Psyllid ID: psy16903

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-
MAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLVENSPFSVITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTRSLPKTQTGKSRCET
cccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEcccHHHHHHHccccccccccccccHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccHHHcccccccHHHHHccccccccccccccccccccccccccccccc
cccccEccccccccHHHHHHHHHHHHHHHHHHHcHHHHcHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccEEEEcccccEEEEEcccHHHEEEEccccccccHcccHHccccccEEEcccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcccHHHHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHccHHHHHHHHcccccccccccccEEEEccccEEEEccccc
mamgieinaqrdsksDYVRAVYEISELTIVRslrpwlwhplvfkwtkygrrynqcLSVLHGFTNKVIKERKQLLEEKkniggdkpdttededlvenspfsvitptfhFKILDVFVDVFVEKCQILVDKlgdkcdgkafdvypFITRCAMDIicgakwhshrkmitptfhFKILDVFVDVFVEKCQILVDKlgdkcdgkafdtamgieinaqrdsksDYVRAVYEISELTIVRslrpwlwhplvfkwtkygrrynqcLSVLHGFTNKVIKERKQLLEEKkniggdkpdttededlgkKKRMAFLDLLLEASehastpltdveIREEVDtfmfeghdtttaGICWSLfllgshphyqdkVCAELDTifaedpdrkitmrdlNDMKYLERVIKEDLIPTIRTKYALnwtrslpktqtgksrcet
mamgieinaqrdsksdyVRAVYEISELtivrslrpwlwHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLeekkniggdkpdttededLVENSPFSVITPTFHFKILDVFVDVFVEKCQILVdklgdkcdgkAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMgieinaqrdsksdyVRAVYEISELtivrslrpwlwHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLeekkniggdkpdttededlgkKKRMAFLDLLLEasehastpltdveiREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIfaedpdrkitmrdlndmkylervikedliptirtkyalnwtrslpktqtgksrcet
MAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLVENSPFSVITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTRSLPKTQTGKSRCET
***************DYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKE****************************PFSVITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKE******************************AFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTR**************
MAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLVENSPFSVITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQ************************KRMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTRSLPKTQTGKSRCET
MAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLVENSPFSVITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTRSLP***********
****IEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLVENSPFSVITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTRSLPKTQTGKSRC**
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MAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLVENSPFSVITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTRSLPKTQTGKSRCET
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query421 2.2.26 [Sep-21-2011]
P29981 511 Cytochrome P450 4C1 OS=Bl N/A N/A 0.555 0.457 0.653 5e-87
Q9VA27 535 Cytochrome P450 4c3 OS=Dr yes N/A 0.558 0.439 0.474 1e-57
Q964T1 501 Cytochrome P450 4c21 OS=B N/A N/A 0.555 0.467 0.476 1e-55
Q6ZWL3 525 Cytochrome P450 4V2 OS=Ho yes N/A 0.558 0.447 0.462 2e-52
Q9DBW0 525 Cytochrome P450 4V2 OS=Mu yes N/A 0.553 0.443 0.455 1e-50
Q5RCN6 525 Cytochrome P450 4V2 OS=Po yes N/A 0.548 0.44 0.455 2e-50
A2RRT9 525 Cytochrome P450 4V2 OS=Ra yes N/A 0.555 0.445 0.445 1e-49
Q27589 501 Cytochrome P450 4d2 OS=Dr no N/A 0.558 0.469 0.402 8e-49
O46051 507 Probable cytochrome P450 no N/A 0.565 0.469 0.410 8e-47
Q9VS79 463 Cytochrome P450 4d8 OS=Dr no N/A 0.558 0.507 0.420 7e-46
>sp|P29981|CP4C1_BLADI Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP4C1 PE=2 SV=1 Back     alignment and function desciption
 Score =  322 bits (824), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 168/257 (65%), Positives = 195/257 (75%), Gaps = 23/257 (8%)

Query: 154 GAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFD------------ 201
           GAKWHSHRKMITPTFHFKILD+FVDVFVEK +ILV KL  K  GK FD            
Sbjct: 124 GAKWHSHRKMITPTFHFKILDIFVDVFVEKSEILVKKLQSKVGGKDFDIYPFITHCALDI 183

Query: 202 ---TAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLS 258
              TAMGI++NAQ +S+S+YV+AVYEISELT+ RS+RPWL   ++F  T  G+RY +CL 
Sbjct: 184 ICETAMGIQMNAQEESESEYVKAVYEISELTMQRSVRPWLHPKVIFDLTTMGKRYAECLR 243

Query: 259 VLHGFTNKVIKERKQLLEEKKNIGGDKPDTT--EDEDLGKKKRMAFLDLLLEASEHASTP 316
           +LHGFTNKVI+ERK L    + + G KP  +  EDE LGKKKR+AFLDLLLEASE+  T 
Sbjct: 244 ILHGFTNKVIQERKSL----RQMTGMKPTISNEEDELLGKKKRLAFLDLLLEASENG-TK 298

Query: 317 LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITM 376
           ++D +IREEVDTFMFEGHDTT+AGICW+LFLLGSHP  QDKV  ELD IF +  DR  TM
Sbjct: 299 MSDTDIREEVDTFMFEGHDTTSAGICWALFLLGSHPEIQDKVYEELDHIF-QGSDRSTTM 357

Query: 377 RDLNDMKYLERVIKEDL 393
           RDL DMKYLERVIKE L
Sbjct: 358 RDLADMKYLERVIKESL 374
Involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.
Blaberus discoidalis (taxid: 6981)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 4EC: .EC: 1
>sp|Q9VA27|CP4C3_DROME Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1 Back     alignment and function description
>sp|Q964T1|CP4CU_BLAGE Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZWL3|CP4V2_HUMAN Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=2 Back     alignment and function description
>sp|Q9DBW0|CP4V2_MOUSE Cytochrome P450 4V2 OS=Mus musculus GN=Cyp4v2 PE=1 SV=1 Back     alignment and function description
>sp|Q5RCN6|CP4V2_PONAB Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2 SV=1 Back     alignment and function description
>sp|A2RRT9|CP4V2_RAT Cytochrome P450 4V2 OS=Rattus norvegicus GN=Cyp4v2 PE=2 SV=1 Back     alignment and function description
>sp|Q27589|CP4D2_DROME Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2 Back     alignment and function description
>sp|O46051|C4D14_DROME Probable cytochrome P450 4d14 OS=Drosophila melanogaster GN=Cyp4d14 PE=3 SV=1 Back     alignment and function description
>sp|Q9VS79|CP4D8_DROME Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query421
399631520510 cytochrome P450 [Bemisia tabaci] 0.558 0.460 0.647 7e-86
339896241509 cytochrome P450 [Bemisia tabaci] 0.558 0.461 0.643 1e-85
231885511 RecName: Full=Cytochrome P450 4C1; AltNa 0.555 0.457 0.653 3e-85
408724215520 cytochrome P450 CYP4C62 [Laodelphax stri 0.553 0.448 0.632 4e-79
189178726520 cytochrome P450 [Nilaparvata lugens] 0.555 0.45 0.635 6e-79
157131909509 cytochrome P450 [Aedes aegypti] gi|10887 0.562 0.465 0.503 1e-62
290792623515 cytochrome P450 [Litopenaeus vannamei] 0.558 0.456 0.515 1e-60
408724293385 cytochrome P450 CYP4C71v2, partial [Laod 0.558 0.610 0.492 3e-60
408724277398 cytochrome P450 CYP4C71v2, partial [Laod 0.558 0.590 0.492 4e-60
321476772451 hypothetical protein DAPPUDRAFT_192258 [ 0.555 0.518 0.494 3e-59
>gi|399631520|gb|AFP49818.1| cytochrome P450 [Bemisia tabaci] Back     alignment and taxonomy information
 Score =  323 bits (829), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 167/258 (64%), Positives = 196/258 (75%), Gaps = 23/258 (8%)

Query: 155 AKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFD------------- 201
           AKWHSHRKMITPTFHFKILD+F +VFVEKCQ+LV+KL  K + + FD             
Sbjct: 125 AKWHSHRKMITPTFHFKILDIFQEVFVEKCQLLVEKLKSKANNEPFDIYPFITRCALDII 184

Query: 202 --TAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSV 259
             TAMG EINAQ  + SDYVRA+Y+ISELT+ RS +PW W  LVF  T YG+RY++CLSV
Sbjct: 185 CETAMGTEINAQEKTDSDYVRAIYDISELTLKRSFQPWFWPDLVFNMTDYGKRYSECLSV 244

Query: 260 LHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDED---LGKKKRMAFLDLLLEASEHAS-T 315
           LHGFT +VIKERK L   + +  G   + T DED   LGKKKR+AFLDLLLEASE+++ +
Sbjct: 245 LHGFTTRVIKERKAL---RSSSNGKHIEQTVDEDAELLGKKKRLAFLDLLLEASENSNGS 301

Query: 316 PLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKIT 375
            LTD+EIREEVDTFMFEGHDTTTAGICW+LFLLGSHP YQDKV  EL+ IF  D +R  T
Sbjct: 302 ALTDIEIREEVDTFMFEGHDTTTAGICWTLFLLGSHPEYQDKVAEELNNIFQGD-NRLAT 360

Query: 376 MRDLNDMKYLERVIKEDL 393
           M+DLNDMKYLER IK+ L
Sbjct: 361 MKDLNDMKYLERCIKDSL 378

Source: Bemisia tabaci

Species: Bemisia tabaci

Genus: Bemisia

Family: Aleyrodidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|339896241|gb|AEK21806.1| cytochrome P450 [Bemisia tabaci] Back     alignment and taxonomy information
>gi|231885|sp|P29981.1|CP4C1_BLADI RecName: Full=Cytochrome P450 4C1; AltName: Full=CYPIVC1 gi|155947|gb|AAA27819.1| cytochrome P450 [Blaberus discoidalis] Back     alignment and taxonomy information
>gi|408724215|gb|AFU86425.1| cytochrome P450 CYP4C62 [Laodelphax striatella] Back     alignment and taxonomy information
>gi|189178726|emb|CAQ57675.1| cytochrome P450 [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|157131909|ref|XP_001655966.1| cytochrome P450 [Aedes aegypti] gi|108871345|gb|EAT35570.1| AAEL012266-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|290792623|gb|ADD63783.1| cytochrome P450 [Litopenaeus vannamei] Back     alignment and taxonomy information
>gi|408724293|gb|AFU86464.1| cytochrome P450 CYP4C71v2, partial [Laodelphax striatella] Back     alignment and taxonomy information
>gi|408724277|gb|AFU86456.1| cytochrome P450 CYP4C71v2, partial [Laodelphax striatella] Back     alignment and taxonomy information
>gi|321476772|gb|EFX87732.1| hypothetical protein DAPPUDRAFT_192258 [Daphnia pulex] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query421
FB|FBgn0015032 535 Cyp4c3 "Cytochrome P450-4c3" [ 0.558 0.439 0.474 7.8e-55
UNIPROTKB|E1BYW5 530 CYP4V2 "Uncharacterized protei 0.565 0.449 0.470 1.5e-51
UNIPROTKB|F1N3Z7 527 CYP4V2 "Uncharacterized protei 0.591 0.472 0.459 4e-51
UNIPROTKB|F1PNR5 523 CYP4V2 "Uncharacterized protei 0.555 0.447 0.464 3.6e-50
UNIPROTKB|Q6ZWL3 525 CYP4V2 "Cytochrome P450 4V2" [ 0.558 0.447 0.462 2.5e-49
UNIPROTKB|Q5RCN6 525 CYP4V2 "Cytochrome P450 4V2" [ 0.548 0.44 0.455 1.2e-47
MGI|MGI:2142763 525 Cyp4v3 "cytochrome P450, famil 0.558 0.447 0.454 1.6e-47
RGD|708530 525 Cyp4v3 "cytochrome P450, famil 0.555 0.445 0.445 6.9e-47
FB|FBgn0011576 501 Cyp4d2 "Cytochrome P450-4d2" [ 0.555 0.467 0.403 8.8e-47
ZFIN|ZDB-GENE-061103-88 510 cyp4v7 "cytochrome P450, famil 0.546 0.450 0.415 1.4e-46
FB|FBgn0015032 Cyp4c3 "Cytochrome P450-4c3" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 122/257 (47%), Positives = 164/257 (63%)

Query:   156 KWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAF--------------- 200
             KWHS RK++TP FHFKILD F+DVF E+  +L  KL  +   +AF               
Sbjct:   150 KWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVGSEAFNLFPYVTLCTLDIVC 209

Query:   201 DTAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVL 260
             +TAMG  I AQ +S+S+YV+AVY I  +   R  + WL    +F  T   + +   ++ L
Sbjct:   210 ETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTL 269

Query:   261 HGFTNKVIKERKQ----LLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTP 316
             HGF+N VI+ERK     L E   N   + PD  +D  +GKKKR+AFLDLL++AS+   T 
Sbjct:   270 HGFSNMVIRERKAELAILQENNNNNNNNAPDAYDD--VGKKKRLAFLDLLIDASKEG-TV 326

Query:   317 LTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITM 376
             L++ +IREEVDTFMFEGHDTT+A I W+LFLLG HP YQ++V  ELD+IF +D +   TM
Sbjct:   327 LSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATM 386

Query:   377 RDLNDMKYLERVIKEDL 393
             ++L DM+YLE  IK+ L
Sbjct:   387 KNLMDMRYLECCIKDSL 403
GO:0043231 "intracellular membrane-bounded organelle" evidence=NAS
GO:0009055 "electron carrier activity" evidence=IEA;NAS
GO:0016020 "membrane" evidence=NAS
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0005506 "iron ion binding" evidence=IEA
UNIPROTKB|E1BYW5 CYP4V2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N3Z7 CYP4V2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PNR5 CYP4V2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q6ZWL3 CYP4V2 "Cytochrome P450 4V2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5RCN6 CYP4V2 "Cytochrome P450 4V2" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
MGI|MGI:2142763 Cyp4v3 "cytochrome P450, family 4, subfamily v, polypeptide 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|708530 Cyp4v3 "cytochrome P450, family 4, subfamily v, polypeptide 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0011576 Cyp4d2 "Cytochrome P450-4d2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061103-88 cyp4v7 "cytochrome P450, family 4, subfamily V, polypeptide 7" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
pfam00067461 pfam00067, p450, Cytochrome P450 1e-49
PLN02936 489 PLN02936, PLN02936, epsilon-ring hydroxylase 1e-14
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 3e-14
PLN02738 633 PLN02738, PLN02738, carotene beta-ring hydroxylase 1e-12
PLN02302 490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 2e-12
PLN02290 516 PLN02290, PLN02290, cytokinin trans-hydroxylase 1e-08
PLN03195 516 PLN03195, PLN03195, fatty acid omega-hydroxylase; 1e-07
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 3e-07
pfam00067461 pfam00067, p450, Cytochrome P450 6e-07
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 9e-07
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 1e-06
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 2e-06
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 3e-06
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 1e-04
PLN02774463 PLN02774, PLN02774, brassinosteroid-6-oxidase 3e-04
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 8e-04
PLN02169 500 PLN02169, PLN02169, fatty acid (omega-1)-hydroxyla 0.001
PLN02196 463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 0.004
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information 
 Score =  174 bits (443), Expect = 1e-49
 Identities = 73/276 (26%), Positives = 114/276 (41%), Gaps = 43/276 (15%)

Query: 153 CGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKA------------- 199
            G +W   R+ +TPTF       F     E+ + LV+KL                     
Sbjct: 91  NGPRWRQLRRFLTPTFTSFGKLSFEPRVEEEARDLVEKLRKTAGEPGVIDITDLLFRAAL 150

Query: 200 ---FDTAMGIEINAQRDSK-SDYVRAVYEISELTIVRSLRPWLWHPLV-FKWTKYGRRYN 254
                   G    +  D K  + V+AV E+S L    S +     P++ +    +GR+  
Sbjct: 151 NVICSILFGERFGSLEDPKFLELVKAVQELSSLLSSPSPQLLDLFPILKYFPGPHGRKLK 210

Query: 255 QCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHAS 314
           +    +    +K+I+ER++ L                 D  KK    FLD LL A E   
Sbjct: 211 RARKKIKDLLDKLIEERRETL-----------------DSAKKSPRDFLDALLLAKEEED 253

Query: 315 -TPLTDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRK 373
            + LTD E+R  V    F G DTT++ + W+L+ L  HP  Q+K+  E+D +  +   R 
Sbjct: 254 GSKLTDEELRATVLELFFAGTDTTSSTLSWALYELAKHPEVQEKLREEIDEVIGD--KRS 311

Query: 374 ITMRDLNDMKYLERVIKE-----DLIPTIRTKYALN 404
            T  DL +M YL+ VIKE      ++P +  +    
Sbjct: 312 PTYDDLQNMPYLDAVIKETLRLHPVVPLLLPREVTK 347

Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures. Length = 461
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 421
KOG0158|consensus 499 100.0
KOG0156|consensus 489 100.0
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PLN03195 516 fatty acid omega-hydroxylase; Provisional 100.0
PLN02290 516 cytokinin trans-hydroxylase 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
KOG0157|consensus 497 100.0
PLN02738 633 carotene beta-ring hydroxylase 100.0
PLN02183 516 ferulate 5-hydroxylase 100.0
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 100.0
PTZ00404 482 cytochrome P450; Provisional 100.0
PLN02936 489 epsilon-ring hydroxylase 100.0
PLN02966 502 cytochrome P450 83A1 100.0
PLN03112 514 cytochrome P450 family protein; Provisional 100.0
PLN00168 519 Cytochrome P450; Provisional 100.0
PLN02394 503 trans-cinnamate 4-monooxygenase 100.0
KOG0159|consensus 519 100.0
PLN02426 502 cytochrome P450, family 94, subfamily C protein 100.0
PLN02500 490 cytochrome P450 90B1 100.0
PLN02774463 brassinosteroid-6-oxidase 100.0
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 100.0
PLN02655 466 ent-kaurene oxidase 100.0
PLN03018 534 homomethionine N-hydroxylase 100.0
PLN02196463 abscisic acid 8'-hydroxylase 100.0
PLN02302 490 ent-kaurenoic acid oxidase 100.0
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.97
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.94
PLN02648 480 allene oxide synthase 99.94
KOG0684|consensus 486 99.9
KOG0157|consensus497 90.82
>KOG0158|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.3e-46  Score=345.62  Aligned_cols=328  Identities=22%  Similarity=0.320  Sum_probs=246.2

Q ss_pred             hcChhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccccccccCcccccccchhhhhhhhhHHHHHHHHH
Q psy16903         44 KWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLVENSPFSVITPTFHFKILDVFVDVFVEKCQ  123 (421)
Q Consensus        44 ~~t~~~~~~~~~~~pl~g~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~v~v~~~~~~~~i~~~~~~  123 (421)
                      ||.++|.++.++ +|+.|+...+.+.+.. .....+.|..+      ++++|  .+.+..|.++|.||+++++|++++++
T Consensus        27 yw~rrGi~~~~p-~p~~Gn~~~~~~~~~~-~~~~~~~~~~~------~~~~G--~y~~~~p~l~v~D~elik~I~ik~F~   96 (499)
T KOG0158|consen   27 YWRRRGIPGPKP-LPFLGNLPGMLKRERP-GDLLLDIYTKY------RPVVG--IYEGRQPALLVSDPELIKEILIKDFD   96 (499)
T ss_pred             hhccCCCCCCCC-CCcEecHHHHHhccCc-HHHHHHHHhcC------CCEEE--EEecCCcceEecCHHHHHHHHHHhCc
Confidence            578889998888 6899999998876544 32322333332      35555  99999999999999999999999999


Q ss_pred             HHhhhcccccCCCccccccccccccccccCchhhHHhhhhhCCcCchhhhhHhHHHHHHHHHHHHHHHhhccC----Ccc
Q psy16903        124 ILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCD----GKA  199 (421)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~~~~~l~~~~~----~~~  199 (421)
                      .|.+|. ........+   .+...+++..+|++||++|..++|.||+.+++.+.|.++++++++++.+.+...    .+.
T Consensus        97 ~F~~r~-~~~~~d~~~---~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~  172 (499)
T KOG0158|consen   97 NFYNRK-RPIYGDPED---PLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEI  172 (499)
T ss_pred             cCcCCC-CCCcCCCCC---cccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccH
Confidence            999954 111111111   334578999999999999999999999999999999999999999999998632    222


Q ss_pred             cc------------cccccccccccCCCchHHHHHHHHHHHHH-hhhc--cccccchhhhhcCcccHHHHHHHhHHHHHH
Q psy16903        200 FD------------TAMGIEINAQRDSKSDYVRAVYEISELTI-VRSL--RPWLWHPLVFKWTKYGRRYNQCLSVLHGFT  264 (421)
Q Consensus       200 ~d------------~~fg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (421)
                      .|            ++||.+.++..+...++.......+.... ....  .....+|.+..+...........+.+.+.+
T Consensus       173 ~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v  252 (499)
T KOG0158|consen  173 KDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLV  252 (499)
T ss_pred             HHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHH
Confidence            33            99999999988777777665555444421 1111  011122222222222333444556667777


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCcchhhcccchhHHHHHHHHhccc---CC--C-CCCHHHHHHHHhHHhhccchhHH
Q psy16903        265 NKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEH---AS--T-PLTDVEIREEVDTFMFEGHDTTT  338 (421)
Q Consensus       265 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~---~~--~-~~s~~~i~~~~~~~~~aG~dTt~  338 (421)
                      ...++.|..+                     +..++|+++.|+++..+   +.  . .+|.++|+++|+.+++||.||||
T Consensus       253 ~~~v~~R~~~---------------------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts  311 (499)
T KOG0158|consen  253 NSRVEQREKE---------------------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTA  311 (499)
T ss_pred             HHHHHHHHhc---------------------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHH
Confidence            7777776222                     34578999999998753   11  1 59999999999999999999999


Q ss_pred             HHHHHHHHHHccChhHHHHHHHHHHHhccCCCCCCCChhhhccchHHHHHHHhhhcCCCCcccccccccccCc
Q psy16903        339 AGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTRSLPK  411 (421)
Q Consensus       339 ~~l~~~l~~La~~p~~q~kl~~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~p~~~~~~r~~~~  411 (421)
                      ++|++++|+||+||++|+|||+||++++.+.  ..+++|.+.+|+||++||+||||+||++|.   +.|...+
T Consensus       312 ~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~--~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~---~~R~C~k  379 (499)
T KOG0158|consen  312 STLSFALYELAKNPDVQDKLREEIDEVLEEK--EGLTYDSLSKLKYLDMVIKETLRLYPPAPF---LNRECTK  379 (499)
T ss_pred             HHHHHHHHHHhcChHHHHHHHHHHHHHhccc--CCCCHHHHhCCcHHHHHHHHHHhhCCCccc---ccceecC
Confidence            9999999999999999999999999998765  339999999999999999999999998875   4565554

>KOG0156|consensus Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>KOG0157|consensus Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>KOG0159|consensus Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0684|consensus Back     alignment and domain information
>KOG0157|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
3dbg_A 467 Crystal Structure Of Cytochrome P450 170a1 (Cyp170a 2e-10
1w0e_A 485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 7e-08
3ua1_A 487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 7e-08
1tqn_A 486 Crystal Structure Of Human Microsomal P450 3a4 Leng 8e-08
2q9f_A 456 Crystal Structure Of Human Cytochrome P450 46a1 In 4e-07
2ve3_A 444 Retinoic Acid Bound Cyanobacterial Cyp120a1 Length 1e-06
1smi_A 471 A Single Mutation Of P450 Bm3 Induces The Conformat 1e-06
3ekf_A 470 Crystal Structure Of The A264q Heme Domain Of Cytoc 3e-06
2ij4_A 470 Structure Of The A264k Mutant Of Cytochrome P450 Bm 4e-06
2ij3_A 470 Structure Of The A264h Mutant Of Cytochrome P450 Bm 6e-06
1jpz_A 473 Crystal Structure Of A Complex Of The Heme Domain O 6e-06
3npl_A 470 Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme D 6e-06
3kx3_A 470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 6e-06
1zo4_A 473 Crystal Structure Of A328s Mutant Of The Heme Domai 6e-06
1zoa_A 473 Crystal Structure Of A328v Mutant Of The Heme Domai 6e-06
3ben_A 470 Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine 6e-06
2nnb_A 471 The Q403k Mutnat Heme Domain Of Flavocytochrome P45 6e-06
2ij2_A 470 Atomic Structure Of The Heme Domain Of Flavocytochr 6e-06
1p0x_A 455 F393y Mutant Heme Domain Of Flavocytochrome P450 Bm 6e-06
2hpd_A 471 Crystal Structure Of Hemoprotein Domain Of P450bm-3 6e-06
2uwh_A 458 Cytochrome P450 Bm3 Mutant In Complex With Palmitic 6e-06
1p0v_A 455 F393a Mutant Heme Domain Of Flavocytochrome P450 Bm 6e-06
2x7y_A 455 P450 Bm3 F87a In Complex With Dmso Length = 455 6e-06
2bmh_A 455 Modeling Protein-Substrate Interactions In The Heme 7e-06
1bvy_A 458 Complex Of The Heme And Fmn-Binding Domains Of The 7e-06
3kx4_A 470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 7e-06
3hf2_A 482 Crystal Structure Of The I401p Mutant Of Cytochrome 7e-06
1jme_A 455 Crystal Structure Of Phe393his Cytochrome P450 Bm3 7e-06
3m4v_A 482 Crystal Structure Of The A330p Mutant Of Cytochrome 7e-06
1p0w_A 455 F393w Mutant Heme Domain Of Flavocytochrome P450 Bm 7e-06
3ekd_A 470 Crystal Structure Of The A264m Heme Domain Of Cytoc 9e-06
3qi8_B 472 Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) 1e-05
3cbd_A 455 Directed Evolution Of Cytochrome P450 Bm3, To Octan 1e-05
3psx_A 487 Crystal Structure Of The Kt2 Mutant Of Cytochrome P 1e-05
4dud_A 471 Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Le 1e-05
4duf_A 471 Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Seroto 1e-05
4duc_A 472 Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Leng 2e-05
3ekb_A 470 Crystal Structure Of The A264c Mutant Heme Domain O 2e-05
1fah_A 471 Structure Of Cytochrome P450 Length = 471 2e-05
3dgi_A 461 Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Le 2e-05
1yqo_A 455 T268a Mutant Heme Domain Of Flavocytochrome P450 Bm 2e-05
1yqp_A 455 T268n Mutant Cytochrome Domain Of Flavocytochrome P 2e-05
4dub_A 472 Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopami 3e-05
4dua_A 471 Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Leng 3e-05
4i8v_A 491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 4e-05
4dtw_B 469 Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Seroto 4e-05
4du2_B 470 Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamin 5e-05
3kx5_A 470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 9e-05
2hi4_A 495 Crystal Structure Of Human Microsomal P450 1a2 In C 3e-04
2w0a_A 455 Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[( 4e-04
1x8v_A 455 Estriol-Bound And Ligand-Free Structures Of Sterol 4e-04
1u13_A 455 Crystal Structure Analysis Of The C37lC151TC442A-Tr 5e-04
1ea1_A 455 Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) 5e-04
3e4e_A 476 Human Cytochrome P450 2e1 In Complex With The Inhib 9e-04
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From Streptomyces Coelicolor Length = 467 Back     alignment and structure 
Iteration: 1

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 32/248 (12%)
Query: 154 GAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDK--LGDKCDGKAFDTAMGIEINAQ 211
           G      R+ I P F    +  +  +  E+   L ++   G   D  +    + + + A+
Sbjct: 109 GPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAAR 168
Query: 212 RDSKSDYVRAVYE---ISELTIVRSLRPWLWHPL--VFKWT-KYGRRYNQCLSVLHGFTN 265
              +  Y+    E   ++  T+ R +   +  PL  +++      RR+N  L+ LH   +
Sbjct: 169 CLLRGQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVD 228
Query: 266 KVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREE 325
           ++I ER+          G KPD               L  LLEA +    P+ + EI ++
Sbjct: 229 EIIAERRA--------SGQKPDD-------------LLTALLEAKDDNGDPIGEQEIHDQ 267
Query: 326 VDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYL 385
           V   +  G +T  + I W L  L  HP + D++  E++ +      R +   D+  +++ 
Sbjct: 268 VVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG---GRPVAFEDVRKLRHT 324
Query: 386 ERVIKEDL 393
             VI E +
Sbjct: 325 GNVIVEAM 332
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 Length = 444 Back     alignment and structure
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational Rearrangement Seen Upon Substrate-Binding In Wild-Type Enzyme Length = 471 Back     alignment and structure
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of P450bm- 3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain, A Ruthenium Modified P450 Bm3 Mutant Length = 470 Back     alignment and structure
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of P450bm-3 Length = 473 Back     alignment and structure
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of P450bm-3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine Inhibitor Bound To The Heme Domain Of Cytochrome P450-Bm3 Length = 470 Back     alignment and structure
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3 Length = 471 Back     alignment and structure
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome P450- Bm3 Length = 470 Back     alignment and structure
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A Prototype For Microsomal P450's Length = 471 Back     alignment and structure
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid Length = 458 Back     alignment and structure
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso Length = 455 Back     alignment and structure
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain Of Cytochrome P450bm-3 Length = 455 Back     alignment and structure
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The Cytochrome P450(Bm-3) Length = 458 Back     alignment and structure
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) Length = 472 Back     alignment and structure
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane Monoxygenase 139-3 Length = 455 Back     alignment and structure
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3 Length = 487 Back     alignment and structure
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin Length = 471 Back     alignment and structure
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Length = 472 Back     alignment and structure
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450 Length = 471 Back     alignment and structure
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Length = 461 Back     alignment and structure
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine Length = 472 Back     alignment and structure
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin Length = 469 Back     alignment and structure
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine Length = 470 Back     alignment and structure
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl] Cyclohexanecarboxamide Length = 455 Back     alignment and structure
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol 14alpha- Demethylase (Cyp51) Length = 455 Back     alignment and structure
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple Mutant Of Cyp51 From Mycobacterium Tuberculosis Length = 455 Back     alignment and structure
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From Mycobacterium Tuberculosis In Complex With Fluconazole Length = 455 Back     alignment and structure
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4- Methylpyrazole Length = 476 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 9e-91
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 1e-18
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 4e-85
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 3e-13
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 2e-71
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 5e-13
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 2e-67
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 4e-09
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 9e-63
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 1e-10
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 9e-60
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 4e-05
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 7e-54
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 5e-04
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 1e-46
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 2e-07
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 3e-42
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 1e-40
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 3e-33
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 6e-32
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 9e-31
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 5e-25
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 1e-24
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 9e-22
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 3e-20
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 6e-19
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 3e-16
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 6e-12
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 8e-12
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 3e-11
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 3e-11
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 2e-10
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 4e-10
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 1e-08
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 2e-08
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 2e-08
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
 Score =  281 bits (720), Expect = 9e-91
 Identities = 51/256 (19%), Positives = 95/256 (37%), Gaps = 41/256 (16%)

Query: 154 GAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKA-FD----------- 201
             +WH  R++I   F    L   ++ F EK + LV+ L  K DG+               
Sbjct: 83  YERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMD 142

Query: 202 ----TAMGIEINAQRDSKSDYVRAVYEISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCL 257
                A G+E +    ++    +AV  + E           +   +    K  R   + +
Sbjct: 143 ILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKF---LPGKRKQLREVRESI 199

Query: 258 SVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHASTPL 317
             L       ++ R++ L+                  G++     L  +L+A E      
Sbjct: 200 RFLRQVGRDWVQRRREALKR-----------------GEEVPADILTQILKAEE---GAQ 239

Query: 318 TDVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMR 377
            D  + +   TF   GH+T+   + +++  L   P    ++ AE+D +      R +   
Sbjct: 240 DDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGS--KRYLDFE 297

Query: 378 DLNDMKYLERVIKEDL 393
           DL  ++YL +V+KE L
Sbjct: 298 DLGRLQYLSQVLKESL 313
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query421
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.98
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.96
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.96
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 99.96
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.95
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.95
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.95
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 99.95
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.95
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.95
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.95
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.95
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.95
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.95
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.95
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.95
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.95
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 99.95
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.95
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.95
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.95
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.95
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.95
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.95
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.95
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.95
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.95
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 99.95
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.95
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.94
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.94
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.94
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.94
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.94
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.94
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.94
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 99.94
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.94
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.94
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.94
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 99.94
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.94
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.94
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.93
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.93
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.93
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.93
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.93
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.93
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.92
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 99.92
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.92
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 99.91
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.89
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.82
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 99.14
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
Probab=100.00  E-value=3e-39  Score=313.11  Aligned_cols=321  Identities=20%  Similarity=0.309  Sum_probs=217.8

Q ss_pred             hcChhhHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccccccccCcccccccchhhhhhhhhHHHHHHH-H
Q psy16903         44 KWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLVENSPFSVITPTFHFKILDVFVDVFVEK-C  122 (421)
Q Consensus        44 ~~t~~~~~~~~~~~pl~g~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~v~v~~~~~~~~i~~~~-~  122 (421)
                      +|.+.+.|..+ ..|++|++..+.+.....+..+.+.|+         +++.  .+.+..|.|+++||+++++++.++ +
T Consensus        10 ~~k~~~~PGP~-~~PliGn~~~~~~~~~~~~~~~~~~yG---------~i~~--~~~g~~~~vvv~dp~~i~~il~~~~~   77 (485)
T 3nxu_A           10 LFKKLGIPGPT-PLPFLGNILSYHKGFCMFDMECHKKYG---------KVWG--FYDGQQPVLAITDPDMIKTVLVKECY   77 (485)
T ss_dssp             HHHHHTCCCCC-CBTTTBTGGGGGGCHHHHHHHHHHHHC---------SEEE--EEETTEEEEEECCHHHHHHHHTTTTT
T ss_pred             HHhhCCCCCCC-CcCeecCcHHhhcChHHHHHHHHHHcC---------CeEE--EEeCCCCEEEECCHHHHHHHHhccch
Confidence            34455555433 478899887765433333334333333         3333  566777889999999999999765 3


Q ss_pred             HHHhhhcccccCCCccccccccccccccccCchhhHHhhhhhCCcCchhhhhHhHHHHHHHHHHHHHHHhhc-cCCcccc
Q psy16903        123 QILVDKLGDKCDGKAFDVYPFITRCAMDIICGAKWHSHRKMITPTFHFKILDVFVDVFVEKCQILVDKLGDK-CDGKAFD  201 (421)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~~~~~l~~~-~~~~~~d  201 (421)
                      ..+.++..       +.... +.+.++++.+|+.|+++|++++++|+.++++.+.+.+.++++.+++.|.+. ..+.++|
T Consensus        78 ~~f~~r~~-------~~~~~-~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d  149 (485)
T 3nxu_A           78 SVFTNRRP-------FGPVG-FMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVT  149 (485)
T ss_dssp             TTCCCCCC-------CSCCG-GGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             hhccCCcc-------ccccc-ccccCccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCc
Confidence            33333221       11122 346789999999999999999999999999999999999999999999754 2345566


Q ss_pred             ---------------cccccccccccCCCchHHHHHHHHHHHH------HhhhccccccchhhhhcCcccHHHHHHHhHH
Q psy16903        202 ---------------TAMGIEINAQRDSKSDYVRAVYEISELT------IVRSLRPWLWHPLVFKWTKYGRRYNQCLSVL  260 (421)
Q Consensus       202 ---------------~~fg~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (421)
                                     ++||.+++..++....+...+...+...      ......|++. +.. ...............+
T Consensus       150 ~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~~-~~~~~~~~~~~~~~~~  227 (485)
T 3nxu_A          150 LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLI-PIL-EVLNICVFPREVTNFL  227 (485)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHH-HHH-HHTTCCSSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhH-HHH-HHhhhhhchHHHHHHH
Confidence                           7899999887665555555443322110      0001111110 100 0111111111222334


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCCcchhhcccchhHHHHHHHHhcccC----CCCCCHHHHHHHHhHHhhccchh
Q psy16903        261 HGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEHA----STPLTDVEIREEVDTFMFEGHDT  336 (421)
Q Consensus       261 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~----~~~~s~~~i~~~~~~~~~aG~dT  336 (421)
                      .+++.+.++++.+.                    ......|+++.|+++..+.    +..++++++.+++.++++||+||
T Consensus       228 ~~~~~~~~~~~~~~--------------------~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dT  287 (485)
T 3nxu_A          228 RKSVKRMKESRLED--------------------TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYET  287 (485)
T ss_dssp             HHHHHHHHHHHHHC--------------------C---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc--------------------cCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHH
Confidence            44444444433221                    1223468999999875431    34689999999999999999999


Q ss_pred             HHHHHHHHHHHHccChhHHHHHHHHHHHhccCCCCCCCChhhhccchHHHHHHHhhhcCCCCcccccccccccCc
Q psy16903        337 TTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIRTKYALNWTRSLPK  411 (421)
Q Consensus       337 t~~~l~~~l~~La~~p~~q~kl~~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~p~~~~~~r~~~~  411 (421)
                      |+++|+|++++|++||++|+||++||+++++.+  +.++++++.+||||+|||+|+||++|++|.   ++|++++
T Consensus       288 Ta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~--~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~---~~R~~~~  357 (485)
T 3nxu_A          288 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNK--APPTYDTVLQMEYLDMVVNETLRLFPIAMR---LERVCKK  357 (485)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTT--CCCCHHHHHHCHHHHHHHHHHHHHSCSCSC---EEEECCS
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccC--CCCCHHHHhcChHHHHHHHHHHhcCCCccC---cceeeCC
Confidence            999999999999999999999999999999875  789999999999999999999999998763   4577665
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 421
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 7e-15
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 7e-11
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 5e-09
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 3e-05
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 73.9 bits (180), Expect = 7e-15
 Identities = 41/285 (14%), Positives = 92/285 (32%), Gaps = 35/285 (12%)

Query: 123 QILVDKLGDKCDGKAFDVYPFITRCAMDIIC-GAKWHSHRKMITPTFH-FKILDVFVDVF 180
           + LVD+           V   I +    I   G +W + R+    T   F +    V+  
Sbjct: 59  EALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 118

Query: 181 VEKCQILVDKLGDKCDGKAFD---------------TAMGIEINAQRDSKSDYVRAV-YE 224
           +++    + +   K  G   D                  G   + +       +      
Sbjct: 119 IQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 178

Query: 225 ISELTIVRSLRPWLWHPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGD 284
            S ++   S    L+   +  +    R+  + L  ++ F  + +++ +  L+        
Sbjct: 179 FSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNP---- 234

Query: 285 KPDTTEDEDLGKKKRMAFLDLLLEASEHASTPLTDVEIREEVDTFMFEGHDTTTAGICWS 344
                      +     +L  + +     S+      +   V +  F G +TT+  + + 
Sbjct: 235 -----------RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 283

Query: 345 LFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVI 389
             L+  +PH  ++V  E++ +      R   + D   M Y + VI
Sbjct: 284 FLLMLKYPHVTERVQKEIEQVIG--SHRPPALDDRAKMPYTDAVI 326
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query421
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.97
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.96
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.94
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.93
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.88
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.85
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.85
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.84
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.83
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.83
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.82
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.79
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.74
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.72
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.69
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.66
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.6
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.6e-34  Score=275.22  Aligned_cols=272  Identities=16%  Similarity=0.243  Sum_probs=203.7

Q ss_pred             cccccccchhhhhhhhhHHHHHHHHHHHhhhcccccCCCccccccccccccccc--cCchhhHHhhhhhCCcCchhhhhH
Q psy16903         98 PFSVITPTFHFKILDVFVDVFVEKCQILVDKLGDKCDGKAFDVYPFITRCAMDI--ICGAKWHSHRKMITPTFHFKILDV  175 (421)
Q Consensus        98 ~~~~~~p~v~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~g~~w~~~R~~~~~~fs~~~l~~  175 (421)
                      .+++..|.|++++++++++++.++..       .+...........+.|.|+++  .+|++|+++|+++.++|+.++++.
T Consensus        40 ~~~~~~~~vvl~~~~~i~~v~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rk~l~~~fs~~~l~~  112 (453)
T d2ij2a1          40 FEAPGRVTRYLSSQRLIKEACDESRF-------DKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKG  112 (453)
T ss_dssp             EEETTEEEEEECCHHHHHHHTCTTTE-------EECCCHHHHHHHHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHH
T ss_pred             EEeCCceEEEECCHHHHHHHHhcCCc-------ccccccHhHHHHHhcCCcEEecCCChHHHHHHHHHHHHHhhhhhhhh
Confidence            67778888999999999999854421       111222222333455677765  478999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhccCCcccc---------------cccccccccccCC-CchHHHHHHHHHHHHHhhhcccccc
Q psy16903        176 FVDVFVEKCQILVDKLGDKCDGKAFD---------------TAMGIEINAQRDS-KSDYVRAVYEISELTIVRSLRPWLW  239 (421)
Q Consensus       176 ~~~~i~~~~~~~~~~l~~~~~~~~~d---------------~~fg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  239 (421)
                      +.+.+.++++++++.|.+...++.+|               ++||.+++..... ..++...+...+.......   +..
T Consensus       113 ~~~~i~~~~~~li~~l~~~~~~~~idl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  189 (453)
T d2ij2a1         113 YHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKL---QRA  189 (453)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC------
T ss_pred             hhhhHHHHHHHHHHHhhhcCCCCccchHHHHHHHhhhcchhcccccccchhhhccchHHHHhhhhccchhhhhh---hhc
Confidence            99999999999999998765566666               7799888765432 3444444443333322211   112


Q ss_pred             chhhhhcCcccHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCcchhhcccchhHHHHHHHHhccc-CCCCCC
Q psy16903        240 HPLVFKWTKYGRRYNQCLSVLHGFTNKVIKERKQLLEEKKNIGGDKPDTTEDEDLGKKKRMAFLDLLLEASEH-ASTPLT  318 (421)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~-~~~~~s  318 (421)
                      .++...+....+.+.+..+.+.+++.++++++++.                     .+...|+++.++++... .+..++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------------------~~~~~d~l~~ll~~~~~~~~~~ls  248 (453)
T d2ij2a1         190 NPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS---------------------GEQSDDLLTHMLNGKDPETGEPLD  248 (453)
T ss_dssp             CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------CCCCSSHHHHHHHCCCTTTCCCCC
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHhhhccc---------------------cccccchhhhhhhhcccccCcchh
Confidence            22222223344556667778888888888877654                     23456899999887653 345799


Q ss_pred             HHHHHHHHhHHhhccchhHHHHHHHHHHHHccChhHHHHHHHHHHHhccCCCCCCCChhhhccchHHHHHHHhhhcCCCC
Q psy16903        319 DVEIREEVDTFMFEGHDTTTAGICWSLFLLGSHPHYQDKVCAELDTIFAEDPDRKITMRDLNDMKYLERVIKEDLIPTIR  398 (421)
Q Consensus       319 ~~~i~~~~~~~~~aG~dTt~~~l~~~l~~La~~p~~q~kl~~Ei~~~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~  398 (421)
                      ++++.+++.++++||+|||+++++|++++|++||++|+++++|++.+.+.   ..++++++.+||||+|||+|+||++|+
T Consensus       249 ~~ei~~~~~~~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~~~~~---~~~~~~~l~~~p~L~a~i~E~lR~~p~  325 (453)
T d2ij2a1         249 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPT  325 (453)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS---SSCCHHHHHTCHHHHHHHHHHHHHSCS
T ss_pred             hhHHHhhhccccccccccchhhhhcchhhhhcccccchhhhhhhhhhhcc---ccCChhhhhcCCcchhhhhhhhccccc
Confidence            99999999999999999999999999999999999999999999998775   567999999999999999999999997


Q ss_pred             ccccc
Q psy16903        399 TKYAL  403 (421)
Q Consensus       399 ~p~~~  403 (421)
                      ++...
T Consensus       326 ~~~~~  330 (453)
T d2ij2a1         326 APAFS  330 (453)
T ss_dssp             SCEEE
T ss_pred             ccccc
Confidence            66444
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure