~C~~~~~  115 (318)
                      |.+  |.++....+.|+.|.|+|+||+||+|.|  |++.|.++.+|+.|+.+|...-+++-.+.|+   +|-+-|.
T Consensus       608 Cii--C~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  608 CII--CLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             eee--eeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhhhccccc
Confidence            777  9999999999999999999999999988  9999999999999999999888888888888   8876554

>KOG3576|consensus

Probab=99.35  E-value=1.2e-13  Score=121.69  Aligned_cols=100  Identities=38%  Similarity=0.720  Sum_probs=86.3

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL   88 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L   88 (318)
                      +...|.|.+|++.|.-..-|.+|++.|...+.|-|..  ||+.|...-.|++|+|+|+|-+||+|.+  |++.|..+-.|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsl  189 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSL  189 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccH
Confidence            3456999999999999999999999999999999998  9999999999999999999999999977  99999999999


Q ss_pred             HHHHH-Hhccccccc------ccccCCCchh
Q psy16882         89 KSHIL-THAKAKLLK------GLFSLKMCPH  112 (318)
Q Consensus        89 ~~H~r-~H~~~k~~~------c~~~C~~C~~  112 (318)
                      ..|++ +|.....|.      -.|.|+.|+.
T Consensus       190 eshl~kvhgv~~~yaykerr~kl~vcedcg~  220 (267)
T KOG3576|consen  190 ESHLKKVHGVQHQYAYKERRAKLYVCEDCGY  220 (267)
T ss_pred             HHHHHHHcCchHHHHHHHhhhheeeecccCC
Confidence            99985 454322221      2467777764

>KOG3623|consensus

Probab=99.33  E-value=2.1e-13  Score=137.92  Aligned_cols=81  Identities=37%  Similarity=0.858  Sum_probs=77.5

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL   88 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L   88 (318)
                      .+..|.|+.|.|.|...++|.+|.-.|+|.+||+|.+  |.|+|..+.+|..|+|.|.|+|||.|  ++|+|+|+....+
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQC--dKClKRFSHSGSY  966 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQC--DKCLKRFSHSGSY  966 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchh--hhhhhhcccccch
Confidence            4578999999999999999999999999999999999  99999999999999999999999999  7799999999999


Q ss_pred             HHHHH
Q psy16882         89 KSHIL   93 (318)
Q Consensus        89 ~~H~r   93 (318)
                      .+||-
T Consensus       967 SQHMN  971 (1007)
T KOG3623|consen  967 SQHMN  971 (1007)
T ss_pred             Hhhhc
Confidence            99973

>KOG3576|consensus

Probab=99.23  E-value=2.1e-12  Score=113.95  Aligned_cols=96  Identities=31%  Similarity=0.689  Sum_probs=86.1

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC-----------C
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG-----------D   68 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g-----------e   68 (318)
                      |++||+.| ..+.|-|..||+.|..-..|++|+++|+|.+||+|..  |+++|...-.|..|.+.-+|           +
T Consensus       133 lnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsleshl~kvhgv~~~yaykerr~  210 (267)
T KOG3576|consen  133 LNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSLESHLKKVHGVQHQYAYKERRA  210 (267)
T ss_pred             HHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccHHHHHHHHcCchHHHHHHHhhh
Confidence            67899999 8899999999999999999999999999999999998  99999999999999864333           4


Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      +.|.|  ++||.+-.+...+..|++.|+...+
T Consensus       211 kl~vc--edcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  211 KLYVC--EDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             heeee--cccCCCCCChhHHHHHHHhcCCCCH
Confidence            67999  5699999999999999999886544

>KOG3623|consensus

Probab=99.16  E-value=8e-12  Score=126.61  Aligned_cols=89  Identities=35%  Similarity=0.836  Sum_probs=72.0

Q ss_pred             Chhchh-hh--CCCcccCCccCcccccchhhhhhhhhhcC-------------CCceecccCCCCCcccchhhhhhhhhh
Q psy16882          1 MRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVHTG-------------EKPFQCTFEGCGKRFSLDFNLRTHVRI   64 (318)
Q Consensus         1 Lr~Hlr-tH--g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~-------------~kpy~C~~~~Cgk~F~~~~~L~~H~r~   64 (318)
                      |+.|++ .|  -+..|.|..|..+|..+..|.+||.+|..             .+.|+|..  |+|+|..+.+|+.|+|+
T Consensus       226 lkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtE--CgKAFKfKHHLKEHlRI  303 (1007)
T KOG3623|consen  226 LKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTE--CGKAFKFKHHLKEHLRI  303 (1007)
T ss_pred             HHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccc--cchhhhhHHHHHhhhee
Confidence            345654 34  45668899999999999999999988853             25588976  99999999999999999


Q ss_pred             cCCCCceeccCCCCCcccCChhHHHHHHH
Q psy16882         65 HTGDRPYVCPFDGCNKKFAQSTNLKSHIL   93 (318)
Q Consensus        65 H~gekpf~C~~~~C~k~F~~~~~L~~H~r   93 (318)
                      |.|+|||.|+  .|+|+|+....+..|+.
T Consensus       304 HSGEKPfeCp--nCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  304 HSGEKPFECP--NCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             ecCCCCcCCc--ccccccccCCccccccc
Confidence            9999999994  59999999888888874

>KOG3608|consensus

Probab=99.10  E-value=6.6e-11  Score=111.85  Aligned_cols=109  Identities=24%  Similarity=0.515  Sum_probs=75.7

Q ss_pred             ChhchhhhCCCcccCCccCcccccchhhhhhhh-hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCC
Q psy16882          1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN   79 (318)
Q Consensus         1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~-~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~   79 (318)
                      |+.|++.| ..-|+|+.|..+....++|.+||+ .|...+||+|..  |.+.|.+.+.|++|..+|. +..|.|.+++|.
T Consensus       253 L~~Hv~rH-vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~--Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~  328 (467)
T KOG3608|consen  253 LKSHVVRH-VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDE--CDTRCVRESDLAKHVQVHS-KTVYQCEHPDCH  328 (467)
T ss_pred             HHHHHHHh-hhcccccccccCCCChHHHHHHHHhhhccCCCccccc--hhhhhccHHHHHHHHHhcc-ccceecCCCCCc
Confidence            45566555 556777777777777777777776 577777788876  7788888888888877776 566777777777


Q ss_pred             cccCChhHHHHHHHHhc-ccccccccccCCCchhHHH
Q psy16882         80 KKFAQSTNLKSHILTHA-KAKLLKGLFSLKMCPHILD  115 (318)
Q Consensus        80 k~F~~~~~L~~H~r~H~-~~k~~~c~~~C~~C~~~~~  115 (318)
                      ..|.+..+|.+|++.++ +..+  ..|.|..|.+.|.
T Consensus       329 ~s~r~~~q~~~H~~evhEg~np--~~Y~CH~Cdr~ft  363 (467)
T KOG3608|consen  329 YSVRTYTQMRRHFLEVHEGNNP--ILYACHCCDRFFT  363 (467)
T ss_pred             HHHHHHHHHHHHHHHhccCCCC--Cceeeecchhhhc
Confidence            77777777878875433 4443  2455666665543

>KOG3608|consensus

Probab=99.07  E-value=3.9e-11  Score=113.36  Aligned_cols=97  Identities=36%  Similarity=0.683  Sum_probs=72.8

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhc--CCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT--GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG   77 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~--~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~   77 (318)
                      |+.|+++| +++...|+.||.-|+++..|-.|.+..+  ...+|.|..  |.|.|.+...|..|++.|..  -|+|++  
T Consensus       195 LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~--C~KrFaTeklL~~Hv~rHvn--~ykCpl--  268 (467)
T KOG3608|consen  195 LREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQ--CFKRFATEKLLKSHVVRHVN--CYKCPL--  268 (467)
T ss_pred             HHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHH--HHHHHhHHHHHHHHHHHhhh--cccccc--
Confidence            68899999 8998899999999999999988887543  445788876  88888888888888777743  467766  


Q ss_pred             CCcccCChhHHHHHHHH-hcccccccc
Q psy16882         78 CNKKFAQSTNLKSHILT-HAKAKLLKG  103 (318)
Q Consensus        78 C~k~F~~~~~L~~H~r~-H~~~k~~~c  103 (318)
                      |+.+...++.|..|++. |...++|+|
T Consensus       269 Cdmtc~~~ssL~~H~r~rHs~dkpfKC  295 (467)
T KOG3608|consen  269 CDMTCSSASSLTTHIRYRHSKDKPFKC  295 (467)
T ss_pred             cccCCCChHHHHHHHHhhhccCCCccc
Confidence            77777777777777654 555665554

>KOG1074|consensus

Probab=98.77  E-value=1.2e-09  Score=112.73  Aligned_cols=84  Identities=35%  Similarity=0.748  Sum_probs=77.4

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCC----Cceecc---CCCCCcccC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD----RPYVCP---FDGCNKKFA   83 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge----kpf~C~---~~~C~k~F~   83 (318)
                      -+..|-+|-+...-++.|+.|.++|+|++||+|.+  ||+.|.++.+|+.||-+|...    -+|.|+   +  |-+.|.
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~i--c~~kft  679 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFI--CQKKFT  679 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhh--hccccc
Confidence            36789999999999999999999999999999999  999999999999999999654    458998   8  999999


Q ss_pred             ChhHHHHHHHHhccc
Q psy16882         84 QSTNLKSHILTHAKA   98 (318)
Q Consensus        84 ~~~~L~~H~r~H~~~   98 (318)
                      ..-.|..|+++|.+.
T Consensus       680 n~V~lpQhIriH~~~  694 (958)
T KOG1074|consen  680 NAVTLPQHIRIHLGG  694 (958)
T ss_pred             ccccccceEEeecCC
Confidence            999999999999843

>PHA00733 hypothetical protein

Probab=98.68  E-value=1.5e-08  Score=84.87  Aligned_cols=83  Identities=20%  Similarity=0.447  Sum_probs=69.6

Q ss_pred             CCCcccCCccCcccccchhhhhh--hh---hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRH--QL---VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA   83 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H--~~---~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~   83 (318)
                      ..+++.|.+|.+.|.....|..|  +.   .+.+.+||.|..  |++.|.+...|..|++.|  +.+|.|.+  |++.|.
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~~--CgK~F~  110 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCPV--CGKEFR  110 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCCC--CCCccC
Confidence            35789999999999888777776  22   234578999987  999999999999999987  45799976  999999


Q ss_pred             ChhHHHHHHHHhcc
Q psy16882         84 QSTNLKSHILTHAK   97 (318)
Q Consensus        84 ~~~~L~~H~r~H~~   97 (318)
                      ....|..|+...++
T Consensus       111 ~~~sL~~H~~~~h~  124 (128)
T PHA00733        111 NTDSTLDHVCKKHN  124 (128)
T ss_pred             CHHHHHHHHHHhcC
Confidence            99999999987664

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.48  E-value=1.4e-07  Score=96.05  Aligned_cols=97  Identities=23%  Similarity=0.441  Sum_probs=74.5

Q ss_pred             CCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCC-----
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ-----   84 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~-----   84 (318)
                      ++.+.|+.|++.|. ...|..|+.+|+  .++.|+   |++.+ .+..|..|+++|.+.+++.|++  |++.|..     
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~  521 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAM  521 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC---CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCcccc
Confidence            45678999999996 678999999875  789996   99755 6689999999999999999988  9999852     


Q ss_pred             -----hhHHHHHHHHhcccccccccccCCCchhHHH--hhhhc
Q psy16882         85 -----STNLKSHILTHAKAKLLKGLFSLKMCPHILD--EMKRH  120 (318)
Q Consensus        85 -----~~~L~~H~r~H~~~k~~~c~~~C~~C~~~~~--~~~~h  120 (318)
                           ...|..|..++ +.++    +.|..|++.+.  .|..|
T Consensus       522 d~~d~~s~Lt~HE~~C-G~rt----~~C~~Cgk~Vrlrdm~~H  559 (567)
T PLN03086        522 DVRDRLRGMSEHESIC-GSRT----APCDSCGRSVMLKEMDIH  559 (567)
T ss_pred             chhhhhhhHHHHHHhc-CCcc----eEccccCCeeeehhHHHH
Confidence                 35788998886 5554    45667765432  34444

>PHA00733 hypothetical protein

Probab=98.44  E-value=1.4e-07  Score=79.01  Aligned_cols=63  Identities=29%  Similarity=0.389  Sum_probs=54.3

Q ss_pred             ChhchhhhCCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882          1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus         1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      |++|+.+|+.++|.|+.|++.|.+...|..|++.|  ..+|.|..  |++.|.....|..|+...++
T Consensus        62 l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~--CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         62 LYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPV--CGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCC--CCCccCCHHHHHHHHHHhcC
Confidence            34566666889999999999999999999999987  35799987  99999999999999876543

>PHA02768 hypothetical protein; Provisional

Probab=98.41  E-value=1e-07  Score=67.82  Aligned_cols=42  Identities=14%  Similarity=0.313  Sum_probs=24.8

Q ss_pred             ccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   58 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L   58 (318)
                      |.|+.||+.|.+.++|..||++|+  ++|+|..  |++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~--C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSN--CKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCc--ccceeccccee
Confidence            556666666666666666666665  4556654  66666555544

>KOG3993|consensus

Probab=98.24  E-value=1.9e-07  Score=90.42  Aligned_cols=83  Identities=30%  Similarity=0.566  Sum_probs=70.5

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC------------------------
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG------------------------   67 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g------------------------   67 (318)
                      -|.|.+|...|.....|.+|...-.-..-|+|+.  |+|.|....+|..|.|||.-                        
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            4899999999999999999986443334699986  99999999999999999931                        


Q ss_pred             ---------CCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         68 ---------DRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        68 ---------ekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                               +..|.|.+  |++.|.+..+|+.|+.+|+..
T Consensus       345 a~rsg~dss~gi~~C~~--C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             ccccCCcccCceeecHH--hhhhhHHHHHHHHhHHhhhcc
Confidence                     12399977  999999999999999888753

>PHA02768 hypothetical protein; Provisional

Probab=98.18  E-value=6e-07  Score=63.86  Aligned_cols=43  Identities=19%  Similarity=0.475  Sum_probs=36.3

Q ss_pred             ceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882         40 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL   88 (318)
Q Consensus        40 py~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L   88 (318)
                      .|.|+.  ||+.|...++|..|+++|+  ++|+|.  +|++.|.+.+.|
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc~--~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHN--TNLKLS--NCKRISLRTGEY   47 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcC--CcccCC--cccceeccccee
Confidence            478987  9999999999999999997  688995  499999877665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.18  E-value=1.8e-06  Score=87.95  Aligned_cols=85  Identities=24%  Similarity=0.496  Sum_probs=70.4

Q ss_pred             ChhchhhhCCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCccc----------chhhhhhhhhhcCCCCc
Q psy16882          1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS----------LDFNLRTHVRIHTGDRP   70 (318)
Q Consensus         1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~----------~~~~L~~H~r~H~gekp   70 (318)
                      |..|+++| ..++.|+ |++.| .+..|..|+.+|.+.+++.|..  |++.|.          ....|..|+..+ |.++
T Consensus       468 LekH~~~~-Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt  541 (567)
T PLN03086        468 MEKHMKVF-HEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT  541 (567)
T ss_pred             HHHHHHhc-CCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCccccchhhhhhhHHHHHHhc-CCcc
Confidence            45677776 4889999 99765 6689999999999999999998  999984          245899999886 9999


Q ss_pred             eeccCCCCCcccCChhHHHHHHHH
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILT   94 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~   94 (318)
                      +.|..  |++.|..+ .|..|+..
T Consensus       542 ~~C~~--Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        542 APCDS--CGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             eEccc--cCCeeeeh-hHHHHHHH
Confidence            99955  99988765 67888754

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.05  E-value=2e-06  Score=52.02  Aligned_cols=24  Identities=58%  Similarity=1.413  Sum_probs=15.3

Q ss_pred             hhhhhhhcCCCCceeccCCCCCcccC
Q psy16882         58 LRTHVRIHTGDRPYVCPFDGCNKKFA   83 (318)
Q Consensus        58 L~~H~r~H~gekpf~C~~~~C~k~F~   83 (318)
                      |..|+++|++++||.|++  |++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~--C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPY--CGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESS--SSEEES
T ss_pred             HHHHhhhcCCCCCCCCCC--CcCeeC
Confidence            566666666666666654  666664

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.85  E-value=8.2e-06  Score=49.35  Aligned_cols=25  Identities=60%  Similarity=1.306  Sum_probs=17.1

Q ss_pred             hhhhhhhhhcCCCceecccCCCCCccc
Q psy16882         27 KLKRHQLVHTGEKPFQCTFEGCGKRFS   53 (318)
Q Consensus        27 ~L~~H~~~H~~~kpy~C~~~~Cgk~F~   53 (318)
                      +|.+||++|++++||.|+.  |++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeC
Confidence            3666777777777777766  777664

...

>PHA00616 hypothetical protein

Probab=97.71  E-value=1.1e-05  Score=54.80  Aligned_cols=33  Identities=18%  Similarity=0.393  Sum_probs=22.0

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      ||+|..||+.|...+.|.+|++.|++++++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            466666666666666666666666666666654

>PHA00732 hypothetical protein

Probab=97.55  E-value=5.1e-05  Score=58.30  Aligned_cols=47  Identities=30%  Similarity=0.524  Sum_probs=31.6

Q ss_pred             cccCCccCcccccchhhhhhhhh-hcCCCceecccCCCCCcccchhhhhhhhhhcC
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLV-HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~-H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      ||.|..|++.|.+...|..|++. |.   ++.|..  |++.|.   .|..|++++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~--CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPV--CNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCC--CCCEeC---ChhhhhcccC
Confidence            46777777777777777777763 54   246765  777776   4666765543

>PHA00616 hypothetical protein

Probab=97.42  E-value=6.3e-05  Score=51.15  Aligned_cols=32  Identities=25%  Similarity=0.422  Sum_probs=17.6

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      ||.|+.  ||+.|...+.|..|++.|++++++.+
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCCccce
Confidence            355543  55555555555555555555555443

>KOG3993|consensus

Probab=97.34  E-value=9.5e-05  Score=72.10  Aligned_cols=53  Identities=34%  Similarity=0.600  Sum_probs=46.4

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCC---------------------------------CceecccCCCCCcccchhhh
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGE---------------------------------KPFQCTFEGCGKRFSLDFNL   58 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~---------------------------------kpy~C~~~~Cgk~F~~~~~L   58 (318)
                      -|+|+.|+|.|.-..+|..|.++|...                                 -.|.|.+  |++.|.+...|
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~--C~KkFrRqAYL  372 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHT--CGKKFRRQAYL  372 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHH--hhhhhHHHHHH
Confidence            499999999999999999999999521                                 1388998  99999999999


Q ss_pred             hhhhhhcC
Q psy16882         59 RTHVRIHT   66 (318)
Q Consensus        59 ~~H~r~H~   66 (318)
                      +.|+.+|.
T Consensus       373 rKHqlthq  380 (500)
T KOG3993|consen  373 RKHQLTHQ  380 (500)
T ss_pred             HHhHHhhh
Confidence            99988774

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.22  E-value=0.00011  Score=69.28  Aligned_cols=54  Identities=35%  Similarity=0.819  Sum_probs=43.6

Q ss_pred             CCceecccCCCCCcccchhhhhhhhhh-c------------------CCCCceeccCCCCCcccCChhHHHHHHH
Q psy16882         38 EKPFQCTFEGCGKRFSLDFNLRTHVRI-H------------------TGDRPYVCPFDGCNKKFAQSTNLKSHIL   93 (318)
Q Consensus        38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~-H------------------~gekpf~C~~~~C~k~F~~~~~L~~H~r   93 (318)
                      ++||+|++++|.|.+.....|+.|+.. |                  ...|||.|++  |+|+|.+...|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence            589999999999999999999999753 2                  1247899987  9999988888888753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.14  E-value=0.00016  Score=41.96  Aligned_cols=23  Identities=48%  Similarity=0.806  Sum_probs=15.0

Q ss_pred             ccCCccCcccccchhhhhhhhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQLVH   35 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~H   35 (318)
                      |+|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.12  E-value=0.00031  Score=53.98  Aligned_cols=47  Identities=36%  Similarity=0.725  Sum_probs=37.9

Q ss_pred             ceecccCCCCCcccchhhhhhhhhh-cCCCCceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         40 PFQCTFEGCGKRFSLDFNLRTHVRI-HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        40 py~C~~~~Cgk~F~~~~~L~~H~r~-H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      ||.|..  |++.|.+...|..|++. |.+   +.|+.  |++.|.   .|..|.+++.
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~~---~~C~~--CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHTL---TKCPV--CNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccCC---CccCC--CCCEeC---ChhhhhcccC
Confidence            578987  99999999999999984 653   68966  999997   5788886554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.86  E-value=0.00076  Score=52.46  Aligned_cols=74  Identities=23%  Similarity=0.403  Sum_probs=21.9

Q ss_pred             cCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHH
Q psy16882         14 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL   93 (318)
Q Consensus        14 ~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r   93 (318)
                      .|..|+..|.....|..||...++... .     ....+.....+..+.+.- -...+.|.+  |++.|.+...|..|++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~-~-----~~~~l~~~~~~~~~~~~~-~~~~~~C~~--C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI-P-----DQKYLVDPNRLLNYLRKK-VKESFRCPY--CNKTFRSREALQEHMR   71 (100)
T ss_dssp             -------------------------------------------------------SSEEBSS--SS-EESSHHHHHHHHH
T ss_pred             Ccccccccccccccccccccccccccc-c-----cccccccccccccccccc-cCCCCCCCc--cCCCCcCHHHHHHHHc
Confidence            599999999999999999975443211 1     111222344444444332 123699988  9999999999999998


Q ss_pred             Hhc
Q psy16882         94 THA   96 (318)
Q Consensus        94 ~H~   96 (318)
                      .+.
T Consensus        72 ~~~   74 (100)
T PF12756_consen   72 SKH   74 (100)
T ss_dssp             HTT
T ss_pred             Ccc
Confidence            753

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.85  E-value=0.0013  Score=46.55  Aligned_cols=49  Identities=31%  Similarity=0.697  Sum_probs=24.2

Q ss_pred             eecccCCCCCcccchhhhhhhhhh-cCCC-CceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVRI-HTGD-RPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r~-H~ge-kpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |.|++  |++ ..+...|..|... |..+ +.+.||+  |...+.  .+|..|+..++
T Consensus         3 f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            45555  555 3334555555433 3332 3456655  655433  25666655443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.80  E-value=0.001  Score=38.48  Aligned_cols=23  Identities=48%  Similarity=1.074  Sum_probs=16.6

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHh
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      |.|+.  |++.|.+...|..|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            56755  777777777777777664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.72  E-value=0.0013  Score=46.61  Aligned_cols=50  Identities=32%  Similarity=0.559  Sum_probs=39.0

Q ss_pred             cccCCccCcccccchhhhhhhh-hhcCC-CceecccCCCCCcccchhhhhhhhhhcC
Q psy16882         12 VHVCAECGKAFVESSKLKRHQL-VHTGE-KPFQCTFEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~-~H~~~-kpy~C~~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      .|.|++|++. .+...|..|.. .|..+ +.+.|++  |...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            5899999995 55688999987 45543 4699998  998655  48999988754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.51  E-value=0.0012  Score=37.88  Aligned_cols=23  Identities=39%  Similarity=0.806  Sum_probs=13.6

Q ss_pred             ccCCccCcccccchhhhhhhhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQLVH   35 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~H   35 (318)
                      |.|++|++.|.+...|..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666654

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.50  E-value=0.0023  Score=36.66  Aligned_cols=24  Identities=38%  Similarity=0.956  Sum_probs=16.6

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |.|++  |++.|.+...|..|+++|+
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHHS
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhhC
Confidence            57766  8888888888888877664

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.36  E-value=0.0013  Score=39.49  Aligned_cols=25  Identities=40%  Similarity=0.743  Sum_probs=15.7

Q ss_pred             cccCCccCcccccchhhhhhhhhhc
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      +|.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666666553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.24  E-value=0.0021  Score=60.92  Aligned_cols=53  Identities=30%  Similarity=0.620  Sum_probs=45.7

Q ss_pred             CCCcccCCc--cCcccccchhhhhhhh-hhc------------------CCCceecccCCCCCcccchhhhhhhhh
Q psy16882          9 GPRVHVCAE--CGKAFVESSKLKRHQL-VHT------------------GEKPFQCTFEGCGKRFSLDFNLRTHVR   63 (318)
Q Consensus         9 g~k~f~C~~--Cgk~F~~~~~L~~H~~-~H~------------------~~kpy~C~~~~Cgk~F~~~~~L~~H~r   63 (318)
                      +++||+|++  |.|.|....-|+-|+. -|.                  ..+||+|.+  |+|++.....|+.|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence            569999987  9999999999999986 331                  238999998  9999999999999964

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.76  E-value=0.0053  Score=42.97  Aligned_cols=29  Identities=31%  Similarity=0.626  Sum_probs=11.9

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      .|..|++  |+..+....+|.+|+.++++.+
T Consensus        23 ~PatCP~--C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   23 QPATCPI--CGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             --EE-TT--T--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCc--chhhccchhhHHHHHHHHhccc
Confidence            3455544  5555555555555554444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.72  E-value=0.0057  Score=36.66  Aligned_cols=25  Identities=32%  Similarity=0.758  Sum_probs=16.9

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      +|.|..  |++.|.+...|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            466754  7777777777777776654

>smart00355 ZnF_C2H2 zinc finger

Probab=95.46  E-value=0.0091  Score=34.46  Aligned_cols=24  Identities=46%  Similarity=0.733  Sum_probs=16.1

Q ss_pred             ccCCccCcccccchhhhhhhhhhc
Q psy16882         13 HVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467777777777777777766553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.85  E-value=0.027  Score=39.47  Aligned_cols=33  Identities=30%  Similarity=0.583  Sum_probs=23.6

Q ss_pred             CCCCceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882         66 TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        66 ~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      ..+.|-.|++  |+..+++..+|++|+..+|+.++
T Consensus        20 ~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            3568999988  99999999999999988887664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=94.14  E-value=0.043  Score=31.50  Aligned_cols=24  Identities=46%  Similarity=0.890  Sum_probs=19.1

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |.|..  |++.|.....|..|++.|.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHhc
Confidence            56865  8888888888888888664

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.80  E-value=0.047  Score=52.23  Aligned_cols=70  Identities=36%  Similarity=0.578  Sum_probs=36.6

Q ss_pred             cccCCccCcccccchhhhhhhh--hhcCC--CceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcc
Q psy16882         12 VHVCAECGKAFVESSKLKRHQL--VHTGE--KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK   81 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~--~H~~~--kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~   81 (318)
                      ++.|..|...|.....|.+|.+  .|.++  +++.|++..|++.|.....+..|...|.+..++.|....|...
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSK  362 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccc
Confidence            4555555555555555555555  45555  5555552225555555555555555555555554444333333

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.65  E-value=0.027  Score=33.00  Aligned_cols=22  Identities=27%  Similarity=0.611  Sum_probs=13.7

Q ss_pred             ccCCccCcccccchhhhhhhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQLV   34 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~   34 (318)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.92  E-value=0.063  Score=31.37  Aligned_cols=23  Identities=30%  Similarity=0.868  Sum_probs=17.3

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHh
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      |.|.+  |++.|.+...|..|++.+
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTTH
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCcC
Confidence            56766  888888888888887643

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.54  E-value=0.057  Score=32.46  Aligned_cols=22  Identities=32%  Similarity=0.637  Sum_probs=14.2

Q ss_pred             ccCCccCcccccchhhhhhhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQLV   34 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~   34 (318)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566666666666666666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=92.30  E-value=0.13  Score=29.90  Aligned_cols=23  Identities=39%  Similarity=0.847  Sum_probs=15.0

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |+|++  |+.... ...|.+|++.|+
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence            56765  877776 777888877754

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=92.22  E-value=0.067  Score=31.09  Aligned_cols=22  Identities=36%  Similarity=0.566  Sum_probs=11.5

Q ss_pred             ccCCccCcccccchhhhhhhhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQLVH   35 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~H   35 (318)
                      |+|+.|..... ...|.+|++.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            45666665555 55666666554

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.00  E-value=0.082  Score=50.59  Aligned_cols=100  Identities=29%  Similarity=0.482  Sum_probs=66.9

Q ss_pred             Chhchh--hh-CC--CcccCC--ccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhh-----hcCCC
Q psy16882          1 MRKHLH--TH-GP--RVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-----IHTGD   68 (318)
Q Consensus         1 Lr~Hlr--tH-g~--k~f~C~--~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-----~H~ge   68 (318)
                      |..|.+  .| ++  +++.|+  .|++.|.+...+..|...|.+..++.|....|...+.....-..+..     .-...
T Consensus       305 l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (467)
T COG5048         305 LTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKND  384 (467)
T ss_pred             ccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCCccchhhccCccCC
Confidence            456777  68 77  999999  79999999999999999999988877776556655554433211111     11223


Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      ..+.|....|...+.+...+..|...|.....
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (467)
T COG5048         385 KKSETLSNSCIRNFKRDSNLSLHIITHLSFRP  416 (467)
T ss_pred             ccccccccchhhhhccccccccccccccccCC
Confidence            44555544566666666666666666655543

>KOG4173|consensus

Probab=89.68  E-value=0.085  Score=47.38  Aligned_cols=81  Identities=28%  Similarity=0.613  Sum_probs=63.6

Q ss_pred             CcccCCc--cCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhh-hc---------CCCCceeccCCCC
Q psy16882         11 RVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IH---------TGDRPYVCPFDGC   78 (318)
Q Consensus        11 k~f~C~~--Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H---------~gekpf~C~~~~C   78 (318)
                      +.|.|++  |...|.....+..|..+-++   -.|..  |.+.|.+...|..|+. +|         .|..-|.|-+++|
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            4578986  88888888877888753322   36887  9999999999999974 34         3455699999999


Q ss_pred             CcccCChhHHHHHH-HHhc
Q psy16882         79 NKKFAQSTNLKSHI-LTHA   96 (318)
Q Consensus        79 ~k~F~~~~~L~~H~-r~H~   96 (318)
                      +..|.+...-..|+ ++|.
T Consensus       153 t~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhhhHHHHhcc
Confidence            99999999999997 5564

>PRK04860 hypothetical protein; Provisional

Probab=89.29  E-value=0.27  Score=42.77  Aligned_cols=36  Identities=28%  Similarity=0.834  Sum_probs=20.7

Q ss_pred             ceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccC
Q psy16882         40 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA   83 (318)
Q Consensus        40 py~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~   83 (318)
                      +|.|.   |+.   ....+.+|.++|+++++|.|..  |+..|.
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~YrC~~--C~~~l~  154 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRGEAVYRCRR--CGETLV  154 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcCCccEECCC--CCceeE
Confidence            35663   554   4455566666666666666633  666554

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=86.43  E-value=0.36  Score=28.87  Aligned_cols=21  Identities=38%  Similarity=0.823  Sum_probs=12.0

Q ss_pred             eecccCCCCCcccchhhhhhhhh
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVR   63 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r   63 (318)
                      |.|..  |++.|.+...|..|++
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTT
T ss_pred             CCccc--CCCCcCCHHHHHHHHc
Confidence            44554  6666666666655554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=85.34  E-value=0.51  Score=28.07  Aligned_cols=20  Identities=30%  Similarity=0.845  Sum_probs=15.4

Q ss_pred             ccCCccCcccccchhhhhhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      ..|+.||+.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4688899888 5677888865

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=82.72  E-value=1.1  Score=26.60  Aligned_cols=21  Identities=33%  Similarity=0.782  Sum_probs=15.3

Q ss_pred             eeccCCCCCcccCChhHHHHHHHH
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILT   94 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~   94 (318)
                      ..|++  |++.| ..+.|..|+.+
T Consensus         3 ~~C~~--CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPI--CGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCC--CCCEE-CHHHHHHHHHh
Confidence            46766  88888 66778888654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=82.27  E-value=0.68  Score=29.01  Aligned_cols=22  Identities=18%  Similarity=0.418  Sum_probs=16.0

Q ss_pred             cccCCccCcccccchhhhhhhh
Q psy16882         12 VHVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      +|.|.+|++.|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	318
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-55
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-19
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-18
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-17
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-14
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		7e-14
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-13
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-13
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-13
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-13
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-13
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-13
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-13
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		6e-13
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-12
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		4e-12
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		5e-12
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-10
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-09
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		3e-09
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		5e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-08
1znm_A	28	A Zinc Finger With An Artificial Beta-Turn, Origina		2e-08
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		2e-08
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		3e-08
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		1e-05
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		3e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		3e-05
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-05
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		1e-04
2emm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2yth_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2eor_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2emj_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2eq0_A	46	Solution Structure Of The 8th C2h2 Type Zinc Finger		4e-04
2ep3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		6e-04
2emp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2en1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2emi_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score =  211 bits (536), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 23  MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 82
Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 83  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 1   MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 59
           + +H  TH G + + C ECGK+F +   L RHQ  HTGEKP++C    CGK FS   NLR
Sbjct: 37  LAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP--ECGKSFSQRANLR 94
Query: 60  THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKR 119
            H R HTG++PY CP   C K F+Q  +L++H  TH   K  K       CP       R
Sbjct: 95  AHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYK-------CPECGKSFSR 145
Query: 120 HD 121
            D
Sbjct: 146 ED 147

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 61/101 (60%), Gaps = 7/101 (6%)
Query: 6   HTHGPRV--HVC--AEC---GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 58
           H  GP    HVC   EC   GK+F    KL  H  VHTGEKPF C F GCGK F+   NL
Sbjct: 49  HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENL 108
Query: 59  RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           + H R HTG++P+ C F+GC+++FA S++ K H+  H   K
Sbjct: 109 KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 70
          + + C ECGK+F +SS L++HQ  HTGEKP++C    CGK FS   +L+ H R HTG++P
Sbjct: 3  KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCP--ECGKSFSQSSDLQKHQRTHTGEKP 60
Query: 71 YVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
          Y CP   C K F++S +L  H  TH   K
Sbjct: 61 YKCP--ECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 11 RVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          R+H C    C K + +SS LK H   HTGEKP++CT+EGC  RF+    L  H R HTG 
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73
Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +P+ C    CN+ F++S +L  H+  H
Sbjct: 74 KPFQCGV--CNRSFSRSDHLALHMKRH 98

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 11 RVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          R  +CA   C K + + S L+ H   HTGEKP+QC F+ C +RFS    L+ H R HTG 
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
          +P+ C    C +KF++S +LK+H  TH   K
Sbjct: 65 KPFQC--KTCQRKFSRSDHLKTHTRTHTGEK 93

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 12 VHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
           H C  A CGK + +SS LK H   HTGEKP+ C ++GCG +F+    L  H R HTG R
Sbjct: 5  THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR 64
Query: 70 PYVCPFDGCNKKFAQSTNLKSHILTH 95
          P+ C    C++ F++S +L  H+  H
Sbjct: 65 PFQC--QKCDRAFSRSDHLALHMKRH 88

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 12 VHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
           H C  A CGK + +SS LK H   HTGEKP+ C ++GCG +F+    L  H R HTG R
Sbjct: 6  THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR 65
Query: 70 PYVCPFDGCNKKFAQSTNLKSHILTH 95
          P+ C    C++ F++S +L  H+  H
Sbjct: 66 PFQC--QKCDRAFSRSDHLALHMKRH 89

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 1   MRKHLHTHGPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 58
           MR+H    G + H C    C K++     LK H   HTGEKP+ C  EGC K FS   + 
Sbjct: 59  MRRHT---GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDR 115
Query: 59  RTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 94
             H  R H+ ++PYVC   GC K++   ++L+ H+ T
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 77
          C + F +SS L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D 
Sbjct: 12 CDRRFSDSSNLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DI 67
Query: 78 CNKKFAQSTNLKSHILTHAKAK 99
          C +KFA+S   K H   H + K
Sbjct: 68 CGRKFARSDERKRHTKIHLRQK 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 77
          C + F  S++L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D 
Sbjct: 12 CDRRFSRSAELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DI 67
Query: 78 CNKKFAQSTNLKSHILTHAKAK 99
          C +KFA+S   K H   H + K
Sbjct: 68 CGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 77
          C + F +S  L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D 
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DI 67
Query: 78 CNKKFAQSTNLKSHILTHAKAK 99
          C +KFA+S   K H   H + K
Sbjct: 68 CGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 77
          C + F  S+ L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D 
Sbjct: 12 CDRRFSRSADLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DI 67
Query: 78 CNKKFAQSTNLKSHILTHAKAK 99
          C +KFA+S   K H   H + K
Sbjct: 68 CGRKFARSDERKRHTKIHLRQK 89

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 77
          C + F  S +L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D 
Sbjct: 12 CDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DI 67
Query: 78 CNKKFAQSTNLKSHILTHAKAK 99
          C +KFA+S   K H   H + K
Sbjct: 68 CGRKFARSDERKRHTKIHLRQK 89

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 77
          C + F  S +L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D 
Sbjct: 11 CDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DI 66
Query: 78 CNKKFAQSTNLKSHILTHAK 97
          C +KFA+S   K H   H +
Sbjct: 67 CGRKFARSDERKRHTKIHLR 86

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 77
          C + F  S +L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D 
Sbjct: 12 CDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DI 67
Query: 78 CNKKFAQSTNLKSHILTHAK 97
          C +KFA+S   K H   H +
Sbjct: 68 CGRKFARSDERKRHTKIHLR 87

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 56/131 (42%), Gaps = 35/131 (26%)
Query: 1   MRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           ++ HL  H G +   C E  C K F     L RH L HTGEK F C  +GC  RF+   N
Sbjct: 30  LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN 89
Query: 58  LRTH------VRI--------------------------HTGDRPYVCPFDGCNKKFAQS 85
           ++ H      ++I                          HT   PY CP +GC+K+F+  
Sbjct: 90  MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP 149
Query: 86  TNLKSHILTHA 96
           + LK H   HA
Sbjct: 150 SRLKRHEKVHA 160

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 16 AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF 75
          A+CG A+ ++ KL+ H   HTGEKPF C  EGC K F+   +L  H   HTG++ + C  
Sbjct: 9  ADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDS 68
Query: 76 DGCNKKFAQSTNLKSHI 92
          DGC+ +F    N+K H 
Sbjct: 69 DGCDLRFTTKANMKKHF 85

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP 74
          C  CGK+F  SS L  H L+H+  +P+ C +  CGKRF    +++ H  IHTG++P+ C 
Sbjct: 4  CKICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 75 FDGCNKKFAQSTNLKSHILTHA 96
             C K F+QS+NL +H   H 
Sbjct: 62 V--CGKAFSQSSNLITHSRKHT 81

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 17 ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD 76
           C + F + + L  H  +HTG+KPFQC    C + FS   +L  H+R HTG++P+ C  D
Sbjct: 11 SCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQQASLNAHIRTHTGEKPFAC--D 66
Query: 77 GCNKKFAQSTNLKSHILTHAKAK 99
           C +KFA       H   H + K
Sbjct: 67 ICGRKFATLHTRTRHTKIHLRQK 89

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 97
          E+P+ C  E C +RFS   NL TH+RIHTG +P+ C    C + F+Q T L  HI TH  
Sbjct: 2  ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQHTGLNQHIRTHTG 59
Query: 98 AK 99
           K
Sbjct: 60 EK 61

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 14 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD--RPY 71
           C  CGK F +   L RH+L H+GEKP+ C    CG RF     +  HVR H G   +PY
Sbjct: 9  ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPY 66
Query: 72 VCPFDGCNKKFAQSTNLKSHI 92
          +C    C K F++  +L  HI
Sbjct: 67 IC--QSCGKGFSRPDHLNGHI 85

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT 66
          C ECGKAF  SS L +HQ VHTGEKP++C    CGK FS +  L  H RIHT
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHT 66

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 9  GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          G +++ C +CGK+F   S+  RH  +H G +P+ C    CGK+F +  +L  H++IHTG 
Sbjct: 7  GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGI 63
Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKA 98
          +PY C    C K+F    +   H+ +  K+
Sbjct: 64 KPYECNI--CAKRFMWRDSFHRHVTSCTKS 91

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 11 RVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 65
          R H+C+   CGK + +SS LK H   HTGEKPF C+++GC +RF+    L  H R H
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 43 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          C+  GCGK +    +L+ H R HTG++P+ C + GC ++FA+S  L  H  TH
Sbjct: 20 CSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 70
          R + C ECGK+F  SS L +H+  HTGEKP++C  + CGK F    +L  H R+HTG  P
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 48  CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG 103
           CGK FS   +L  H R HTG++PY C  D C K F Q ++L  H   H  +    G
Sbjct: 24  CGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGPSSG 77

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 70
          C  C  +F     L  H+ VHTGEKP++C    CG +F+   NL+TH RIH+G++P
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP 73

>pdb|1ZNM|A Chain A, A Zinc Finger With An Artificial Beta-Turn, Original Sequence Taken From The Third Zinc Finger Domain Of The Human Transcriptional Repressor Protein Yy1 (Ying And Yang 1, A Delta Transcription Factor), Nmr, 34 Structures Length = 28

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 40 PFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
          PFQCTF  CGKRFSLDFNL+THV+IHTG
Sbjct: 1  PFQCTFXCCGKRFSLDFNLKTHVKIHTG 28

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
          CGKAF + ++LK HQ  HT + P++C  EGC KRFSL   L+ H ++H G
Sbjct: 9  CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 18 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
          CGKAF + ++LK HQ  HT + P++C  EGC KRFSL   L+ H ++H G
Sbjct: 9  CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 96
          +P+ C  E C +RFS    L  H+RIHTG +P+ C    C + F++S +L +HI TH 
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT 73

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 9  GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          GP  H C  CGK F    KLK H   HTG KP++C  + C    +   +L  H+RIH+ +
Sbjct: 7  GP--HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDE 62
Query: 69 RPY---VCPFDGCNKKFAQSTNLKSHILTH 95
          RP+   +CP+   N     S+ L  H+ +H
Sbjct: 63 RPFKCQICPYASRN-----SSQLTVHLRSH 87

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 14 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
          +C  CG+ F +S  L  H+  HT E+P+ C  + C K F    +LR H  IH+ ++P+ C
Sbjct: 19 ICKFCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDHLRDHRYIHSKEKPFKC 76
Query: 74 PFDGCNKKFAQSTNLKSHILTHAKA 98
              C K F QS  L  H   H + 
Sbjct: 77 --QECGKGFCQSRTLAVHKTLHMQT 99

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 91
          KPFQC    C + FS   +L TH+R HTG++P+ C  D C +KFA+S   K H
Sbjct: 2  KPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRH 50

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 31/108 (28%)
Query: 15  CAECGKAFVESSKLKRHQLVHTGEKPFQC-----------------------------TF 45
           C  C K F+    LK H   HTGEKPF+C                             T 
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 46  EGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 93
             C + F     LR H+  HTG+ PY C    C+++F Q  +L+SH++
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKC--SSCSQQFMQKKDLQSHMI 115

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 37 GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 96
          G    +C++  CGK F  ++ L  H+R HTG++PY C F  C    AQ T+L+ H+  H 
Sbjct: 1  GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHH 56
Query: 97 K 97
          K
Sbjct: 57 K 57

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKP 40
          + + C ECGKAF ++SKL RHQ VHTGEKP
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 9  GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          G   ++C  C +++V  + L+RH  +H+ EK + C +  C K F L      H   HTG+
Sbjct: 19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGE 76
Query: 69 RPYVCPFDGCNKKFAQSTNLKSHI 92
          R Y C    C K F     + SHI
Sbjct: 77 RRYQCL--ACGKSFINYQFMSSHI 98

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKP 40
          + + C ECGKAF ++SKL RHQ +HTGEKP
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 18 CGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD 76
          CG+ F     L  H+   H  +K F C    CGK F+   +L+ H+++H+  R Y+C F 
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Query: 77 G 77
          G
Sbjct: 75 G 75

>pdb|2EMM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 544- 576) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKP 40
          R H C ECGK+F++S+ L +HQ +HTGEKP
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 13 HVCAECGKAFVESSKLKRHQLVHTGEKP 40
          ++C ECGK+F++ S L RH+ +HTGEKP
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|2YTH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 479- 511) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 2/33 (6%)
Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 70
          EKPFQC  E CGKRF+ + +L +H R+HTG++P
Sbjct: 10 EKPFQC--EECGKRFTQNSHLHSHQRVHTGEKP 40

>pdb|2EOR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 255- 287) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 15 CAECGKAFVESSKLKRHQLVHTGEKP 40
          C ECGKAF+  S+L+ HQ +HTGEKP
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKP 40

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKP 40
          R ++C  CGKAF + S L +HQ +HTGEKP
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|2EMJ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 612- 644) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 70
          EKPF+C    CGK FS+   L TH RIHTG++P
Sbjct: 10 EKPFECAE--CGKSFSISSQLATHQRIHTGEKP 40

>pdb|2EQ0|A Chain A, Solution Structure Of The 8th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 15 CAECGKAFVESSKLKRHQLVHTGEKP 40
          C ECGK F  +S L RHQL+HTGEKP
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKP 40

>pdb|2EP3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 631- 663) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKP 40
          + + CAECGKAF + S L  HQ +HTGEKP
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKP 40

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKP 40
          + + C ECGKAF + + L +HQ +HTGEKP
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|2EMP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 536- 568) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKP 40
          + ++C ECGKAF   S L  HQ++HTGEKP
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKP 40

>pdb|2EN1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 563- 595) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 70
          EKPF+C  E CGKRF+ +  L +H R+HTG++P
Sbjct: 10 EKPFKC--EECGKRFTQNSQLHSHQRVHTGEKP 40

>pdb|2EMI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 547- 579) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKP 40
          R + C+ECGKAF++ S L  HQ +H GEKP
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQRIHRGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	318
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-52
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-37
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-30
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-24
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-35
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-32
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-30
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-32
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-20
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-32
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-29
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-24
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-32
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-32
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-31
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-22
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-29
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-28
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-28
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-27
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-27
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-27
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-19
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-26
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-25
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-24
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-25
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-25
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-24
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-22
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-21
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-22
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-20
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-18
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-21
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-20
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-20
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-17
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-19
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-17
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-14
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-14
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-14
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	9e-14
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-13
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-13
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-13
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-13
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-13
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-13
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-12
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-10
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-10
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	6e-10
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-08
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	1e-09
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	5e-07
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	5e-09
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	3e-06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	6e-07
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	7e-06
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	5e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	6e-05
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	9e-05
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	9e-04

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  166 bits (423), Expect = 4e-52
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT
Sbjct: 23  MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 82

Query: 61  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
           HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK
Sbjct: 83  HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  103 bits (259), Expect = 1e-27
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP 74
             C K F ++S +++H   H G +   C    CGK F     L+ H  +HTG++P+ C 
Sbjct: 10 HKGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCT 66

Query: 75 FDGCNKKFAQSTNLKSHILTH 95
          F+GC K+F+   NL++H+  H
Sbjct: 67 FEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 72.5 bits (179), Expect = 4e-16
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           +   C  +GC K F  +  +R H+  H G R +VC    C K F +S+ LK H L H
Sbjct: 3  PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVH 57

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 2   RKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQ 42
           R H+  H G R +VC    C K F +S+ LK H L H   K  Q
Sbjct: 81  RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  130 bits (328), Expect = 2e-37
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 6/101 (5%)

Query: 1   MRKH------LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSL 54
           +          + H      C   GK+F    KL  H  VHTGEKPF C F GCGK F+ 
Sbjct: 45  VTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR 104

Query: 55  DFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
             NL+ H R HTG++P+ C F+GC+++FA S++ K H+  H
Sbjct: 105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  110 bits (278), Expect = 4e-30
 Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 8/97 (8%)

Query: 6   HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG-------CGKRFSLDFNL 58
                       C + F    +L  H  +     P Q             GK F   + L
Sbjct: 20  DE-AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 59  RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
             H+R+HTG++P+ CPF GC K FA+S NLK H  TH
Sbjct: 79  VNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 96.2 bits (240), Expect = 1e-24
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 1   MRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           +  H+  H G +   C    CGK F  S  LK H+  HTGEKPF+C FEGC +RF+   +
Sbjct: 78  LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSD 137

Query: 58  LRTHVRIHTGDRPYVC 73
            + H+ +HT D+    
Sbjct: 138 RKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 81.2 bits (201), Expect = 7e-19
 Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 9/87 (10%)

Query: 16 AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF 75
             G +     +    + +   +       + C + FS    L THV +     P     
Sbjct: 1  GSSGSSGQPIKQELSCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNH 58

Query: 76 DG-------CNKKFAQSTNLKSHILTH 95
                     K F     L +HI  H
Sbjct: 59 VCYWEECPREGKSFKAKYKLVNHIRVH 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 2   RKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCT 44
           + H  TH G +   C    C + F  SS  K+H  VHT +K    +
Sbjct: 109 KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  125 bits (316), Expect = 1e-35
 Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 7/100 (7%)

Query: 2   RKHLHTHGPRVHVCAECG-----KAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF 56
            +H+H    +  VC   G     + F     L  H   HTGEKP +CTFEGC K +S   
Sbjct: 25  SEHIHG-ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE 83

Query: 57  NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL-TH 95
           NL+TH+R HTG++PY+C  +GC+K F+ +++   H   TH
Sbjct: 84  NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  116 bits (294), Expect = 2e-32
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 4/99 (4%)

Query: 1   MRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           +  H+  H G + H C    C K++     LK H   HTGEKP+ C  EGC K FS   +
Sbjct: 55  LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASD 114

Query: 58  LRTH-VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
              H  R H+ ++PYVC   GC K++   ++L+ H+ T 
Sbjct: 115 RAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  110 bits (277), Expect = 7e-30
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 15 CAECGKAFVESSKLKRH---QLVHTGEKPFQCTFEGC---GKRFSLDFNLRTHVRIHTGD 68
             C + F    +L  H   + +H   K F C + GC    + F   + L  H+R HTG+
Sbjct: 6  WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +P+ C F+GC K +++  NLK+H+ +H
Sbjct: 66 KPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 82.6 bits (205), Expect = 1e-19
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 2   RKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFN 57
           + HL +H G + ++C    C KAF  +S   +HQ   H+ EKP+ C   GC KR++   +
Sbjct: 86  KTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSS 145

Query: 58  LRTHVRIHTG 67
           LR HV+   G
Sbjct: 146 LRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 63.8 bits (156), Expect = 1e-12
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 8/64 (12%)

Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHV---RIHTGDRPYVCPFDGCN---KKFAQSTNLKSH 91
          E   +   +GC + F     L  H+    IH   + +VC + GC+   + F     L  H
Sbjct: 1  ETDCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 92 ILTH 95
          +  H
Sbjct: 59 MRRH 62

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  115 bits (290), Expect = 1e-32
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 65
           T        A CGK + +SS LK H   HTGEKP+ C ++GCG +F+    L  H R H
Sbjct: 2  RT-ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 66 TGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          TG RP+ C    C++ F++S +L  H+  H
Sbjct: 61 TGHRPFQCQK--CDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 81.8 bits (203), Expect = 6e-20
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 94
           T      C + GCGK ++   +L+ H+R HTG++PY C +DGC  KFA+S  L  H   
Sbjct: 2  RTATHT--CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

Query: 95 HAKAK 99
          H   +
Sbjct: 60 HTGHR 64

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  118 bits (298), Expect = 1e-32
 Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 3  KHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 59
                   + ++C  A+CG A+ ++ KL+ H   HTGEKPF C  EGC K F+   +L 
Sbjct: 2  GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           H   HTG++ + C  DGC+ +F    N+K H    
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  109 bits (275), Expect = 3e-29
 Identities = 37/99 (37%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 2   RKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 58
           + HL  H G +   C E  C K F     L RH L HTGEK F C  +GC  RF+   N+
Sbjct: 31  QAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM 90

Query: 59  RTHVRIHTG--DRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           + H           YVC F+ C K F +   LK H  +H
Sbjct: 91  KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 95.7 bits (239), Expect = 6e-24
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 1   MRKHLHTH-----GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLD 55
           M+KH +          V     CGKAF + ++LK HQ  HT + P++C  EGC KRFSL 
Sbjct: 90  MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP 149

Query: 56  FNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 94
             L+ H ++H G        D C+      T    H+  
Sbjct: 150 SRLKRHEKVHAGYPCKKD--DSCSFVGKTWTLYLKHVAE 186

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  115 bits (290), Expect = 2e-32
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 11 RVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          R+H C    C K + +SS LK H   HTGEKP++CT+EGC  RF+    L  H R HTG 
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +P+ C    CN+ F++S +L  H+  H
Sbjct: 74 KPFQCGV--CNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 85.8 bits (213), Expect = 2e-21
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 21 AFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 80
          +   S             +   C + GC K ++   +L+ H+R HTG++PY C ++GC+ 
Sbjct: 2  SSGSSGPDLEK------RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55

Query: 81 KFAQSTNLKSHILTHAKAK 99
          +FA+S  L  H   H  AK
Sbjct: 56 RFARSDELTRHYRKHTGAK 74

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 74.2 bits (183), Expect = 5e-17
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 2  RKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 58
          + HL TH G + + C    C   F  S +L RH   HTG KPFQC    C + FS   +L
Sbjct: 34 KAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC--GVCNRSFSRSDHL 91

Query: 59 RTHVRIHT 66
            H++ H 
Sbjct: 92 ALHMKRHQ 99

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  114 bits (288), Expect = 5e-32
 Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 5/97 (5%)

Query: 2   RKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 58
           + H   H G + + C   +C + F  S +LKRHQ  HTG KPFQC  + C ++FS   +L
Sbjct: 25  QMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRSDHL 82

Query: 59  RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           +TH R HTG++P+ C +  C KKFA+S  L  H   H
Sbjct: 83  KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  112 bits (282), Expect = 5e-31
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 4/85 (4%)

Query: 13 HVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 70
           +CA   C K + + S L+ H   HTGEKP+QC F+ C +RFS    L+ H R HTG +P
Sbjct: 7  FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 71 YVCPFDGCNKKFAQSTNLKSHILTH 95
          + C    C +KF++S +LK+H  TH
Sbjct: 67 FQC--KTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 88.3 bits (220), Expect = 5e-22
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query: 36 TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          + ++PF C + GC KR+    +L+ H R HTG++PY C F  C ++F++S  LK H   H
Sbjct: 2  SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  106 bits (267), Expect = 3e-29
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 17 ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD 76
           C + F +S  L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D
Sbjct: 11 SCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFAC--D 66

Query: 77 GCNKKFAQSTNLKSHILTH 95
           C +KFA+S   K H   H
Sbjct: 67 ICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 82.5 bits (205), Expect = 4e-20
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 2  RKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           +H+  H G +   C  C + F  S  L  H   HTGEKPF C    CG++F+     + 
Sbjct: 23 TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKR 80

Query: 61 HVRIHTG 67
          H +IH  
Sbjct: 81 HTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 77.1 bits (191), Expect = 4e-18
 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)

Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          E+P+ C  E C +RFS   +L  H+RIHTG +P+ C    C + F++S +L +HI TH
Sbjct: 2  ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTH 57

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%)

Query: 4  HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEK 39
          HL TH  R H       C  CG+ F  S + KRH  +H  +K
Sbjct: 49 HLTTH-IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score =  103 bits (260), Expect = 3e-28
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 12 VHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
          ++VC    CGKAF + ++LK HQ  HT + P++C  EGC KRFSL   L+ H ++H G  
Sbjct: 1  MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 70 PYVCPFDGCNKKFAQSTNLKSHI 92
                D C+      T    H+
Sbjct: 61 CKKD--DSCSFVGKTWTLYLKHV 81

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  102 bits (258), Expect = 8e-28
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 65
                 H C  CGK F    KLK H   HTG KP++C  + C    +   +L  H+RIH
Sbjct: 3  SG-SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIH 59

Query: 66 TGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          + +RP+ C    C      S+ L  H+ +H
Sbjct: 60 SDERPFKC--QICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 91.3 bits (228), Expect = 2e-23
 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 9/76 (11%)

Query: 4  HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           L TH  R H       C  C  A  +SS L +H  +H+ E+PF+C  + C         
Sbjct: 23 KLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQ 79

Query: 58 LRTHVRIHTGDRPYVC 73
          L  H+R HTGD     
Sbjct: 80 LTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 55.9 bits (136), Expect = 2e-10
 Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 2  RKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
           KHL  H   R   C  C  A   SS+L  H   HTG+     
Sbjct: 53 NKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score =  101 bits (255), Expect = 1e-27
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 6  HTHGPRVHVC--AECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHV 62
           + G     C    CG+ F     L  H+   H  +K F C    CGK F+   +L+ H+
Sbjct: 2  SS-GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60

Query: 63 RIHTGDRPYVCPFDGC 78
          ++H+  R Y+C F G 
Sbjct: 61 KLHSDTRDYICEFSGP 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 95.3 bits (238), Expect = 4e-25
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-HTGDRPYVCPFDGCNKKFAQSTNLKSHIL 93
           +G     C F GCG+ FS    L  H +  H   + + CP   C K F    +LK H+ 
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 94 TH 95
           H
Sbjct: 62 LH 63

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score =  101 bits (255), Expect = 1e-27
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 4/81 (4%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP 74
          C  CGK+F  SS L  H L+H+  +P+ C  + CGKRF    +++ H  IHTG++P+ C 
Sbjct: 4  CKICGKSFKRSSTLSTHLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHKC- 60

Query: 75 FDGCNKKFAQSTNLKSHILTH 95
             C K F+QS+NL +H   H
Sbjct: 61 -QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 81.7 bits (203), Expect = 5e-20
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 9/70 (12%)

Query: 4  HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           L TH   +H       C  CGK F + S +K+H  +HTGEKP +C  + CGK FS   N
Sbjct: 16 TLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC--QVCGKAFSQSSN 72

Query: 58 LRTHVRIHTG 67
          L TH R HTG
Sbjct: 73 LITHSRKHTG 82

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  100 bits (253), Expect = 7e-27
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 11/98 (11%)

Query: 4  HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
                          +C  CG+ F +S  L  H+  HT E+P+ C  + C K F    +
Sbjct: 4  GSSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDH 60

Query: 58 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          LR H  IH+ ++P+ C    C K F QS  L  H   H
Sbjct: 61 LRDHRYIHSKEKPFKC--QECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 89.4 bits (223), Expect = 1e-22
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 9/76 (11%)

Query: 4   HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           +L  H  R H       C  C KAF     L+ H+ +H+ EKPF+C  + CGK F     
Sbjct: 32  NLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC--QECGKGFCQSRT 88

Query: 58  LRTHVRIHTGDRPYVC 73
           L  H  +H        
Sbjct: 89  LAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 84.4 bits (210), Expect = 9e-21
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 25 SSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ 84
          SS     +L    +K F C F  CG+ F+  +NL  H R HT +RPY C  D C+K F +
Sbjct: 2  SSGSSGGRLPSKTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRR 57

Query: 85 STNLKSHILTH 95
            +L+ H   H
Sbjct: 58 QDHLRDHRYIH 68

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 57.4 bits (140), Expect = 6e-11
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 7/47 (14%)

Query: 4   HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
           HL  H   +H       C ECGK F +S  L  H+ +H         
Sbjct: 60  HLRDH-RYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  102 bits (258), Expect = 1e-26
 Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 11/98 (11%)

Query: 4   HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           HL  H  R H       C ECGK+F +   L RHQ  HTGEKP++C    CGK FS   N
Sbjct: 36  HLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP--ECGKSFSQRAN 92

Query: 58  LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           LR H R HTG++PY C    C K F+Q  +L++H  TH
Sbjct: 93  LRAHQRTHTGEKPYAC--PECGKSFSQLAHLRAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  102 bits (257), Expect = 1e-26
 Identities = 40/98 (40%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 4   HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
                   +        C ECGK+F  S  L  HQ  HTGEKP++C    CGK FS   +
Sbjct: 8   SSVAQ-AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCP--ECGKSFSDKKD 64

Query: 58  LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           L  H R HTG++PY C    C K F+Q  NL++H  TH
Sbjct: 65  LTRHQRTHTGEKPYKC--PECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  101 bits (255), Expect = 3e-26
 Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 11/98 (11%)

Query: 4   HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           +L  H  R H       C ECGK+F + + L+ HQ  HTGEKP++C    CGK FS + N
Sbjct: 92  NLRAHQ-RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDN 148

Query: 58  LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           L TH R HTG++PY C    C K F++   L  H  TH
Sbjct: 149 LHTHQRTHTGEKPYKC--PECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 85.6 bits (213), Expect = 3e-20
 Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 21 AFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 80
          +   SS       +  GEKP+ C  E CGK FS   +L  H R HTG++PY C    C K
Sbjct: 2  SEFGSSSSVAQAALEPGEKPYACP-E-CGKSFSRSDHLAEHQRTHTGEKPYKC--PECGK 57

Query: 81 KFAQSTNLKSHILTH 95
           F+   +L  H  TH
Sbjct: 58 SFSDKKDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 82.9 bits (206), Expect = 3e-19
 Identities = 33/73 (45%), Positives = 37/73 (50%), Gaps = 9/73 (12%)

Query: 4   HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
           HL  H  R H       C ECGK+F     L  HQ  HTGEKP++C  E CGK FS    
Sbjct: 120 HLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP-E-CGKSFSRRDA 176

Query: 58  LRTHVRIHTGDRP 70
           L  H R HTG + 
Sbjct: 177 LNVHQRTHTGKKT 189

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 99.1 bits (248), Expect = 2e-26
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 65
           + G     C  CGK F +   L RH+L H+GEKP+ C    CG RF     +  HVR H
Sbjct: 2  SS-GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSH 58

Query: 66 TG--DRPYVCPFDGCNKKFAQSTNLKSHI 92
           G   +PY+C    C K F++  +L  HI
Sbjct: 59 DGSVGKPYIC--QSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 74.1 bits (183), Expect = 6e-17
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 94
           +G     C  E CGK F   ++L  H   H+G++PY CP   C  +F +   +  H+ +
Sbjct: 2  SSGSSGVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRS 57

Query: 95 H 95
          H
Sbjct: 58 H 58

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 72.1 bits (178), Expect = 3e-16
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 12/73 (16%)

Query: 4  HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGE--KPFQCTFEGCGKRFSLD 55
          HL+ H    H       C  CG  F    ++  H   H G   KP+ C  + CGK FS  
Sbjct: 22 HLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC--QSCGKGFSRP 78

Query: 56 FNLRTHV-RIHTG 67
           +L  H+ ++H+G
Sbjct: 79 DHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 10/45 (22%)

Query: 4  HLHTHGPRVH--------VCAECGKAFVESSKLKRH-QLVHTGEK 39
           +  H  R H        +C  CGK F     L  H + VH+G  
Sbjct: 50 RMSYH-VRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 96.0 bits (240), Expect = 6e-25
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 14/97 (14%)

Query: 4   HLHTHGPRVH------VCAECGKAFVESSKLKRHQ---LVHTGEKPFQCTFEGCGKRFSL 54
           +L  H  R H       C +CGK +     L  H+    ++  E+ F C+   C + F  
Sbjct: 22  YLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRR 78

Query: 55  DFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 91
              LR H+  HTG+ PY C    C+++F Q  +L+SH
Sbjct: 79  RMELRLHMVSHTGEMPYKC--SSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 94.5 bits (236), Expect = 3e-24
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR---IHTGDRPY 71
          C  C K F+    LK H   HTGEKPF+C    CGK +    NL  H     ++  ++ +
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 72 VCPFDGCNKKFAQSTNLKSHILTH 95
           C    C + F +   L+ H+++H
Sbjct: 68 TC--SVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 76.4 bits (189), Expect = 1e-17
 Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 4/63 (6%)

Query: 6   HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH-VRI 64
           +    +V  C+ C + F    +L+ H + HTGE P++C+   C ++F    +L++H +++
Sbjct: 61  NR-SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCS--SCSQQFMQKKDLQSHMIKL 117

Query: 65  HTG 67
           H+G
Sbjct: 118 HSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 8/43 (18%)

Query: 4   HLHTHGPRVH------VCAECGKAFVESSKLKRHQL-VHTGEK 39
            L  H    H       C+ C + F++   L+ H + +H+G  
Sbjct: 81  ELRLH-MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 94.9 bits (237), Expect = 7e-25
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP 74
          C  C + F  S  L  H   HTGEKPF C  + CG++F+     + H  I     P +  
Sbjct: 6  CRICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQHI-LPILE- 61

Query: 75 FDGCNKKFAQSTNLKSHIL---TH 95
           D   +  +++ +L++ +      
Sbjct: 62 -DKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 71.4 bits (176), Expect = 4e-16
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 13/75 (17%)

Query: 4  HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN 57
          HL TH  R H       C  CG+ F  S + KRH+ +     P     +   +  S +++
Sbjct: 18 HLTTH-IRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE--DKVEELLSKNYH 73

Query: 58 LRTHV---RIHTGDR 69
          L   V   +   G+R
Sbjct: 74 LENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 4/41 (9%), Positives = 13/41 (31%), Gaps = 3/41 (7%)

Query: 2  RKHLHTHGPRVHVCAECGKAFVESSKLKRHQL---VHTGEK 39
          ++H         +  +  +   ++  L+          GE+
Sbjct: 48 KRHRDIQHILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 95.2 bits (238), Expect = 9e-25
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 17 ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD 76
          +CGK+F   S+  RH  +H G +P+ C    CGK+F +  +L  H++IHTG +PY C  +
Sbjct: 14 QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIHTGIKPYEC--N 69

Query: 77 GCNKKFAQSTNLKSHILTHAK 97
           C K+F    +   H+ +  K
Sbjct: 70 ICAKRFMWRDSFHRHVTSCTK 90

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 90.6 bits (226), Expect = 5e-23
 Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 13/95 (13%)

Query: 2   RKHLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLD 55
           +     H   +H       C  CGK F     L  H  +HTG KP++C    C KRF   
Sbjct: 22  KSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN--ICAKRFMWR 78

Query: 56  FNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS 90
            +   H  + +  + Y        +   +++   S
Sbjct: 79  DSF--HRHVTSCTKSYEA--AKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 72.1 bits (178), Expect = 4e-16
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 93
            +G+K + C    CGK F+       H+ +H G RPY C    C KKF    +L  H+ 
Sbjct: 4  GSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMK 58

Query: 94 TH 95
           H
Sbjct: 59 IH 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 38.2 bits (90), Expect = 5e-04
 Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 3/33 (9%)

Query: 63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
             +GD+ Y C    C K F   +    H+  H
Sbjct: 3  SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMH 32

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 92.4 bits (230), Expect = 3e-24
 Identities = 25/71 (35%), Positives = 39/71 (54%)

Query: 25 SSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ 84
          SS     Q+  +  +   C+  GCGK +    +L+ H R HTG++P+ C + GC ++FA+
Sbjct: 2  SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 85 STNLKSHILTH 95
          S  L  H  TH
Sbjct: 62 SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 79.7 bits (197), Expect = 3e-19
 Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 9  GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 65
            R H+C    CGK + +SS LK H   HTGEKPF C+++GC +RF+    L  H R H
Sbjct: 14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 88.7 bits (221), Expect = 1e-22
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 1  MRKHLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSL 54
          M  H H H   +        C  C  +F     L  H+ VHTGEKP++C    CG +F+ 
Sbjct: 1  MGHHHHHH-SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNR 57

Query: 55 DFNLRTHVRIHTGDRPY 71
            NL+TH RIH+G++PY
Sbjct: 58 PANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 83.7 bits (208), Expect = 7e-21
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)

Query: 25 SSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ 84
                H  +   +KP++C  + C   F    NL +H  +HTG++PY C  + C  +F +
Sbjct: 2  GHHHHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNR 57

Query: 85 STNLKSHILTH 95
            NLK+H   H
Sbjct: 58 PANLKTHTRIH 68

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 87.7 bits (218), Expect = 2e-22
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 25 SSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ 84
           + L  +       +P+ C  E C +RFS    L  H+RIHTG +P+ C    C + F++
Sbjct: 6  MNNLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSR 61

Query: 85 STNLKSHILTH 95
          S +L +HI TH
Sbjct: 62 SDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 68.1 bits (167), Expect = 5e-15
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 1  MRKHLHTHGPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 58
          +  ++     R + C    C + F  S +L RH  +HTG+KPFQC    C + FS   +L
Sbjct: 9  LLNYVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHL 65

Query: 59 RTHVRIHT 66
           TH+R HT
Sbjct: 66 TTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 57 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
          NL  +V      RPY CP + C+++F++S  L  HI  H   K
Sbjct: 8  NLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQK 48

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 86.8 bits (216), Expect = 6e-22
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 27 KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG--DRPYVCPFDGCNKKFAQ 84
                  H+GEKP++C    C  RF+    ++ H+          + CP   C+   A+
Sbjct: 2  SSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIAR 57

Query: 85 STNLKSHILTH 95
           ++L  H+   
Sbjct: 58 KSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.4 bits (202), Expect = 5e-20
 Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 6/74 (8%)

Query: 2  RKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE--KPFQCTFEGCGKRFSLDFNL 58
               TH G + + C  C   F +S  +K H L    E    F C    C    +   +L
Sbjct: 4  GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDL 61

Query: 59 RTHVR-IHTGDRPY 71
            H+R  H+   P 
Sbjct: 62 GVHLRKQHSYSGPS 75

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 84.8 bits (211), Expect = 3e-21
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 3/66 (4%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 65
          H+ G + + C ECGKAF  SS L +HQ VHTGEKP++C    CGK FS +  L  H RIH
Sbjct: 9  HS-GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGLINHQRIH 65

Query: 66 TGDRPY 71
          T     
Sbjct: 66 TSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 76.4 bits (189), Expect = 3e-18
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 28 LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN 87
                +H+GEKP+ C    CGK FS    L  H R+HTG++PY C    C K F+Q++ 
Sbjct: 2  SSGSSGIHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSG 57

Query: 88 LKSHILTH 95
          L +H   H
Sbjct: 58 LINHQRIH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 83.6 bits (208), Expect = 9e-21
 Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 2  RKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           +        R + C ECGK+F  SS L +H+  HTGEKP++C  + CGK F    +L  
Sbjct: 7  GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIG 64

Query: 61 HVRIHTGDRPY 71
          H R+HTG  P 
Sbjct: 65 HHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 80.9 bits (201), Expect = 9e-20
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)

Query: 25 SSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ 84
          S    R +      + ++C  + CGK FS   +L  H R HTG++PY C  D C K F Q
Sbjct: 3  SGSSGRSEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQ 58

Query: 85 STNLKSHILTH 95
           ++L  H   H
Sbjct: 59 RSHLIGHHRVH 69

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 82.6 bits (205), Expect = 2e-20
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 6/68 (8%)

Query: 32 QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI--HTGDRPYVCPFDGCNKKFAQSTNLK 89
          +    GE  ++C    C + ++   N   H         + Y CPF  C K+F +  N+ 
Sbjct: 2  EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMT 57

Query: 90 SHILTHAK 97
          +H+    K
Sbjct: 58 AHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 74.1 bits (183), Expect = 2e-17
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 5/64 (7%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLV--HTGEKPFQCTFEGCGKRFSLDFNLRTHVR 63
             G   + C  C + +   S   RH +       K + C F  C K F+   N+  HV+
Sbjct: 5  KE-GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVK 61

Query: 64 IHTG 67
          I   
Sbjct: 62 IIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 6/37 (16%), Positives = 10/37 (27%), Gaps = 1/37 (2%)

Query: 1  MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTG 37
                    +V+ C  C K F     +  H  +   
Sbjct: 30 YVTSHKR-NVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 82.6 bits (205), Expect = 3e-20
 Identities = 17/89 (19%), Positives = 25/89 (28%), Gaps = 15/89 (16%)

Query: 4  HLHTHGPRVH------VCAECGKAFVESSKLKRHQLVHTGE----KPFQCTFEGCGKRFS 53
             + G R H       C+ C K F +   L  H   +         F C+   CGK F+
Sbjct: 2  SSGSSG-RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFT 58

Query: 54 LDFNLRTHVRIHTGDRPYVCPFDGCNKKF 82
              +  H     G        +      
Sbjct: 59 RRNTMARHADNCAGPDGVEG--ENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 73.3 bits (181), Expect = 6e-17
 Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 8/72 (11%)

Query: 28 LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG----DRPYVCPFDGCNKKFA 83
                 HTGEKP+ C+   C K F     L  H + +         +VC    C K F 
Sbjct: 3  SGSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVC--SKCGKTFT 58

Query: 84 QSTNLKSHILTH 95
          +   +  H    
Sbjct: 59 RRNTMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.5 bits (145), Expect = 8e-12
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 13/61 (21%)

Query: 2  RKHLHTHGPRVH----------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKR 51
          ++ L  H  + +          VC++CGK F   + + RH     G    +   E  G  
Sbjct: 28 KQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEG--ENSGPS 84

Query: 52 F 52
           
Sbjct: 85 S 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 57 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +  +  R HTG++PY C    C+K F Q   L  H   +
Sbjct: 2  SSGSSGRTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRY 38

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 79.9 bits (198), Expect = 2e-19
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 93
            +   P +C+   C    S    LR H RIH  DRP+ C  + C+    Q +NL  H+ 
Sbjct: 3  SGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMK 58

Query: 94 TH 95
            
Sbjct: 59 KF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 78.3 bits (194), Expect = 7e-19
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP 74
          C+EC  +    + L+ H+ +H  ++PF+C    C        NL  H++   GD      
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 6/33 (18%), Positives = 10/33 (30%), Gaps = 2/33 (6%)

Query: 63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
             +   P  C    C+   +    L+ H   H
Sbjct: 2  SSGSSGHPEKC--SECSYSCSSKAALRIHERIH 32

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 79.0 bits (195), Expect = 5e-19
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 7/71 (9%)

Query: 35  HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT---GDRPYVCPFDGCNKKFAQSTNLKSH 91
            +G    QC    CG       +L  H R H        + C F  C K+F +  ++ +H
Sbjct: 2   SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAH 57

Query: 92  ILTHAKAKLLK 102
                 A LL 
Sbjct: 58  RSKSHPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.5 bits (173), Expect = 6e-16
 Identities = 16/65 (24%), Positives = 20/65 (30%), Gaps = 5/65 (7%)

Query: 13 HVCAECGKAFVESSKLKRHQLVHT---GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
            C  CG    + + L  HQ  H        F C F  CGKRF    ++  H        
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPAL 65

Query: 70 PYVCP 74
               
Sbjct: 66 LLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 12/52 (23%), Positives = 15/52 (28%), Gaps = 1/52 (1%)

Query: 1  MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF 52
           RKH  T       C  CGK F +   +  H+             E  G   
Sbjct: 27 QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ-ESSGPSS 77

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 77.9 bits (193), Expect = 8e-19
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 13 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGD 68
           VC  C +AF     LKRH   HT EKP+ C    C + F+    L  H  +IH+G+
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 91
          + F C    C + F+   +L+ H R HT ++PY C    CN+ F +   L  H
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 8/43 (18%)

Query: 4  HLHTHGPRVH------VCAECGKAFVESSKLKRH-QLVHTGEK 39
          HL  H  R H       C  C +AF     L RH Q +H+G  
Sbjct: 17 HLKRH-YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 72.7 bits (179), Expect = 5e-17
 Identities = 20/43 (46%), Positives = 23/43 (53%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKPF CT+ GCG RFS    L  H R H+G +P   
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 60.0 bits (146), Expect = 2e-12
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
          +     TG++P+ C + GC  +F++S  L  H  +H+  K
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 53.5 bits (129), Expect = 5e-10
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 4  HLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G +   C    CG  F  S +L RH+  H+G KP   +
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 71
                GEKP+ C  E CG RF     L++H+RIHTG  P 
Sbjct: 2  SSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.4 bits (119), Expect = 9e-09
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 41
             +  G + + C  CG  F     LK H  +HTG  P 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
                G++PY C  + C  +F     LKSH+  H
Sbjct: 2  SSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIH 34

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 65.2 bits (160), Expect = 2e-14
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKPF+C    CGK FS+   L TH RIHTG++P   
Sbjct: 2  SSGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G +   CAECGK+F  SS+L  HQ +HTGEKP   +
Sbjct: 2  SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P+ C    C K F+ S+ L +H   H
Sbjct: 2  SSGSSGTGEKPFEC--AECGKSFSISSQLATHQRIH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 3e-14
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C+   CGK F+    L  H + HTG+R    
Sbjct: 2  SSGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C++CGKAF   S L  HQ  HTGE+    +
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F + + L  H  +H
Sbjct: 2  SSGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 3e-14
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKPF+C+   C K F+   NL  H R HTG++P   
Sbjct: 2  SSGSSGTGEKPFECS--ECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G +   C+EC KAF   S L  HQ  HTGEKP   +
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P+ C    C K F   +NL  H  TH
Sbjct: 2  SSGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 64.9 bits (159), Expect = 4e-14
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TG KP+ C+   C K FSL   L  H R HTG +P   
Sbjct: 2  SSGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C++C K F   S+L  HQ  HTG KP   +
Sbjct: 2  SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG +PY C    C K F+  + L  H  +H
Sbjct: 2  SSGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 64.5 bits (158), Expect = 4e-14
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP+ C  + CGK F     L  H R+H+G++P   
Sbjct: 2  SSGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
           T G + + C ECGK+F  +S L +HQ VH+GEKP   +
Sbjct: 7  GT-GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F  ++ L  H   H
Sbjct: 2  SSGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 4e-14
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +GEKPF+C  E CGKRF+ +  L +H R+HTG++P   
Sbjct: 2  SSGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 17/30 (56%), Positives = 21/30 (70%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C ECGK F ++S+L  HQ VHTGEKP   +
Sbjct: 15 CEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++P+ C  + C K+F Q++ L SH   H
Sbjct: 2  SSGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 4e-14
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C  E CGK ++  FNL  H ++HTG+RP   
Sbjct: 3  SGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C +CGK +     L  HQ VHTGE+P   +
Sbjct: 2  SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K +    NL  H   H
Sbjct: 2  SSGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 6e-14
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +GEKPF+C  + CGK F  + +L +H+RIHTG++P   
Sbjct: 2  SSGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G +   C ECGKAF ++  L  H  +HTGEKP   +
Sbjct: 2  SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++P+ C    C K F Q+ +L SH+  H
Sbjct: 2  SSGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.0 bits (157), Expect = 7e-14
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGE+P+ CT   CGK F+   NL  H +IHTG++P   
Sbjct: 2  SSGSSGTGERPYICT--VCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
           T G R ++C  CGKAF + S L +HQ +HTGEKP   
Sbjct: 7  GT-GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG+RPY+C    C K F   +NL  H   H
Sbjct: 2  SSGSSGTGERPYIC--TVCGKAFTDRSNLIKHQKIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 8e-14
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP+ C  E CGK F  D  L+ H RIHTG++P   
Sbjct: 2  SSGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGKAF+  S+L+ HQ +HTGEKP   +
Sbjct: 2  SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F   + L+ H   H
Sbjct: 2  SSGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIH 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 63.7 bits (156), Expect = 8e-14
 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 71
                GEKP++C  E CG RF    +LR HV IHTG  P 
Sbjct: 2  SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 41
             +  G + + C  CG  FV+ + L+ H L+HTG  P 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
                G++PY C  + C  +F Q  +L++H+L H
Sbjct: 2  SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIH 34

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 8e-14
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +GEKP+ C  + CGK F L   L  H RIHTG++P   
Sbjct: 2  SSGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + +VC  CGKAF  S++L RHQ +HTGEKP   +
Sbjct: 2  SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++PYVC  D C K F  S  L  H   H
Sbjct: 2  SSGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 9e-14
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK F+   NL  H RIHTG++P   
Sbjct: 2  SSGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G + + C ECGKAF + + L +HQ +HTGEKP   +
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K FAQ  NL  H   H
Sbjct: 2  SSGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGE PF C+   CGK F+   NL  H +IHTG+RP   
Sbjct: 3  SGSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G    +C+ECGK F   + L  HQ +HTGE+P   +
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG+ P++C    C K F   TNL  H   H
Sbjct: 2  SSGSSGTGENPFIC--SECGKVFTHKTNLIIHQKIH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               +GEKPF+C  E CGK F  +    +H R H+G++P   
Sbjct: 3  SGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 49
             +  G +   C ECGK F  +S+   HQ  H+GEKP   +    G
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS---SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++P+ C  + C K F  ++   SH  +H
Sbjct: 2  SSGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKPF+C    CGK ++   +L  H R+HTG++P   
Sbjct: 2  SSGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G +   C ECGK++ +   L +HQ VHTGEKP   +
Sbjct: 2  SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P+ C    C K + Q  +L  H   H
Sbjct: 2  SSGSSGTGEKPFKC--GECGKSYNQRVHLTQHQRVH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C+   CGK F+    LR H + HTG+R    
Sbjct: 3  SGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G + + C++CGK+F   S+L+ HQ  HTGE+    +
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F   + L+ H   H
Sbjct: 2  SSGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +GEKPFQC  E CGKRF+ + +L +H R+HTG++P   
Sbjct: 2  SSGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G +   C ECGK F ++S L  HQ VHTGEKP   +
Sbjct: 2  SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++P+ C  + C K+F Q+++L SH   H
Sbjct: 2  SSGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TG KP+ C    CGK FS+  +L TH  IHTG++P   
Sbjct: 2  SSGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 17/29 (58%), Positives = 19/29 (65%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQC 43
          C ECGKAF   S L  HQ++HTGEKP   
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG +PY+C  + C K F+  ++L +H + H
Sbjct: 2  SSGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                 GEKP+ C+   CGK FS    L  H+R H+G++P   
Sbjct: 2  SSGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G + + C+ECGKAF   S L  H   H+GEKP   +
Sbjct: 3  SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +      G++PY C    C K F+  + L  H+ TH
Sbjct: 2  SSGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               + EKP++C  E CGK ++   NL  H R+H G++    
Sbjct: 3  SGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +    + + C +CGK +     L  HQ VH GEK    +
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     + ++PY C  + C K + +  NL  H   H
Sbjct: 2  SSGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK F+   NL TH +IHTG++P   
Sbjct: 2  SSGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
           T G + + CAECGKAF + S L  HQ +HTGEKP   
Sbjct: 7  GT-GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F   +NL +H   H
Sbjct: 2  SSGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TG KP+ C    CGK F     L  H R HTG+     
Sbjct: 2  SSGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
              +  G + +VC ECGKAF   S L  H   HTGE     
Sbjct: 2  SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG +PYVC  + C K F   + L  H  TH
Sbjct: 2  SSGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TG+KPF+CT   CGK F    NL TH RIHTG++    
Sbjct: 3  SGSSGTGQKPFECT--HCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G +   C  CGK+F     L  HQ +HTGEK    +
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG +P+ C    C K F    NL +H   H
Sbjct: 2  SSGSSGTGQKPFEC--THCGKSFRAKGNLVTHQRIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP +C    CGK FS +  L  H RIHTG+ P   
Sbjct: 2  SSGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + H C ECGK+F  +S+L  HQ +HTGE P   +
Sbjct: 2  SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P+ C    C K F+ ++ L  H   H
Sbjct: 2  SSGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGE P++C    CGK FS  + L +H R H G++P   
Sbjct: 2  SSGSSGTGENPYECH--ECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G   + C ECGKAF    +L  HQ  H GEKP   +
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG+ PY C    C K F++   L SH  TH
Sbjct: 2  SSGSSGTGENPYEC--HECGKAFSRKYQLISHQRTH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +GEKP++C    CGK F    +L  H RIHTG RP   
Sbjct: 2  SSGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C+ECGKAF   + L  H+ +HTG +P   +
Sbjct: 2  SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++PY C    C K F + T+L  H   H
Sbjct: 2  SSGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +GEKP++C    CGK F+ + +L  H RIHTG++P   
Sbjct: 2  SSGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C ECGK F ++S L  H  +HTGEKP   +
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++PY C  + C K F Q+++L +H   H
Sbjct: 2  SSGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C  + CGK F +  +L  H  +H+G+RP   
Sbjct: 2  SSGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C  CGKAF  SS L +H  VH+GE+P   +
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
               TG++PY C    C K F  S++L  H   H
Sbjct: 3  SGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK F  + +L  H  IHTG++P   
Sbjct: 2  SSGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 18/30 (60%), Positives = 21/30 (70%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C ECGK F  +S L RHQL+HTGEKP   +
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F ++++L  H L H
Sbjct: 2  SSGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.6 bits (153), Expect = 2e-13
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C  E CGK F    +L TH  +HTG++P   
Sbjct: 3  SGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C ECGK F+    L  H +VHTGEKP   +
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F    +L +H + H
Sbjct: 2  SSGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP+ C    CGK F++  NL  H +IHT  +P   
Sbjct: 3  SGSSGTGEKPYICA--ECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
           T G + ++CAECGKAF   S L +HQ +HT +KP   +
Sbjct: 7  GT-GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY+C    C K F   +NL  H   H
Sbjct: 2  SSGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKPF+C    CGK FS    L  H ++HTG++P   
Sbjct: 2  SSGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G +   C ECGK F   S L  H  +HTGEKP   +
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P+ C    C K F++ + L  H   H
Sbjct: 2  SSGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK F+ + +L  H RIHTG +P   
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGK F ++S L  HQ +HTG KP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F Q+++L +H   H
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 2e-13
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKPFQC  + CG  FS   +L  H+R H    P   
Sbjct: 3  SGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.0 bits (128), Expect = 5e-10
 Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
             +  G +   C ECG  F  S  L +H   H    P   
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P+ C    C   F+ S +L  H+ +H
Sbjct: 2  SSGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGE+P +C    CGK F    +L  H RIHTG++P   
Sbjct: 2  SSGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G R H C ECGK+F++S+ L +HQ +HTGEKP   +
Sbjct: 3  SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG+RP+ C  + C K F QS +L  H   H
Sbjct: 2  SSGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK FS    L  H RIHTG++P   
Sbjct: 2  SSGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGKAF ++SKL RHQ +HTGEKP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F+Q++ L  H   H
Sbjct: 2  SSGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                GEK ++C  + CGK FS   +L+TH R+HTG++P   
Sbjct: 3  SGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 17/30 (56%), Positives = 20/30 (66%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C  CGK F +SS L+ HQ VHTGEKP   +
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +      G++ Y C  D C K+F+QS++L++H   H
Sbjct: 2  SSGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               +GEKP++C    CGK +    +L  H R+HTG++    
Sbjct: 3  SGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGK +     L  HQ VHTGEK    +
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++PY C    C K + +  +L  H   H
Sbjct: 2  SSGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGE+ ++C+   CGK F+    L  H RIHTG++P   
Sbjct: 2  SSGSSGTGERHYECS--ECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G R + C+ECGKAF   S L  HQ +HTGEKP   +
Sbjct: 2  SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG+R Y C    C K FA+ + L  H   H
Sbjct: 2  SSGSSGTGERHYEC--SECGKAFARKSTLIMHQRIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK F+ + +L  H  IHTG++P   
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 16/30 (53%), Positives = 21/30 (70%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C ECGK F ++S L RH+ +HTGEKP   +
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F Q+++L  H   H
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    C K F+   +L  H + HTG++P   
Sbjct: 2  SSGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C  C KAF + + L +HQ  HTGEKP   +
Sbjct: 2  SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C+K F Q  +L  H  TH
Sbjct: 2  SSGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.1 bits (152), Expect = 3e-13
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C    C K F+   NL  H R HTG+     
Sbjct: 3  SGSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
             +  G + + C EC KAF   S L  HQ  HTGE     
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F   +NL  H  TH
Sbjct: 2  SSGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK F+    L  H +IHTG++P   
Sbjct: 2  SSGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C+ CGK+F + S+L  HQ +HTGEKP   +
Sbjct: 2  SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F + + L  H   H
Sbjct: 2  SSGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEK + C  + CGK FS    L  H R+H+G++P   
Sbjct: 3  SGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G +++ C ECGK+F  +  L +H+ +H+GEKP   +
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++ Y C    C K F+++  L  H   H
Sbjct: 2  SSGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TG++P++C    CGK F    +L  H R HTG++P   
Sbjct: 2  SSGSSGTGQRPYECI--ECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 47
              +  G R + C ECGKAF   S L  H+  HTGEKP   +  G
Sbjct: 2  SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS-SG 46

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG RPY C    C K F   ++L  H  +H
Sbjct: 2  SSGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 3e-13
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK F  +  L  H RIHTG++P   
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 17/30 (56%), Positives = 20/30 (66%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C ECGK F  +S L RHQ +HTGEKP   +
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F  ++ L  H   H
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C+   CGK F     L  H RIHTG+ P   
Sbjct: 3  SGSSGTGEKPYECS--DCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
              +  G + + C++CGK+F++ S+L  HQ +HTGE P   
Sbjct: 2  SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F + + L  H   H
Sbjct: 2  SSGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK F    +L  H   H+G++P   
Sbjct: 2  SSGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGKAF   S L  HQ  H+GEKP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F   ++L  H  TH
Sbjct: 2  SSGSSGTGEKPYKC--NECGKAFRARSSLAIHQATH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C    CGK FS+  +L TH  IHTG +P   
Sbjct: 2  SSGSSGTGEKPYECN--QCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C +CGKAF   S L  HQ +HTG+KP   +
Sbjct: 2  SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F+  ++L +H   H
Sbjct: 2  SSGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 62.1 bits (152), Expect = 4e-13
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C  + CGK FS   +L  H R+HTG++P   
Sbjct: 2  SSGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 55.2 bits (134), Expect = 9e-11
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGKAF +++ L +HQ VHTGEKP   +
Sbjct: 2  SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F+Q+T+L  H   H
Sbjct: 2  SSGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEK ++C    CGK FS +  L  H +IHTG++P   
Sbjct: 2  SSGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGK F  +S+L +HQ +HTGEKP   +
Sbjct: 2  SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++ Y C  + C K F++++ L  H   H
Sbjct: 2  SSGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP++C+   CGK FS   +L  H RIH+G +P   
Sbjct: 2  SSGSSGTGEKPYECS--VCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C+ CGKAF     L  HQ +H+G+KP   +
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 7e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
               TG++PY C    C K F+   +L  H   H
Sbjct: 3  SGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TG K F+CT   CGK F+    L  H +IHTG++P   
Sbjct: 2  SSGSSGTGGKHFECT--ECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
           T G +   C ECGKAF   S L  HQ +HTGEKP   +
Sbjct: 7  GT-GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG + + C    C K F + + L  H   H
Sbjct: 2  SSGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 5e-13
 Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKPF C    CGK FS    L  H RIHTG++P   
Sbjct: 3  SGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G +   C +CGKAF +   L +H+ +HTGEKP   +
Sbjct: 2  SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P+ C    C K F+    L  H   H
Sbjct: 2  SSGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 6e-13
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C    CGK F    NL TH  IHTG++P   
Sbjct: 3  SGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 17/30 (56%), Positives = 20/30 (66%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C ECGKAF   S L  HQ++HTGEKP   +
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F   +NL +H + H
Sbjct: 2  SSGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 6e-13
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKPF+C  + CGK F     L  H  +HT ++P   
Sbjct: 3  SGSSGTGEKPFKC--DICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C  CGK+F   S+L RH +VHT EKP   +
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P+ C  D C K F   + L  H + H
Sbjct: 2  SSGSSGTGEKPFKC--DICGKSFCGRSRLNRHSMVH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 6e-13
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C  + C K F    +L  H RIHTG++P   
Sbjct: 3  SGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C  C K+F   S L  HQ +HTGEKP   +
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  D C+K F   ++L  H   H
Sbjct: 2  SSGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.4 bits (150), Expect = 6e-13
 Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +GEKP++C    CGK F     L  H R H G      
Sbjct: 2  SSGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
             +  G + + C ECGKAF+  S L  H+  H G      
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++PY C  + C K F   + L  H  TH
Sbjct: 2  SSGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 7e-13
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP+ C    CGK F L  +L  H+R+HT +     
Sbjct: 2  SSGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C  CGKAFV S+ L +H  VHT E     +
Sbjct: 2  SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
               TG++PY C  + C K F  S +L  H+  H
Sbjct: 3  SGSSGTGEKPYSC--NVCGKAFVLSAHLNQHLRVH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 8e-13
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                TGEKP +CT   CGK F     L  H R H  D+    
Sbjct: 2  SSGSSGTGEKPCKCT--ECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G +   C ECGKAF   S+L  HQ  H  +K    +
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++P  C    C K F   + L  H  TH
Sbjct: 2  SSGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.1 bits (149), Expect = 8e-13
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C    CGK F  + +   H R+HTG RP   
Sbjct: 3  SGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G + + C ECGKAF ++S   +HQ +HTG++P   +
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C    C K F  +++   H   H
Sbjct: 2  SSGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 8e-13
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                G+K F+C    C K F+   +L  H RIHTG++P   
Sbjct: 3  SGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 16/30 (53%), Positives = 19/30 (63%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C EC K F +SS L  HQ +HTGEKP   +
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +      G + + C  + C K F QS++L  H   H
Sbjct: 2  SSGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 61.0 bits (149), Expect = 9e-13
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                GEK ++C    C   FS   +LR H  +H G++P   
Sbjct: 3  SGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G +   C EC   F ++S L+ HQ VH GEKP   +
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +      G++ + C    C+  F+Q+++L+ H   H
Sbjct: 2  SSGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP+ C    CGK F    +L  H RIHTG++P   
Sbjct: 3  SGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + ++C ECGK+F++ S L RH+ +HTGEKP   +
Sbjct: 2  SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY+C  + C K F Q ++L  H   H
Sbjct: 2  SSGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               +GEKP+ C    CGK FS    L  H R HTG++P   
Sbjct: 3  SGSSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G + + C ECGK F + S L  HQ  HTGEKP   +
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G++PY C  + C K F+Q + L +H  TH
Sbjct: 2  SSGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TG KP+QC    CGK FS    L  H R+HTG++P   
Sbjct: 3  SGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGKAF ++SKL RHQ VHTGEKP   +
Sbjct: 2  SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG +PY C  + C K F+Q++ L  H   H
Sbjct: 2  SSGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVH 35

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 62.3 bits (151), Expect = 1e-12
 Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 7/73 (9%)

Query: 8  HGPRVHVCAECGKAFVESSKLKRH-QLVHTGEKP---FQCTFEGC---GKRFSLDFNLRT 60
                    C + F    +L  H  + H G        C +E C   GK F   + L  
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 61 HVRIHTGDRPYVC 73
          H+R+HTG++    
Sbjct: 81 HIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 52.3 bits (125), Expect = 4e-09
 Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 14/57 (24%)

Query: 2  RKHLHTHGPRVHV--------------CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             L TH    HV              C   GK+F    KL  H  VHTGEK    +
Sbjct: 38 MHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.6 bits (118), Expect = 3e-08
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 9/69 (13%)

Query: 34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRP---YVCPFDGC---NKKFAQST 86
          +   +       + C + FS    L THV   H G      +VC ++ C    K F    
Sbjct: 19 IDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 87 NLKSHILTH 95
           L +HI  H
Sbjct: 77 KLVNHIRVH 85

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGE+ ++C    CGK F     L  H RIH G++P   
Sbjct: 3  SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G R + C+ECGKAF++ S L  HQ +H GEKP   +
Sbjct: 2  SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG+R Y C    C K F Q + L  H   H
Sbjct: 2  SSGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                G  P++C+   C K FS    L  H R+HT ++P   
Sbjct: 3  SGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G   + C++C K+F    +L  HQ +HT EKP   +
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 10/36 (27%), Positives = 12/36 (33%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +      G  PY C    C K F+    L  H   H
Sbjct: 2  SSGSSGAGVNPYKC--SQCEKSFSGKLRLLVHQRMH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                GEKP+QC    CGK FS  + L  H   HT ++P   
Sbjct: 3  SGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C+ECGK+F  S +L +H + HT EKP   +
Sbjct: 2  SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +      G++PY C    C K F+ S  L  H +TH
Sbjct: 2  SSGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C  + C K FS   +L  H R+H+G++P   
Sbjct: 3  SGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C  C KAF   + L +HQ VH+GEKP   +
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  D C K F+   +L  H   H
Sbjct: 2  SSGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +GE+PF+C    CGK F    +L  H+R+H+ ++    
Sbjct: 2  SSGSSGSGERPFKC--NECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G R   C ECGK F   S L  H  +H+ EK    +
Sbjct: 2  SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G+RP+ C  + C K F + ++L  H+  H
Sbjct: 2  SSGSSGSGERPFKC--NECGKGFGRRSHLAGHLRLH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               +GE+P+ C  E CGK F    +L  H++ H  ++    
Sbjct: 3  SGSSGSGERPYGCN-E-CGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
           + G R + C ECGK F   S L  H   H  EK    +
Sbjct: 7  GS-GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
               +G+RPY C  + C K F + ++L  H+  H
Sbjct: 3  SGSSGSGERPYGC--NECGKNFGRHSHLIEHLKRH 35

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQ 84
               +  KP+ C  + CGK FS   +L  H+ ++HT +RP+ C         + 
Sbjct: 3  SGSSGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 15 CAECGKAFVESSKLKRH-QLVHTGEKPFQCTFEGCGKRFS 53
          C  CGK F     L  H + VHT E+P +C  +      S
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 92
          +     +  +PY+C    C K F++  +L  HI
Sbjct: 2  SSGSSGSVGKPYIC--QSCGKGFSRPDHLNGHI 32

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C    CGK F+ + +L  H  IHTG++P   
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGK F ++S L RH+ +HTGEKP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F Q+++L  H   H
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TG+KP++C    CGK F+ + +L  H  IHTG++P   
Sbjct: 3  SGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 16/30 (53%), Positives = 21/30 (70%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
          C ECGK F ++S L RH+ +HTGEKP   +
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG +PY C  + C K F Q+++L  H   H
Sbjct: 2  SSGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                 GE+  +C    CGK F    N   H RIHTG++P   
Sbjct: 2  SSGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G R H C++CGK F+++S   +H+ +HTGEKP   +
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +      G+R + C    C K F Q++N   H   H
Sbjct: 2  SSGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +G+KP++C  + C K F    +L  H R+HTG+R    
Sbjct: 2  SSGSSGSGKKPYEC--KECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
              +  G + + C EC K F++   L +H+ VHTGE+    
Sbjct: 2  SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     +G +PY C    C K F Q  +L  H   H
Sbjct: 2  SSGSSGSGKKPYEC--KECRKTFIQIGHLNQHKRVH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGEKP++C    CGK F+ + +L  H R+HTG +P   
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +  G + + C ECGK F ++S L RH+ VHTG KP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG++PY C  + C K F Q+++L  H   H
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVH 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 71
                GEKP++C    CGK FS   +L  H+R+HTG  P 
Sbjct: 2  SSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 41
             +  G + + C +CGKAF +   L  H  VHTG  P 
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
                G++PY C  D C K F+Q  +L  HI  H
Sbjct: 2  SSGSSGGEKPYRC--DQCGKAFSQKGSLIVHIRVH 34

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
                +  K  QC    CG+ F+L  +L  H RIHTG++P   
Sbjct: 2  SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
              +    + H C ECG+ F   S L +HQ +HTGEKP   +
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               TGE P++C    CGK FS    L +H + H+G      
Sbjct: 3  SGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
              +  G   + C ECGK F    +L  HQ  H+G+     
Sbjct: 2  SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +     TG+ PY C    C K F++   L SH  TH
Sbjct: 2  SSGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTH 35

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 57.6 bits (140), Expect = 1e-11
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCP 74
               TG+KP++C    CGK F  + +L  H R  HTG++P    
Sbjct: 3  SGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCT 44
             +  G + + C ECGKAF++++ L RH    HTGEKP   +
Sbjct: 3  SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 91
          +     TG +PY C    C K F Q+T+L  H
Sbjct: 2  SSGSSGTGKKPYEC--IECGKAFIQNTSLIRH 31

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
            +GEKPF C+   C K FS    L  H + H  ++P   
Sbjct: 4  GSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
           + G +   C+ C KAF   S L  HQ  H  EKP   +
Sbjct: 5  SS-GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 57.8 bits (139), Expect = 2e-11
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 13 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
          ++C ECG    + S LK+H   HT  +P+ C    C   F    NL  H++     +
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 50.1 bits (119), Expect = 1e-08
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 48 CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
          CG R      L+ H+R HT  RPY C    CN  F    NL  H+ + A +K
Sbjct: 7  CGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.7 bits (92), Expect = 5e-05
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 1  MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 39
          ++KH+ TH   R + C  C  +F     L +H       K
Sbjct: 17 LKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 32 QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
              +GE P++C+   CGK F+    L +H R H G+     
Sbjct: 2  SSGSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
           + G   + C+ECGKAF    +L  HQ  H GE     
Sbjct: 5  SS-GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
             +G+ PY C    C K F +   L SH  TH
Sbjct: 3  SGSSGENPYEC--SECGKAFNRKDQLISHQRTH 33

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.7 bits (135), Expect = 7e-11
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               +GEK   C  + CGK F     LR H R+H G++    
Sbjct: 3  SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44
             +  G + H C ECGK F   S L+ HQ VH GEK    +
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
               +G++ + C  D C K F   + L+ H   H
Sbjct: 3  SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVH 35

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 54.9 bits (132), Expect = 1e-10
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 9  GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
            +   C  CGK F +   L RH+L H+GEKP+  
Sbjct: 9  TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
              K   C    CGK F   ++L  H   H+G++PY  
Sbjct: 7  GRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 71
           +G++ ++C    CGK F    +L  H RIHTG  P 
Sbjct: 5  SSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 50.3 bits (121), Expect = 6e-09
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPF 41
          C ECGK+F +   L  H+ +HTG  P 
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSGPS 39

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.0 bits (128), Expect = 6e-10
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
               T  K + C    CGK F+  F+L  H +IHT       
Sbjct: 3  SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
              +    + + C ECGKAF     L RHQ +HT +     
Sbjct: 2  SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
               T  + Y C  + C K F +  +L  H   H
Sbjct: 3  SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIH 35

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 52.7 bits (127), Expect = 7e-10
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 71
                GE P+ C    CGK F+   +L  H R  +   P 
Sbjct: 2  SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 13 HVCAECGKAFVESSKLKRHQLVHTGEKPF 41
          ++C +CGK+F +   L  HQ   +   P 
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 52.2 bits (125), Expect = 1e-09
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
          +K F+C F GC K F   +N+R+H++ H  DR
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 44.9 bits (106), Expect = 5e-07
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 68 DRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          D+ + C F GC K F +  N++SHI TH
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 50.3 bits (121), Expect = 5e-09
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
          +PF CT+  CGKRF+    L+ H R HTG++
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
          RP++C +  C K+F +S  L+ H  TH   K
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 11 RVHVC--AECGKAFVESSKLKRHQLVHTGEK 39
          R  +C  + CGK F  S +L+RH+  HTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 50.4 bits (120), Expect = 1e-08
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 11/75 (14%)

Query: 25 SSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ 84
          S    + Q +H G++  +C+   CG  F             +  +  +C  + C K   Q
Sbjct: 3  SGSSGKRQKIHLGDRSQKCS--KCGIIF-------IRRSTLSRRKTPMC--EKCRKDSCQ 51

Query: 85 STNLKSHILTHAKAK 99
             L       +  K
Sbjct: 52 EAALNKDEGNESGKK 66

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 49.3 bits (117), Expect = 3e-08
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 10/72 (13%)

Query: 1  MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 59
            K    H G R   C++CG  F+  S         +  K   C  E C K    +  L 
Sbjct: 6  SGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMC--EKCRKDSCQEAALN 56

Query: 60 THVRIHTGDRPY 71
                +G +  
Sbjct: 57 KDEGNESGKKTS 68

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.3 bits (122), Expect = 1e-08
 Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 6/100 (6%)

Query: 24  ESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA 83
             S  K +  + TG   F+C    C   +     L  H+   TG           N    
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKR 59

Query: 84  QSTNLKSHILTHAKAKLLKGLFSLKMCPH---ILDEMKRH 120
            S   K  +L     +  + +     C H    L ++  H
Sbjct: 60  WSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.0 bits (116), Expect = 8e-08
 Identities = 15/105 (14%), Positives = 28/105 (26%), Gaps = 8/105 (7%)

Query: 3   KHLHTHGPRVHVCAECGKAFVESSKLKRHQLV--HTGEKPFQCTFEG-CGKRFSLDFNLR 59
             + T G     C +C  A+    +L  H     H  +   +               +L 
Sbjct: 11  GSIFT-GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 60  THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL--THAKAKLLK 102
                    +   C +  C   F    +L  H++   H +     
Sbjct: 70  EMEGKEDAQKVLKCMY--CGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.1 bits (115), Expect = 3e-08
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 73
           +GEKP+ C    C + FS +  L  H ++HT       
Sbjct: 5  SSGEKPYSCA--ECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.3 bits (113), Expect = 7e-08
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 43
           + G + + CAEC + F ++++L +HQ +HT +     
Sbjct: 5  SS-GEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 45.4 bits (108), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
            R  TG +P+ CP   C++ F++S +L  H   H
Sbjct: 2  STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 65
               TG KPFQC    C + FS   +L  H + H
Sbjct: 2  STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 44.3 bits (105), Expect = 6e-07
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 36 TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
            +K   C  +GCGK +    +LR H+R HTG+R
Sbjct: 4  GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 41.2 bits (97), Expect = 7e-06
 Identities = 7/27 (25%), Positives = 18/27 (66%)

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          + ++C   GC K + ++++L++H+  H
Sbjct: 7  KQHICHIQGCGKVYGKTSHLRAHLRWH 33

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 11 RVHVC--AECGKAFVESSKLKRHQLVHTGEK 39
          + H+C    CGK + ++S L+ H   HTGE+
Sbjct: 7  KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.5 bits (105), Expect = 7e-07
 Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 70
                 GE PF+C+   C + F+    L  H R H     
Sbjct: 2  SSGSSGAGENPFKCS--KCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 6/26 (23%), Positives = 14/26 (53%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKP 40
          C++C + F + + L +H+  H  +  
Sbjct: 15 CSKCDRVFTQRNYLVQHERTHARKSG 40

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 3e-06
 Identities = 37/194 (19%), Positives = 67/194 (34%), Gaps = 41/194 (21%)

Query: 26  SKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR----IHTG--DRPYVCPFDGCN 79
           +KL ++ LV    K    +        S+   L+  +     +H    D  Y  P    +
Sbjct: 409 NKLHKYSLVEKQPKESTISI------PSIYLELKVKLENEYALHRSIVDH-YNIPKTFDS 461

Query: 80  KKFAQSTN---LKSHILTHAKAKLLKGLFSLKMCPHI-LD----EMK-RHDGGYEETLHI 130
                        SHI  H K        +L     + LD    E K RHD       + 
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTL--FRMVFLDFRFLEQKIRHDS---TAWNA 516

Query: 131 PSDHVNTV-----YLEETQVLDDHDNSKKYIQ--QKFIKKEEPECQITTHHNMVQI---D 180
               +NT+     Y  +  + D+    ++ +     F+ K E     + + ++++I    
Sbjct: 517 SGSILNTLQQLKFY--KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574

Query: 181 KSSRKWEQ--KQVQ 192
           +    +E+  KQVQ
Sbjct: 575 EDEAIFEEAHKQVQ 588

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.2 bits (103), Expect = 5e-06
 Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 1   MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 60
           + + L +      VC  C   F  S  LK+H      E    C    C K F+   +   
Sbjct: 63  LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALD 118

Query: 61  HVR 63
           HV 
Sbjct: 119 HVC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 19/106 (17%), Positives = 30/106 (28%), Gaps = 13/106 (12%)

Query: 18  CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF--NLRTHVRIHTGDRPYVCPF 75
                      + HQL    ++  +   +       L    +    +        +VCP 
Sbjct: 20  IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 76  DGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEMKRHD 121
             C   F+ S +LK HI               K+CP    E    D
Sbjct: 80  --CLMPFSSSVSLKQHIRYTEHT---------KVCPVCKKEFTSTD 114

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 38.8 bits (91), Expect = 5e-05
 Identities = 14/29 (48%), Positives = 15/29 (51%)

Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEK 39
          R  VC  C +AF     LKRH   HT EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.7 bits (94), Expect = 6e-05
 Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 7/92 (7%)

Query: 3  KHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV 62
                   V+ C  C        +   H+ +        C +  C  RF      + H 
Sbjct: 7  GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPY--CSLRFFSPELKQEH- 61

Query: 63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 94
                +   C    C + F  S ++  H + 
Sbjct: 62 ESKCEYKKLTCLE--CMRTFKSSFSIWRHQVE 91

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 38.1 bits (88), Expect = 9e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 68 DRPYVCPFDGCNKKFAQSTNLKSHILTHAK 97
          DRPY C   GC+K F ++ +L  H  +H +
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 35.5 bits (81), Expect = 9e-04
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEK 39
          + +VC  C + F +   L+RH  +HTGEK
Sbjct: 2  KPYVCIHCQRQFADPGALQRHVRIHTGEK 30

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	318
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.81
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.8
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.78
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.77
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.77
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.76
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.76
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.75
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.75
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.74
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.74
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.74
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.74
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.73
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.68
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.65
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.61
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.58
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.57
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.56
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.55
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.54
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.48
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.45
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.44
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.44
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.41
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.41
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.39
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.38
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.37
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.37
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.36
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.36
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.36
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.36
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.36
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.34
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.34
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.34
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.34
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.34
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.33
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.31
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.3
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.29
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.29
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.28
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.27
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.26
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.26
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.26
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.25
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.21
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.2
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.2
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.19
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.18
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.16
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.11
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.1
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.09
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.02
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.01
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.01
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.0
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.98
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.96
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.95
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.94
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.94
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.93
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.93
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.92
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.92
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.9
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.9
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.9
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.9
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.9
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.89
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.88
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.86
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.85
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.85
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.85
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.84
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.84
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.84
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.82
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.82
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.81
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.8
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.79
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.78
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.76
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.75
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.74
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.73
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.73
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.73
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.72
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.71
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.7
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.68
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.68
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.67
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.67
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.67
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.66
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.66
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.65
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.65
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.63
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.57
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.57
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.47
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.4
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.36
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.3
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.28
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.28
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.27
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.26
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.26
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.25
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.24
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.22
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.22
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.18
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.11
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.08
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.01
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.97
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.95
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.92
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.88
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.88
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.87
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.86
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.84
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.83
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.81
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.8
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.79
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.79
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.78
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.77
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.75
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.74
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.74
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.92
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.91
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.7
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.7
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.67
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.66
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.63
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.63
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.62
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.61
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.6
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.58
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.73
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.57
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.56
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.55
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.53
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.52
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.5
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.46
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.42
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.54
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.53
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.33
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.25
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.23
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.25
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.14
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.79
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	93.25
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	91.47
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	89.45
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	88.69
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	88.54
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	81.34

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=6.1e-24  Score=177.14  Aligned_cols=115  Identities=27%  Similarity=0.439  Sum_probs=104.5

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCccc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF   82 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F   82 (318)
                      |.++| |+++|+|++|++.|.+...|..|+++|++++||.|..  |++.|.....|..|+++|+++++|.|++  |++.|
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F   88 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSF   88 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEE
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCC--CCCCc
Confidence            44567 9999999999999999999999999999999999988  9999999999999999999999999977  99999


Q ss_pred             CChhHHHHHHHHhcccccccc--cccCCCchhHHHhhhhccC
Q psy16882         83 AQSTNLKSHILTHAKAKLLKG--LFSLKMCPHILDEMKRHDG  122 (318)
Q Consensus        83 ~~~~~L~~H~r~H~~~k~~~c--~~~C~~C~~~~~~~~~h~~  122 (318)
                      .+...|..|+++|++++++.+  .+.|..|+.++.+...|.+
T Consensus        89 ~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~h~~  130 (133)
T 2lt7_A           89 INYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYLS  130 (133)
T ss_dssp             SSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCHHHH
T ss_pred             CCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcccccc
Confidence            999999999999999888765  4789999988876665543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.81  E-value=2.1e-20  Score=150.80  Aligned_cols=112  Identities=29%  Similarity=0.652  Sum_probs=91.8

Q ss_pred             CCCcccCC--ccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChh
Q psy16882          9 GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST   86 (318)
Q Consensus         9 g~k~f~C~--~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~   86 (318)
                      ++++|.|+  .|++.|.+...|..|+++| +.++|.|..  |++.|.+...|..|+++|+++++|.|+++.|++.|.+..
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHH
Confidence            35789999  8999999999999999999 788999988  999999999999999999999999997556999999999


Q ss_pred             HHHHHHHHhcccccccccc-cCCCc----hhHHHhhhhccCC
Q psy16882         87 NLKSHILTHAKAKLLKGLF-SLKMC----PHILDEMKRHDGG  123 (318)
Q Consensus        87 ~L~~H~r~H~~~k~~~c~~-~C~~C----~~~~~~~~~h~~~  123 (318)
                      .|..|+++|+++++|.|.+ .|..-    ..+..|++.|.+.
T Consensus        79 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             HHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             HHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            9999999999999887764 34322    2345566666543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.80  E-value=2.7e-20  Score=161.37  Aligned_cols=135  Identities=38%  Similarity=0.679  Sum_probs=93.7

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN   79 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~   79 (318)
                      |..|+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|++.|.++++|.|++  |+
T Consensus        37 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~  112 (190)
T 2i13_A           37 LAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPE--CG  112 (190)
T ss_dssp             HHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECTT--TC
T ss_pred             HHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCCC--CC
Confidence            45677777 7788888888888888888888888888888888877  8888888888888888888888888866  88


Q ss_pred             cccCChhHHHHHHHHhcccccccccccCCCc---hhHHHhhhhccCCCcccccCCCCCCCcceeccc
Q psy16882         80 KKFAQSTNLKSHILTHAKAKLLKGLFSLKMC---PHILDEMKRHDGGYEETLHIPSDHVNTVYLEET  143 (318)
Q Consensus        80 k~F~~~~~L~~H~r~H~~~k~~~c~~~C~~C---~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~e~~  143 (318)
                      +.|.+...|..|+++|+++++|.|..+-..+   ..+..|++.|.+..    .+.+..+...|....
T Consensus       113 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~----~~~C~~C~~~f~~~~  175 (190)
T 2i13_A          113 KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK----PYKCPECGKSFSRRD  175 (190)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC----CEECTTTCCEESSHH
T ss_pred             CccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC----CeECCCCCCccCCHH
Confidence            8888888888888888877766544311111   13344555554432    344555666554433

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.78  E-value=4e-20  Score=160.29  Aligned_cols=137  Identities=35%  Similarity=0.609  Sum_probs=84.9

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN   79 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~   79 (318)
                      |..|+++| ++++|.|+.|++.|.+...|..|++.|.++++|.|..  |++.|.....|..|++.|.++++|.|++  |+
T Consensus         9 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~   84 (190)
T 2i13_A            9 SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPE--CG   84 (190)
T ss_dssp             ----------------------CCSSHHHHHGGGCC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTT--TC
T ss_pred             chhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCcc--cC
Confidence            45677788 8889999999999999999999999999999999987  9999999999999999999999999976  99


Q ss_pred             cccCChhHHHHHHHHhcccccccccccCCCc---hhHHHhhhhccCCCcccccCCCCCCCcceeccccc
Q psy16882         80 KKFAQSTNLKSHILTHAKAKLLKGLFSLKMC---PHILDEMKRHDGGYEETLHIPSDHVNTVYLEETQV  145 (318)
Q Consensus        80 k~F~~~~~L~~H~r~H~~~k~~~c~~~C~~C---~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~e~~~~  145 (318)
                      +.|.+...|..|+++|+++++|.|..+-..+   ..+..|++.|.+.    ..+.+..++..|.....+
T Consensus        85 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~L  149 (190)
T 2i13_A           85 KSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE----KPYKCPECGKSFSREDNL  149 (190)
T ss_dssp             CEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCC----CCEECTTTCCEESCHHHH
T ss_pred             CccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCC----CCeECCCCCcccCCHHHH
Confidence            9999999999999999888876544322211   1344466655443    234556677766554433

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.77  E-value=2.1e-19  Score=150.67  Aligned_cols=112  Identities=33%  Similarity=0.557  Sum_probs=91.5

Q ss_pred             CCCcccCCccCcccccchhhhhhhhh-hcCCCc--------eecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLV-HTGEKP--------FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN   79 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~-H~~~kp--------y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~   79 (318)
                      ...+|.|..|++.|.+...|..|++. |.+..+        |.|..  |++.|.....|..|+++|+++++|.|.+..|+
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence            56789999999999999999999987 776654        78987  99999999999999999999999999654599


Q ss_pred             cccCChhHHHHHHHHhcccccccccc-cCCCchhHHHhhhhccC
Q psy16882         80 KKFAQSTNLKSHILTHAKAKLLKGLF-SLKMCPHILDEMKRHDG  122 (318)
Q Consensus        80 k~F~~~~~L~~H~r~H~~~k~~~c~~-~C~~C~~~~~~~~~h~~  122 (318)
                      +.|.+...|..|+++|+++++|.|.+ .|.........+..|..
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            99999999999999999999887765 34433333334445444

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.77  E-value=5.3e-19  Score=153.17  Aligned_cols=103  Identities=36%  Similarity=0.692  Sum_probs=89.2

Q ss_pred             Chhchhhh-CCCcccC--CccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhh-hhc-CCCCceec--
Q psy16882          1 MRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIH-TGDRPYVC--   73 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C--~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~-r~H-~gekpf~C--   73 (318)
                      |+.|+++| ++++|.|  ..|++.|.+...|..|+++|.++++|.|..+.|++.|.+...|..|+ +.| .++++|.|  
T Consensus        30 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  109 (190)
T 1tf6_A           30 LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHF  109 (190)
T ss_dssp             HHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECS
T ss_pred             HHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCC
Confidence            56788888 8899999  88999999999999999999999999998334999999999999998 667 46789999  


Q ss_pred             cCCCCCcccCChhHHHHHHHHhcccccccccc
Q psy16882         74 PFDGCNKKFAQSTNLKSHILTHAKAKLLKGLF  105 (318)
Q Consensus        74 ~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~  105 (318)
                      ++  |++.|.+...|..|+++|+++++|.|..
T Consensus       110 ~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~  139 (190)
T 1tf6_A          110 EN--CGKAFKKHNQLKVHQFSHTQQLPYECPH  139 (190)
T ss_dssp             SS--SCEECSSHHHHHHHHGGGSSSCSSBCCS
T ss_pred             CC--CccccCCHHHHHHHHHHhCCCCCccCCC
Confidence            66  9999999999999999999988776653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=5e-19  Score=147.90  Aligned_cols=104  Identities=38%  Similarity=0.684  Sum_probs=81.2

Q ss_pred             Chhchh---hh-CCCcccCCcc-----CcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCce
Q psy16882          1 MRKHLH---TH-GPRVHVCAEC-----GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY   71 (318)
Q Consensus         1 Lr~Hlr---tH-g~k~f~C~~C-----gk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf   71 (318)
                      |+.|++   +| ++++|.|.+|     ++.|.+...|..|+++|.++++|.|.+++|++.|.+...|..|+++|+++++|
T Consensus        19 L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   98 (155)
T 2gli_A           19 LVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY   98 (155)
T ss_dssp             HHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCE
T ss_pred             HHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCe
Confidence            466776   56 6778887653     38888888888888888888888887545888888888888888888888888


Q ss_pred             eccCCCCCcccCChhHHHHHH-HHhccccccccc
Q psy16882         72 VCPFDGCNKKFAQSTNLKSHI-LTHAKAKLLKGL  104 (318)
Q Consensus        72 ~C~~~~C~k~F~~~~~L~~H~-r~H~~~k~~~c~  104 (318)
                      .|++.+|++.|.+...|..|+ ++|.++++|.|.
T Consensus        99 ~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  132 (155)
T 2gli_A           99 MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK  132 (155)
T ss_dssp             ECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC
T ss_pred             eCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            885445888888888888887 778887766544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.76  E-value=5.2e-19  Score=141.19  Aligned_cols=94  Identities=41%  Similarity=0.775  Sum_probs=87.9

Q ss_pred             CCCcccCCc--cCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChh
Q psy16882          9 GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST   86 (318)
Q Consensus         9 g~k~f~C~~--Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~   86 (318)
                      ++++|.|.+  |++.|.+...|..|+++|.++++|.|.+..|++.|.....|..|+++|+++++|.|.+  |++.|.+..
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~   80 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRSD   80 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCCHH
Confidence            678999997  9999999999999999999999999984459999999999999999999999999977  999999999


Q ss_pred             HHHHHHHHhccccccccc
Q psy16882         87 NLKSHILTHAKAKLLKGL  104 (318)
Q Consensus        87 ~L~~H~r~H~~~k~~~c~  104 (318)
                      .|..|+++|+++++|.|.
T Consensus        81 ~l~~H~~~h~~~~~~~C~   98 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCR   98 (119)
T ss_dssp             HHHHHHHHHHTCCCEECC
T ss_pred             HHHHHHHHhcCCCCeeCC
Confidence            999999999999987763

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.75  E-value=6.2e-19  Score=140.73  Aligned_cols=96  Identities=16%  Similarity=0.246  Sum_probs=88.0

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhh--hcCCCcee-cccCCCCCcc--cchhhhhhhhhhcCCCCceecc
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV--HTGEKPFQ-CTFEGCGKRF--SLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~--H~~~kpy~-C~~~~Cgk~F--~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+.|+++| ++++|.|.+|++.|.+...|..|+++  |.+.+++. |..  |++.|  .....|..|+++|+++++|.|.
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcceECC
Confidence            68899999 99999999999999999999999998  77777654 987  99998  8999999999999999999997


Q ss_pred             CCCCCcccCChhHHHHHHHHhccccc
Q psy16882         75 FDGCNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        75 ~~~C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      +  |++.|.+...|..|+++|+....
T Consensus        85 ~--C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           85 Y--CGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             S--SCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             C--CCCccCCHHHHHHHHHHhCCccc
Confidence            7  99999999999999999876553

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=2.5e-18  Score=135.04  Aligned_cols=91  Identities=33%  Similarity=0.652  Sum_probs=86.9

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL   88 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L   88 (318)
                      .+++|.|.+|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|+++++|.|.+  |++.|.+...|
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L   89 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQSRTL   89 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCHHHH
Confidence            6789999999999999999999999999999999998  9999999999999999999999999977  99999999999


Q ss_pred             HHHHHHhcccccccc
Q psy16882         89 KSHILTHAKAKLLKG  103 (318)
Q Consensus        89 ~~H~r~H~~~k~~~c  103 (318)
                      ..|+++|+++++|.+
T Consensus        90 ~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           90 AVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHTTSCCCCCC
T ss_pred             HHHHHHhCCCCCCcC
Confidence            999999999988753

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.75  E-value=7.8e-19  Score=140.15  Aligned_cols=91  Identities=46%  Similarity=0.887  Sum_probs=86.9

Q ss_pred             Chhchhhh-CCCcccCC--ccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec--cC
Q psy16882          1 MRKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC--PF   75 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~--~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C--~~   75 (318)
                      |..|+++| ++++|.|.  .|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|+++|+++++|.|  ++
T Consensus        24 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~  101 (119)
T 2jp9_A           24 LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRSDHLKTHTRTHTGEKPFSCRWPS  101 (119)
T ss_dssp             HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECCSTT
T ss_pred             HHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCCHHHHHHHHHHhcCCCCeeCCCCC
Confidence            57899999 99999999  79999999999999999999999999988  99999999999999999999999999  66


Q ss_pred             CCCCcccCChhHHHHHHHHh
Q psy16882         76 DGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        76 ~~C~k~F~~~~~L~~H~r~H   95 (318)
                        |++.|.+...|..|+++|
T Consensus       102 --C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A          102 --CQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             --CCCEESSHHHHHHHHHTC
T ss_pred             --CccccCCHHHHHHHHhcC
Confidence              999999999999999886

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.74  E-value=2.9e-18  Score=138.19  Aligned_cols=101  Identities=98%  Similarity=1.561  Sum_probs=90.6

Q ss_pred             ChhchhhhCCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCc
Q psy16882          1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK   80 (318)
Q Consensus         1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k   80 (318)
                      |+.|+++|+.++|.|..|++.|.+...|..|+++|.++++|.|.++.|++.|.....|..|+++|+++++|.|++..|++
T Consensus        23 l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  102 (124)
T 1ubd_C           23 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK  102 (124)
T ss_dssp             HHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCC
T ss_pred             HHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCC
Confidence            57899999999999999999999999999999999999999998556999999999999999999999999996445999


Q ss_pred             ccCChhHHHHHHHHhcccccc
Q psy16882         81 KFAQSTNLKSHILTHAKAKLL  101 (318)
Q Consensus        81 ~F~~~~~L~~H~r~H~~~k~~  101 (318)
                      .|.+...|..|+++|++++++
T Consensus       103 ~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C          103 KFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCSSTTTTHHHHHHHC-----
T ss_pred             ccCCHHHHHHHHHHHcccccC
Confidence            999999999999999998764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.74  E-value=2.4e-18  Score=149.03  Aligned_cols=95  Identities=34%  Similarity=0.671  Sum_probs=87.6

Q ss_pred             Chhchhhh-CCCcccCC--ccCcccccchhhhhhh-hhh-cCCCceec--ccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882          1 MRKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQ-LVH-TGEKPFQC--TFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~--~Cgk~F~~~~~L~~H~-~~H-~~~kpy~C--~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+.|+++| ++++|.|.  .|++.|.+...|..|+ +.| .+.++|.|  ..  |++.|.+...|..|+++|+++++|.|
T Consensus        60 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~~~~~C  137 (190)
T 1tf6_A           60 LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFEN--CGKAFKKHNQLKVHQFSHTQQLPYEC  137 (190)
T ss_dssp             HHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSS--SCEECSSHHHHHHHHGGGSSSCSSBC
T ss_pred             HHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCC--CccccCCHHHHHHHHHHhCCCCCccC
Confidence            57899999 89999999  8999999999999999 677 46789999  66  99999999999999999999999999


Q ss_pred             cCCCCCcccCChhHHHHHHHHhcc
Q psy16882         74 PFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        74 ~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ++..|++.|.+...|..|+++|++
T Consensus       138 ~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          138 PHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             CSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CCCCCCchhcCHHHHHHHHHHhCC
Confidence            544499999999999999999988

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.9e-18  Score=132.09  Aligned_cols=89  Identities=34%  Similarity=0.655  Sum_probs=85.0

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL   88 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L   88 (318)
                      ++++|.|.+|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|+++|+++++|.|++  |++.|.+...|
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   80 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQL   80 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHH
Confidence            6789999999999999999999999999999999988  9999999999999999999999999987  99999999999


Q ss_pred             HHHHHHhcccccc
Q psy16882         89 KSHILTHAKAKLL  101 (318)
Q Consensus        89 ~~H~r~H~~~k~~  101 (318)
                      ..|+++|++++..
T Consensus        81 ~~H~~~h~~~~~p   93 (96)
T 2dmd_A           81 TVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHTTCCSCCCC
T ss_pred             HHHHHHhcCCCCC
Confidence            9999999987653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=5.6e-18  Score=135.89  Aligned_cols=93  Identities=31%  Similarity=0.585  Sum_probs=86.2

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhh---cCCCCceeccCCCCCcccCCh
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI---HTGDRPYVCPFDGCNKKFAQS   85 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~---H~gekpf~C~~~~C~k~F~~~   85 (318)
                      ++++|.|++|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|++.   |.++++|.|++  |++.|.+.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~   79 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRR   79 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESSH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCCH
Confidence            6789999999999999999999999999999999998  99999999999999985   57889999987  99999999


Q ss_pred             hHHHHHHHHhcccccccccc
Q psy16882         86 TNLKSHILTHAKAKLLKGLF  105 (318)
Q Consensus        86 ~~L~~H~r~H~~~k~~~c~~  105 (318)
                      ..|..|+++|+++++|.|..
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~   99 (124)
T 2dlq_A           80 MELRLHMVSHTGEMPYKCSS   99 (124)
T ss_dssp             HHHHHHHHHHSSSCSEECSS
T ss_pred             HHHHHHHHHcCCCCCccCCC
Confidence            99999999999998776543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=3.1e-18  Score=143.03  Aligned_cols=97  Identities=37%  Similarity=0.796  Sum_probs=90.1

Q ss_pred             Chhchhhh-CCCcccCCc--cCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhh-hhcCCCCceeccCC
Q psy16882          1 MRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFD   76 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~--Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~-r~H~gekpf~C~~~   76 (318)
                      |+.|+++| ++++|.|.+  |++.|.+...|..|+++|+++++|.|.+++|++.|.+...|..|+ +.|.++++|.|+++
T Consensus        55 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~  134 (155)
T 2gli_A           55 LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLP  134 (155)
T ss_dssp             HHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCST
T ss_pred             HHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCC
Confidence            57899999 999999986  999999999999999999999999998666999999999999999 89999999999654


Q ss_pred             CCCcccCChhHHHHHHHHhcc
Q psy16882         77 GCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        77 ~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      +|++.|.+...|..|+++|++
T Consensus       135 ~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          135 GCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCCEESSHHHHHHHHHHSCC
T ss_pred             CCccccCCHHHHHHHHHhhcC
Confidence            599999999999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=2.9e-18  Score=130.40  Aligned_cols=87  Identities=43%  Similarity=0.850  Sum_probs=80.5

Q ss_pred             CCCcccCC--ccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChh
Q psy16882          9 GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST   86 (318)
Q Consensus         9 g~k~f~C~--~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~   86 (318)
                      |+++|.|+  .|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|+++|+++++|.|++  |++.|.+..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~   76 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSD   76 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCHH
Confidence            57899998  59999999999999999999999999998  9999999999999999999999999977  999999999


Q ss_pred             HHHHHHHHhcccc
Q psy16882         87 NLKSHILTHAKAK   99 (318)
Q Consensus        87 ~L~~H~r~H~~~k   99 (318)
                      .|..|+++|++++
T Consensus        77 ~l~~H~~~H~~~k   89 (90)
T 1a1h_A           77 ERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHGGGGC--
T ss_pred             HHHHHHHHhcccC
Confidence            9999999999865

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=4.7e-18  Score=136.31  Aligned_cols=94  Identities=32%  Similarity=0.752  Sum_probs=86.9

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhh---hcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV---HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD   76 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~---H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~   76 (318)
                      |+.|+++| ++++|.|+.|++.|.+...|..|+..   |.++++|.|.+  |++.|.....|..|+++|+++++|.|++ 
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~-   99 (124)
T 2dlq_A           23 LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRMELRLHMVSHTGEMPYKCSS-   99 (124)
T ss_dssp             HHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHSSSCSEECSS-
T ss_pred             HHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCccCCC-
Confidence            57899999 89999999999999999999999985   57889999998  9999999999999999999999999977 


Q ss_pred             CCCcccCChhHHHHHHHH-hccc
Q psy16882         77 GCNKKFAQSTNLKSHILT-HAKA   98 (318)
Q Consensus        77 ~C~k~F~~~~~L~~H~r~-H~~~   98 (318)
                       |++.|.+...|..|++. |.++
T Consensus       100 -C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A          100 -CSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             -SCCEESSHHHHHHHHHHTSSCS
T ss_pred             -ccchhCCHHHHHHHHHHHCCCC
Confidence             99999999999999975 6554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=3.9e-18  Score=134.66  Aligned_cols=94  Identities=16%  Similarity=0.279  Sum_probs=87.3

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK   81 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~   81 (318)
                      .++++| ++++|.|.+|++.|.....|..|+++|.  ++|.|.+  |++.|.....|..|++ |+++++|.|.+  |++.
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~   78 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLE--CMRT   78 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEE
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCcc--ccch
Confidence            467888 8999999999999999999999999994  7899998  9999999999999996 99999999987  9999


Q ss_pred             cCChhHHHHHHH-Hhcccccccc
Q psy16882         82 FAQSTNLKSHIL-THAKAKLLKG  103 (318)
Q Consensus        82 F~~~~~L~~H~r-~H~~~k~~~c  103 (318)
                      |.+...|..|++ +|.++++|.+
T Consensus        79 f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             hCCHHHHHHHHHHHcCCCCCCCC
Confidence            999999999997 8998888764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=6.5e-18  Score=126.05  Aligned_cols=82  Identities=41%  Similarity=0.873  Sum_probs=78.6

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHH
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH   91 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H   91 (318)
                      ||.|..|++.|.....|..|+++|.++++|.|..  |++.|.....|..|++.|+++++|.|++  |++.|.+...|..|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H   76 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITH   76 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHH
Confidence            6899999999999999999999999999999998  9999999999999999999999999977  99999999999999


Q ss_pred             HHHhcc
Q psy16882         92 ILTHAK   97 (318)
Q Consensus        92 ~r~H~~   97 (318)
                      +++|++
T Consensus        77 ~~~H~g   82 (82)
T 2kmk_A           77 SRKHTG   82 (82)
T ss_dssp             HHHHC-
T ss_pred             HHhhCC
Confidence            999974

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.71  E-value=2.4e-17  Score=138.04  Aligned_cols=104  Identities=42%  Similarity=0.808  Sum_probs=94.4

Q ss_pred             Chhchhh-h-CCCc--------ccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCc
Q psy16882          1 MRKHLHT-H-GPRV--------HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP   70 (318)
Q Consensus         1 Lr~Hlrt-H-g~k~--------f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekp   70 (318)
                      |+.|+++ | +..+        |.|..|++.|.+...|..|+++|+++++|.|.+++|++.|.....|..|+++|+++++
T Consensus        41 L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~  120 (155)
T 2rpc_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP  120 (155)
T ss_dssp             HHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS
T ss_pred             HHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            5789887 7 4443        8999999999999999999999999999999866799999999999999999999999


Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhccccccccc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGL  104 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~  104 (318)
                      |.|.+.+|++.|.+...|..|+++|+++++|.|.
T Consensus       121 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          121 FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             BCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9997446999999999999999999999988763

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.9e-17  Score=130.93  Aligned_cols=87  Identities=36%  Similarity=0.840  Sum_probs=82.9

Q ss_pred             hh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCCh
Q psy16882          7 TH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS   85 (318)
Q Consensus         7 tH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~   85 (318)
                      .| ++++|.| .|++.|.+...|..|++.|.++++|.|..  |++.|.....|..|+++|+++++|.|++  |++.|.+.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~   78 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWR   78 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSS--SCCEESCH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCC--CcchhcCH
Confidence            56 8899999 99999999999999999999999999998  9999999999999999999999999977  99999999


Q ss_pred             hHHHHHHHHhccc
Q psy16882         86 TNLKSHILTHAKA   98 (318)
Q Consensus        86 ~~L~~H~r~H~~~   98 (318)
                      ..|..|+++|+..
T Consensus        79 ~~l~~H~~~~~~~   91 (110)
T 2csh_A           79 DSFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccc
Confidence            9999999998753

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.8e-17  Score=125.52  Aligned_cols=86  Identities=41%  Similarity=0.868  Sum_probs=81.0

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCC--CceeccCCCCCcccCChh
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD--RPYVCPFDGCNKKFAQST   86 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge--kpf~C~~~~C~k~F~~~~   86 (318)
                      ++++|.|.+|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|++.|+++  ++|.|.+  |++.|.+..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f~~~~   79 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGFSRPD   79 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCCBSSHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCC--ccchhCCHH
Confidence            6789999999999999999999999999999999998  999999999999999999987  9999977  999999999


Q ss_pred             HHHHHHH-Hhccc
Q psy16882         87 NLKSHIL-THAKA   98 (318)
Q Consensus        87 ~L~~H~r-~H~~~   98 (318)
                      .|..|++ +|.++
T Consensus        80 ~L~~H~~~~H~~~   92 (95)
T 2yt9_A           80 HLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHTSCCC
T ss_pred             HHHHHHHHhcCCC
Confidence            9999986 67654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.68  E-value=6.5e-17  Score=125.20  Aligned_cols=87  Identities=44%  Similarity=0.872  Sum_probs=81.5

Q ss_pred             CCCcccCCc--cCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChh
Q psy16882          9 GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST   86 (318)
Q Consensus         9 g~k~f~C~~--Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~   86 (318)
                      ..++|.|.+  |++.|.....|..|+++|.++++|.|.++.|++.|.....|..|+++|+++++|.|.+  |++.|.+..
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~   89 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRSD   89 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCBCSSHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCccCCHH
Confidence            467899997  9999999999999999999999999974459999999999999999999999999977  999999999


Q ss_pred             HHHHHHHHhcc
Q psy16882         87 NLKSHILTHAK   97 (318)
Q Consensus        87 ~L~~H~r~H~~   97 (318)
                      .|..|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999964

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.65  E-value=7.6e-17  Score=122.20  Aligned_cols=85  Identities=42%  Similarity=0.890  Sum_probs=79.8

Q ss_pred             CCcccCCc--cCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhH
Q psy16882         10 PRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN   87 (318)
Q Consensus        10 ~k~f~C~~--Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~   87 (318)
                      ..+|.|.+  |++.|.....|..|++.|.++++|.|.++.|++.|.....|..|+++|+++++|.|++  |++.|.+...
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~   80 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDH   80 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS--SSCEESSHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCcccCCHHH
Confidence            46899999  9999999999999999999999999974459999999999999999999999999977  9999999999


Q ss_pred             HHHHHHHhc
Q psy16882         88 LKSHILTHA   96 (318)
Q Consensus        88 L~~H~r~H~   96 (318)
                      |..|+++|.
T Consensus        81 l~~H~~~H~   89 (89)
T 2wbs_A           81 LALHMKRHF   89 (89)
T ss_dssp             HHHHGGGGC
T ss_pred             HHHHHHhhC
Confidence            999999883

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.61  E-value=3.2e-16  Score=130.22  Aligned_cols=81  Identities=26%  Similarity=0.504  Sum_probs=74.8

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCC------Cceec
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD------RPYVC   73 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge------kpf~C   73 (318)
                      |+.|+++| ++++|.|++|++.|.+...|..|+++|++++||.|..  |++.|.....|..|+++|+++      ++|.|
T Consensus        38 L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C  115 (133)
T 2lt7_A           38 LRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSFINYQFMSSHIKSVHSQDPSGDSKLYRL  115 (133)
T ss_dssp             HHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEESSHHHHHHHHHHHTCCCTTSSSCCEEE
T ss_pred             HHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCC--CCCCcCCHHHHHHHhHHhcCCCCCCCCCCeec
Confidence            67899999 9999999999999999999999999999999999988  999999999999999998876      45899


Q ss_pred             cCCCCCcccCCh
Q psy16882         74 PFDGCNKKFAQS   85 (318)
Q Consensus        74 ~~~~C~k~F~~~   85 (318)
                      .+  |++.|...
T Consensus       116 ~~--C~k~~~~~  125 (133)
T 2lt7_A          116 HP--CRSLQIRQ  125 (133)
T ss_dssp             CC--CCSSCCCC
T ss_pred             CC--CCchhhhc
Confidence            66  99988754

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.58  E-value=8.7e-16  Score=110.77  Aligned_cols=58  Identities=33%  Similarity=0.689  Sum_probs=40.4

Q ss_pred             CCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      ++||+|.+|++.|.+...|..|+++|++++||.|..  |+++|.....|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            567777777777777777777777777777777765  7777777777777777776653

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.57  E-value=2e-15  Score=112.97  Aligned_cols=82  Identities=40%  Similarity=0.752  Sum_probs=75.4

Q ss_pred             cccC--CccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCC-CCcccCChhHH
Q psy16882         12 VHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG-CNKKFAQSTNL   88 (318)
Q Consensus        12 ~f~C--~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~-C~k~F~~~~~L   88 (318)
                      ||.|  +.|++.|.+...|..|+++|.++++|.|..++|++.|.....|..|+++|++   |.|.+.. |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6899  8999999999999999999999999999766699999999999999999988   9994322 99999999999


Q ss_pred             HHHHHHhc
Q psy16882         89 KSHILTHA   96 (318)
Q Consensus        89 ~~H~r~H~   96 (318)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.5e-15  Score=112.96  Aligned_cols=78  Identities=22%  Similarity=0.327  Sum_probs=55.7

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCC----CceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE----KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~----kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |.+|+++| ++++|.|.+|++.|.+...|..|++.|+..    ++|.|..  |++.|.....|..|+++|++++++.|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            45677777 777777777777777777777777665544    5677766  7777777777777777777777777754


Q ss_pred             CCCCccc
Q psy16882         76 DGCNKKF   82 (318)
Q Consensus        76 ~~C~k~F   82 (318)
                        |+..|
T Consensus        81 --~~~~~   85 (86)
T 1x6h_A           81 --SGPSS   85 (86)
T ss_dssp             --CCCCC
T ss_pred             --CCCCC
Confidence              76654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.55  E-value=2.8e-16  Score=119.78  Aligned_cols=83  Identities=27%  Similarity=0.498  Sum_probs=77.5

Q ss_pred             CCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHH
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLK   89 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~   89 (318)
                      +++|.|.+|++.|.+...|..|+++|+++++|.|..  |++.|.....|..|++.|++ .+|.|..  |++.|.+...|.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~--C~~~f~~~~~L~   75 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDK--VEELLSKNYHLE   75 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHH--HHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHH--HHHHHHHHhhhH
Confidence            579999999999999999999999999999999988  99999999999999999885 7899976  999999999999


Q ss_pred             HHHHHhcc
Q psy16882         90 SHILTHAK   97 (318)
Q Consensus        90 ~H~r~H~~   97 (318)
                      .|++.+++
T Consensus        76 ~H~~~~h~   83 (88)
T 1llm_C           76 NEVARLKK   83 (88)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99987654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=4.5e-15  Score=110.16  Aligned_cols=73  Identities=30%  Similarity=0.700  Sum_probs=63.9

Q ss_pred             CCCcccCCc--cCcccccchhhhhhhh-hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccC
Q psy16882          9 GPRVHVCAE--CGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA   83 (318)
Q Consensus         9 g~k~f~C~~--Cgk~F~~~~~L~~H~~-~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~   83 (318)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|..++|++.|.....|..|+++|+++++|.|.+  |++.|.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~F~   79 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF--SGPSSG   79 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS--SSCCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC--CCCCCC
Confidence            577888887  9999999999999998 798899999976669999999999999999999999999976  999884

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=5.4e-15  Score=106.57  Aligned_cols=58  Identities=38%  Similarity=0.794  Sum_probs=54.9

Q ss_pred             CCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      |+||.|..  |++.|.....|..|+++|++++||.|.+  |++.|.+.+.|..|+++|++++
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            78999998  9999999999999999999999999976  9999999999999999999864

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=2.1e-14  Score=106.55  Aligned_cols=63  Identities=46%  Similarity=0.811  Sum_probs=37.6

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      ++++|.|.+|++.|.+...|..|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4555666666666666666666666665555666655  66666666666666666666555554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=2.3e-14  Score=111.85  Aligned_cols=80  Identities=16%  Similarity=0.248  Sum_probs=71.8

Q ss_pred             CcccccchhhhhhhhhhcCCCceecccCCCCCccc-chhhhhhhhhhcCC-CCceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         19 GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS-LDFNLRTHVRIHTG-DRPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        19 gk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~-~~~~L~~H~r~H~g-ekpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      ...+.....+..|+++|.++++|.|..  |++.|. ....|..|+++|++ +++|.|.+  |++.|.+...|..|+++|+
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHc
Confidence            345667788899999999999999987  999999 99999999999998 99999977  9999999999999999999


Q ss_pred             cccccc
Q psy16882         97 KAKLLK  102 (318)
Q Consensus        97 ~~k~~~  102 (318)
                      +++++.
T Consensus        79 ~~kp~~   84 (98)
T 2gqj_A           79 SAKPSD   84 (98)
T ss_dssp             CSCSSC
T ss_pred             CCCCCC
Confidence            888743

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.1e-13  Score=103.85  Aligned_cols=75  Identities=27%  Similarity=0.479  Sum_probs=68.0

Q ss_pred             hhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCC----CceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         27 KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD----RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        27 ~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge----kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      +|.+|+++|+++++|.|..  |++.|.....|..|++.|+..    ++|.|.+  |++.|.+...|..|+++|++++++.
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcc
Confidence            5788999999999999998  999999999999999887765    7899977  9999999999999999999998776


Q ss_pred             ccc
Q psy16882        103 GLF  105 (318)
Q Consensus       103 c~~  105 (318)
                      |..
T Consensus        78 ~~~   80 (86)
T 1x6h_A           78 GEN   80 (86)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.44  E-value=5e-14  Score=110.22  Aligned_cols=71  Identities=34%  Similarity=0.619  Sum_probs=67.6

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |..|+++| ++++|.|.+|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|+++|+++++|.+
T Consensus        33 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           33 LLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            57899999 8899999999999999999999999999999999998  99999999999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=2.4e-14  Score=111.81  Aligned_cols=71  Identities=20%  Similarity=0.327  Sum_probs=66.6

Q ss_pred             Chhchhhh-CCCcccCCccCcccc-cchhhhhhhhhhcC-CCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFV-ESSKLKRHQLVHTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~-~~~~L~~H~~~H~~-~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      +..|+++| ++++|.|.+|++.|. +...|..|+++|++ +++|.|.+  |++.|.....|..|+++|++++++..
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            46789999 999999999999999 99999999999998 99999998  99999999999999999999998654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.41  E-value=8.3e-14  Score=105.45  Aligned_cols=67  Identities=34%  Similarity=0.772  Sum_probs=62.6

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      |..|+++| ++++|.|..|++.|.+...|..|+++|+++++|.|..  |++.|.....|..|+++|++++
T Consensus        22 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           22 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHGGGGC--
T ss_pred             HHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCCHHHHHHHHHHhcccC
Confidence            57899999 9999999999999999999999999999999999998  9999999999999999999875

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=1.4e-13  Score=101.21  Aligned_cols=62  Identities=35%  Similarity=0.784  Sum_probs=37.9

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      +.++++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.+...|..|+++|+++++
T Consensus        12 ~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           12 THSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCC
T ss_pred             cCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCC
Confidence            44555666655  6666666666666666666666666644  66666666666666666666554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.7e-13  Score=101.57  Aligned_cols=69  Identities=33%  Similarity=0.653  Sum_probs=63.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      +...+.++++|.|..  |++.|.....|..|+++|+++++|.|++  |++.|.....|..|+++|+++++|.|
T Consensus         9 ~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCcCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            444677889999998  9999999999999999999999999977  99999999999999999999998875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2e-13  Score=108.59  Aligned_cols=65  Identities=15%  Similarity=0.194  Sum_probs=53.3

Q ss_pred             CCCcccCCccCcccccchhhhhhhh-hh---cCCCceecccCCCCCcccchhhhhhh-hhhcCCCCceeccC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQL-VH---TGEKPFQCTFEGCGKRFSLDFNLRTH-VRIHTGDRPYVCPF   75 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~-~H---~~~kpy~C~~~~Cgk~F~~~~~L~~H-~r~H~gekpf~C~~   75 (318)
                      |+++|.|..|++.|.+...|..|++ +|   .+++||.|..  |++.|.....|..| +++|++++||.|.+
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            7788888888888888888888886 47   5577888877  88888888888888 78888888888865

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2.5e-13  Score=99.55  Aligned_cols=65  Identities=42%  Similarity=0.791  Sum_probs=51.4

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      +.++|+++++|.|..  |++.|.....|..|+++|+++++|.|++  |++.|.+...|..|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            455777788888876  8888888888888888888888888866  8888888888888888887653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.37  E-value=3.7e-14  Score=115.17  Aligned_cols=83  Identities=25%  Similarity=0.440  Sum_probs=71.3

Q ss_pred             CCCcccCCccCcccc------cchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCccc
Q psy16882          9 GPRVHVCAECGKAFV------ESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF   82 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~------~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F   82 (318)
                      ..+.+.|++|.+.|.      ....|..|+ .|++++||.|..  |++.|.....|..|+++|  +++|.|.+  |++.|
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f  110 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEF  110 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBC
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCCC--CCccc
Confidence            456788888887776      455666666 688899999988  999999999999999999  88999976  99999


Q ss_pred             CChhHHHHHHHHhccc
Q psy16882         83 AQSTNLKSHILTHAKA   98 (318)
Q Consensus        83 ~~~~~L~~H~r~H~~~   98 (318)
                      .+...|..|+++|++.
T Consensus       111 ~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          111 TSTDSALDHVCKKHNI  126 (129)
T ss_dssp             SSHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHCCc
Confidence            9999999999999875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.9e-14  Score=102.94  Aligned_cols=66  Identities=26%  Similarity=0.414  Sum_probs=57.4

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |..|+++| ++++|.|..|++.|.+...|..       +++|.|..  |++.|.....|..|+++|+++++|.|.+
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            67788888 8889999999999988888877       67899987  9999999999999999999999999865

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.37  E-value=1.9e-13  Score=101.47  Aligned_cols=65  Identities=49%  Similarity=0.887  Sum_probs=61.4

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      |..|+++| ++++|.|..|++.|.+...|..|++.|+++++|.|..  |++.|.....|..|+++|+|
T Consensus        17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           17 LSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHHHHhhCC
Confidence            56899999 9999999999999999999999999999999999998  99999999999999999975

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=3.4e-13  Score=99.93  Aligned_cols=68  Identities=26%  Similarity=0.611  Sum_probs=51.0

Q ss_pred             hhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhh-hcCCC-CceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         27 KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGD-RPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        27 ~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H~ge-kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      +|.+|+++|++++||.|.+  |++.|.....|..|++ .|.++ ++|.|++  |++.|.+...|..|+++|++.
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence            3567777888888888876  8888888888888876 56654 7788866  888888888888888775543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=5.2e-13  Score=97.80  Aligned_cols=64  Identities=52%  Similarity=0.825  Sum_probs=60.4

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      +.++| ++++|.|.+|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            56788 9999999999999999999999999999999999998  9999999999999999998764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=6.2e-13  Score=97.77  Aligned_cols=61  Identities=43%  Similarity=0.927  Sum_probs=59.1

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCce
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY   71 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf   71 (318)
                      ++++|.|..|++.|.+...|..|+++|+++++|.|..  |++.|.....|..|+++|++++||
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            7899999999999999999999999999999999998  999999999999999999999986

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.2e-12  Score=96.96  Aligned_cols=75  Identities=27%  Similarity=0.543  Sum_probs=65.2

Q ss_pred             cCCCceecccCCCCCcccchhhhhhhhh-hcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccccccCCCchhHH
Q psy16882         36 TGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHIL  114 (318)
Q Consensus        36 ~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~~C~~C~~~~  114 (318)
                      +++++|.|.+++|++.|.....|..|++ .|.++++|.|+++.|++.|.+...|..|+++|+++++|.    |..|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~----C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI----CEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCS----CCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCee----CCCCCCCC
Confidence            4678999998889999999999999999 799999999964459999999999999999999998765    55566543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.2e-12  Score=100.38  Aligned_cols=67  Identities=36%  Similarity=0.685  Sum_probs=61.3

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccccc
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLF  105 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~  105 (318)
                      +.++++|.|..  |++.|.....|..|++.|.++++|.|++  |++.|.+...|..|+++|+++++|.|..
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~   69 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQI   69 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSS
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCC
Confidence            45688999998  9999999999999999999999999977  9999999999999999999988766543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=7.5e-13  Score=103.57  Aligned_cols=76  Identities=16%  Similarity=0.276  Sum_probs=69.5

Q ss_pred             CcccccchhhhhhhhhhcCCCceecccCCCCCcc-cchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHH-HHHhc
Q psy16882         19 GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF-SLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH-ILTHA   96 (318)
Q Consensus        19 gk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F-~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H-~r~H~   96 (318)
                      ...|.....|..|++.|.++++|.|..  |++.| .....|..|+++| ++++|.|.+  |++.|.....|..| +++|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcC
Confidence            446788889999999999999999988  99999 9999999999999 999999977  99999999999999 88897


Q ss_pred             ccc
Q psy16882         97 KAK   99 (318)
Q Consensus        97 ~~k   99 (318)
                      +..
T Consensus        88 ~~p   90 (96)
T 2ctd_A           88 SLP   90 (96)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            643

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=5.9e-13  Score=98.64  Aligned_cols=65  Identities=28%  Similarity=0.485  Sum_probs=59.5

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhh-hhcCC-CceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGE-KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~-~H~~~-kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      |.+|+++| ++++|.|.+|++.|.+...|..|++ .|.+. ++|.|..  |++.|.....|..|++.|++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCC
Confidence            57899999 9999999999999999999999997 67764 8999998  99999999999999998554

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.4e-13  Score=109.38  Aligned_cols=78  Identities=21%  Similarity=0.252  Sum_probs=69.0

Q ss_pred             cchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhh--cCCCCcee-ccCCCCCccc--CChhHHHHHHHHhccc
Q psy16882         24 ESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI--HTGDRPYV-CPFDGCNKKF--AQSTNLKSHILTHAKA   98 (318)
Q Consensus        24 ~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~--H~gekpf~-C~~~~C~k~F--~~~~~L~~H~r~H~~~   98 (318)
                      ....|..|+++|+++++|.|..  |++.|.....|..|+++  |.+.+++. |.+  |++.|  .....|..|+++|+++
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~   78 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQ   78 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCC
T ss_pred             cchhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCC
Confidence            3567899999999999999987  99999999999999998  87777655 976  99999  8999999999999999


Q ss_pred             ccccccc
Q psy16882         99 KLLKGLF  105 (318)
Q Consensus        99 k~~~c~~  105 (318)
                      ++|.|..
T Consensus        79 ~~~~C~~   85 (115)
T 2dmi_A           79 KVLKCMY   85 (115)
T ss_dssp             SSCBCSS
T ss_pred             cceECCC
Confidence            9876553

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=4.8e-13  Score=97.32  Aligned_cols=63  Identities=30%  Similarity=0.541  Sum_probs=48.4

Q ss_pred             hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882         34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        34 ~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      .|.++++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.+...|..|+++|+++++
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCC
Confidence            356677788876  8888888888888887777777888866  88888888888888877777665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1e-12  Score=95.50  Aligned_cols=63  Identities=24%  Similarity=0.536  Sum_probs=59.6

Q ss_pred             hh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCce
Q psy16882          7 TH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY   71 (318)
Q Consensus         7 tH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf   71 (318)
                      +| ++++|.|.+|++.|.+...|..|+++|+++++|.|.+  |++.|.....|..|+++|+++++.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCC
Confidence            45 7899999999999999999999999999999999998  999999999999999999998875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=4.1e-13  Score=105.08  Aligned_cols=69  Identities=17%  Similarity=0.247  Sum_probs=62.1

Q ss_pred             hhchhhh-CCCcccCCccCccc-ccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhh-hhhcCCCCceec
Q psy16882          2 RKHLHTH-GPRVHVCAECGKAF-VESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH-VRIHTGDRPYVC   73 (318)
Q Consensus         2 r~HlrtH-g~k~f~C~~Cgk~F-~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H-~r~H~gekpf~C   73 (318)
                      ..|++.| ++++|.|+.|++.| .+...|..|+++| ++++|.|..  |++.|.....|..| +++|+++..|.+
T Consensus        23 ~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           23 EQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             HHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            4577777 89999999999999 9999999999999 999999988  99999999999999 999987655544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.33  E-value=2.7e-12  Score=98.92  Aligned_cols=85  Identities=33%  Similarity=0.679  Sum_probs=68.4

Q ss_pred             CCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccccccCCCc---hhH
Q psy16882         37 GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMC---PHI  113 (318)
Q Consensus        37 ~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~~C~~C---~~~  113 (318)
                      ..++|.|.+++|++.|.....|..|++.|.++++|.|++..|++.|.+...|..|+++|+++++|.|..+-..+   ..+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            35679999777999999999999999999999999996445999999999999999999999987655422222   134


Q ss_pred             HHhhhhcc
Q psy16882        114 LDEMKRHD  121 (318)
Q Consensus       114 ~~~~~~h~  121 (318)
                      ..|++.|.
T Consensus        92 ~~H~~~H~   99 (100)
T 2ebt_A           92 ALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            44666653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.31  E-value=3.6e-12  Score=96.09  Aligned_cols=68  Identities=35%  Similarity=0.786  Sum_probs=60.8

Q ss_pred             CCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccccc
Q psy16882         38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLF  105 (318)
Q Consensus        38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~  105 (318)
                      ..+|.|.+++|++.|.....|..|++.|.++++|.|++..|++.|.+...|..|+++|+++++|.|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK   70 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence            46799988889999999999999999999999999974459999999999999999999998766543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.30  E-value=7.2e-13  Score=104.18  Aligned_cols=70  Identities=19%  Similarity=0.337  Sum_probs=65.2

Q ss_pred             ChhchhhhCCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhh-hcCCCCceecc
Q psy16882          1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCP   74 (318)
Q Consensus         1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H~gekpf~C~   74 (318)
                      |+.|+++| .++|.|.+|++.|.....|..|++ |+++++|.|..  |++.|.....|..|++ .|.++++|.|.
T Consensus        32 l~~H~~~H-~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           32 QGSHERLC-RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLE--CMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHH-HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHC-CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCcc--ccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            56788888 679999999999999999999996 99999999998  9999999999999997 89999999885

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.9e-12  Score=101.88  Aligned_cols=85  Identities=27%  Similarity=0.483  Sum_probs=69.3

Q ss_pred             hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccccccCCCc---
Q psy16882         34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMC---  110 (318)
Q Consensus        34 ~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~~C~~C---  110 (318)
                      .|+++++|.| .  |++.|.....|..|++.|.++++|.|++  |++.|.+...|..|+++|+++++|.|..+-..+   
T Consensus         4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            5889999999 7  9999999999999999999999999977  999999999999999999999877655422211   


Q ss_pred             hhHHHhhhhccCC
Q psy16882        111 PHILDEMKRHDGG  123 (318)
Q Consensus       111 ~~~~~~~~~h~~~  123 (318)
                      ..+..|++.|...
T Consensus        79 ~~l~~H~~~~~~~   91 (110)
T 2csh_A           79 DSFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccc
Confidence            1344466655443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.29  E-value=1.4e-12  Score=90.68  Aligned_cols=55  Identities=40%  Similarity=0.883  Sum_probs=29.8

Q ss_pred             CCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      +++|.|..  |++.|.....|..|+++|+++++|.|++  |++.|.+...|..|+++|+
T Consensus         2 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhc
Confidence            34555554  5555555555555555555555555544  5555555555555555554

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.28  E-value=8.7e-12  Score=95.26  Aligned_cols=66  Identities=29%  Similarity=0.658  Sum_probs=59.7

Q ss_pred             cCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc--ccccccc
Q psy16882         36 TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA--KLLKGLF  105 (318)
Q Consensus        36 ~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~--k~~~c~~  105 (318)
                      .++++|.|..  |++.|.....|..|+++|.++++|.|++  |++.|.+...|..|+++|++.  ++|.|..
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   70 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS   70 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSS
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCC
Confidence            4678999998  9999999999999999999999999977  999999999999999999986  6665443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=1.8e-12  Score=94.80  Aligned_cols=68  Identities=37%  Similarity=0.785  Sum_probs=48.5

Q ss_pred             hhhhhhh-hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         27 KLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        27 ~L~~H~~-~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      .|..|+. +|.++++|.|.++.|++.|.....|..|+++|.++++|.|++  |++.|.+...|..|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            3445544 567777788864348888888888888888888888888865  8888888888888877763

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=3e-12  Score=91.74  Aligned_cols=61  Identities=28%  Similarity=0.660  Sum_probs=46.5

Q ss_pred             hhhcCCCceecccCCCCCcccchhhhhhhhhh-c-CCCCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         33 LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-H-TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        33 ~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~-H-~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ++|++++||.|..  |++.|.....|..|++. | .++++|.|++  |++.|.+...|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            4677777788876  88888888888888776 6 4777888865  88888888888888877764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=1.7e-12  Score=92.98  Aligned_cols=61  Identities=30%  Similarity=0.570  Sum_probs=56.0

Q ss_pred             hhhh-CCCcccCCccCcccccchhhhhhhhh-h-cCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882          5 LHTH-GPRVHVCAECGKAFVESSKLKRHQLV-H-TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus         5 lrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~-H-~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      +++| ++++|.|+.|++.|.+...|..|++. | .++++|.|..  |++.|.....|..|++.|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            3577 89999999999999999999999998 7 5899999998  99999999999999998865

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.26  E-value=3.5e-12  Score=88.58  Aligned_cols=54  Identities=37%  Similarity=0.758  Sum_probs=26.5

Q ss_pred             eecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      |.|..  |++.|.....|..|+++|+++++|.|++  |++.|.+...|..|+++|+++
T Consensus         2 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            2 YICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred             CcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhccc
Confidence            44444  5555555555555555554445555533  555555555555555544443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.26  E-value=2.9e-12  Score=98.52  Aligned_cols=63  Identities=22%  Similarity=0.480  Sum_probs=53.3

Q ss_pred             hhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHH-Hhccc
Q psy16882         32 QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL-THAKA   98 (318)
Q Consensus        32 ~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r-~H~~~   98 (318)
                      +.++...++|.|.+  |++.|.....|..|+++|++++||.|.+  |++.|.+...|.+|++ +|.++
T Consensus        20 ~~~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCC
Confidence            44667778899987  9999999999999999999999999976  9999999999999974 57654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.26  E-value=3.4e-12  Score=88.64  Aligned_cols=57  Identities=37%  Similarity=0.680  Sum_probs=50.6

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      |+++|.|..|++.|.+...|..|+++|++++||.|..  |++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998  99999999999999998863

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.25  E-value=3.4e-12  Score=98.19  Aligned_cols=59  Identities=24%  Similarity=0.620  Sum_probs=54.7

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhh-hhcCCCC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDR   69 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~-r~H~gek   69 (318)
                      ..++|.|++|++.|.+...|..|+++|++++||.|.+  |++.|.....|..|+ +.|.+|.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            5678999999999999999999999999999999998  999999999999997 5687764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.21  E-value=1.1e-11  Score=86.06  Aligned_cols=56  Identities=32%  Similarity=0.676  Sum_probs=53.8

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      ||.|..|++.|.+...|..|+++|+++++|.|..  |++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            6899999999999999999999999999999998  9999999999999999998875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=7.4e-12  Score=99.49  Aligned_cols=67  Identities=22%  Similarity=0.312  Sum_probs=60.7

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhh-hc---CCCCceeccCCCCCcccCChhHHHHH-HHHhcccccccccc
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IH---TGDRPYVCPFDGCNKKFAQSTNLKSH-ILTHAKAKLLKGLF  105 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H---~gekpf~C~~~~C~k~F~~~~~L~~H-~r~H~~~k~~~c~~  105 (318)
                      -++++||.|..  |++.|.....|..|++ .|   .++++|.|.+  |++.|.....|..| +++|+++++|.|..
T Consensus        13 ~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           13 KKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            46789999988  9999999999999998 59   6689999976  99999999999999 89999999987754

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.3e-12  Score=93.12  Aligned_cols=62  Identities=27%  Similarity=0.571  Sum_probs=38.7

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCC---CCceeccCCCCCcccCChhHHHHHHH-Hhccccc
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG---DRPYVCPFDGCNKKFAQSTNLKSHIL-THAKAKL  100 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g---ekpf~C~~~~C~k~F~~~~~L~~H~r-~H~~~k~  100 (318)
                      |+++++|.|.+  |++.|.....|..|+++|++   +++|.|.+  |++.|.+...|..|++ .|.+..+
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            2 SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            55666666665  66666666666666666664   56666655  6666666666666663 3444443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.19  E-value=5.1e-12  Score=95.89  Aligned_cols=69  Identities=36%  Similarity=0.669  Sum_probs=61.5

Q ss_pred             CCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccccccCCCchhHHH
Q psy16882         38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILD  115 (318)
Q Consensus        38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~~C~~C~~~~~  115 (318)
                      ++||.|..  |++.|.....|..|+++|+++++|.|++  |++.|.+...|..|+++|++ .    ++.|..|+..|.
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~----~~~c~~C~~~f~   69 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-L----PILEDKVEELLS   69 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-H----HHHHHHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-C----cchHHHHHHHHH
Confidence            47899998  9999999999999999999999999977  99999999999999999985 3    356777887665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.4e-11  Score=86.44  Aligned_cols=54  Identities=41%  Similarity=0.804  Sum_probs=28.1

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhh-hhcCC
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTG   67 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~-r~H~g   67 (318)
                      +|.|..|++.|.+...|..|+++|+++++|.|..  |++.|.....|..|+ +.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCC
Confidence            4555555555555555555555555555555544  555555555555553 34443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.17  E-value=2.6e-11  Score=90.25  Aligned_cols=58  Identities=41%  Similarity=0.834  Sum_probs=52.3

Q ss_pred             ceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         40 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        40 py~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ||.|.++.|++.|.....|..|+++|.++++|.|++++|++.|.+...|..|+++|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6899333499999999999999999999999999654599999999999999999998

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=1.3e-11  Score=90.14  Aligned_cols=63  Identities=41%  Similarity=0.753  Sum_probs=56.3

Q ss_pred             hhchh-hh-CCCcccCC--ccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcC
Q psy16882          2 RKHLH-TH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus         2 r~Hlr-tH-g~k~f~C~--~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      +.|+. +| ++++|.|+  .|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|+++|+
T Consensus         7 ~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            7 NNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             -CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             cchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            34543 45 88999997  59999999999999999999999999998  9999999999999999884

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.9e-11  Score=90.47  Aligned_cols=65  Identities=28%  Similarity=0.434  Sum_probs=58.5

Q ss_pred             hh-CCCcccCCccCcccccchhhhhhhhhhcC---CCceecccCCCCCcccchhhhhhhh-hhcCCCCceec
Q psy16882          7 TH-GPRVHVCAECGKAFVESSKLKRHQLVHTG---EKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVC   73 (318)
Q Consensus         7 tH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~---~kpy~C~~~~Cgk~F~~~~~L~~H~-r~H~gekpf~C   73 (318)
                      +| ++++|.|.+|++.|.+...|..|+++|.+   +++|.|..  |++.|.....|..|+ +.|.++++...
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            46 89999999999999999999999999986   89999998  999999999999999 56777776654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.16  E-value=1.4e-11  Score=94.18  Aligned_cols=59  Identities=31%  Similarity=0.390  Sum_probs=39.2

Q ss_pred             eecccCCCCCcccchhhhhhhhhh-cCCCCc--------eeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVRI-HTGDRP--------YVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r~-H~gekp--------f~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |.|..  |++.|.....|..|+++ |.++++        |.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus        26 ~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           26 RPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             Ccccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            45554  66666666666666665 655555        67755  77777777777777777777776654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=5.8e-13  Score=96.66  Aligned_cols=70  Identities=21%  Similarity=0.329  Sum_probs=63.6

Q ss_pred             cchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         24 ESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        24 ~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      +...|..|+++|.++++|.|..  |++.|.....|..       +++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             cchhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            4567899999999999999998  9999999999876       78999977  99999999999999999999998765


Q ss_pred             c
Q psy16882        104 L  104 (318)
Q Consensus       104 ~  104 (318)
                      .
T Consensus        71 ~   71 (73)
T 2ctu_A           71 S   71 (73)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=5e-11  Score=83.58  Aligned_cols=56  Identities=32%  Similarity=0.739  Sum_probs=51.6

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHH-HHhccc
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI-LTHAKA   98 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~-r~H~~~   98 (318)
                      +||.|..  |++.|.....|..|+++|+++++|.|++  |++.|.+...|..|+ ++|.++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence            5799987  9999999999999999999999999977  999999999999997 577654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.10  E-value=2.2e-11  Score=98.57  Aligned_cols=62  Identities=26%  Similarity=0.330  Sum_probs=57.0

Q ss_pred             hhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882          2 RKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus         2 r~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      +.|+ .| ++++|.|.+|++.|.+...|..|+++|  ++||.|..  |++.|.....|..|+++|++.
T Consensus        64 ~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           64 YRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            4555 45 899999999999999999999999999  88999988  999999999999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.09  E-value=5.6e-11  Score=86.54  Aligned_cols=61  Identities=36%  Similarity=0.850  Sum_probs=35.2

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      +...++|.|.+++|++.|.....|..|+++|+++++|.|.+..|++.|.+...|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3344556665445666666666666666666666666664323666666666666665543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=6.7e-11  Score=85.13  Aligned_cols=53  Identities=26%  Similarity=0.477  Sum_probs=25.7

Q ss_pred             CCcccCCccCcccccchhhhhhhhhhcCCCceecc-cCCCCCcccchhhhhhhhhhcC
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT-FEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~-~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      .++|.|..|++.|. ...|..|+++ ++++||.|. .  |++.|.....|..|+++|.
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTS
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhc
Confidence            44445555555554 4444445444 444445444 3  4444444444444444443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.04  E-value=1.3e-10  Score=84.64  Aligned_cols=57  Identities=47%  Similarity=0.968  Sum_probs=53.3

Q ss_pred             CCCcccCCc--cCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhc
Q psy16882          9 GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH   65 (318)
Q Consensus         9 g~k~f~C~~--Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H   65 (318)
                      ..++|.|.+  |++.|.....|..|+++|+++++|.|.++.|++.|.....|..|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            678999998  999999999999999999999999997556999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.2e-11  Score=78.95  Aligned_cols=43  Identities=33%  Similarity=0.356  Sum_probs=23.5

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            455555 5555555555555555555555555555555555543

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.3e-11  Score=78.23  Aligned_cols=43  Identities=37%  Similarity=0.617  Sum_probs=22.3

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345555 4555555555555555555555555555555555543

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=77.59  Aligned_cols=42  Identities=38%  Similarity=0.693  Sum_probs=20.5

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            444444444455544  555555555555555445444455443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.7e-11  Score=78.13  Aligned_cols=42  Identities=40%  Similarity=0.788  Sum_probs=21.8

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            3 SGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             SSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.3e-11  Score=77.99  Aligned_cols=42  Identities=40%  Similarity=0.679  Sum_probs=22.7

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            3 SGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             SSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             cccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            455555555555554  555555555555555555555555554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.02  E-value=2.5e-10  Score=87.16  Aligned_cols=62  Identities=26%  Similarity=0.489  Sum_probs=57.9

Q ss_pred             CcccCCccCcccccchhhhhhhhh-hcCCCc--------eecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLV-HTGEKP--------FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~-H~~~kp--------y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      ..|.|..|++.|.+...|..|+++ |.++++        |.|..  |++.|.....|..|+++|+++++|.|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            457899999999999999999998 998887        89987  999999999999999999999999994

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=77.45  Aligned_cols=42  Identities=31%  Similarity=0.525  Sum_probs=20.7

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            3 SGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            444444444555544  555555555555555555555555553

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.01  E-value=9.9e-11  Score=77.95  Aligned_cols=43  Identities=42%  Similarity=0.641  Sum_probs=23.1

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            355555 5555555555555555555555555555555555543

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.7e-11  Score=77.78  Aligned_cols=42  Identities=33%  Similarity=0.457  Sum_probs=21.3

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344445 445555555555555555555555555555555544

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1e-10  Score=77.82  Aligned_cols=42  Identities=43%  Similarity=0.775  Sum_probs=21.8

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            3 SGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             ccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.01  E-value=9.6e-11  Score=77.80  Aligned_cols=43  Identities=40%  Similarity=0.576  Sum_probs=23.7

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             cccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455555555555554  5555555555555555555555555543

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=77.69  Aligned_cols=42  Identities=38%  Similarity=0.653  Sum_probs=20.7

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344444 444555555555555555555555555544455444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=77.27  Aligned_cols=43  Identities=33%  Similarity=0.519  Sum_probs=23.0

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            355555 5555555555555555555555555555555555543

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.5e-11  Score=77.94  Aligned_cols=43  Identities=42%  Similarity=0.638  Sum_probs=22.7

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            355555 5555555555555555555555555555555555543

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=77.22  Aligned_cols=42  Identities=43%  Similarity=0.820  Sum_probs=22.4

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            3 SGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            445555555555544  555555555555555555555555553

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=77.21  Aligned_cols=42  Identities=38%  Similarity=0.606  Sum_probs=21.3

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            444455555555544  555555555555555555555555553

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.00  E-value=1.7e-10  Score=76.84  Aligned_cols=43  Identities=37%  Similarity=0.594  Sum_probs=25.4

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      .|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            355555 5556666666666666666666666666666666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.00  E-value=1.2e-10  Score=77.36  Aligned_cols=42  Identities=40%  Similarity=0.680  Sum_probs=20.7

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            3 SGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            444444444555544  555555555555555555555555543

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=77.43  Aligned_cols=41  Identities=39%  Similarity=0.643  Sum_probs=20.2

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            44444 444455555555555555555554445444444444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.4e-10  Score=77.03  Aligned_cols=42  Identities=45%  Similarity=0.729  Sum_probs=22.0

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            3 SGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=77.63  Aligned_cols=41  Identities=39%  Similarity=0.572  Sum_probs=20.1

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            44444 444455555555554444444454444444444444

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=77.49  Aligned_cols=43  Identities=42%  Similarity=0.677  Sum_probs=22.2

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            345555 4555555555555555555555555555555555543

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=77.26  Aligned_cols=43  Identities=40%  Similarity=0.624  Sum_probs=24.4

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            3 SGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             cccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455555555555554  5555555555555555555555555543

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=77.16  Aligned_cols=42  Identities=40%  Similarity=0.682  Sum_probs=22.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            444555555555554  555555555555555555555555554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=77.34  Aligned_cols=42  Identities=40%  Similarity=0.753  Sum_probs=20.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            444444444555544  555555555555555555444555443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=77.27  Aligned_cols=43  Identities=40%  Similarity=0.628  Sum_probs=23.7

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            355555 5555555555555555555555555555555555543

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=77.33  Aligned_cols=42  Identities=43%  Similarity=0.828  Sum_probs=23.0

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            3 SGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             STTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             cccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455555555555554  555555555555555555555555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=77.08  Aligned_cols=42  Identities=40%  Similarity=0.682  Sum_probs=22.3

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            3 SGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555544  555555555555555555555555553

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.6e-10  Score=76.68  Aligned_cols=41  Identities=49%  Similarity=0.760  Sum_probs=20.9

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            44445 445555555555555555555555555555555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=77.24  Aligned_cols=42  Identities=45%  Similarity=0.740  Sum_probs=21.2

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            444455555555544  555555555555555555555555553

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.2e-10  Score=77.45  Aligned_cols=43  Identities=35%  Similarity=0.587  Sum_probs=24.3

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|.+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            3 SGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555555555555554  5555555555555555555555555543

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.3e-10  Score=77.08  Aligned_cols=42  Identities=33%  Similarity=0.522  Sum_probs=22.0

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            3 SGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             ccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=76.91  Aligned_cols=41  Identities=34%  Similarity=0.622  Sum_probs=20.1

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            44444 444455555555554444444454444444444444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=76.31  Aligned_cols=41  Identities=29%  Similarity=0.428  Sum_probs=20.8

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|..|++.|.+...|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            44444 445555555555555555555555555555555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=76.44  Aligned_cols=42  Identities=48%  Similarity=0.770  Sum_probs=20.7

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444444555544  555555555555555555555555543

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.6e-10  Score=76.82  Aligned_cols=43  Identities=42%  Similarity=0.689  Sum_probs=24.0

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            3 SGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             cccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            455555555555554  5555555555555555555555555543

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.6e-10  Score=76.01  Aligned_cols=42  Identities=33%  Similarity=0.546  Sum_probs=20.4

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444455544  555555555555555445444555443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.8e-10  Score=76.51  Aligned_cols=42  Identities=40%  Similarity=0.674  Sum_probs=22.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555544  555555555555555555555555554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.97  E-value=1.9e-10  Score=76.29  Aligned_cols=42  Identities=38%  Similarity=0.691  Sum_probs=22.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            3 SGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             SCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCC
Confidence            445555555555554  555555555555555555555555553

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.9e-10  Score=76.42  Aligned_cols=41  Identities=29%  Similarity=0.523  Sum_probs=20.7

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444 445555555555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.4e-10  Score=76.08  Aligned_cols=42  Identities=38%  Similarity=0.676  Sum_probs=21.9

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.3e-10  Score=81.46  Aligned_cols=60  Identities=23%  Similarity=0.497  Sum_probs=54.1

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc-CCCCCcccCChhHHHHHHHHhccccc
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP-FDGCNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~-~~~C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      +.+.+||.|..  |++.|. ...|..|+++ ++++||.|+ .  |++.|.....|..|+++|....+
T Consensus         5 ~C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhcccCc
Confidence            45678999988  999999 9999999999 999999996 6  99999999999999999876543

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.5e-10  Score=77.02  Aligned_cols=41  Identities=41%  Similarity=0.614  Sum_probs=20.8

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            44444 445555555555555555555555555555555544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.95  E-value=2.7e-10  Score=75.80  Aligned_cols=42  Identities=31%  Similarity=0.575  Sum_probs=22.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             SCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444555555555554  555555555555555555555555553

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.5e-10  Score=76.07  Aligned_cols=42  Identities=36%  Similarity=0.583  Sum_probs=24.6

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55555 5555666666666666566666665565555555544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.95  E-value=1.2e-10  Score=83.16  Aligned_cols=54  Identities=19%  Similarity=0.383  Sum_probs=33.1

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhh
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   59 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~   59 (318)
                      |..|+++| ++++|.|+.|++.|.....|.   ++|++++||.|..  |++.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCC--CCCccccCcccc
Confidence            44566666 666666666666666655554   5566666666665  666666555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=75.24  Aligned_cols=43  Identities=40%  Similarity=0.642  Sum_probs=30.1

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            466666 6677777777777777777777777777777777664

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.94  E-value=3.1e-10  Score=75.29  Aligned_cols=43  Identities=33%  Similarity=0.419  Sum_probs=28.4

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466666 6666666666666666666666666666666666654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=75.38  Aligned_cols=42  Identities=50%  Similarity=0.738  Sum_probs=23.4

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            355555 555555555555555555555555555555555554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.94  E-value=3.4e-10  Score=75.21  Aligned_cols=43  Identities=35%  Similarity=0.546  Sum_probs=28.8

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|+.|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            466666 6666666666666666666666666666666666654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.5e-10  Score=75.82  Aligned_cols=43  Identities=35%  Similarity=0.613  Sum_probs=23.1

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|.+
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            444555555555554  5555555555555555555555555543

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=75.35  Aligned_cols=42  Identities=40%  Similarity=0.638  Sum_probs=21.2

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            344445 445555555555555555555555555555555544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=75.40  Aligned_cols=42  Identities=40%  Similarity=0.670  Sum_probs=22.3

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|+.|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            345555 555555555555555555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.4e-10  Score=75.31  Aligned_cols=42  Identities=43%  Similarity=0.694  Sum_probs=22.0

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|..|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            345555 455555555555555555555555555555555543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2e-10  Score=76.36  Aligned_cols=42  Identities=43%  Similarity=0.822  Sum_probs=22.0

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.5e-10  Score=75.13  Aligned_cols=43  Identities=33%  Similarity=0.534  Sum_probs=24.1

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            355555 5555555555555555555555555555555555543

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.5e-10  Score=74.98  Aligned_cols=42  Identities=36%  Similarity=0.675  Sum_probs=22.8

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|+.|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355555 555555555555555555555555555555555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4e-10  Score=74.73  Aligned_cols=43  Identities=44%  Similarity=0.614  Sum_probs=26.1

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            455566 5566666666666666666666666666666666654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.2e-10  Score=75.19  Aligned_cols=40  Identities=28%  Similarity=0.398  Sum_probs=19.7

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             CcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCC
Confidence            444455555555533  5555555555555555555444433

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.6e-10  Score=75.20  Aligned_cols=42  Identities=38%  Similarity=0.662  Sum_probs=20.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhh-hcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|++ +|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            3 SGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             cccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            444444444555544  5555555555555544 45445555543

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.2e-10  Score=75.21  Aligned_cols=42  Identities=40%  Similarity=0.603  Sum_probs=22.5

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            355555 555555555555555555555555555555555554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3e-10  Score=75.45  Aligned_cols=42  Identities=36%  Similarity=0.566  Sum_probs=21.3

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344445 445555555555555555555555555555555543

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.7e-10  Score=74.90  Aligned_cols=43  Identities=40%  Similarity=0.609  Sum_probs=24.9

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            355555 5555666666666655555666655555555555543

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.1e-10  Score=74.89  Aligned_cols=43  Identities=42%  Similarity=0.634  Sum_probs=27.1

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      .|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            356666 6666666666666666666666666666666666654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.92  E-value=3.7e-10  Score=74.98  Aligned_cols=43  Identities=40%  Similarity=0.637  Sum_probs=25.4

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            455555 5556666666666666666666666666666666553

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.8e-10  Score=74.93  Aligned_cols=43  Identities=44%  Similarity=0.688  Sum_probs=26.3

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            455566 5666666666666666666666666666666666654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.9e-10  Score=74.57  Aligned_cols=41  Identities=37%  Similarity=0.471  Sum_probs=21.2

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            344555 45555555555555555555555555555555544

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.7e-10  Score=75.00  Aligned_cols=41  Identities=37%  Similarity=0.676  Sum_probs=21.8

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45555 455555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.3e-10  Score=75.37  Aligned_cols=41  Identities=44%  Similarity=0.604  Sum_probs=21.6

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45555 455555555555555555555555555555555554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.8e-10  Score=74.92  Aligned_cols=43  Identities=37%  Similarity=0.595  Sum_probs=24.3

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455555 5555555555555555555555555555555555543

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.3e-10  Score=75.11  Aligned_cols=40  Identities=35%  Similarity=0.457  Sum_probs=20.9

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emm_A            3 SGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTS
T ss_pred             CcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCC
Confidence            445555555555543  5555555555555555555555443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.9e-10  Score=73.19  Aligned_cols=40  Identities=35%  Similarity=0.565  Sum_probs=21.3

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44555 55555555555555555555555555555555544

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.92  E-value=3.2e-10  Score=75.44  Aligned_cols=41  Identities=46%  Similarity=0.703  Sum_probs=21.0

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44455 445555555555555555555555555555555543

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.4e-10  Score=75.29  Aligned_cols=43  Identities=37%  Similarity=0.636  Sum_probs=24.3

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455555 5555555555555555555555555555555555543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.5e-10  Score=75.10  Aligned_cols=42  Identities=40%  Similarity=0.680  Sum_probs=22.5

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            355555 555555555555555555555555555555555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.2e-10  Score=75.18  Aligned_cols=43  Identities=42%  Similarity=0.684  Sum_probs=24.5

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|++
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            555555555555554  5555555555555555555555555543

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4e-10  Score=74.85  Aligned_cols=43  Identities=42%  Similarity=0.627  Sum_probs=24.1

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      .|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            355555 5555555555555555555555555555555555543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.4e-10  Score=75.31  Aligned_cols=41  Identities=37%  Similarity=0.511  Sum_probs=20.7

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            44444 445555555555555555555555555555555544

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.92  E-value=3.9e-10  Score=73.30  Aligned_cols=41  Identities=32%  Similarity=0.603  Sum_probs=21.2

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344455555555544  55555555555555555555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.4e-10  Score=75.28  Aligned_cols=42  Identities=38%  Similarity=0.665  Sum_probs=21.8

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.7e-10  Score=75.83  Aligned_cols=40  Identities=30%  Similarity=0.565  Sum_probs=21.1

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoo_A            3 SGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSG   42 (46)
T ss_dssp             CCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSC
T ss_pred             CCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCC
Confidence            455555555555543  5555555555555555555555443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.7e-10  Score=75.11  Aligned_cols=41  Identities=39%  Similarity=0.635  Sum_probs=20.2

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444 444455555555555555555554445444444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.9e-10  Score=74.88  Aligned_cols=44  Identities=39%  Similarity=0.702  Sum_probs=34.1

Q ss_pred             hhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        30 ~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      +|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4677777778888876  8888888888888888888888888755

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.6e-10  Score=74.93  Aligned_cols=42  Identities=43%  Similarity=0.712  Sum_probs=21.5

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            444455555555544  555555555555555555555555553

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3e-10  Score=75.36  Aligned_cols=42  Identities=43%  Similarity=0.723  Sum_probs=23.6

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      .|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            355555 555555555555555555555555555555555554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.91  E-value=3.7e-10  Score=75.12  Aligned_cols=40  Identities=35%  Similarity=0.551  Sum_probs=20.8

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            3 SGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCC
Confidence            445555555555543  5555555555555555555555443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=74.95  Aligned_cols=42  Identities=38%  Similarity=0.670  Sum_probs=21.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.5e-10  Score=75.10  Aligned_cols=42  Identities=38%  Similarity=0.742  Sum_probs=20.3

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            3 SGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            444444444444444  444444444444444444444444443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.2e-10  Score=74.62  Aligned_cols=40  Identities=28%  Similarity=0.503  Sum_probs=19.6

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|++  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eov_A            3 SGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSG   42 (46)
T ss_dssp             CCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCC
Confidence            444455555555543  5555555555555555555444433

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.2e-10  Score=75.29  Aligned_cols=40  Identities=30%  Similarity=0.514  Sum_probs=20.7

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emp_A            3 SGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCS
T ss_pred             cccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCC
Confidence            445555555555543  5555555555555555555555443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.6e-10  Score=75.07  Aligned_cols=42  Identities=38%  Similarity=0.611  Sum_probs=21.1

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      |+++| ++++|.|+.|++.|.+...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            44444 4455555555555555555555555555555555443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.3e-10  Score=74.79  Aligned_cols=42  Identities=40%  Similarity=0.652  Sum_probs=24.4

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            355555 555566666666665555566665555555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.4e-10  Score=74.75  Aligned_cols=41  Identities=44%  Similarity=0.673  Sum_probs=20.1

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|..|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44444 444455555555555444555554444444444443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.3e-10  Score=74.59  Aligned_cols=43  Identities=40%  Similarity=0.551  Sum_probs=24.8

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455555 5555556556555555555555555555555555543

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.91  E-value=5.1e-10  Score=74.21  Aligned_cols=43  Identities=40%  Similarity=0.552  Sum_probs=26.5

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      .|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            455666 5666666666666666666666666666666666654

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=74.93  Aligned_cols=42  Identities=43%  Similarity=0.686  Sum_probs=22.4

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      .|+++| ++++|.|..|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355555 555555555555555555555555555555555553

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.3e-10  Score=74.70  Aligned_cols=42  Identities=43%  Similarity=0.721  Sum_probs=20.8

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            444444445555544  555555555555555555555555553

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.4e-10  Score=74.53  Aligned_cols=43  Identities=44%  Similarity=0.718  Sum_probs=26.1

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            555566666666655  6666666666666666666666666643

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.3e-10  Score=75.27  Aligned_cols=40  Identities=35%  Similarity=0.623  Sum_probs=21.6

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emh_A            3 SGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSS
T ss_pred             CCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCC
Confidence            455555555555544  5555555555555555555555443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.2e-10  Score=74.75  Aligned_cols=41  Identities=44%  Similarity=0.711  Sum_probs=19.8

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            44444 444444444444444444444444444444444443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.2e-10  Score=72.60  Aligned_cols=40  Identities=28%  Similarity=0.460  Sum_probs=21.7

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            44455 55555555555555555555555555555555554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.6e-10  Score=74.53  Aligned_cols=43  Identities=42%  Similarity=0.661  Sum_probs=26.5

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            455666 5666666666666666666666666666666666654

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=74.81  Aligned_cols=42  Identities=43%  Similarity=0.692  Sum_probs=21.7

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5.7e-10  Score=74.07  Aligned_cols=43  Identities=37%  Similarity=0.613  Sum_probs=27.0

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      .|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            355666 5666666666666666666666666666666666654

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.4e-10  Score=73.70  Aligned_cols=41  Identities=39%  Similarity=0.510  Sum_probs=21.6

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            345555 55555555555555555555555555555555554

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.4e-10  Score=74.21  Aligned_cols=42  Identities=36%  Similarity=0.619  Sum_probs=25.7

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55556 5566666666666666666666666666666666654

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4e-10  Score=74.71  Aligned_cols=42  Identities=45%  Similarity=0.772  Sum_probs=21.1

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444455555555544  555555555555555555555555543

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.90  E-value=5.1e-10  Score=74.43  Aligned_cols=42  Identities=43%  Similarity=0.729  Sum_probs=20.8

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            3 SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444444455555544  555555555555555555555555553

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.3e-10  Score=73.95  Aligned_cols=40  Identities=30%  Similarity=0.531  Sum_probs=19.8

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCC
Confidence            344455555555543  5555555555555555555544433

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4e-10  Score=74.13  Aligned_cols=41  Identities=20%  Similarity=0.339  Sum_probs=20.0

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            444444444454444  55555544555555444444444444

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.2e-10  Score=74.28  Aligned_cols=43  Identities=44%  Similarity=0.647  Sum_probs=26.4

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      +|+++| ++++|.|..|++.|.+...|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            455666 5666666666666666666666666666666666653

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.6e-10  Score=75.08  Aligned_cols=42  Identities=40%  Similarity=0.729  Sum_probs=21.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             cCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            444555555555544  555555555555555555555555553

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.9e-10  Score=74.29  Aligned_cols=42  Identities=38%  Similarity=0.542  Sum_probs=22.4

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            3 SGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             CcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555544  555555555555555555555555553

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.6e-10  Score=75.20  Aligned_cols=42  Identities=36%  Similarity=0.551  Sum_probs=23.4

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            455555 555555555555555555555555555555555553

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.1e-10  Score=74.58  Aligned_cols=40  Identities=30%  Similarity=0.507  Sum_probs=20.2

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            44445 44555555555555555555555555555555444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.6e-10  Score=73.86  Aligned_cols=43  Identities=30%  Similarity=0.560  Sum_probs=27.5

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|.+
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            555666666666655  6666666666666666666666666644

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=5e-10  Score=73.65  Aligned_cols=41  Identities=17%  Similarity=0.365  Sum_probs=21.5

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            345555 55555555555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.2e-10  Score=73.99  Aligned_cols=42  Identities=38%  Similarity=0.522  Sum_probs=24.7

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            55555 5555666666666666666666666666555665544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.4e-10  Score=74.38  Aligned_cols=42  Identities=38%  Similarity=0.748  Sum_probs=20.9

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            344444455555544  555555555555555555555555543

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.8e-10  Score=74.15  Aligned_cols=41  Identities=32%  Similarity=0.566  Sum_probs=21.1

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44455 445555555555555555555555555555555543

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.2e-10  Score=74.81  Aligned_cols=41  Identities=37%  Similarity=0.481  Sum_probs=20.4

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444 444555555555555555555555555544454443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.88  E-value=7.6e-10  Score=73.55  Aligned_cols=42  Identities=31%  Similarity=0.411  Sum_probs=23.8

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45555 5555555555555555555555555555555555543

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.9e-10  Score=74.49  Aligned_cols=42  Identities=33%  Similarity=0.483  Sum_probs=25.9

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666 566666666666666666666666666666666654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=7.7e-10  Score=73.42  Aligned_cols=41  Identities=37%  Similarity=0.591  Sum_probs=19.7

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            44444 444444444444444444444444444444444444

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=8e-10  Score=73.34  Aligned_cols=42  Identities=26%  Similarity=0.345  Sum_probs=20.9

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            3 SGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             cccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444455555544  555555555555555555555555553

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.4e-10  Score=74.17  Aligned_cols=40  Identities=33%  Similarity=0.526  Sum_probs=20.8

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            3 SGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCC
Confidence            445555555555543  5555555555555555555555443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.7e-10  Score=73.38  Aligned_cols=41  Identities=32%  Similarity=0.467  Sum_probs=23.8

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      .|+++| ++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            355555 55556666666666555555556555555555554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.7e-10  Score=73.73  Aligned_cols=42  Identities=33%  Similarity=0.538  Sum_probs=22.5

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.+
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            45555 5555555555555555555555555555555555543

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1e-09  Score=72.94  Aligned_cols=41  Identities=37%  Similarity=0.566  Sum_probs=22.5

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555 555555555555555555555555555555555553

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.86  E-value=9.5e-10  Score=75.90  Aligned_cols=50  Identities=26%  Similarity=0.312  Sum_probs=29.1

Q ss_pred             CcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccc
Q psy16882         50 KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLL  101 (318)
Q Consensus        50 k~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~  101 (318)
                      +.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCC
Confidence            44555555666666666666666644  666666666666666666555543

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.5e-10  Score=73.98  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=22.9

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGP   43 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            455555555555544  55555555555555555555554443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.85  E-value=1.4e-09  Score=75.04  Aligned_cols=52  Identities=21%  Similarity=0.326  Sum_probs=49.0

Q ss_pred             CcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCcee
Q psy16882         19 GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV   72 (318)
Q Consensus        19 gk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~   72 (318)
                      ++.|.+...|..|+++|+++++|.|..  |++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            578999999999999999999999988  9999999999999999999999873

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=7.8e-10  Score=71.96  Aligned_cols=41  Identities=41%  Similarity=0.775  Sum_probs=20.5

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            344444555555544  55555555555555555555555444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.7e-10  Score=72.18  Aligned_cols=40  Identities=33%  Similarity=0.641  Sum_probs=22.1

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      |+++| ++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44555 55555555555555555555555555555555544

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=8.4e-10  Score=73.34  Aligned_cols=41  Identities=34%  Similarity=0.407  Sum_probs=20.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC-CCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG-DRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g-ekpf~C   73 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|++ +++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            444444455555544  55555555555555555554 455544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7e-10  Score=73.52  Aligned_cols=41  Identities=46%  Similarity=0.775  Sum_probs=20.2

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             cccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            444444444555544  55555555555555555544455544

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.2e-10  Score=73.90  Aligned_cols=42  Identities=26%  Similarity=0.383  Sum_probs=24.9

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555 556666666666666666666666666655565553

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.84  E-value=9.2e-10  Score=71.40  Aligned_cols=41  Identities=29%  Similarity=0.473  Sum_probs=19.8

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            334444444455544  55555555555555544544444444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.84  E-value=1.2e-09  Score=70.88  Aligned_cols=40  Identities=35%  Similarity=0.523  Sum_probs=19.1

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            34444 44444444444444444444444444444444444

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=72.70  Aligned_cols=42  Identities=40%  Similarity=0.622  Sum_probs=24.4

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhh-hhcCCCceeccc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTF   45 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~-~H~~~kpy~C~~   45 (318)
                      |+++| ++++|.|.+|++.|.+...|..|++ +|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            55555 5555666666666655555666655 555555555543

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=72.60  Aligned_cols=42  Identities=40%  Similarity=0.701  Sum_probs=25.4

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            555566666666655  666666666666666666666666654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=72.73  Aligned_cols=42  Identities=43%  Similarity=0.832  Sum_probs=20.8

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444455555544  555555555555555555555555543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=72.69  Aligned_cols=42  Identities=45%  Similarity=0.665  Sum_probs=25.6

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566 556666666666666666666666666666666654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.2e-09  Score=72.46  Aligned_cols=43  Identities=42%  Similarity=0.706  Sum_probs=28.2

Q ss_pred             hhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        30 ~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      +|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3566666666666665  666666666666666666666666664

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.1e-10  Score=73.16  Aligned_cols=40  Identities=28%  Similarity=0.502  Sum_probs=20.3

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSG   42 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCC
Confidence            444555555555543  5555555555555555555554443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=72.23  Aligned_cols=42  Identities=40%  Similarity=0.771  Sum_probs=27.2

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|+.|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            466666 666666666666666666666666666666666664

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.8e-10  Score=72.90  Aligned_cols=41  Identities=37%  Similarity=0.707  Sum_probs=19.8

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            3 SGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            444444444444444  44444444444444444444444444

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.83  E-value=1e-09  Score=72.96  Aligned_cols=41  Identities=29%  Similarity=0.489  Sum_probs=20.7

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            3 SGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            444555555555543  55555555555555555555544443

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.1e-09  Score=72.55  Aligned_cols=41  Identities=32%  Similarity=0.492  Sum_probs=21.2

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            3 SGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             ccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            445555555555543  55555555555555555555554443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.2e-09  Score=72.27  Aligned_cols=42  Identities=43%  Similarity=0.725  Sum_probs=23.4

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555555555554  555555555555555555555555553

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=72.30  Aligned_cols=41  Identities=41%  Similarity=0.577  Sum_probs=20.3

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444 444555555555555555555555555544555443

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.3e-09  Score=72.33  Aligned_cols=42  Identities=45%  Similarity=0.730  Sum_probs=25.0

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555555566666655  666666666666666666666666554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=72.51  Aligned_cols=42  Identities=40%  Similarity=0.712  Sum_probs=24.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            555555555566654  666666666666666556555555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=1.7e-09  Score=74.73  Aligned_cols=46  Identities=33%  Similarity=0.615  Sum_probs=26.5

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhh-hcCCCCceeccCCCCCcccCC
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQ   84 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H~gekpf~C~~~~C~k~F~~   84 (318)
                      |.++++|.|..  |++.|.....|..|++ +|+++++|.|.+  |++.|.+
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCC
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCC
Confidence            44555566654  6666666666666654 566666666644  6666543

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.6e-09  Score=72.00  Aligned_cols=43  Identities=44%  Similarity=0.821  Sum_probs=28.4

Q ss_pred             hhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        30 ~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      +|+++|+++++|.|..  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4566666666666665  666666666666666666666666664

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.3e-09  Score=71.84  Aligned_cols=41  Identities=32%  Similarity=0.444  Sum_probs=21.2

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      .|+++| ++++|.|.+|++.|.+...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            344555 45555555555555555555555555555555543

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=72.05  Aligned_cols=42  Identities=40%  Similarity=0.695  Sum_probs=24.5

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|..|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            355555 555566666666666666666665556555555554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.5e-09  Score=70.39  Aligned_cols=41  Identities=41%  Similarity=0.733  Sum_probs=27.5

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            566666666666665  66666666666666666666666665

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=71.97  Aligned_cols=42  Identities=40%  Similarity=0.721  Sum_probs=25.3

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555566666666655  666666666666666666666666654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=71.80  Aligned_cols=42  Identities=36%  Similarity=0.642  Sum_probs=24.7

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            555555555666654  666666666666666666555555553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=72.05  Aligned_cols=42  Identities=45%  Similarity=0.740  Sum_probs=23.6

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555555555554  555555555555555555555555553

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.7e-09  Score=71.14  Aligned_cols=40  Identities=35%  Similarity=0.496  Sum_probs=20.8

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            44444 45555555555555555555555555555555544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=71.89  Aligned_cols=41  Identities=39%  Similarity=0.606  Sum_probs=26.6

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            55666 666666666666666666666666666666666664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.3e-09  Score=68.71  Aligned_cols=41  Identities=22%  Similarity=0.449  Sum_probs=24.0

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            455566666666644  66666666666666666666555543

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=72.09  Aligned_cols=41  Identities=27%  Similarity=0.390  Sum_probs=21.3

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            3 SGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            445555555555543  55555555555555555555554443

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=71.73  Aligned_cols=42  Identities=40%  Similarity=0.704  Sum_probs=25.7

Q ss_pred             hhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         32 QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        32 ~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      +++|+++++|.|..  |++.|.....|..|+++|+++++|.|.+
T Consensus         4 ~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            4 GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            44556666666655  6666666666666666666666666644

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.79  E-value=6.6e-10  Score=79.31  Aligned_cols=54  Identities=15%  Similarity=0.391  Sum_probs=47.8

Q ss_pred             hhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882         28 LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL   88 (318)
Q Consensus        28 L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L   88 (318)
                      |..|+++|++++||.|..  |++.|.....|.   ++|+++++|.|.+  |++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCC--CCCccccCccc
Confidence            678999999999999987  999999988886   7899999999977  99999876554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=70.80  Aligned_cols=41  Identities=37%  Similarity=0.559  Sum_probs=19.9

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            444444444444444  44555444445445444444444444

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=3.7e-09  Score=72.96  Aligned_cols=46  Identities=30%  Similarity=0.539  Sum_probs=41.5

Q ss_pred             hh-CCCcccCCccCcccccchhhhhhhh-hhcCCCceecccCCCCCcccc
Q psy16882          7 TH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSL   54 (318)
Q Consensus         7 tH-g~k~f~C~~Cgk~F~~~~~L~~H~~-~H~~~kpy~C~~~~Cgk~F~~   54 (318)
                      .| ++++|.|.+|++.|.+...|..|++ +|++++||.|.+  |++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCC
Confidence            45 7899999999999999999999997 899999999987  9999975

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2e-09  Score=70.67  Aligned_cols=41  Identities=17%  Similarity=0.248  Sum_probs=22.6

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      +|+++| ++++|.|..|++.|.+...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            355555 55555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.1e-09  Score=69.90  Aligned_cols=41  Identities=32%  Similarity=0.461  Sum_probs=21.7

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            3 SGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            445555555555543  55555555555555555555555444

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.2e-09  Score=70.44  Aligned_cols=42  Identities=31%  Similarity=0.615  Sum_probs=24.9

Q ss_pred             hhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        60 ~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      +|+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3555566666666644  66666666666666666666555544

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=4.1e-09  Score=68.94  Aligned_cols=42  Identities=31%  Similarity=0.491  Sum_probs=24.4

Q ss_pred             hhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        60 ~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      .|+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            3555566666666644  66666666666666666665555543

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.9e-09  Score=70.05  Aligned_cols=42  Identities=26%  Similarity=0.511  Sum_probs=23.6

Q ss_pred             hhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        60 ~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      +|+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            3555555555555544  55555555555555555555555544

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.9e-09  Score=71.58  Aligned_cols=40  Identities=38%  Similarity=0.629  Sum_probs=20.3

Q ss_pred             hhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          6 HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         6 rtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      ++| ++++|.|.+|++.|.+...|..|+++|++++||.|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            344 4455555555555555555555555555555555543

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4e-09  Score=69.22  Aligned_cols=41  Identities=27%  Similarity=0.468  Sum_probs=22.6

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            455555555555544  55555555555555555555555443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=4.5e-09  Score=69.53  Aligned_cols=41  Identities=29%  Similarity=0.499  Sum_probs=23.8

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            3 SGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            555555556666644  66666666666666666655555544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.1e-09  Score=70.48  Aligned_cols=40  Identities=33%  Similarity=0.462  Sum_probs=20.2

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            3 SGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             SCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCC
Confidence            444555555555543  5555555555555555555544443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=4.9e-09  Score=69.53  Aligned_cols=41  Identities=27%  Similarity=0.450  Sum_probs=20.3

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            3 SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            444455555555533  55555555555555555555444443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.1e-09  Score=70.61  Aligned_cols=39  Identities=41%  Similarity=0.805  Sum_probs=19.9

Q ss_pred             hhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          6 HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         6 rtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      ++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            444 445555555555555555555555555555555543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.7e-09  Score=70.03  Aligned_cols=42  Identities=24%  Similarity=0.463  Sum_probs=28.0

Q ss_pred             hhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        60 ~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      .|+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4666666666777755  77777777777777766666666554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=2.8e-09  Score=69.27  Aligned_cols=40  Identities=30%  Similarity=0.502  Sum_probs=19.9

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      |+++| ++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34444 44555555555555555555555555555554443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=2.8e-09  Score=70.72  Aligned_cols=41  Identities=24%  Similarity=0.361  Sum_probs=22.4

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcC-CCceecc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG-EKPFQCT   44 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~-~kpy~C~   44 (318)
                      |+++| ++++|.|.+|++.|.+...|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45555 55555555555555555555555555555 5555553

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.6e-09  Score=70.07  Aligned_cols=39  Identities=38%  Similarity=0.577  Sum_probs=19.4

Q ss_pred             hhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          6 HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         6 rtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      ++| ++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            344 444555555555555555555555555555555544

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.6e-09  Score=79.61  Aligned_cols=67  Identities=21%  Similarity=0.332  Sum_probs=45.7

Q ss_pred             hhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         26 SKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        26 ~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      ..|..|+.+|.+.+++.|..  |++.|. ...|..|+ .|.++++|.|+.  |++.|. ...|..|+++|.+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCCc
Confidence            45666777777777777766  777773 66777777 677777777754  777666 366777777776553

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=4e-09  Score=69.98  Aligned_cols=42  Identities=38%  Similarity=0.721  Sum_probs=27.5

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceecc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   74 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~   74 (318)
                      |+++|+++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666666665  666666666666666666666666664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.7e-09  Score=70.60  Aligned_cols=42  Identities=38%  Similarity=0.614  Sum_probs=22.7

Q ss_pred             hchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          3 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         3 ~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      +|+++| ++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355555 555555555555555555555555555555555553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=5.7e-09  Score=69.22  Aligned_cols=42  Identities=26%  Similarity=0.546  Sum_probs=26.2

Q ss_pred             hhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        60 ~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      .|+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3556666666666654  66666666666666666666665554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=1.1e-09  Score=84.50  Aligned_cols=56  Identities=14%  Similarity=0.201  Sum_probs=35.6

Q ss_pred             hhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882          6 HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus         6 rtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      ++| ++++|.|.+|++.|.....|..|+++|++++||.|..  |    .....|..|.+.|.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--~----~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR--Q----ERRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC--C----SCCCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch--h----hhHHHHHhhhccccc
Confidence            345 6667777777777777777777777777666776643  3    344556666666654

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=5e-09  Score=67.92  Aligned_cols=41  Identities=29%  Similarity=0.668  Sum_probs=25.2

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            555666666666644  66666666666666666666665543

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.2e-09  Score=70.49  Aligned_cols=41  Identities=32%  Similarity=0.513  Sum_probs=19.9

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++|++++||.|..  |++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            444444444444444  44444444444444444444444444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.72  E-value=7.4e-09  Score=67.00  Aligned_cols=41  Identities=27%  Similarity=0.513  Sum_probs=38.3

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            788999999999977  99999999999999999999998865

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=4.4e-09  Score=69.46  Aligned_cols=40  Identities=38%  Similarity=0.668  Sum_probs=22.3

Q ss_pred             hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        34 ~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      .|++++||.|..  |++.|.....|..|+++|+++++|.|++
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence            345555555554  5555555555555555555555555544

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.6e-09  Score=69.88  Aligned_cols=40  Identities=50%  Similarity=0.811  Sum_probs=23.2

Q ss_pred             hhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         32 QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        32 ~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      .++|+++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            4 GSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCC
Confidence            34455555566655  66666666666666656655556555

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=6.2e-09  Score=69.87  Aligned_cols=42  Identities=29%  Similarity=0.564  Sum_probs=26.5

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCc
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK   80 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k   80 (318)
                      |.++++|.|..  |++.|.....|..|+++|+++++|.|.+  |++
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            7 GRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            45556666665  6666666666666666666666666655  654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6.7e-09  Score=68.30  Aligned_cols=40  Identities=30%  Similarity=0.409  Sum_probs=20.8

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            3 SGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCC
Confidence            445555555555543  5555555555555555555555443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=4.3e-09  Score=69.80  Aligned_cols=38  Identities=34%  Similarity=0.650  Sum_probs=18.6

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHHHHHhccccccc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLK  102 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~  102 (318)
                      ++|+++++|.|.+  |++.|.+...|..|+++|+++++|.
T Consensus         5 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytt_A            5 SSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSG   42 (46)
T ss_dssp             SSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCS
T ss_pred             CCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCC
Confidence            3444455555543  5555555555555555555444433

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.3e-08  Score=66.72  Aligned_cols=41  Identities=22%  Similarity=0.200  Sum_probs=24.5

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            455566666666644  66666666666666666666655543

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=2.6e-09  Score=79.59  Aligned_cols=64  Identities=27%  Similarity=0.427  Sum_probs=57.1

Q ss_pred             Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882          1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus         1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      |..|+++| +.+++.|..|++.|. ...|..|+ .|.+++||.|..  |++.|. ...|..|+++|.+++
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCCc
Confidence            56788888 999999999999995 89999999 899999999987  999887 599999999997753

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.4e-09  Score=68.96  Aligned_cols=45  Identities=44%  Similarity=0.688  Sum_probs=28.1

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF   75 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~   75 (318)
                      |.++|+++++|.|.++.|++.|.....|..|+++|+++++|.|.+
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            445566666666652226666666666666666666666666644

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.67  E-value=8.9e-09  Score=67.45  Aligned_cols=38  Identities=26%  Similarity=0.428  Sum_probs=19.1

Q ss_pred             hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        34 ~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      +|+++++|.|..  |++.|.....|..|+++|+++++|.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            4 GSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccC
Confidence            344444555544  55555555555555555555555544

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=9e-09  Score=68.53  Aligned_cols=40  Identities=33%  Similarity=0.574  Sum_probs=19.1

Q ss_pred             hhhh-CCCcccCC--ccCcccccchhhhhhhhhhcCCCceecc
Q psy16882          5 LHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCT   44 (318)
Q Consensus         5 lrtH-g~k~f~C~--~Cgk~F~~~~~L~~H~~~H~~~kpy~C~   44 (318)
                      .++| ++++|.|.  .|++.|.+...|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444 44444444  4444444444444444444444444444

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=1.1e-08  Score=68.58  Aligned_cols=40  Identities=35%  Similarity=0.670  Sum_probs=30.5

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK   50 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk   50 (318)
                      ++++|.|.+|++.|.+...|..|+++|++++||.|.+  |++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            5677777777777777777777777777777777776  764

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=8.7e-09  Score=67.96  Aligned_cols=37  Identities=22%  Similarity=0.381  Sum_probs=18.9

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceeccc
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF   45 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~   45 (318)
                      ++++|.|.+|++.|.+...|..|+++|+++++|.|+.
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence            4445555555555555555555555555555555544

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=9.1e-09  Score=66.41  Aligned_cols=38  Identities=37%  Similarity=0.673  Sum_probs=22.6

Q ss_pred             hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        34 ~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      +|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            455555666655  66666666666666666666666555

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=9.3e-09  Score=68.25  Aligned_cols=39  Identities=28%  Similarity=0.353  Sum_probs=20.0

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      ++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         5 ~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            5 SSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            4455555555543  55555555555555555555554443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=8.9e-09  Score=67.91  Aligned_cols=39  Identities=31%  Similarity=0.538  Sum_probs=19.9

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      ++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         5 ~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            5 SSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCC
Confidence            3455555555543  55555555555555555555554443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.57  E-value=2.4e-08  Score=65.30  Aligned_cols=38  Identities=24%  Similarity=0.470  Sum_probs=20.9

Q ss_pred             hcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      +|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            4 GSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccC
Confidence            455555555544  55555555555555555555555443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3e-08  Score=63.90  Aligned_cols=35  Identities=43%  Similarity=0.788  Sum_probs=17.0

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCCceec
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC   43 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C   43 (318)
                      ++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            44444444444444444444444444444444443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.47  E-value=7.4e-08  Score=60.36  Aligned_cols=34  Identities=24%  Similarity=0.457  Sum_probs=19.7

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhcC
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      |+++| ++++|.|+.|++.|.+...|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            55555 55556666666666655566666555543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.40  E-value=1.6e-07  Score=58.83  Aligned_cols=35  Identities=34%  Similarity=0.658  Sum_probs=25.1

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      |+++|+++++|.|++  |++.|.+...|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhcc
Confidence            666777777777755  77777777777777777654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=8e-08  Score=60.20  Aligned_cols=31  Identities=29%  Similarity=0.442  Sum_probs=16.7

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCCC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEK   39 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~k   39 (318)
                      ++++|.|..|++.|.+...|..|+++|++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            6 SGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            4555555555555555555555555555443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.2e-07  Score=58.11  Aligned_cols=35  Identities=34%  Similarity=0.659  Sum_probs=27.4

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      ++|+++++|.|.+  |++.|.+...|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCC
Confidence            5677888888865  8888888888888888887765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=1.8e-07  Score=69.08  Aligned_cols=40  Identities=28%  Similarity=0.393  Sum_probs=25.3

Q ss_pred             cCCCCceeccCCCCCcccCChhHHHHHH-HHhccccccccc
Q psy16882         65 HTGDRPYVCPFDGCNKKFAQSTNLKSHI-LTHAKAKLLKGL  104 (318)
Q Consensus        65 H~gekpf~C~~~~C~k~F~~~~~L~~H~-r~H~~~k~~~c~  104 (318)
                      +++++||.|.+++|+++|.+.++|..|+ ++|++++||-|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            4566666665445677777666677775 466666666553

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.30  E-value=2.8e-07  Score=58.65  Aligned_cols=23  Identities=22%  Similarity=0.605  Sum_probs=9.3

Q ss_pred             CCcccCChhHHHHHHHHhccccc
Q psy16882         78 CNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        78 C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      |++.|.....|..|+++|+++++
T Consensus        12 C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A           12 CKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             TCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCcccCCHHHHHHHHHHcCCCcc
Confidence            44444444444444444443333

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=8e-07  Score=65.67  Aligned_cols=41  Identities=27%  Similarity=0.577  Sum_probs=37.4

Q ss_pred             hhcCCCceecccCCCCCcccchhhhhhhh-hhcCCCCceecc
Q psy16882         34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCP   74 (318)
Q Consensus        34 ~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~-r~H~gekpf~C~   74 (318)
                      .+++++||.|..++|+++|.....|..|+ ++|++++||-|.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            57889999998767999999999999998 689999999984

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.28  E-value=3.2e-07  Score=56.63  Aligned_cols=33  Identities=30%  Similarity=0.714  Sum_probs=16.0

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      |+++++|.|..  |++.|.....|..|+++|++++
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCC
Confidence            34444555544  5555555555555555544443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.27  E-value=3.2e-07  Score=61.25  Aligned_cols=40  Identities=33%  Similarity=0.612  Sum_probs=23.5

Q ss_pred             hhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         59 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        59 ~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      ..|...|+++++|.|.+..|++.|.+.+.|..|+++|+++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3444456666666664223666666666666666666554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.26  E-value=6e-07  Score=57.01  Aligned_cols=37  Identities=24%  Similarity=0.559  Sum_probs=34.1

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |+++++|.|..  |++.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            67889999998  99999999999999999999999976

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=6.7e-07  Score=56.27  Aligned_cols=37  Identities=24%  Similarity=0.639  Sum_probs=24.7

Q ss_pred             cCCCCceeccCCCCCcccCChhHHHHHHHHhcccccc
Q psy16882         65 HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLL  101 (318)
Q Consensus        65 H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~  101 (318)
                      |+++++|.|.++.|++.|.+...|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4566777775224777777777777777777766654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.25  E-value=3.9e-07  Score=56.05  Aligned_cols=32  Identities=28%  Similarity=0.447  Sum_probs=20.0

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCCCcee
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ   42 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~   42 (318)
                      +||.|++|++.|.+...|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35666666666666666666666666666553

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=3.3e-07  Score=70.35  Aligned_cols=40  Identities=20%  Similarity=0.404  Sum_probs=24.9

Q ss_pred             hhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882         62 VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG  103 (318)
Q Consensus        62 ~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c  103 (318)
                      .++|+++++|.|.+  |++.|.+...|..|+++|+++++|.|
T Consensus        17 ~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           17 NGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            34566666666654  66666666666666666666665544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.23  E-value=8.1e-07  Score=54.55  Aligned_cols=33  Identities=42%  Similarity=0.711  Sum_probs=22.9

Q ss_pred             cCCCCceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         65 HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        65 H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      |+++++|.|.+  |++.|.+...|..|+++|++++
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCC
Confidence            56667777755  7777777777777777776654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=4.4e-07  Score=57.15  Aligned_cols=36  Identities=36%  Similarity=0.726  Sum_probs=17.2

Q ss_pred             cCCCceecccCCCCCcccchhhhhhhhhhcCCCCce
Q psy16882         36 TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY   71 (318)
Q Consensus        36 ~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf   71 (318)
                      +++++|.|.++.|++.|.....|..|+++|+++++|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            344455554223555555555555555555544443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=9.6e-07  Score=57.23  Aligned_cols=34  Identities=24%  Similarity=0.495  Sum_probs=23.2

Q ss_pred             cCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         65 HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        65 H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      +++++||.|+++.|++.|.+...|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5567777775334777777777777777777654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=4.1e-07  Score=60.70  Aligned_cols=42  Identities=33%  Similarity=0.714  Sum_probs=29.0

Q ss_pred             hhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882         28 LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus        28 L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      +..|...|++++||.|.++.|++.|.....|..|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344555677777788853348888888888888877777653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.18  E-value=1e-06  Score=54.23  Aligned_cols=35  Identities=29%  Similarity=0.617  Sum_probs=31.5

Q ss_pred             hcCCCCceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882         64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL  100 (318)
Q Consensus        64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~  100 (318)
                      +|+++++|.|.+  |++.|.....|..|+++|+++++
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            478999999977  99999999999999999988753

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=8e-07  Score=55.57  Aligned_cols=30  Identities=33%  Similarity=0.595  Sum_probs=17.8

Q ss_pred             CCCcccCCccCcccccc-hhhhhhhhhhcCC
Q psy16882          9 GPRVHVCAECGKAFVES-SKLKRHQLVHTGE   38 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~-~~L~~H~~~H~~~   38 (318)
                      ++++|.|+.|++.|.+. ..|..|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            55566666666666665 5666666665543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.14  E-value=1.1e-06  Score=53.93  Aligned_cols=33  Identities=30%  Similarity=0.684  Sum_probs=16.2

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      |+++++|.|..  |++.|.....|..|+++|++++
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCC
Confidence            34444555544  5555555555555555554443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=1.1e-06  Score=56.85  Aligned_cols=32  Identities=22%  Similarity=0.599  Sum_probs=15.0

Q ss_pred             cCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         36 TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        36 ~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      ++++||.|..++|+++|..+..|..|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34444554422355555555555555544444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=7.5e-07  Score=56.05  Aligned_cols=31  Identities=23%  Similarity=0.435  Sum_probs=16.8

Q ss_pred             hh-CCCcccCCccCcccccchhhhhh-hhhhcC
Q psy16882          7 TH-GPRVHVCAECGKAFVESSKLKRH-QLVHTG   37 (318)
Q Consensus         7 tH-g~k~f~C~~Cgk~F~~~~~L~~H-~~~H~~   37 (318)
                      +| +++||+|+.|++.|.+...|..| +++|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            44 55555555555555555555555 455543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.11  E-value=4.3e-07  Score=55.40  Aligned_cols=30  Identities=23%  Similarity=0.398  Sum_probs=18.1

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCCCce
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGEKPF   41 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy   41 (318)
                      ||.|..|++.|.+...|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            556666666666666666666666655554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1e-06  Score=54.68  Aligned_cols=32  Identities=16%  Similarity=0.541  Sum_probs=16.4

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      |++++||.|..  |++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            44445555544  555555555555555555443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1.8e-06  Score=53.92  Aligned_cols=34  Identities=26%  Similarity=0.655  Sum_probs=25.8

Q ss_pred             hhcCCCCceeccCCCCCcccCCh-hHHHHHHHHhccc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQS-TNLKSHILTHAKA   98 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~-~~L~~H~r~H~~~   98 (318)
                      ++|+++++|.|.+  |++.|.+. ..|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCC
Confidence            4577778888865  88888887 7888888877764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.2e-06  Score=54.13  Aligned_cols=29  Identities=28%  Similarity=0.421  Sum_probs=14.4

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      ++++|.|..|++.|.....|..|+++|++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            44455555555555555555555544443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.1e-06  Score=54.47  Aligned_cols=31  Identities=29%  Similarity=0.626  Sum_probs=15.3

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      |++++||.|..  |++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSL--CEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSS--SSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCC--CCchhCCHHHHHHHHHHhcc
Confidence            44444555544  55555555555555555444

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.08  E-value=2.7e-06  Score=53.43  Aligned_cols=34  Identities=21%  Similarity=0.595  Sum_probs=24.4

Q ss_pred             cCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         65 HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        65 H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      |+++++|.|.+..|++.|.+.+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5677777775334788887777788887777664

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=2.4e-06  Score=52.95  Aligned_cols=34  Identities=24%  Similarity=0.586  Sum_probs=30.8

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      +.|.++++|.|.+  |++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCC--CCchhCCHHHHHHHHHHhccC
Confidence            3588999999977  999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=2.6e-06  Score=52.63  Aligned_cols=33  Identities=30%  Similarity=0.605  Sum_probs=24.5

Q ss_pred             hcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      +|.++++|.|.+  |++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            466777778865  888887777777787777654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.9e-06  Score=54.13  Aligned_cols=33  Identities=24%  Similarity=0.427  Sum_probs=24.0

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHH-HHHhcc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSH-ILTHAK   97 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H-~r~H~~   97 (318)
                      ++|++++||.|..  |++.|.....|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCC--CCcccCCHHHHHHHHHHHccC
Confidence            4677777777755  77777777777777 677764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=2e-06  Score=53.15  Aligned_cols=30  Identities=40%  Similarity=0.861  Sum_probs=15.9

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      ++++|.|.+|++.|.+...|..|+++|+++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            445555555555555555555555555443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.2e-06  Score=53.12  Aligned_cols=34  Identities=24%  Similarity=0.533  Sum_probs=30.7

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      +.|+++++|.|.+  |++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            3588999999977  999999999999999999865

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.01  E-value=4.1e-06  Score=51.30  Aligned_cols=30  Identities=33%  Similarity=0.613  Sum_probs=18.2

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhcccccc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHAKAKLL  101 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~  101 (318)
                      ||.|.+  |++.|.....|..|+++|+++++|
T Consensus         2 p~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPE--CPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSS--SCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            566644  666666666666666666665554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=4.6e-06  Score=51.45  Aligned_cols=33  Identities=33%  Similarity=0.607  Sum_probs=24.2

Q ss_pred             hcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      .|.++++|.|.+  |++.|.+...|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCC
Confidence            466777777755  777777777777777777654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.97  E-value=2.9e-06  Score=53.27  Aligned_cols=29  Identities=38%  Similarity=0.760  Sum_probs=13.9

Q ss_pred             CCCcccCCc--cCcccccchhhhhhhhhhcC
Q psy16882          9 GPRVHVCAE--CGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus         9 g~k~f~C~~--Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      ++++|.|.+  |++.|.+...|..|+++|++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            444455542  55555544455555444443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.95  E-value=6.4e-06  Score=50.95  Aligned_cols=33  Identities=24%  Similarity=0.623  Sum_probs=23.2

Q ss_pred             hcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      .|.++++|.|.+  |++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            355667777755  777777777777777777654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.92  E-value=1.4e-05  Score=57.70  Aligned_cols=55  Identities=22%  Similarity=0.571  Sum_probs=42.9

Q ss_pred             eecccCCCCCcccchhhhhhhh-hhcCCCC------ceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHV-RIHTGDR------PYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~-r~H~gek------pf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      +.|.+.+|++.|.+...|..|+ +.|.+.+      +|.|.+.+|++.+.....|..|+++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4677777888888888888887 4676654      78888778888888888888888764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.88  E-value=6.4e-06  Score=55.13  Aligned_cols=34  Identities=26%  Similarity=0.652  Sum_probs=22.3

Q ss_pred             hcCCCCceeccCCCCCcccCChhHHHHHHH-Hhcccc
Q psy16882         64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHIL-THAKAK   99 (318)
Q Consensus        64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r-~H~~~k   99 (318)
                      +|+++++|.|.+  |++.|.+...|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCC
Confidence            366777777755  7777777777777777 676554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.88  E-value=5.2e-06  Score=48.55  Aligned_cols=28  Identities=25%  Similarity=0.580  Sum_probs=16.5

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4556666666666666666666655543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.87  E-value=5.9e-06  Score=48.18  Aligned_cols=28  Identities=36%  Similarity=0.667  Sum_probs=17.9

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      ++|.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566666666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.86  E-value=2.7e-06  Score=51.68  Aligned_cols=31  Identities=26%  Similarity=0.369  Sum_probs=26.7

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCCCCce
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY   71 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf   71 (318)
                      +||.|..  |++.|.....|..|+++|+++++|
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCCC
Confidence            4788887  999999999999999999888876

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.84  E-value=7.5e-06  Score=47.64  Aligned_cols=27  Identities=44%  Similarity=0.758  Sum_probs=17.6

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCC
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      +|.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.83  E-value=9e-06  Score=50.26  Aligned_cols=31  Identities=39%  Similarity=0.847  Sum_probs=14.9

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      |.++++|.|..  |++.|.....|..|+++|++
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHHHhCC
Confidence            33444455544  55555555555555544444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.81  E-value=9.8e-06  Score=47.29  Aligned_cols=29  Identities=24%  Similarity=0.366  Sum_probs=19.6

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGEK   39 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~k   39 (318)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            35677777777777777777777766554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=9.1e-06  Score=47.05  Aligned_cols=28  Identities=32%  Similarity=0.703  Sum_probs=19.7

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677777777777777777777777654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.79  E-value=8.6e-06  Score=54.47  Aligned_cols=32  Identities=31%  Similarity=0.699  Sum_probs=16.7

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhh-hcCCC
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGD   68 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H~ge   68 (318)
                      |++++||.|.+  |++.|.....|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCC
Confidence            44555555554  5555555555555555 55544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.79  E-value=1.4e-05  Score=47.91  Aligned_cols=28  Identities=39%  Similarity=0.675  Sum_probs=17.1

Q ss_pred             CcccCC--ccCcccccchhhhhhhhhhcCC
Q psy16882         11 RVHVCA--ECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        11 k~f~C~--~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      ++|.|.  .|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456666  5666666666666666666544

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.78  E-value=4.3e-06  Score=53.56  Aligned_cols=24  Identities=42%  Similarity=0.775  Sum_probs=15.3

Q ss_pred             CCCcccCCccCcccccchhhhhhh
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQ   32 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~   32 (318)
                      +++||+|+.|+++|.+.+.|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            456666666666666666666665

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.77  E-value=8.4e-06  Score=47.32  Aligned_cols=28  Identities=50%  Similarity=0.885  Sum_probs=17.9

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3566666666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.75  E-value=9.2e-06  Score=47.09  Aligned_cols=26  Identities=38%  Similarity=0.686  Sum_probs=15.1

Q ss_pred             CcccCCccCcccccchhhhhhhhhhc
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      ++|.|+.|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45556666666666566666655554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.74  E-value=1.3e-05  Score=47.74  Aligned_cols=26  Identities=46%  Similarity=0.919  Sum_probs=13.3

Q ss_pred             cccCC--ccCcccccchhhhhhhhhhcC
Q psy16882         12 VHVCA--ECGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus        12 ~f~C~--~Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      ||.|+  .|++.|.+...|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            45554  455555555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.74  E-value=9.6e-06  Score=46.77  Aligned_cols=25  Identities=20%  Similarity=0.416  Sum_probs=15.6

Q ss_pred             CcccCCccCcccccchhhhhhhhhh
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVH   35 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H   35 (318)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4566666666666666666666555

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.92  E-value=4.2e-06  Score=49.02  Aligned_cols=28  Identities=46%  Similarity=0.765  Sum_probs=17.6

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3566666666666666666666666543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.91  E-value=4.4e-06  Score=49.08  Aligned_cols=28  Identities=39%  Similarity=0.841  Sum_probs=18.1

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566666666666666666666666543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.70  E-value=1.5e-05  Score=45.70  Aligned_cols=26  Identities=46%  Similarity=0.783  Sum_probs=15.6

Q ss_pred             cccCCccCcccccchhhhhhhhhhcC
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      +|.|..|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35666666666666666666666653

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.70  E-value=8.2e-06  Score=47.31  Aligned_cols=25  Identities=16%  Similarity=0.254  Sum_probs=15.2

Q ss_pred             CcccCCccCcccccchhhhhhhhhh
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVH   35 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H   35 (318)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666666555

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=2.8e-05  Score=45.24  Aligned_cols=28  Identities=32%  Similarity=0.837  Sum_probs=17.5

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      ++|.|.+  |++.|.....|..|+++|+++
T Consensus         2 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDY--CGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHHhccC
Confidence            4566644  666666666666666666543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.66  E-value=2.8e-05  Score=46.54  Aligned_cols=29  Identities=38%  Similarity=0.868  Sum_probs=15.5

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      +||.|.+..|++.|.+...|..|+++|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            45555411266666666666666655554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.63  E-value=3.8e-05  Score=44.46  Aligned_cols=28  Identities=36%  Similarity=0.835  Sum_probs=18.7

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      ++|.|.+  |++.|.....|..|+++|+++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            3567755  777777777777777776654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.63  E-value=2.4e-05  Score=45.81  Aligned_cols=27  Identities=37%  Similarity=0.754  Sum_probs=17.0

Q ss_pred             cccCCccCcccccchhhhhh-hhhhcCC
Q psy16882         12 VHVCAECGKAFVESSKLKRH-QLVHTGE   38 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H-~~~H~~~   38 (318)
                      +|.|..|++.|.+...|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4566544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.62  E-value=2.4e-05  Score=56.87  Aligned_cols=30  Identities=27%  Similarity=0.640  Sum_probs=20.7

Q ss_pred             CCCcccCCccCcccccchhhhhhhhhhcCC
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      +++||+|..|++.|.+...|..|+++|++.
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            566777777777777777777777777654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.61  E-value=3e-05  Score=44.99  Aligned_cols=27  Identities=41%  Similarity=0.846  Sum_probs=15.9

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      ||.|..  |++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPE--CPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSS--SSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCC--CCchhCCHHHHHHHHHHhcCC
Confidence            556644  666666666666666665543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.60  E-value=3.2e-05  Score=45.99  Aligned_cols=28  Identities=36%  Similarity=0.845  Sum_probs=13.1

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ||.|.+..|++.|.+...|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            4445311255555555555555555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.58  E-value=4.3e-05  Score=44.15  Aligned_cols=28  Identities=39%  Similarity=0.711  Sum_probs=19.6

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      ++|.|.+  |++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCC
Confidence            3677755  777777777777777777654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.73  E-value=9.9e-06  Score=46.28  Aligned_cols=25  Identities=48%  Similarity=0.833  Sum_probs=17.1

Q ss_pred             CcccCCccCcccccchhhhhhhhhh
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVH   35 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H   35 (318)
                      +||.|+.|++.|.+...|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3567777777777777777776665

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.57  E-value=5.1e-05  Score=44.06  Aligned_cols=29  Identities=38%  Similarity=0.748  Sum_probs=19.9

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      ++|.|.+  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHccCC
Confidence            3567755  7777777777777777776553

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=4.7e-05  Score=43.86  Aligned_cols=28  Identities=43%  Similarity=0.802  Sum_probs=19.5

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      ++|.|+.  |++.|.....|..|+++|+++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            4677755  777777777777777777654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.55  E-value=4.8e-05  Score=43.67  Aligned_cols=25  Identities=24%  Similarity=0.761  Sum_probs=17.4

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      ++|.|..  |++.|.....|..|+++|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSL--CPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHHC
T ss_pred             cCccCCC--cChhhCCHHHHHHHHHHc
Confidence            5677755  777777777777777665

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.53  E-value=4.2e-05  Score=48.82  Aligned_cols=26  Identities=19%  Similarity=0.464  Sum_probs=18.8

Q ss_pred             cCCCCceeccCCCCCcccCChhHHHHHH
Q psy16882         65 HTGDRPYVCPFDGCNKKFAQSTNLKSHI   92 (318)
Q Consensus        65 H~gekpf~C~~~~C~k~F~~~~~L~~H~   92 (318)
                      +.+++||.|..  |+++|.+.+.|.+|+
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC
Confidence            45677777754  777777777777776

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.52  E-value=4.2e-05  Score=44.17  Aligned_cols=26  Identities=35%  Similarity=0.911  Sum_probs=15.3

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      ++|.|.+  |++.|.....|..|+++|+
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSV--CGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSS--SCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHhcC
Confidence            4566644  6666666666666665554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.50  E-value=7.2e-05  Score=54.29  Aligned_cols=34  Identities=21%  Similarity=0.365  Sum_probs=27.6

Q ss_pred             hcCCCCceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      .|.+++||.|..  |++.|.+...|..|+++|++..
T Consensus         7 ~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc
Confidence            366788888865  8888888888888888888754

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.46  E-value=4.4e-05  Score=44.10  Aligned_cols=25  Identities=28%  Similarity=0.798  Sum_probs=16.1

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      +||.|.+  |++.|...+.|..|+++|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            5666654  666666666666666655

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.42  E-value=0.00012  Score=52.70  Aligned_cols=53  Identities=23%  Similarity=0.429  Sum_probs=46.4

Q ss_pred             ccCCc--cCcccccchhhhhhhh-hhcCCC------ceecccCCCCCcccchhhhhhhhhhc
Q psy16882         13 HVCAE--CGKAFVESSKLKRHQL-VHTGEK------PFQCTFEGCGKRFSLDFNLRTHVRIH   65 (318)
Q Consensus        13 f~C~~--Cgk~F~~~~~L~~H~~-~H~~~k------py~C~~~~Cgk~F~~~~~L~~H~r~H   65 (318)
                      |.|..  |++.|.+...|..|+. .|.+.+      +|.|.+.+|++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            56755  9999999999999984 787765      79999999999999999999999864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.54  E-value=2.1e-05  Score=45.99  Aligned_cols=27  Identities=37%  Similarity=0.902  Sum_probs=15.3

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ++|.|.+  |++.|.....|..|+++|++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIH--CQRQFADPGALQRHVRIHTG   28 (30)
Confidence            4555644  66666666566666555554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.53  E-value=2.2e-05  Score=45.81  Aligned_cols=26  Identities=35%  Similarity=0.779  Sum_probs=14.2

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ||.|.+  |++.|.....|..|+++|++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVM--CGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            455544  55555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.33  E-value=0.00011  Score=41.89  Aligned_cols=24  Identities=29%  Similarity=0.760  Sum_probs=11.6

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |.|.+  |++.|.+...|..|+++|+
T Consensus         2 ~~C~~--C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGL--CERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCC--CCCcCCCHHHHHHHHHHcC
Confidence            44433  5555555555555544443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.25  E-value=8.5e-05  Score=42.89  Aligned_cols=25  Identities=48%  Similarity=0.998  Sum_probs=13.5

Q ss_pred             cccCC--ccCcccccchhhhhhhhhhc
Q psy16882         12 VHVCA--ECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        12 ~f~C~--~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      +|.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  55555555555555555553

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.23  E-value=0.00016  Score=42.15  Aligned_cols=26  Identities=31%  Similarity=0.676  Sum_probs=12.5

Q ss_pred             ceeccCCCCCcccCChhHHHHH-HHHhcc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSH-ILTHAK   97 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H-~r~H~~   97 (318)
                      +|.|..  |++.|.+...|..| +++|.+
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGL--CNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTT--TCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcc--cCcccCChHHHHHHHHHHccC
Confidence            445533  55555555555555 344443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.25  E-value=5.8e-05  Score=42.88  Aligned_cols=24  Identities=54%  Similarity=1.063  Sum_probs=14.0

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      ||.|.+  |++.|.+...|..|+++|
T Consensus         2 p~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            455644  666666666666665554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.14  E-value=0.0002  Score=41.21  Aligned_cols=27  Identities=33%  Similarity=0.802  Sum_probs=15.3

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      +|.|.+..|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            456641136666666666666666554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.79  E-value=0.0025  Score=51.94  Aligned_cols=78  Identities=21%  Similarity=0.355  Sum_probs=53.8

Q ss_pred             CCcccCCccCcccccchhhhhhh--hhhcCC-Cceeccc----CCCCCcccchhhhhhhhhhcCCCCceeccCCCCCccc
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQ--LVHTGE-KPFQCTF----EGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF   82 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~--~~H~~~-kpy~C~~----~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F   82 (318)
                      .+++.|.+|+..|.+...+..|.  +.|... +.|.+..    +.=++.|..    ..+...+.+...|-|.+  |++.|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~C~~--C~~~f  103 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKA----APAEISDGEDRSKCCPV--CNMTF  103 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSC----CSSCCSSCCCTTTEETT--TTEEC
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCC----CccccccCCCCCeEcCC--CCCEe
Confidence            36788999999999999999998  466432 3343321    000222221    12334466778899988  99999


Q ss_pred             CChhHHHHHHH
Q psy16882         83 AQSTNLKSHIL   93 (318)
Q Consensus        83 ~~~~~L~~H~r   93 (318)
                      .+...|..|+.
T Consensus       104 ~s~~~~~~H~~  114 (127)
T 1zu1_A          104 SSPVVAESHYI  114 (127)
T ss_dssp             SSHHHHHHHHT
T ss_pred             CCHHHHHHHHC
Confidence            99999999984

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=93.25  E-value=0.019  Score=46.72  Aligned_cols=32  Identities=31%  Similarity=0.407  Sum_probs=27.9

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHH
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT   94 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~   94 (318)
                      +-..|+|+++|.|.+  |++.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            345688999999977  99999999999999865

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=91.47  E-value=0.045  Score=44.43  Aligned_cols=33  Identities=27%  Similarity=0.410  Sum_probs=28.3

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhc
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH   65 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H   65 (318)
                      +-..|+|+++|.|..  |++.|.+...|..|+++.
T Consensus        41 ~ded~tGekpfyC~~--C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLA--CARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEccc--CcchhCCHHHHHHHHhhh
Confidence            344688999999988  999999999999998753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.45  E-value=0.19  Score=33.69  Aligned_cols=23  Identities=22%  Similarity=0.548  Sum_probs=17.8

Q ss_pred             CcccCCccCcccccchhhhhhhh
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            56778888888877777887777

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=88.69  E-value=0.3  Score=40.85  Aligned_cols=84  Identities=20%  Similarity=0.324  Sum_probs=60.4

Q ss_pred             CCcccC--CccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhH
Q psy16882         10 PRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN   87 (318)
Q Consensus        10 ~k~f~C--~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~   87 (318)
                      .-...|  .-|+..+. ...|..|.. .-..++..|+.  |+..+ ....|..|+...-..+...|++  |+..|.. ..
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~--C~~~~-~r~~l~~H~~~~C~~r~~~C~~--C~~~~~~-~~  151 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQ--CQRPF-QKFHINIHILKDCPRRQVSCDN--CAASMAF-ED  151 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTT--TCCEE-EGGGHHHHHHHTCTTCEEECTT--TCCEEEG-GG
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCC--CChHH-HHHHHHHHhhhhCCCCCeECCC--CCCccCH-HH
Confidence            344567  46877664 456777863 33456789974  99887 6778999998777888999987  9998754 57


Q ss_pred             HHHHHHHhcccccc
Q psy16882         88 LKSHILTHAKAKLL  101 (318)
Q Consensus        88 L~~H~r~H~~~k~~  101 (318)
                      |..|..++.|..++
T Consensus       152 l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          152 KEIHDQNCPLALEH  165 (170)
T ss_dssp             HHHHHTTCCC----
T ss_pred             HHhHHHhCcChhhh
Confidence            89999998887654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=88.54  E-value=0.48  Score=39.57  Aligned_cols=90  Identities=22%  Similarity=0.397  Sum_probs=56.5

Q ss_pred             ccCCccCcccccchhhhhh-hhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHH
Q psy16882         13 HVCAECGKAFVESSKLKRH-QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH   91 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H-~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H   91 (318)
                      ..|+.|...+.....+..- +..........|+..+|+..+. ...|..|+. .-...+..|+  +|+..+ ....|..|
T Consensus        54 ~~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~--~C~~~~-~r~~l~~H  128 (170)
T 3hcs_A           54 HKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCP--QCQRPF-QKFHINIH  128 (170)
T ss_dssp             SBCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECT--TTCCEE-EGGGHHHH
T ss_pred             CCCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECC--CCChHH-HHHHHHHH
Confidence            3899999887654222111 1122224567887667987754 556778864 3345778996  599988 56678999


Q ss_pred             HHHhcccccccccccCCCch
Q psy16882         92 ILTHAKAKLLKGLFSLKMCP  111 (318)
Q Consensus        92 ~r~H~~~k~~~c~~~C~~C~  111 (318)
                      +...-..+..    .|..|+
T Consensus       129 ~~~~C~~r~~----~C~~C~  144 (170)
T 3hcs_A          129 ILKDCPRRQV----SCDNCA  144 (170)
T ss_dssp             HHHTCTTCEE----ECTTTC
T ss_pred             hhhhCCCCCe----ECCCCC
Confidence            8755444443    355565

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.34  E-value=1  Score=30.24  Aligned_cols=23  Identities=30%  Similarity=0.778  Sum_probs=18.5

Q ss_pred             CceeccCCCCCcccCChhHHHHHHH
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHIL   93 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r   93 (318)
                      .+|.|+  .|+..|.....|+.|++
T Consensus        11 ~~~~CP--rCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICP--RCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCT--TTCCCCSSHHHHHHHHH
T ss_pred             CceeCC--cccccccchHHHHhhhh
Confidence            568885  48888888888888887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	318
d1ubdc2	28	g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger	6e-12
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-10
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-09
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-10
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-09
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-07
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-08
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-08
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	8e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-08
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	4e-08
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	4e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	3e-08
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	7e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.003
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	2e-07
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	7e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-06
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	9e-06
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	4e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	8e-04
d1ubdc1	28	g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger	2e-04
d1tf3a2	30	g.37.1.1 (A:41-70) Transcription factor IIIA, TFII	7e-04

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 6e-12
 Identities = 28/28 (100%), Positives = 28/28 (100%)

Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGE 38
          RVHVCAECGKAFVESSKLKRHQLVHTGE
Sbjct: 1  RVHVCAECGKAFVESSKLKRHQLVHTGE 28

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (129), Expect = 1e-10
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 41 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF 75
          F C    CGK F+   +L+ H+++H+  R Y+C F
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (120), Expect = 2e-09
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTF 45
             CGK+F     LK H  +H+  + + C F
Sbjct: 6  EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 5e-04
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 71 YVCPFDGCNKKFAQSTNLKSHILTH 95
          + CP   C K F    +LK H+  H
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLH 26

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.4 bits (128), Expect = 2e-10
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 26 SKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
            + ++ +    +K F+C F GC K F   +N+R+H++ H  DR
Sbjct: 5  GSIDKY-VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (89), Expect = 3e-05
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 57 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 99
          ++  +V+    D+ + C F GC K F +  N++SHI TH + +
Sbjct: 6  SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 1  MRKHLHTHG--PRVHVCAECGKAFVESSKLKRHQLVHTGEK 39
          + K++          +   C K F     ++ H   H  ++
Sbjct: 7  IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (122), Expect = 1e-09
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
          +H+GEKP+ C    CGK FS    L  H R+HTG
Sbjct: 1  IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE 38
          H+ G + + C ECGKAF  SS L +HQ VHTGE
Sbjct: 2  HS-GEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          IH+G++PY C    C K F++S+ L  H   H
Sbjct: 1  IHSGEKPYGCVE--CGKAFSRSSILVQHQRVH 30

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (121), Expect = 1e-09
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 13 HVCAECGKAFVESSKLKRH-QLVHTGEKPFQC 43
          ++C  CGK F     L  H + VHT E+P +C
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 9e-09
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 36 TGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVC 73
          +  KP+ C    CGK FS   +L  H++ +HT +RP+ C
Sbjct: 1  SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (116), Expect = 6e-09
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 30 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
          R +      + ++C  + CGK FS   +L  H R HTG
Sbjct: 2  RSEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (96), Expect = 3e-06
 Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
                  R Y C   G    F+ S++L  H  TH
Sbjct: 3  SEWQQRERRRYKCDECGK--SFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (91), Expect = 2e-05
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 3  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE 38
          +        R + C ECGK+F  SS L +H+  HTGE
Sbjct: 2  RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.1 bits (115), Expect = 9e-09
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
          ++P+ C   GC K F  + +L  H + H  
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (102), Expect = 6e-07
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 68 DRPYVCPFDGCNKKFAQSTNLKSHILTHAK 97
          DRPY C   GC+K F ++ +L  H  +H +
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (86), Expect = 9e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 11 RVHVCAE--CGKAFVESSKLKRHQLVHTGE 38
          R + C    C KAFV +  L RH+  H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 1e-08
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
          +PF CT+  CGKRF+    L+ H R HTG++
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 10 PRVHVCAECGKAFVESSKLKRHQLVHTGEK 39
          P +   + CGK F  S +L+RH+  HTGEK
Sbjct: 2  PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          RP++C +  C K+F +S  L+ H  TH
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.3 bits (113), Expect = 2e-08
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
          +P+ C  E C +RFS   +L  H+RIHTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.6 bits (93), Expect = 8e-06
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          RPY CP + C+++F++S +L  HI  H
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (88), Expect = 4e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 11 RVHVCAE--CGKAFVESSKLKRHQLVHTG 37
          R + C    C + F  S+ L RH  +HTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 2e-08
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +K + C    CGK F+       H+ +H G RPY C    C KKF    +L  H+  H
Sbjct: 1  DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 5e-08
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 17 ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 65
          +CGK+F   S+  RH  +H G +P+ C    CGK+F +  +L  H++IH
Sbjct: 7  QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.003
 Identities = 10/30 (33%), Positives = 12/30 (40%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVH 35
             G R + C  CGK F     L  H  +H
Sbjct: 24 MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 2e-08
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHT 66
          +P+ C F+GC K+F+   NL++H+  H 
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (110), Expect = 4e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTHA 96
          RPYVCPFDGCNKKFAQSTNLKSHILTHA
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 4e-04
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 11 RVHVCAE--CGKAFVESSKLKRHQLVHT 36
          R +VC    C K F +S+ LK H L H 
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (112), Expect = 3e-08
 Identities = 18/30 (60%), Positives = 23/30 (76%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          KP +CTFEGC K +S   NL+TH+R HTG+
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%)

Query: 13 HVCAE--CGKAFVESSKLKRHQLVHTGE 38
          H C    C K++     LK H   HTGE
Sbjct: 3  HKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 1e-05
 Identities = 11/27 (40%), Positives = 20/27 (74%)

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +P+ C F+GC K +++  NLK+H+ +H
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 45.3 bits (108), Expect = 7e-08
 Identities = 13/27 (48%), Positives = 14/27 (51%)

Query: 13 HVCAECGKAFVESSKLKRHQLVHTGEK 39
           VC  C +AF     LKRH   HT EK
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 40.7 bits (96), Expect = 4e-06
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
          + F C    C + F+   +L+ H R HT ++
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 32.6 bits (75), Expect = 0.003
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          R +VC    C + FA+  +LK H  +H
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSH 25

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.1 bits (107), Expect = 1e-07
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
            R  TG +P+ CP     + F++S +L  H   H
Sbjct: 2  STRGSTGIKPFQCPDCD--RSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (104), Expect = 4e-07
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
               TG KPFQC    C + FS   +L  H + H  
Sbjct: 2  STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.001
 Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 1/35 (2%)

Query: 4  HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG 37
                G +   C +C ++F  S  L  H+  H  
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (106), Expect = 1e-07
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
           HTGEKP+ C+   C K F     L  H + +  
Sbjct: 2  THTGEKPYACSH--CDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 9e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          R HTG++PY C    C+K F Q   L  H   +
Sbjct: 1  RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 9e-06
 Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEK 39
          HT G + + C+ C K F +   L  H   +    
Sbjct: 3  HT-GEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 30/30 (100%), Positives = 30/30 (100%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 6e-05
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 11 RVHVCAE--CGKAFVESSKLKRHQLVHTGE 38
          +   C    CGK F     L+ H  +HTG+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 7e-05
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 69 RPYVCPFDGCNKKFAQSTNLKSHILTH 95
          +P+ C F+GC K+F+   NL++H+  H
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (105), Expect = 3e-07
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGD 68
           H+GEKP++C    C  RF+    ++ H+ + HT +
Sbjct: 2  THSGEKPYECYI--CHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (104), Expect = 3e-07
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
          R H+G++PY C    C+ +F QS  +K HIL  
Sbjct: 1  RTHSGEKPYECYI--CHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEK 39
          H+ G + + C  C   F +S  +K H L    E 
Sbjct: 3  HS-GEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (102), Expect = 5e-07
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
           +G++PF C    C   F+   N   H+++HT 
Sbjct: 2  SSGKRPFVCRI--CLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 2/31 (6%)

Query: 65 HTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 95
           +G RP+VC    C   F    N   H+  H
Sbjct: 2  SSGKRPFVCRI--CLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 6  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE 38
           + G R  VC  C  AF   +   RH  VHT  
Sbjct: 2  SS-GKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 1e-06
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 13 HVCAECGKAFVESSKLKRHQLVHTGEK 39
            C EC K F+ S  L +H   H  +K
Sbjct: 3  FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69
          K F C    C KRF    +L  H++ H   +
Sbjct: 1  KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67
          +KPFQC    C + FS   +L TH+R HTG
Sbjct: 1  QKPFQCRI--CMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.7 bits (96), Expect = 4e-06
 Identities = 9/25 (36%), Positives = 10/25 (40%)

Query: 13 HVCAECGKAFVESSKLKRHQLVHTG 37
            C  C + F  S  L  H   HTG
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTG 28

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 9e-06
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPF 41
          +   C  CGK F +   L RH+L H+GEKP+
Sbjct: 4  KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 4e-05
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 13 HVCAECGKAFVESSKLKRHQLVHT 36
          + C ECGKAF ++S L  HQ +HT
Sbjct: 3  YKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 8e-04
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHT 66
          KP++C    CGK FS +  L  H RIHT
Sbjct: 1  KPYKC--LECGKAFSQNSGLINHQRIHT 26

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 2e-04
 Identities = 15/16 (93%), Positives = 16/16 (100%)

Query: 303 TIACPHKGCSKMFRDN 318
           TIACPHKGC+KMFRDN
Sbjct: 1   TIACPHKGCTKMFRDN 16

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

 Score = 34.3 bits (78), Expect = 7e-04
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 68
          KPF C  EGC K F+   +L  H   HTG+
Sbjct: 1  KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	318
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.43
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.36
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.23
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.93
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.89
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.86
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.84
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.83
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.78
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.78
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.77
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.77
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.72
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.71
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.69
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.68
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.66
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.63
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.62
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.61
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.59
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.57
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.57
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.56
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.55
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.54
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.54
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.53
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.51
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.47
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.47
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.41
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.4
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.4
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.34
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.31
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.29
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.29
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.08
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.92
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.64
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.58
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.57
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.41
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.39
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.35
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.34
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.32
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.18
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.16
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.15
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.11
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.06
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.05
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.03
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.99
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.91
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.83
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.83
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.77
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.42
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.34
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.33
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.28
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.07
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.03
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.96
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.93
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.63
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.59
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.52
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.52
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.43
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.3
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.04
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.99
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.83
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.82
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.79
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.78
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.6
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.36
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.02
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.95
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.83
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.64
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.61
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.38
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.32
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.0
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.82
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.65
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.61
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.97
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	88.57
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	87.18
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	87.18
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	86.78
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	86.31
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	85.27
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	84.23
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	83.35
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	82.94
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	81.3
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	80.96
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	80.36

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3e-14  Score=98.40  Aligned_cols=52  Identities=38%  Similarity=0.916  Sum_probs=26.9

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhc
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH   65 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H   65 (318)
                      +||+|+ ||+.|.....|..|+++|++++||.|..  |+++|.....|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            455552 5555555555555555555555555544  555555555555555444

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.7e-13  Score=94.52  Aligned_cols=53  Identities=38%  Similarity=0.781  Sum_probs=50.4

Q ss_pred             CCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      ++||.| .  ||+.|.....|..|+++|++++||.|.+  |++.|...+.|..|+++|
T Consensus         1 EK~y~C-~--Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-C--CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            589999 4  9999999999999999999999999976  999999999999999887

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=5.1e-13  Score=76.76  Aligned_cols=16  Identities=94%  Similarity=1.757  Sum_probs=15.4

Q ss_pred             ccccCCCCccccccCC
Q psy16882        303 TIACPHKGCSKMFRDN  318 (318)
Q Consensus       303 ~~~~~~~~~~~~~~~~  318 (318)
                      |||||||||+||||||
T Consensus         1 ti~CphkgC~K~Frd~   16 (28)
T d1ubdc1           1 TIACPHKGCTKMFRDN   16 (28)
T ss_dssp             CEECCSTTCCCEESSH
T ss_pred             CccCCcccHHHHhhch
Confidence            7999999999999997

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.3e-10  Score=74.38  Aligned_cols=36  Identities=33%  Similarity=0.685  Sum_probs=18.5

Q ss_pred             hhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         31 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        31 H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      |+++|++++||.|..  ||++|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            445555555555544  555555555555555555543

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=2.3e-10  Score=73.49  Aligned_cols=35  Identities=37%  Similarity=0.822  Sum_probs=17.4

Q ss_pred             CCcccCCccCcccccchhhhhhhh-hhcCCCceecc
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCT   44 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~-~H~~~kpy~C~   44 (318)
                      ++||+|..||+.|.+..+|.+|++ +|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            345555555555555555555543 45555555543

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=3.7e-10  Score=72.21  Aligned_cols=37  Identities=30%  Similarity=0.495  Sum_probs=34.9

Q ss_pred             hhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         60 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        60 ~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      +|+++|++++||.|..  |+++|...++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            6899999999999976  999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=4.8e-10  Score=75.00  Aligned_cols=41  Identities=34%  Similarity=0.714  Sum_probs=22.0

Q ss_pred             hhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         57 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        57 ~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      .|..|++ |++++||.|.+++|++.|.+.++|..|+++|+++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            3444443 5555555555445555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.83  E-value=4.3e-10  Score=75.25  Aligned_cols=44  Identities=32%  Similarity=0.727  Sum_probs=37.5

Q ss_pred             chhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882         25 SSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus        25 ~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      +..|..|+. |++++||.|.+++|+++|...++|..|+++|+|++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456777775 99999999988889999999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.4e-09  Score=69.79  Aligned_cols=35  Identities=43%  Similarity=0.900  Sum_probs=23.2

Q ss_pred             CCceecccCCCCCcccchhhhhhhhh-hcCCCCceecc
Q psy16882         38 EKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCP   74 (318)
Q Consensus        38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H~gekpf~C~   74 (318)
                      ++||+|..  ||++|....+|..|++ +|++++||.|.
T Consensus         3 ~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            56677765  7777777777777754 56777777664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=8.5e-10  Score=69.59  Aligned_cols=33  Identities=36%  Similarity=0.989  Sum_probs=16.6

Q ss_pred             eecccCCCCCcccchhhhhhhhhhcCCCCceec
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   73 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C   73 (318)
                      |.|++++|+++|.++..|.+|+++|+|++||.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            444444455555555555555555555555544

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=1.3e-09  Score=69.28  Aligned_cols=33  Identities=24%  Similarity=0.515  Sum_probs=18.3

Q ss_pred             chhhh-CCCcccCCccCcccccchhhhhhhhhhc
Q psy16882          4 HLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus         4 HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      |.|+| |++||+|++|+++|.+++.|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            44555 5555555555555555555555555553

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=1.5e-09  Score=68.89  Aligned_cols=35  Identities=34%  Similarity=0.658  Sum_probs=27.9

Q ss_pred             hhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      |.|+|+|++||.|.+  |++.|.+.++|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            677888888888865  88888888888888887753

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.7e-09  Score=66.61  Aligned_cols=34  Identities=38%  Similarity=0.791  Sum_probs=27.1

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      |+|+|++||.|.+  |+++|.+.+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            5688888888865  888888888888888888754

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4e-09  Score=65.11  Aligned_cols=33  Identities=39%  Similarity=0.773  Sum_probs=22.3

Q ss_pred             hcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      +|+|++||.|..  |+++|...+.|..|+++|+++
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            366777777754  777777777777777777653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=4.8e-09  Score=66.06  Aligned_cols=35  Identities=29%  Similarity=0.565  Sum_probs=32.9

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhcccccccccc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLF  105 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~  105 (318)
                      |.|++++|+++|.+...|++|+++|++++||.|.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            88998899999999999999999999999998864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3e-09  Score=67.07  Aligned_cols=32  Identities=38%  Similarity=0.720  Sum_probs=15.7

Q ss_pred             hhcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        34 ~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      +|++++||.|..  |+++|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSH--CDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSS--SSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCC--CCCCcCCHhHHHHhCcccCC
Confidence            444555555544  55555555555555554443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=4.7e-09  Score=64.77  Aligned_cols=33  Identities=52%  Similarity=0.989  Sum_probs=19.5

Q ss_pred             hhcCCCceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         34 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        34 ~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      +|++++||.|..  |+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            355666666654  666666666666666666553

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=9.8e-09  Score=64.62  Aligned_cols=33  Identities=42%  Similarity=0.928  Sum_probs=27.1

Q ss_pred             hhcCCCCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         63 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        63 r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      |+|+|++||.|++  |++.|++.++|..|++.+++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccC
Confidence            5788999999977  99999999999999765544

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.62  E-value=6.1e-09  Score=62.41  Aligned_cols=28  Identities=46%  Similarity=0.787  Sum_probs=17.1

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      +||.|++|++.|.+.+.|.+|+++|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4566666666666666666666666655

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.7e-09  Score=62.67  Aligned_cols=29  Identities=52%  Similarity=1.012  Sum_probs=14.8

Q ss_pred             ceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         40 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        40 py~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      ||.|++++|+++|...++|..|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            45554444555555555555555555544

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=1.1e-08  Score=63.86  Aligned_cols=31  Identities=32%  Similarity=0.783  Sum_probs=22.5

Q ss_pred             cCCCCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         65 HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        65 H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      |+|++||.|.+  |++.|.+.++|.+|+++|+.
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCC
Confidence            56777777766  77777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.3e-08  Score=61.93  Aligned_cols=31  Identities=39%  Similarity=0.848  Sum_probs=29.1

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      +||.|++++|+++|.+.++|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899998899999999999999999999875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.57  E-value=7.5e-09  Score=61.43  Aligned_cols=28  Identities=32%  Similarity=0.576  Sum_probs=18.3

Q ss_pred             CCcccCCccCcccccchhhhhhhhhhcC
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      ++||+|++|++.|.+.+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4566666666666666666666666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.4e-08  Score=60.82  Aligned_cols=29  Identities=34%  Similarity=0.699  Sum_probs=20.3

Q ss_pred             CcccCCccCcccccchhhhhhhhhhcCCC
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHTGEK   39 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~k   39 (318)
                      +||.|++|++.|.+.+.|.+|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777653

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.9e-08  Score=60.64  Aligned_cols=29  Identities=38%  Similarity=1.013  Sum_probs=18.2

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      |||.|++++|+++|.+.++|.+|+++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            45666666666666666666666666655

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.4e-08  Score=60.13  Aligned_cols=29  Identities=38%  Similarity=0.930  Sum_probs=16.3

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      |||.|++++|+++|.+.++|.+|+++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            35555555555555555555555555554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.6e-08  Score=60.94  Aligned_cols=30  Identities=60%  Similarity=1.061  Sum_probs=22.1

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      +||.|.+++|+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            467777777777777777777777777764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=1.2e-08  Score=61.50  Aligned_cols=30  Identities=100%  Similarity=1.724  Sum_probs=22.8

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      +||.|.+++|+++|...++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            477777777777777777777777777765

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1.6e-08  Score=63.55  Aligned_cols=27  Identities=37%  Similarity=0.629  Sum_probs=13.9

Q ss_pred             hh-CCCcccCCccCcccccchhhhhhhh
Q psy16882          7 TH-GPRVHVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus         7 tH-g~k~f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      +| |++||+|++|++.|.+..+|+.|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcc
Confidence            44 5555555555555555555555543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=3.3e-08  Score=58.60  Aligned_cols=28  Identities=36%  Similarity=0.876  Sum_probs=21.1

Q ss_pred             CCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         68 DRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        68 ekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ||||.|.+  |++.|.+.++|..|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            57777865  88888888888888777764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.47  E-value=3.3e-08  Score=61.69  Aligned_cols=31  Identities=32%  Similarity=0.784  Sum_probs=16.2

Q ss_pred             hcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         35 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        35 H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      |+|++||+|.+  |++.|..+.+|..|+++|+.
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCC
Confidence            34555555554  55555555555555555543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.47  E-value=4.1e-08  Score=58.68  Aligned_cols=28  Identities=36%  Similarity=0.835  Sum_probs=16.7

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      +||.|++  |++.|.+.+.|.+|+++|+++
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCC
Confidence            3566644  666666666666666666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=7.1e-08  Score=57.61  Aligned_cols=29  Identities=41%  Similarity=0.852  Sum_probs=19.4

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcccc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK   99 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k   99 (318)
                      |||.|.+  |++.|.+.++|.+|+++|++++
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            4667755  7777777777777777776653

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=5.7e-08  Score=57.99  Aligned_cols=29  Identities=41%  Similarity=1.066  Sum_probs=17.3

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      |||.|.+++|+++|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            45666655666666666666666666553

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.40  E-value=7.7e-08  Score=58.73  Aligned_cols=30  Identities=40%  Similarity=0.892  Sum_probs=18.9

Q ss_pred             CCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         68 DRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        68 ekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      |+||.|.+++|++.|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            456666666666666666666666666653

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=5.8e-08  Score=57.94  Aligned_cols=29  Identities=48%  Similarity=1.077  Sum_probs=23.7

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      +||.|.+++|+++|....+|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            57888888888888888888888888865

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=9.1e-08  Score=56.53  Aligned_cols=27  Identities=100%  Similarity=1.665  Sum_probs=15.1

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      +||.|++++|+++|.+.++|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            355555555555555555555555555

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.31  E-value=1.6e-07  Score=57.32  Aligned_cols=30  Identities=30%  Similarity=0.776  Sum_probs=21.3

Q ss_pred             CCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         38 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      ++||.|.+++|+++|....+|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            467777777777777777777777777754

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=8.4e-08  Score=55.63  Aligned_cols=26  Identities=50%  Similarity=0.828  Sum_probs=17.3

Q ss_pred             CcccCCccCcccccchhhhhhhhhhc
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      +||+|..||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46666666666666666666666663

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.2e-07  Score=56.05  Aligned_cols=28  Identities=39%  Similarity=1.062  Sum_probs=21.6

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      +||.|.+++|+++|....+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4777877778888888888888887774

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=8.6e-07  Score=51.25  Aligned_cols=26  Identities=38%  Similarity=0.778  Sum_probs=19.1

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |||+|..  ||+.|.+.+.|..|+++|+
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCCC
Confidence            5777744  7777777777777777774

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.8e-06  Score=48.10  Aligned_cols=26  Identities=50%  Similarity=0.884  Sum_probs=19.1

Q ss_pred             cccCCccCcccccchhhhhhhhhhcC
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      |++|++|++.|.++..|+.||+.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45777777777777777777777764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.7e-05  Score=46.06  Aligned_cols=28  Identities=36%  Similarity=0.965  Sum_probs=19.9

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      +||.|.+.+|+++|..+++|+.|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677777777777777777777777654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.58  E-value=1.2e-05  Score=46.01  Aligned_cols=27  Identities=33%  Similarity=0.717  Sum_probs=18.3

Q ss_pred             CCcccCCccCcccccchhhhhhhhhhc
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      ++||.|.+||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            466777777777777777777766663

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.57  E-value=2.7e-05  Score=44.42  Aligned_cols=27  Identities=44%  Similarity=1.013  Sum_probs=22.1

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      .||.|+.++|++.|+.++.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            478888888888888888888888877

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.41  E-value=4.2e-05  Score=43.75  Aligned_cols=27  Identities=37%  Similarity=0.865  Sum_probs=19.4

Q ss_pred             CCceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         68 DRPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        68 ekpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |+||.|.+  ||+.|.+.....+|.++|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            46777765  7777777777777777764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=4.9e-05  Score=44.16  Aligned_cols=29  Identities=28%  Similarity=0.863  Sum_probs=23.2

Q ss_pred             CCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         68 DRPYVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        68 ekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      ++||.|++  |+..|.+.+.+..|.+.|.+.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            57888877  888888888888888888653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=3.1e-05  Score=46.05  Aligned_cols=29  Identities=38%  Similarity=0.881  Sum_probs=16.6

Q ss_pred             eecccCCCCCcccchhhhhhhhhhcCCCCce
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY   71 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf   71 (318)
                      ..|..  ||+.|.....|.+|...|++++||
T Consensus         6 ~~ce~--cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEI--CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETT--TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHH--HHHHHHHHHHHHhhhcccCCCCCC
Confidence            44544  566665555666665555555555

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=4.8e-05  Score=42.19  Aligned_cols=24  Identities=50%  Similarity=0.898  Sum_probs=12.1

Q ss_pred             eecccCCCCCcccchhhhhhhhhhcC
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      ++|.+  |++.|+++..|..|+|.|+
T Consensus         2 hkc~~--c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEV--CGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTT--TTBCCCCHHHHHHHGGGCC
T ss_pred             Cccch--hhhHhcchhHHHHHhhccC
Confidence            34444  5555555555555555554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=5.3e-05  Score=43.89  Aligned_cols=29  Identities=41%  Similarity=0.885  Sum_probs=23.6

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      +||.|.+++|++++...+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            57888888888888888888888887654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=9.3e-05  Score=43.93  Aligned_cols=30  Identities=47%  Similarity=0.943  Sum_probs=19.4

Q ss_pred             cccCCccCcccccchhhhhhhhhhcCCCce
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHTGEKPF   41 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy   41 (318)
                      ...|..||+.|.....|.+|...|++++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345666666666666666666666666665

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.16  E-value=8.5e-05  Score=42.31  Aligned_cols=27  Identities=48%  Similarity=1.059  Sum_probs=23.9

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhc
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIH   65 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H   65 (318)
                      .||.|+.++|++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589999889999999999999998877

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=6.2e-05  Score=43.73  Aligned_cols=28  Identities=25%  Similarity=0.554  Sum_probs=16.9

Q ss_pred             CCcccCCccCcccccchhhhhhhhhhcC
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      ++||.|++|+..|.++..+.-|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00011  Score=41.70  Aligned_cols=28  Identities=29%  Similarity=0.681  Sum_probs=17.9

Q ss_pred             CCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         68 DRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        68 ekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ++||+|.+  |...-...++|..|++.|++
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeee--cccccCCchheEEeeecccC
Confidence            35666665  66666666666666666654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00013  Score=42.62  Aligned_cols=26  Identities=38%  Similarity=0.947  Sum_probs=13.4

Q ss_pred             ceeccCCCCCcccCChhHHHHHH-HHh
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHI-LTH   95 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~-r~H   95 (318)
                      ||.|.+++|.+.|++.+....|+ ++|
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CccccCCChhhhhcchhhhhhhccccc
Confidence            45555555555555555555554 444

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00011  Score=42.87  Aligned_cols=30  Identities=40%  Similarity=0.808  Sum_probs=27.0

Q ss_pred             CceecccCCCCCcccchhhhhhhh-hhcCCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHV-RIHTGD   68 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~-r~H~ge   68 (318)
                      +||.|.+++|.|.|...+....|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            689999999999999999999997 888643

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00013  Score=41.20  Aligned_cols=25  Identities=100%  Similarity=1.535  Sum_probs=13.8

Q ss_pred             ccCCccCcccccchhhhhhhhhhcC
Q psy16882         13 HVCAECGKAFVESSKLKRHQLVHTG   37 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~H~~   37 (318)
                      +.|..||+.|...+.|++|..+|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3455555555555555555555554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.99  E-value=0.00014  Score=41.61  Aligned_cols=28  Identities=39%  Similarity=0.814  Sum_probs=13.7

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ||.|.+++|.+.|.+.-.|.+|.-+|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            4444444455555555555555444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.91  E-value=0.00031  Score=40.15  Aligned_cols=30  Identities=47%  Similarity=0.839  Sum_probs=28.1

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      +||.|..++|.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            589999999999999999999999999875

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00045  Score=42.45  Aligned_cols=30  Identities=30%  Similarity=0.819  Sum_probs=23.1

Q ss_pred             CCCceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         67 GDRPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        67 gekpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      .++||.|.+++|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            367888877788888888888888877664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00028  Score=40.15  Aligned_cols=26  Identities=38%  Similarity=0.620  Sum_probs=16.4

Q ss_pred             ccCCccCcccccchhhhhhhhhhcCC
Q psy16882         13 HVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      |.|+.|+.....++-|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56666666666666666666666654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00037  Score=39.49  Aligned_cols=27  Identities=37%  Similarity=0.747  Sum_probs=17.1

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   67 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g   67 (318)
                      +||+|+.  |.+.-...+.|..|+|.|+|
T Consensus         2 rpfkcql--csy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQI--CPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHTTCCS
T ss_pred             Ccceeee--cccccCCchheEEeeecccC
Confidence            5666665  66666666666666666655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.42  E-value=0.00071  Score=38.48  Aligned_cols=29  Identities=34%  Similarity=0.705  Sum_probs=22.5

Q ss_pred             CCcccCCccCcccccchhhhhhhhhhcCC
Q psy16882         10 PRVHVCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      +..|.|..|...|.++-.|+-||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45678888888888888888888888764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.00085  Score=41.17  Aligned_cols=30  Identities=43%  Similarity=0.867  Sum_probs=25.3

Q ss_pred             CCCceecccCCCCCcccchhhhhhhhhhcC
Q psy16882         37 GEKPFQCTFEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus        37 ~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      .++||.|..++|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            478899988889999999999988887773

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.33  E-value=0.00089  Score=37.19  Aligned_cols=25  Identities=44%  Similarity=0.727  Sum_probs=13.8

Q ss_pred             cCCccCcccccchhhhhhhhhhcCC
Q psy16882         14 VCAECGKAFVESSKLKRHQLVHTGE   38 (318)
Q Consensus        14 ~C~~Cgk~F~~~~~L~~H~~~H~~~   38 (318)
                      .|+.|.++|.++..|+.|-+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0013  Score=37.01  Aligned_cols=26  Identities=38%  Similarity=0.752  Sum_probs=17.0

Q ss_pred             eecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      +.|..  ||++|...+.|++|..+|+|+
T Consensus         3 hvc~e--cgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAE--CGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTT--TCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHH--HhHHHHHHHHHHHHhhcccCC
Confidence            45654  777777777777777666654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.0024  Score=36.22  Aligned_cols=26  Identities=35%  Similarity=0.690  Sum_probs=16.5

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~~~   98 (318)
                      |.|++  |+.....++-|..|+++|+++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCC
Confidence            55654  666666666666666666654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.03  E-value=0.0013  Score=40.43  Aligned_cols=25  Identities=28%  Similarity=0.505  Sum_probs=12.6

Q ss_pred             cccCCccCcccccchhhhhhhhhhc
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      .|+|.+|++.|.+-..|--||+.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            3455555555555555555555443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.96  E-value=0.0017  Score=36.00  Aligned_cols=26  Identities=38%  Similarity=0.867  Sum_probs=15.6

Q ss_pred             ecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882         42 QCTFEGCGKRFSLDFNLRTHVRIHTGDR   69 (318)
Q Consensus        42 ~C~~~~Cgk~F~~~~~L~~H~r~H~gek   69 (318)
                      +|+.  |.+.|.++..|+.|-|.|+|++
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCCC
Confidence            3554  6666666666666666666653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.93  E-value=0.0018  Score=35.33  Aligned_cols=23  Identities=52%  Similarity=0.875  Sum_probs=12.5

Q ss_pred             ccCCccCcccccchhhhhhhhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQLVH   35 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~~H   35 (318)
                      |+|..|.++|..++.|.+|.++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            44555555555555555555554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0024  Score=38.22  Aligned_cols=29  Identities=38%  Similarity=0.904  Sum_probs=17.4

Q ss_pred             ceecccCCCC---CcccchhhhhhhhhhcCCC
Q psy16882         40 PFQCTFEGCG---KRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        40 py~C~~~~Cg---k~F~~~~~L~~H~r~H~ge   68 (318)
                      .|.|.+.+|.   +.|.....|..|+|+|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            3556666664   3466666666666666654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.0019  Score=36.69  Aligned_cols=22  Identities=23%  Similarity=0.445  Sum_probs=14.8

Q ss_pred             cccCCccCcccccchhhhhhhh
Q psy16882         12 VHVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      ||.|..|+..|.++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            4666666666666666666665

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0045  Score=34.61  Aligned_cols=26  Identities=35%  Similarity=0.768  Sum_probs=19.9

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      +||+|.+  |...-...+.|+.|+++|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            5778866  8887777888888887774

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0049  Score=38.30  Aligned_cols=27  Identities=33%  Similarity=0.817  Sum_probs=23.4

Q ss_pred             CCCCceeccCCCCCcccCChhHHHHHHHH
Q psy16882         66 TGDRPYVCPFDGCNKKFAQSTNLKSHILT   94 (318)
Q Consensus        66 ~gekpf~C~~~~C~k~F~~~~~L~~H~r~   94 (318)
                      +|-+||.|.+  |++.|.+++.+.+|...
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhhh
Confidence            4779999976  99999999999999754

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.43  E-value=0.0036  Score=34.17  Aligned_cols=23  Identities=30%  Similarity=0.798  Sum_probs=12.2

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHh
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      |+|.+  |.++|...+.|.+|+++|
T Consensus         1 ykcgl--cersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGT
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhh
Confidence            34544  555555555555555554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.0073  Score=34.36  Aligned_cols=25  Identities=44%  Similarity=0.866  Sum_probs=16.7

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHh
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTH   95 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H   95 (318)
                      +||.|.+  |.......++|..|+++-
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHH
T ss_pred             CCccccc--cccccccchhhhhhhhcc
Confidence            4667766  777666777777776653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.04  E-value=0.0069  Score=37.13  Aligned_cols=25  Identities=32%  Similarity=0.865  Sum_probs=12.0

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      .|.|.+  |++.|.+...|--|++.|.
T Consensus         5 ~~~C~~--C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSF--CKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCC--CCCccCCcccccchHhhhc
Confidence            344544  5555555445555544443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.99  E-value=0.01  Score=33.51  Aligned_cols=28  Identities=21%  Similarity=0.749  Sum_probs=19.6

Q ss_pred             CCceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         68 DRPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        68 ekpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      +..|.|.+  |...|.++-.|+.|+-.|++
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccC
Confidence            34577766  77777777777777777765

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.0083  Score=33.53  Aligned_cols=26  Identities=35%  Similarity=0.737  Sum_probs=16.1

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      +||+|..  |.+.-...+.|..|+|+|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            4566655  6666666666666666653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.82  E-value=0.0048  Score=35.79  Aligned_cols=25  Identities=32%  Similarity=0.632  Sum_probs=15.1

Q ss_pred             cccCCccCcccccchhhhhhhh-hhc
Q psy16882         12 VHVCAECGKAFVESSKLKRHQL-VHT   36 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~-~H~   36 (318)
                      ||.|.+|++.|.++.-|.+|.. .|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            4666666666666666666653 443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.0052  Score=38.18  Aligned_cols=25  Identities=28%  Similarity=0.522  Sum_probs=19.1

Q ss_pred             CCCcccCCccCcccccchhhhhhhh
Q psy16882          9 GPRVHVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus         9 g~k~f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      |.+||.|..|++.|..+.++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4678888888888888887777754

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.0085  Score=34.08  Aligned_cols=22  Identities=32%  Similarity=0.394  Sum_probs=10.5

Q ss_pred             cccCCccCcccccchhhhhhhh
Q psy16882         12 VHVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      ||.|..|.......++|+.|++
T Consensus         2 py~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhh
Confidence            4444444444444444444444

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.60  E-value=0.0078  Score=34.88  Aligned_cols=26  Identities=35%  Similarity=0.765  Sum_probs=19.4

Q ss_pred             ceeccCCCCCcccCChhHHHHHHH-Hhcc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHIL-THAK   97 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r-~H~~   97 (318)
                      ||.|.+  |++.|++++-|.+|.+ .|.+
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcC
Confidence            678876  8888888888888874 4543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.013  Score=32.86  Aligned_cols=26  Identities=35%  Similarity=0.899  Sum_probs=22.0

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      ..|+..+|++.|...+.++.|+.+|.
T Consensus         2 i~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           2 IACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             ccCCcccHHHHhhchHHHHHHhhccC
Confidence            45887889999999999999988874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.02  E-value=0.016  Score=32.70  Aligned_cols=23  Identities=39%  Similarity=0.922  Sum_probs=14.4

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHH
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILT   94 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~   94 (318)
                      ||.|.+  |+..|.+..+|..|++.
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHS
T ss_pred             Ccccce--eeeeEeeccchhHhhhh
Confidence            466655  66666666666666653

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.95  E-value=0.015  Score=33.49  Aligned_cols=28  Identities=25%  Similarity=0.752  Sum_probs=16.0

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      .|.|.+++|+..|.....|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            4555555555555555555555555554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.019  Score=34.17  Aligned_cols=30  Identities=27%  Similarity=0.681  Sum_probs=25.0

Q ss_pred             CceeccCCCCCc---ccCChhHHHHHHHHhccc
Q psy16882         69 RPYVCPFDGCNK---KFAQSTNLKSHILTHAKA   98 (318)
Q Consensus        69 kpf~C~~~~C~k---~F~~~~~L~~H~r~H~~~   98 (318)
                      +.|.|.+.+|.+   .|.....|..|+++|+++
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            357888888864   588999999999999975

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.014  Score=33.04  Aligned_cols=24  Identities=25%  Similarity=0.378  Sum_probs=18.2

Q ss_pred             CcccCCccCcccccchhhhhhhhh
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLV   34 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~   34 (318)
                      +||+|+.|..-..+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            577888888777777888888763

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.61  E-value=0.027  Score=31.16  Aligned_cols=26  Identities=42%  Similarity=0.972  Sum_probs=15.6

Q ss_pred             eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |.|-+++|++.|.....|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            44555566666666666666665553

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.38  E-value=0.015  Score=33.47  Aligned_cols=30  Identities=33%  Similarity=0.917  Sum_probs=25.6

Q ss_pred             CceecccCCCCCcccchhhhhhhhhhcCCC
Q psy16882         39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   68 (318)
Q Consensus        39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge   68 (318)
                      +.|.|..++|+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            468898888999999999999998888875

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.32  E-value=0.035  Score=31.26  Aligned_cols=23  Identities=30%  Similarity=0.668  Sum_probs=19.5

Q ss_pred             eccCCCCCcccCChhHHHHHHHH
Q psy16882         72 VCPFDGCNKKFAQSTNLKSHILT   94 (318)
Q Consensus        72 ~C~~~~C~k~F~~~~~L~~H~r~   94 (318)
                      .|.+++|++.|+++..|+.|.+-
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            47778999999999999988764

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.00  E-value=0.019  Score=31.83  Aligned_cols=26  Identities=42%  Similarity=0.823  Sum_probs=21.7

Q ss_pred             eecccCCCCCcccchhhhhhhhhhcC
Q psy16882         41 FQCTFEGCGKRFSLDFNLRTHVRIHT   66 (318)
Q Consensus        41 y~C~~~~Cgk~F~~~~~L~~H~r~H~   66 (318)
                      |.|..++|++.|..-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            67888889999988888888887774

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.82  E-value=0.041  Score=31.10  Aligned_cols=26  Identities=31%  Similarity=0.726  Sum_probs=20.0

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      +||+|.+  |..--.++++|..|++.-+
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHH
T ss_pred             CCcccce--ecccccCcchHHHHHHHHc
Confidence            4788877  8888888888888876543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.65  E-value=0.019  Score=31.17  Aligned_cols=22  Identities=23%  Similarity=0.673  Sum_probs=16.7

Q ss_pred             cccCCccCcccccchhhhhhhh
Q psy16882         12 VHVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      ||+|.-|...|.++..|+.||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6777777777777777777764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.61  E-value=0.023  Score=31.59  Aligned_cols=22  Identities=27%  Similarity=0.705  Sum_probs=15.1

Q ss_pred             cccCCccCcccccchhhhhhhh
Q psy16882         12 VHVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      ||+|..||+.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5677777777777777776654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.97  E-value=0.033  Score=32.94  Aligned_cols=25  Identities=32%  Similarity=0.711  Sum_probs=19.8

Q ss_pred             cccCCccCcccccchhhhhhhhhhc
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      .|.|..|+++|.++..+.+|-..-.
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            5889999999998888888865433

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.57  E-value=0.18  Score=27.27  Aligned_cols=22  Identities=41%  Similarity=1.034  Sum_probs=16.7

Q ss_pred             eeccCCCCCcccCChhHHHHHHHH
Q psy16882         71 YVCPFDGCNKKFAQSTNLKSHILT   94 (318)
Q Consensus        71 f~C~~~~C~k~F~~~~~L~~H~r~   94 (318)
                      |.|++  |-+.|.+..++..|.++
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            66777  88888888888777764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.18  E-value=0.12  Score=32.96  Aligned_cols=26  Identities=31%  Similarity=0.788  Sum_probs=21.7

Q ss_pred             CcccCCccCcccccchhhhhhhhhhc
Q psy16882         11 RVHVCAECGKAFVESSKLKRHQLVHT   36 (318)
Q Consensus        11 k~f~C~~Cgk~F~~~~~L~~H~~~H~   36 (318)
                      -.|.|..|++.|.....|+.|..-|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35789999999999999999987774

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.18  E-value=0.16  Score=28.25  Aligned_cols=22  Identities=27%  Similarity=0.659  Sum_probs=10.8

Q ss_pred             cCCccCcccccchhhhhhhhhh
Q psy16882         14 VCAECGKAFVESSKLKRHQLVH   35 (318)
Q Consensus        14 ~C~~Cgk~F~~~~~L~~H~~~H   35 (318)
                      +|+.|..+..++..|+.|.++|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4455554444445555454444

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.78  E-value=0.12  Score=28.02  Aligned_cols=21  Identities=24%  Similarity=0.428  Sum_probs=15.5

Q ss_pred             ccCCccCcccccchhhhhhhh
Q psy16882         13 HVCAECGKAFVESSKLKRHQL   33 (318)
Q Consensus        13 f~C~~Cgk~F~~~~~L~~H~~   33 (318)
                      |.|+.|-+.|.++.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            667777777777777777765

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.31  E-value=0.17  Score=27.31  Aligned_cols=15  Identities=40%  Similarity=0.955  Sum_probs=7.4

Q ss_pred             CCcccCChhHHHHHH
Q psy16882         78 CNKKFAQSTNLKSHI   92 (318)
Q Consensus        78 C~k~F~~~~~L~~H~   92 (318)
                      |...|.....|..|+
T Consensus         8 csqqfmqkkdlqshm   22 (26)
T d2dlqa1           8 CSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SCCEESSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            555555555554443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.27  E-value=0.28  Score=31.15  Aligned_cols=27  Identities=26%  Similarity=0.545  Sum_probs=23.1

Q ss_pred             CceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         69 RPYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      ..|.|-+  |+|.|.....|++|...|.-
T Consensus         5 ~l~pCG~--CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGL--CGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTT--TCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccc--cccccCCHHHHhHhHHhcCc
Confidence            3588977  99999999999999987753

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.23  E-value=0.25  Score=27.64  Aligned_cols=23  Identities=39%  Similarity=0.797  Sum_probs=19.5

Q ss_pred             ecccCCCCCcccchhhhhhhhhh
Q psy16882         42 QCTFEGCGKRFSLDFNLRTHVRI   64 (318)
Q Consensus        42 ~C~~~~Cgk~F~~~~~L~~H~r~   64 (318)
                      .|..++|++.|++...|..|.+-
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            57888999999999999888763

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.35  E-value=0.49  Score=25.98  Aligned_cols=22  Identities=32%  Similarity=0.684  Sum_probs=15.5

Q ss_pred             ceeccCCCCCcccCChhHHHHHHH
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHIL   93 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r   93 (318)
                      ||+|  .+||+.|-+..+|..|..
T Consensus         1 pf~c--~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFEC--PKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBC--TTTCCBCSSHHHHHHHHH
T ss_pred             CCcc--ccchhhhhhHhHHHHHHH
Confidence            5777  348877777777777753

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.94  E-value=0.37  Score=26.65  Aligned_cols=25  Identities=24%  Similarity=0.501  Sum_probs=16.0

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHA   96 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~   96 (318)
                      |-+|+  .|.++.++...|+.|.++|-
T Consensus         2 pekc~--ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCS--ECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHGGGC
T ss_pred             CccCc--ccccccCcHHHHHHhhcccc
Confidence            44663  37777777777777766663

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.30  E-value=0.52  Score=27.58  Aligned_cols=26  Identities=27%  Similarity=0.625  Sum_probs=20.0

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHHhcc
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILTHAK   97 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~   97 (318)
                      .|.|  .+|++.|.++..+.+|.....+
T Consensus         4 afvc--skcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVC--SKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEEC--SSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeee--cccccchhcchHHHHHhhhcCC
Confidence            4788  4588888888888888766554

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.96  E-value=0.65  Score=25.57  Aligned_cols=23  Identities=26%  Similarity=0.738  Sum_probs=18.0

Q ss_pred             ceeccCCCCCcccCChhHHHHHHHH
Q psy16882         70 PYVCPFDGCNKKFAQSTNLKSHILT   94 (318)
Q Consensus        70 pf~C~~~~C~k~F~~~~~L~~H~r~   94 (318)
                      .|.||.  |+-...+++.|+.|++.
T Consensus         2 k~qcph--c~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPH--CDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHH
T ss_pred             CccCCc--chhheeehhhhhHHhhh
Confidence            377876  88888888888888764

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.36  E-value=0.52  Score=26.36  Aligned_cols=23  Identities=26%  Similarity=0.629  Sum_probs=15.2

Q ss_pred             cccCCccCcccccchhhhhhhhh
Q psy16882         12 VHVCAECGKAFVESSKLKRHQLV   34 (318)
Q Consensus        12 ~f~C~~Cgk~F~~~~~L~~H~~~   34 (318)
                      .|.|.+|++...+...++-|...
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            36677777777776666666553