Psyllid ID: psy16923

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MFSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKKFDVSLHPPPQPPEDHNVQLKVTPLVLCCNYWIVLEFV
Secondary Structure (PSIPRED)
cccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccc
Secondary Structure Prediction (SSPRO)
ccccEccccHHHHHHHHcccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccHccHHcHHHHHHHHHHccccccccccHccccEccccHHHHHEHHcccc
Coil and Loop (DISEMBL)
MFSRFKTKYRLKLHldthgetpygcphcpmklntrRTLRMHLVVhrdtkayqcvtcgksfrrskdlknhhnlhtgkrpytcpwcsrtfangsncrshkrrmhpeeLKLYESSLGIvhkekkkfdvslhpppqppedhnvqlkvTPLVLCCNYWIVLEFV
Flexible Loop (DISEMBL)
mfsrfktkYRLKlhldthgetpygcpHCPMKLNTRRTLRMHLVvhrdtkayqCVTCGKsfrrskdlknhhnlhtgkrpytcpwcsRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKKFDVSLHPPPQPpedhnvqlkVTPLVLCCNYWIVLEFV
Low Complexity Region (SEG)
MFSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKKFDVSLHPPPQPPEDHNVQLKVTPLVLCCNYWIVLEFV
Disordered region (IsUnstruct)
******TKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANG***********************************************VQLKVTPLVLCCNYWIVLEF*
Disordered Region (DISOPRED)
*FSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHK*KKKFDVSLHPPPQPPEDHNVQLKVTPLVLCCNYWIVLEF*
Disordered Region (DISEMBL)
MFSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKKFDVSLHPPPQPPEDHNVQLKVTPLVLCCNYWIVLEFV
Disordered Region (DISPRO)
MFSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKKFDVSLHPPPQPPEDHNVQLKVTPLVLCCNYWIV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKKFDVSLHPPPQPPEDHNVQLKVTPLVLCCNYWIVLEFV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	159	2.2.26 [Sep-21-2011]
Q9VJN5	470	Zinc finger protein weckl	no	N/A	0.591	0.2	0.47	8e-20
Q5EBL2	1055	Zinc finger protein 628 O	yes	N/A	0.597	0.090	0.437	5e-18
Q8CJ78	1038	Zinc finger protein 628 O	yes	N/A	0.597	0.091	0.437	7e-16
Q7TNK3	368	Zinc finger protein 24 OS	no	N/A	0.641	0.277	0.388	9e-16
Q91VN1	368	Zinc finger protein 24 OS	no	N/A	0.641	0.277	0.388	1e-15
Q5RAE6	368	Zinc finger protein 24 OS	yes	N/A	0.641	0.277	0.388	1e-15
P17028	368	Zinc finger protein 24 OS	no	N/A	0.641	0.277	0.388	1e-15
Q3B7N9	581	Myoneurin OS=Bos taurus G	no	N/A	0.691	0.189	0.369	3e-15
Q5JNZ3	666	Zinc finger protein 311 O	no	N/A	0.597	0.142	0.427	6e-15
Q80X44	710	Zinc finger and BTB domai	no	N/A	0.943	0.211	0.322	6e-15

>sp|Q9VJN5|WEK_DROME Zinc finger protein weckle OS=Drosophila melanogaster GN=wek PE=1 SV=1

 Score = 96.3 bits (238), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 59/100 (59%)

Query: 5   FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSK 64
           FK K RL++H  THGE  + C  C  KL TR  L  H  VH D + ++C  CG   + S 
Sbjct: 337 FKNKARLRVHSQTHGEPKFECNVCGKKLQTRAILNKHKYVHTDERRFKCEVCGSGCKNST 396

Query: 65  DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 104
            LK H   HTG RPY C +C + FA+ +NCRSHK + HPE
Sbjct: 397 ALKIHLLGHTGLRPYVCKYCGKAFASNTNCRSHKWKKHPE 436

Acts as an adapter to assemble/stabilize a Toll/wek/Myd88/tube complex; required for efficient recruitment of Myd88 to Toll. Dispensable for innate immune response; plays a minimal role, if any, in the immune defense against Gram-positive bacteria and fungi. Involved in dorsoventral axis determination.
Drosophila melanogaster (taxid: 7227)

>sp|Q5EBL2|ZN628_HUMAN Zinc finger protein 628 OS=Homo sapiens GN=ZNF628 PE=2 SV=2

 Score = 90.1 bits (222), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           FK     + HL  H GE PY CP CP       +LR H  VH   + Y C  CGKSF +S
Sbjct: 125 FKWSSHYQYHLRQHTGERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYTCGVCGKSFTQS 184

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +L+ H  +HTG+RP+ CP C +TF + SN   H+R
Sbjct: 185 TNLRQHQRVHTGERPFRCPLCPKTFTHSSNLLLHQR 220

Transcription activator. Binds DNA on GT-box consensus sequence 5'-TTGGTT-3'.

Homo sapiens (taxid: 9606)

>sp|Q8CJ78|ZN628_MOUSE Zinc finger protein 628 OS=Mus musculus GN=Znf628 PE=2 SV=2

 Score = 83.2 bits (204), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           FK     + HL  H GE PY CP CP       +LR H  VH   + Y C  CGKSF +S
Sbjct: 127 FKWSSHYQYHLRQHTGERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYTCGICGKSFTQS 186

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +L+ H  +HTG+RP+ CP C +TF + SN   H R
Sbjct: 187 TNLRQHQRVHTGERPFRCPLCPKTFTHSSNLLLHHR 222

Transcription activator. Binds DNA on GT-box consensus sequence 5'-TTGGTT-3'.

Mus musculus (taxid: 10090)

>sp|Q7TNK3|ZNF24_RAT Zinc finger protein 24 OS=Rattus norvegicus GN=Znf24 PE=2 SV=1

 Score = 82.8 bits (203), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F     L LH   H GE PYGC  C    +    L  H  VH   K Y+C+ CGK+F ++
Sbjct: 260 FSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 319

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL 106
             L NH  +HTG++PY C  C ++++  SN   H+RR + E+L
Sbjct: 320 SGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEKL 362

Transcription factor required for myelination of differentiated oligodendrocytes. Required for the conversion of oligodendrocytes from the premyelinating to the myelinating state. In the developing central nervous system (CNS), involved in the maintenance in the progenitor stage by promoting the cell cycle. Specifically bind to the 5'-TCAT-3' DNA sequence. Has transcription repressor activity in vitro.

Rattus norvegicus (taxid: 10116)

>sp|Q91VN1|ZNF24_MOUSE Zinc finger protein 24 OS=Mus musculus GN=Znf24 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F     L LH   H GE PYGC  C    +    L  H  VH   K Y+C+ CGK+F ++
Sbjct: 260 FSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 319

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL 106
             L NH  +HTG++PY C  C ++++  SN   H+RR + E+L
Sbjct: 320 SGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEKL 362

Transcription factor required for myelination of differentiated oligodendrocytes. Required for the conversion of oligodendrocytes from the premyelinating to the myelinating state. In the developing central nervous system (CNS), involved in the maintenance in the progenitor stage by promoting the cell cycle. Specifically bind to the 5'-TCAT-3' DNA sequence. Has transcription repressor activity in vitro.

Mus musculus (taxid: 10090)

>sp|Q5RAE6|ZNF24_PONAB Zinc finger protein 24 OS=Pongo abelii GN=ZNF24 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F     L LH   H GE PYGC  C    +    L  H  VH   K Y+C+ CGK+F ++
Sbjct: 260 FSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 319

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL 106
             L NH  +HTG++PY C  C ++++  SN   H+RR + E+L
Sbjct: 320 SGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEKL 362

Transcription factor required for myelination of differentiated oligodendrocytes. Required for the conversion of oligodendrocytes from the premyelinating to the myelinating state. In the developing central nervous system (CNS), involved in the maintenance in the progenitor stage by promoting the cell cycle. Specifically bind to the 5'-TCAT-3' DNA sequence. Has transcription repressor activity in vitro.

Pongo abelii (taxid: 9601)

>sp|P17028|ZNF24_HUMAN Zinc finger protein 24 OS=Homo sapiens GN=ZNF24 PE=1 SV=4

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F     L LH   H GE PYGC  C    +    L  H  VH   K Y+C+ CGK+F ++
Sbjct: 260 FSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 319

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL 106
             L NH  +HTG++PY C  C ++++  SN   H+RR + E+L
Sbjct: 320 SGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEKL 362

Transcription factor required for myelination of differentiated oligodendrocytes. Required for the conversion of oligodendrocytes from the premyelinating to the myelinating state. In the developing central nervous system (CNS), involved in the maintenance in the progenitor stage by promoting the cell cycle. Specifically bind to the 5'-TCAT-3' DNA sequence (By similarity). Has transcription repressor activity in vitro.

Homo sapiens (taxid: 9606)

>sp|Q3B7N9|MYNN_BOVIN Myoneurin OS=Bos taurus GN=MYNN PE=2 SV=1

 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 4   RFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRR 62
           +F T   LK+H   H GE PY C  C  +     TL  H+  H   K Y C TCGK+F  
Sbjct: 394 QFATSSNLKIHARKHSGEKPYVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAV 453

Query: 63  SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSL 113
           S  L  H   HTG+RP+ C  C  ++ +  N + HK ++H    K+ +SS+
Sbjct: 454 SSSLITHSRKHTGERPFICELCGNSYTDIKNLKKHKTKVHSGADKILDSSI 504

Bos taurus (taxid: 9913)

>sp|Q5JNZ3|ZN311_HUMAN Zinc finger protein 311 OS=Homo sapiens GN=ZNF311 PE=2 SV=2

 Score = 80.1 bits (196), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           FKT+ RL +H   H GE PY C  C      + +L +H  +H   K Y+C  CGK+F  S
Sbjct: 340 FKTRNRLCMHQLIHTGEKPYKCNCCGKAFQFKHSLTIHGRIHTGEKPYECEECGKAFSGS 399

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            DL  H  +HTG+RPY C  C R F+  S+   HKR
Sbjct: 400 SDLTKHIRIHTGERPYECSKCGRAFSRSSDLSKHKR 435

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q80X44|ZBT24_MOUSE Zinc finger and BTB domain-containing protein 24 OS=Mus musculus GN=Zbtb24 PE=1 SV=1

 Score = 80.1 bits (196), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 2/152 (1%)

Query: 4   RFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRR 62
           +F    +LK HL TH GE P+ C  C      + +L+ H+ +HR  K Y C  CGK F  
Sbjct: 413 KFMDVSQLKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIRIHRGEKPYSCSICGKCFSD 472

Query: 63  SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKK 122
           S   + H  LHTGK+P++CP C   FA   N ++H +    E+     SS+   + ++ +
Sbjct: 473 SSAKRRHCILHTGKKPFSCPECGLQFARLDNLKAHLKIHSKEKHTADSSSVSGSNVDEGR 532

Query: 123 FDVSLHP-PPQPPEDHNVQLKVTPLVLCCNYW 153
             + L P       +  +QL VT  V   N+ 
Sbjct: 533 NILQLQPYQLSTSGEQEIQLLVTDSVHNINFM 564

May be involved in BMP2-induced transcription.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
242025650	738	zinc finger protein, putative [Pediculus	0.685	0.147	0.781	2e-47
312379353	297	hypothetical protein AND_08820 [Anophele	0.710	0.380	0.619	8e-34
170049176	636	conserved hypothetical protein [Culex qu	0.591	0.147	0.594	3e-33
157134662	526	hypothetical protein AaeL_AAEL013154 [Ae	0.654	0.197	0.596	1e-32
158299706	433	AGAP009010-PA [Anopheles gambiae str. PE	0.685	0.251	0.6	1e-32
195112770	572	GI22252 [Drosophila mojavensis] gi|19391	0.660	0.183	0.572	1e-29
195054158	569	GH22499 [Drosophila grimshawi] gi|193895	0.647	0.181	0.583	2e-29
195395296	593	GJ10855 [Drosophila virilis] gi|19414298	0.716	0.192	0.547	2e-29
195499722	631	GE24700 [Drosophila yakuba] gi|194183168	0.622	0.156	0.583	3e-29
40882475	634	RE70312p [Drosophila melanogaster]	0.641	0.160	0.570	2e-28

>gi|242025650|ref|XP_002433237.1| zinc finger protein, putative [Pediculus humanus corporis] gi|212518778|gb|EEB20499.1| zinc finger protein, putative [Pediculus humanus corporis]

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/110 (78%), Positives = 100/110 (90%)

Query: 5   FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSK 64
           FKTKYRLK+H+DTH ET Y CP C + LNTRRTLRMHL+VH+D KA+QC TCGK+F+RSK
Sbjct: 456 FKTKYRLKIHMDTHVETRYQCPVCTLTLNTRRTLRMHLLVHKDDKAFQCTTCGKAFKRSK 515

Query: 65  DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 114
           DLKNH+NLHTG+RPYTCP+C RTFANGSNCRSHKRRMHPEELK+YE++L 
Sbjct: 516 DLKNHYNLHTGRRPYTCPFCQRTFANGSNCRSHKRRMHPEELKMYEAALA 565

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312379353|gb|EFR25654.1| hypothetical protein AND_08820 [Anopheles darlingi]

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 82/113 (72%)

Query: 4   RFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           RFK   RLK H DTH ET Y CPHC +KLNTRRTL MHLVVH D K ++C  CG  ++R 
Sbjct: 171 RFKNSGRLKTHEDTHNETMYVCPHCGLKLNTRRTLNMHLVVHSDMKKFKCQYCGNEYKRG 230

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIV 116
           K LK H  LHTG RPYTCP+C +TF NGSNCRSHK++ HP+EL   E+S G +
Sbjct: 231 KALKAHLILHTGLRPYTCPFCDKTFTNGSNCRSHKKKFHPKELAELEASGGQI 283

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170049176|ref|XP_001854343.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167871059|gb|EDS34442.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%)

Query: 4   RFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           +FK   RLK H D H +T Y CPHC ++LNT+RTL+MH+VVH D K ++C  CG  ++RS
Sbjct: 407 KFKNLPRLKTHEDIHTDTLYVCPHCGLQLNTKRTLKMHMVVHSDQKKFKCQYCGNEYKRS 466

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 114
           K LKNH  LHTG RPY CP+C +TFANGSNCRSHK++ HP+EL   E+S G
Sbjct: 467 KALKNHLILHTGLRPYQCPFCEKTFANGSNCRSHKKKAHPKELAALEASGG 517

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157134662|ref|XP_001663336.1| hypothetical protein AaeL_AAEL013154 [Aedes aegypti] gi|108870396|gb|EAT34621.1| AAEL013154-PA [Aedes aegypti]

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 82/109 (75%)

Query: 4   RFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           +FK   RLK H D H +T Y CPHC ++LNT+RTL+MH+VVH D K ++C  CG  ++RS
Sbjct: 400 KFKNLPRLKTHEDIHNDTLYVCPHCGLQLNTKRTLKMHMVVHSDQKKFKCQYCGNEYKRS 459

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS 112
           K LKNH  LHTG RPY CP+C +TFANGSNCRSHK++ HP+EL   E+S
Sbjct: 460 KALKNHLILHTGLRPYQCPFCEKTFANGSNCRSHKKKAHPKELAALEAS 508

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158299706|ref|XP_319758.4| AGAP009010-PA [Anopheles gambiae str. PEST] gi|157013646|gb|EAA15157.4| AGAP009010-PA [Anopheles gambiae str. PEST]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/110 (60%), Positives = 80/110 (72%)

Query: 5   FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSK 64
           FK   RLK H DTH +T Y CPHC +KLNT+RTL MH+VVH D K ++C  CG  ++RSK
Sbjct: 308 FKNAPRLKTHEDTHNDTLYVCPHCGLKLNTKRTLNMHMVVHSDQKKFKCQECGNEYKRSK 367

Query: 65  DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 114
            LK H  LHTG RPY CP+C +TFANGSNCRSHK++ HP EL   E++ G
Sbjct: 368 ALKAHLILHTGLRPYQCPFCDKTFANGSNCRSHKKKFHPRELAALEAAGG 417

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195112770|ref|XP_002000945.1| GI22252 [Drosophila mojavensis] gi|193917539|gb|EDW16406.1| GI22252 [Drosophila mojavensis]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/110 (57%), Positives = 75/110 (68%)

Query: 2   FSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFR 61
           F RFK K RLK+H DTH    Y C  C +KLNTRRTL MH +VH D K Y+C  CG +F+
Sbjct: 392 FRRFKNKARLKIHSDTHTNNNYECNICGLKLNTRRTLNMHQLVHTDAKQYKCDVCGAAFK 451

Query: 62  RSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES 111
           R K LK H  LHTG RPY C +C + F+NGSNCR HKR+ HP+EL   E+
Sbjct: 452 RGKTLKAHLILHTGIRPYKCNFCGKDFSNGSNCRMHKRKTHPKELAEEEA 501

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195054158|ref|XP_001993993.1| GH22499 [Drosophila grimshawi] gi|193895863|gb|EDV94729.1| GH22499 [Drosophila grimshawi]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 74/108 (68%)

Query: 4   RFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           RFK K RLK+H DTH    Y C  C +KLNTRRTL MH +VH D K Y+C  CG +F+R 
Sbjct: 383 RFKNKARLKIHSDTHTNDSYECNICGLKLNTRRTLNMHQLVHTDAKQYKCDVCGAAFKRG 442

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES 111
           K LK H  LHTG RPY C +C R F+NGSNCR HKR+ HP+EL   E+
Sbjct: 443 KTLKAHLILHTGIRPYKCNFCGRDFSNGSNCRMHKRKTHPKELAEEEA 490

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195395296|ref|XP_002056272.1| GJ10855 [Drosophila virilis] gi|194142981|gb|EDW59384.1| GJ10855 [Drosophila virilis]

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/115 (54%), Positives = 77/115 (66%), Gaps = 1/115 (0%)

Query: 2   FSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFR 61
           F  FK K RLK+H DTH    Y C  C +KLNTRRTL MH +VH D K Y+C  CG +F+
Sbjct: 413 FRSFKNKARLKIHSDTHTNNDYKCNVCGLKLNTRRTLNMHKLVHTDAKQYKCDVCGAAFK 472

Query: 62  RSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIV 116
           R K LK H  LHTG RPY C +C + F+NGSNCR HKR+ HP+EL   E + G++
Sbjct: 473 RGKTLKAHLILHTGIRPYKCNFCGKDFSNGSNCRMHKRKTHPKEL-AEEEARGVI 526

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195499722|ref|XP_002097067.1| GE24700 [Drosophila yakuba] gi|194183168|gb|EDW96779.1| GE24700 [Drosophila yakuba]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 74/108 (68%)

Query: 4   RFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           RFK   RLK+HLDTH    Y C  C +KL TRRT   H +VH DT+ ++C  CG SF+RS
Sbjct: 455 RFKNNARLKIHLDTHSAEIYECTVCGLKLKTRRTFNKHKLVHSDTRQFKCEVCGSSFKRS 514

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES 111
           K LK H  LHTG RPY C +C R FANGSNCRSHKR+ HP+EL   E+
Sbjct: 515 KTLKAHLILHTGIRPYKCNFCGRDFANGSNCRSHKRQAHPKELAEEEA 562

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|40882475|gb|AAR96149.1| RE70312p [Drosophila melanogaster]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 73/107 (68%)

Query: 5   FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSK 64
           FK   RLK+HLDTH    Y C  C +KL TRRT   H +VH DT+ ++C  CG +F+RSK
Sbjct: 459 FKNNARLKIHLDTHSAEIYECTVCGLKLKTRRTFNKHKLVHSDTRQFKCEVCGSAFKRSK 518

Query: 65  DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES 111
            LK H  LHTG RPY C +C R FANGSNCRSHKR+ HP+EL   E+
Sbjct: 519 TLKAHLILHTGIRPYKCNFCGRDFANGSNCRSHKRQAHPKELAEEEA 565

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
FB|FBgn0037794	634	CG6254 [Drosophila melanogaste	0.691	0.173	0.558	5.9e-30
FB|FBgn0032814	607	CG10366 [Drosophila melanogast	0.691	0.181	0.536	1.4e-29
FB|FBgn0032763	513	CG17568 [Drosophila melanogast	0.647	0.200	0.485	8.1e-24
FB|FBgn0001990	470	wek "weckle" [Drosophila melan	0.628	0.212	0.47	4.3e-22
UNIPROTKB|H9KZ43	371	H9KZ43 "Uncharacterized protei	0.805	0.345	0.371	9.2e-21
UNIPROTKB|H9L089	327	H9L089 "Uncharacterized protei	0.597	0.290	0.447	1e-20
UNIPROTKB|H9L2R2	315	H9L2R2 "Uncharacterized protei	0.597	0.301	0.447	1e-20
UNIPROTKB|H9L2R3	356	H9L2R3 "Uncharacterized protei	0.597	0.266	0.447	1e-20
RGD|2323809	1039	Zfp628 "zinc finger protein 62	0.622	0.095	0.43	4.7e-20
ZFIN|ZDB-GENE-071004-59	217	zgc:173620 "zgc:173620" [Danio	0.805	0.589	0.348	5.7e-20

FB|FBgn0037794 CG6254 [Drosophila melanogaster (taxid:7227)]

 Score = 338 (124.0 bits), Expect = 5.9e-30, P = 5.9e-30
 Identities = 62/111 (55%), Positives = 75/111 (67%)

Query:     5 FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSK 64
             FK   RLK+HLDTH    Y C  C +KL TRRT   H +VH DT+ ++C  CG +F+RSK
Sbjct:   459 FKNNARLKIHLDTHSAEIYECTVCGLKLKTRRTFNKHKLVHSDTRQFKCEVCGSAFKRSK 518

Query:    65 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGI 115
              LK H  LHTG RPY C +C R FANGSNCRSHKR+ HP+EL   E + G+
Sbjct:   519 TLKAHLILHTGIRPYKCNFCGRDFANGSNCRSHKRQAHPKELA-EEEARGV 568

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0032814 CG10366 [Drosophila melanogaster (taxid:7227)]

 Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
 Identities = 59/110 (53%), Positives = 77/110 (70%)

Query:     5 FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSK 64
             FK+  RLK H +TH    Y CP C M+LN+R TL  H +VH D   ++C  CG+ F+R+K
Sbjct:   401 FKSANRLKHHKETHDPHKYICPECGMQLNSRTTLNRHRLVHTDQMQHKCDYCGREFKRAK 460

Query:    65 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 114
              LKNH  LHTG +PY+C +C RTFANGSNCR+HK++ HPEEL   E++ G
Sbjct:   461 ALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGG 510

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

FB|FBgn0032763 CG17568 [Drosophila melanogaster (taxid:7227)]

 Score = 279 (103.3 bits), Expect = 8.1e-24, P = 8.1e-24
 Identities = 50/103 (48%), Positives = 64/103 (62%)

Query:     5 FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSK 64
             FK + RLK H   H E  + C  C  KL TRRT  MH VVH + +  +C  CG  F+RSK
Sbjct:   378 FKNRARLKAHYQIHAEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSK 437

Query:    65 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELK 107
              LK H   HTG RPY C +C ++FA  +NCRSHK + HP+E++
Sbjct:   438 TLKTHLLSHTGLRPYVCNYCGKSFACNANCRSHKLKKHPQEVQ 480

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

FB|FBgn0001990 wek "weckle" [Drosophila melanogaster (taxid:7227)]

 Score = 262 (97.3 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 47/100 (47%), Positives = 59/100 (59%)

Query:     5 FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSK 64
             FK K RL++H  THGE  + C  C  KL TR  L  H  VH D + ++C  CG   + S 
Sbjct:   337 FKNKARLRVHSQTHGEPKFECNVCGKKLQTRAILNKHKYVHTDERRFKCEVCGSGCKNST 396

Query:    65 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 104
              LK H   HTG RPY C +C + FA+ +NCRSHK + HPE
Sbjct:   397 ALKIHLLGHTGLRPYVCKYCGKAFASNTNCRSHKWKKHPE 436

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS;IDA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0007311 "maternal specification of dorsal/ventral axis, oocyte, germ-line encoded" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009950 "dorsal/ventral axis specification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0008063 "Toll signaling pathway" evidence=IMP

UNIPROTKB|H9KZ43 H9KZ43 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 245 (91.3 bits), Expect = 9.2e-21, P = 9.2e-21
 Identities = 49/132 (37%), Positives = 67/132 (50%)

Query:     5 FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
             FKTK+ LKLH   H GE PY C  C     +   L  H  +H   + +QC  CGKSF+RS
Sbjct:   130 FKTKFELKLHQRIHTGERPYKCSECGKGFKSNSNLTCHHRIHTGERPFQCPECGKSFKRS 189

Query:    64 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE--LKLYESSLGIVHKEKK 121
              +LK HH +HTG+RP+ C  C ++F   +    H+R +H  E   K  E   G     + 
Sbjct:   190 SELKQHHRIHTGQRPFQCSECGKSFKRRAKLTRHQR-IHTGERPFKCSECGKGFKRSCEL 248

Query:   122 KFDVSLHPPPQP 133
             K    +H   +P
Sbjct:   249 KLHQRIHTGERP 260

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9L089 H9L089 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 43/96 (44%), Positives = 58/96 (60%)

Query:     5 FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
             FKTK+ LKLH   H GE PY C  C     +   L  H  +H   + +QC  CGKSF+RS
Sbjct:   226 FKTKFELKLHQRIHTGERPYKCSECGKGFKSNSNLTCHHRIHTGERPFQCPECGKSFKRS 285

Query:    64 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
              +LK HH +HTG+RP+ C  C+++F   S+  +HKR
Sbjct:   286 SELKQHHPIHTGQRPFQCLECAKSFKRRSHLNTHKR 321

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9L2R2 H9L2R2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 43/96 (44%), Positives = 58/96 (60%)

Query:     5 FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
             FKTK+ LKLH   H GE PY C  C     +   L  H  +H   + +QC  CGKSF+RS
Sbjct:   214 FKTKFELKLHQRIHTGERPYKCSECGKGFKSNSNLTCHHRIHTGERPFQCPECGKSFKRS 273

Query:    64 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
              +LK HH +HTG+RP+ C  C+++F   S+  +HKR
Sbjct:   274 SELKQHHPIHTGQRPFQCLECAKSFKRRSHLNTHKR 309

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9L2R3 H9L2R3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 43/96 (44%), Positives = 58/96 (60%)

Query:     5 FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
             FKTK+ LKLH   H GE PY C  C     +   L  H  +H   + +QC  CGKSF+RS
Sbjct:   255 FKTKFELKLHQRIHTGERPYKCSECGKGFKSNSNLTCHHRIHTGERPFQCPECGKSFKRS 314

Query:    64 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
              +LK HH +HTG+RP+ C  C+++F   S+  +HKR
Sbjct:   315 SELKQHHPIHTGQRPFQCLECAKSFKRRSHLNTHKR 350

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|2323809 Zfp628 "zinc finger protein 628" [Rattus norvegicus (taxid:10116)]

 Score = 237 (88.5 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
 Identities = 43/100 (43%), Positives = 54/100 (54%)

Query:     5 FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
             FK     + HL  H GE PY CP CP       +LR H  VH   + Y C  CGKSF +S
Sbjct:   127 FKWSSHYQYHLRQHTGERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYSCSICGKSFTQS 186

Query:    64 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHP 103
              +L+ H  +HTG+RP+ CP C +TF + SN   H R   P
Sbjct:   187 TNLRQHQRVHTGERPFRCPLCPKTFTHSSNLLLHHRTHSP 226

GO:0003677 "DNA binding" evidence=IEA;ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-071004-59 zgc:173620 "zgc:173620" [Danio rerio (taxid:7955)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 46/132 (34%), Positives = 67/132 (50%)

Query:     5 FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
             F  K+ LK+H+  H GE PY C  C    N    L  H+++H   K ++C  CGKSF RS
Sbjct:    75 FGRKHNLKIHMRIHTGEKPYTCNQCGKSFNQSSNLYNHMMIHTGEKPFKCTQCGKSFNRS 134

Query:    64 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKKF 123
              DL  H  +HTG++P+TC  C ++F   S+   H R +H  E     S  G   ++   F
Sbjct:   135 SDLHQHMRIHTGEKPFTCTQCGKSFYCSSHLHQHMR-IHTGEKPFTCSQCGKSFRQSSNF 193

Query:   124 D--VSLHPPPQP 133
                + +H   +P
Sbjct:   194 KQHMRIHTEEKP 205

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
KOG2462|consensus	279		99.92
KOG2462|consensus	279		99.9
KOG1074|consensus	958		99.74
KOG1074|consensus	958		99.71
KOG3576|consensus	267		99.67
KOG3576|consensus	267		99.66
KOG3623|consensus	1007		99.63
KOG3623|consensus	1007		99.59
KOG3608|consensus	467		99.56
KOG3608|consensus	467		99.54
PHA00733	128	hypothetical protein	99.36
PLN03086	567	PRLI-interacting factor K; Provisional	99.2
PHA00733	128	hypothetical protein	99.16
PHA02768	55	hypothetical protein; Provisional	99.07
PHA02768	55	hypothetical protein; Provisional	99.06
PLN03086	567	PRLI-interacting factor K; Provisional	98.91
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.87
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.8
PHA00616	44	hypothetical protein	98.71
KOG3993|consensus	500		98.62
KOG3993|consensus	500		98.6
PHA00732	79	hypothetical protein	98.52
PHA00616	44	hypothetical protein	98.49
PHA00732	79	hypothetical protein	98.41
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.26
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.17
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.08
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.05
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.04
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.99
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.91
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.91
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.89
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.86
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.81
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.79
smart00355	26	ZnF_C2H2 zinc finger.	97.4
KOG1146|consensus	1406		97.16
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.16
smart00355	26	ZnF_C2H2 zinc finger.	97.08
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.04
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.99
PRK04860	160	hypothetical protein; Provisional	96.94
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.93
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.88
PRK04860	160	hypothetical protein; Provisional	96.77
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.52
KOG4173|consensus	253		96.48
KOG1146|consensus	1406		96.42
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.41
KOG2482|consensus	423		96.2
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.01
KOG2893|consensus	341		95.88
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.56
KOG2482|consensus	423		95.23
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.1
COG5048	467	FOG: Zn-finger [General function prediction only]	94.32
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.15
KOG2231|consensus	669		94.14
KOG2231|consensus	669		94.06
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.05
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.71
COG4049	65	Uncharacterized protein containing archaeal-type C	93.19
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.07
KOG2186|consensus	276		92.38
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.24
KOG2893|consensus	341		92.13
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.88
COG4049	65	Uncharacterized protein containing archaeal-type C	90.71
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	90.64
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.39
COG5048	467	FOG: Zn-finger [General function prediction only]	90.2
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.95
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	89.75
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	89.15
COG1592	166	Rubrerythrin [Energy production and conversion]	88.68
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	88.55
KOG2785|consensus	390		88.26
PRK06266	178	transcription initiation factor E subunit alpha; V	88.16
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	87.99
PF15135	278	UPF0515: Uncharacterised protein UPF0515	87.26
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	86.74
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	86.44
smart00531	147	TFIIE Transcription initiation factor IIE.	86.3
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	85.83
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.53
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	84.29
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	83.68
KOG2186|consensus	276		83.11
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	83.06
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	82.83
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	82.33
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	81.8
PRK06266	178	transcription initiation factor E subunit alpha; V	81.5

>KOG2462|consensus

Probab=99.92  E-value=1.1e-25  Score=155.01  Aligned_cols=117  Identities=30%  Similarity=0.547  Sum_probs=104.4

Q ss_pred             CCCCCHHHHHHHHHhh----CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCC
Q psy16923          3 SRFKTKYRLKLHLDTH----GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRP   78 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   78 (159)
                      |.+.+.++|.+|.++|    ..+.+.|+.|++.|.+...|..|+++|.  -+++|.+||+.|.+...|+.|+|.|+|+||
T Consensus       138 k~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP  215 (279)
T KOG2462|consen  138 KSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKP  215 (279)
T ss_pred             cccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCC
Confidence            5677888999999999    4788999999999999999999999997  688999999999999999999999999999


Q ss_pred             cccccCcccccCchhHHHhHHhhCCchhhhhhhccccccccccc
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKK  122 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~  122 (159)
                      |.|+.|++.|.++++|+.|+++|-. .....|..|+..+....-
T Consensus       216 F~C~hC~kAFADRSNLRAHmQTHS~-~K~~qC~~C~KsFsl~Sy  258 (279)
T KOG2462|consen  216 FSCPHCGKAFADRSNLRAHMQTHSD-VKKHQCPRCGKSFALKSY  258 (279)
T ss_pred             ccCCcccchhcchHHHHHHHHhhcC-CccccCcchhhHHHHHHH
Confidence            9999999999999999999997654 447778887776664433

>KOG2462|consensus

Probab=99.90  E-value=3e-24  Score=147.90  Aligned_cols=98  Identities=28%  Similarity=0.570  Sum_probs=92.2

Q ss_pred             CCCCCHHHHHHHHHhhCCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923          3 SRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |.|..-..|+.|+|+|+ .++.|.+||+.|.+..-|+.|+|+|+|++||.|..|++.|.+.++|..|+++|.+.+.|.|.
T Consensus       169 K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~  247 (279)
T KOG2462|consen  169 KVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCP  247 (279)
T ss_pred             ceeeehHHHhhHhhccC-CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCc
Confidence            45666778999999995 78999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcccccCchhHHHhHHhh
Q psy16923         83 WCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        83 ~C~~~f~~~~~l~~H~~~~  101 (159)
                      .|++.|...+.|.+|.+..
T Consensus       248 ~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  248 RCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             chhhHHHHHHHHHHhhhhc
Confidence            9999999999999998743

>KOG1074|consensus

Probab=99.74  E-value=5.2e-19  Score=137.11  Aligned_cols=56  Identities=29%  Similarity=0.619  Sum_probs=51.6

Q ss_pred             eeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCchh
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL  106 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  106 (159)
                      -.|..|.++..-.+.|+.|.|.|+|++||+|.+||+.|.++.+|+.|+-.|.....
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~  661 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPP  661 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcc
Confidence            57999999999999999999999999999999999999999999999987665443

>KOG1074|consensus

Probab=99.71  E-value=3.6e-18  Score=132.54  Aligned_cols=54  Identities=31%  Similarity=0.624  Sum_probs=50.9

Q ss_pred             eeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      ..|.+|++.|.+.++|+.|+++|++++||.|..|++.|.++.+|+.||.+|+-.
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~  933 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWV  933 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhcccccc
Confidence            679999999999999999999999999999999999999999999999977643

>KOG3576|consensus

Probab=99.67  E-value=1.3e-17  Score=110.60  Aligned_cols=86  Identities=36%  Similarity=0.739  Sum_probs=68.5

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHH
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      ...|.|..|++.|....-|.+|++.|...+.+.|..||++|-..-+|++|+|.|+|.+||+|..|++.|+.+-.|..|.+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            45577888888888888888888888777777888888888888888888888888888888888888888888888888


Q ss_pred             hhCCch
Q psy16923        100 RMHPEE  105 (159)
Q Consensus       100 ~~h~~~  105 (159)
                      .+|+..
T Consensus       195 kvhgv~  200 (267)
T KOG3576|consen  195 KVHGVQ  200 (267)
T ss_pred             HHcCch
Confidence            777543

>KOG3576|consensus

Probab=99.66  E-value=3e-17  Score=108.82  Aligned_cols=106  Identities=25%  Similarity=0.426  Sum_probs=95.3

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCC------
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG------   75 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------   75 (159)
                      |+|+-...|.+|++.| ..+.|.|..||++|...-+|.+|+|+|+|.+||+|..|++.|...-.|..|.+.-+|      
T Consensus       125 K~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~ya  204 (267)
T KOG3576|consen  125 KKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYA  204 (267)
T ss_pred             hhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHH
Confidence            6788899999999999 579999999999999999999999999999999999999999999999999876333      


Q ss_pred             -----CCCcccccCcccccCchhHHHhHHhhCCchhhh
Q psy16923         76 -----KRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  108 (159)
Q Consensus        76 -----~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  108 (159)
                           .+.|.|..||+.-.+...+..|+..+|+.....
T Consensus       205 ykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spal  242 (267)
T KOG3576|consen  205 YKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPAL  242 (267)
T ss_pred             HHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHHH
Confidence                 356899999999999999999999999776433

>KOG3623|consensus

Probab=99.63  E-value=3.4e-16  Score=120.31  Aligned_cols=94  Identities=30%  Similarity=0.737  Sum_probs=85.0

Q ss_pred             HHHHHHHHh-h--CCCcccCCCCcccCCCHHHHHHHHHhcCC-------------CCceeccccccccCCHHhHHhHHhh
Q psy16923          9 YRLKLHLDT-H--GETPYGCPHCPMKLNTRRTLRMHLVVHRD-------------TKAYQCVTCGKSFRRSKDLKNHHNL   72 (159)
Q Consensus         9 ~~l~~H~~~-h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------~~~~~C~~C~~~f~~~~~l~~H~~~   72 (159)
                      -.|+.|+++ |  .+.-|.|..|..+|.++..|.+||..|..             .+.|+|..|++.|..+-.|+.|+|.
T Consensus       224 tslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRI  303 (1007)
T KOG3623|consen  224 TSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRI  303 (1007)
T ss_pred             HHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhhee
Confidence            458999988 6  57889999999999999999999998853             3569999999999999999999999


Q ss_pred             cCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.|++||.|+.|+++|........|+....
T Consensus       304 HSGEKPfeCpnCkKRFSHSGSySSHmSSKK  333 (1007)
T KOG3623|consen  304 HSGEKPFECPNCKKRFSHSGSYSSHMSSKK  333 (1007)
T ss_pred             ecCCCCcCCcccccccccCCcccccccccc
Confidence            999999999999999999999999987443

>KOG3623|consensus

Probab=99.59  E-value=2.7e-16  Score=120.84  Aligned_cols=81  Identities=27%  Similarity=0.727  Sum_probs=78.3

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhH
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHK   98 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   98 (159)
                      .+..|.|+.|+++|-..+.|.+|--.|+|.+||.|..|.+.|..+-.|+.|.|.|.|++||.|+.|+++|........||
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             H
Q psy16923         99 R   99 (159)
Q Consensus        99 ~   99 (159)
                      .
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            7

>KOG3608|consensus

Probab=99.56  E-value=1.1e-15  Score=109.10  Aligned_cols=97  Identities=28%  Similarity=0.597  Sum_probs=69.0

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCC--CCce--------------------------ec
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRD--TKAY--------------------------QC   53 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~--------------------------~C   53 (159)
                      +.|+++.+|++|+|.| ++|...|+.|+..|.++..|..|.+..+.  ..+|                          +|
T Consensus       187 ~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykC  266 (467)
T KOG3608|consen  187 KHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKC  266 (467)
T ss_pred             hhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccc
Confidence            5688999999999999 89999999999999999999999876542  3344                          45


Q ss_pred             cccccccCCHHhHHhHHhh-cCCCCCcccccCcccccCchhHHHhHH
Q psy16923         54 VTCGKSFRRSKDLKNHHNL-HTGKRPYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        54 ~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      +.|+-+....+.|..|++. |...+||+|+.|.+.|.+.+.|.+|..
T Consensus       267 plCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~  313 (467)
T KOG3608|consen  267 PLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ  313 (467)
T ss_pred             cccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH
Confidence            5555555555555555554 555556666666666666666666655

>KOG3608|consensus

Probab=99.54  E-value=4.3e-15  Score=106.02  Aligned_cols=72  Identities=33%  Similarity=0.646  Sum_probs=56.0

Q ss_pred             CCCCCCHHHHHHHHHhhCCCcccCCCCcccCCCHHHHHHHHH-hcCCCCceeccccccccCCHHhHHhHHhhcC
Q psy16923          2 FSRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLV-VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHT   74 (159)
Q Consensus         2 ~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   74 (159)
                      ||+|.+..-|+.|++.| -.-|+|+.|+++....+.|.+|++ .|...+||+|+.|+..+.+.++|+.|...|.
T Consensus       244 ~KrFaTeklL~~Hv~rH-vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  244 FKRFATEKLLKSHVVRH-VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHhHHHHHHHHHHHh-hhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            67788888888888777 445778888888888888888877 4777788888888888888888888877664

>PHA00733 hypothetical protein

Probab=99.36  E-value=9e-13  Score=83.73  Aligned_cols=84  Identities=20%  Similarity=0.326  Sum_probs=71.9

Q ss_pred             CCCcccCCCCcccCCCHHHHHHH--HH---hcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchh
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMH--LV---VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSN   93 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   93 (159)
                      .++++.|.+|...|.....|..+  ++   .+.+.++|.|..|++.|.+...|..|++.|  ..++.|..|++.|.....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHH
Confidence            47889999999999888777776  22   234578999999999999999999999976  356999999999999999


Q ss_pred             HHHhHHhhCCc
Q psy16923         94 CRSHKRRMHPE  104 (159)
Q Consensus        94 l~~H~~~~h~~  104 (159)
                      |..|+...|+.
T Consensus       115 L~~H~~~~h~~  125 (128)
T PHA00733        115 TLDHVCKKHNI  125 (128)
T ss_pred             HHHHHHHhcCc
Confidence            99999988864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.20  E-value=6.3e-11  Score=91.18  Aligned_cols=91  Identities=21%  Similarity=0.497  Sum_probs=56.6

Q ss_pred             HHHHHHHHHhhCCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccC----------CHHhHHhHHhhcCCCC
Q psy16923          8 KYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFR----------RSKDLKNHHNLHTGKR   77 (159)
Q Consensus         8 ~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~   77 (159)
                      ...|..|++.| .+++.|+ |++.+ .+..|..|++.|.+.+++.|..|+..+.          ....|+.|.... +.+
T Consensus       465 ~s~LekH~~~~-Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~r  540 (567)
T PLN03086        465 QGEMEKHMKVF-HEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSR  540 (567)
T ss_pred             hHHHHHHHHhc-CCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCc
Confidence            45566777665 3667776 76544 4566777766666667777777776663          123566666653 666


Q ss_pred             CcccccCcccccCchhHHHhHHhhCC
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      ++.|..||+.+..+ .+..|+..+|.
T Consensus       541 t~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        541 TAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             ceEccccCCeeeeh-hHHHHHHHhhc
Confidence            67777777666544 45666666553

>PHA00733 hypothetical protein

Probab=99.16  E-value=8.5e-11  Score=74.70  Aligned_cols=64  Identities=27%  Similarity=0.535  Sum_probs=55.2

Q ss_pred             HHHHHHHhhCCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923         10 RLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        10 ~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      .|.+|+..+++++|.|+.|++.|.+...|..|++.+  ..++.|..|++.|.....|..|+...++
T Consensus        61 ~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         61 YLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            355565556899999999999999999999999976  3568999999999999999999987554

>PHA02768 hypothetical protein; Provisional

Probab=99.07  E-value=6.6e-11  Score=62.96  Aligned_cols=42  Identities=21%  Similarity=0.485  Sum_probs=24.0

Q ss_pred             eeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhH
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNC   94 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   94 (159)
                      |.|+.||+.|.+.+.|..|++.|+  ++++|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            456666666666666666666655  455666666655544443

>PHA02768 hypothetical protein; Provisional

Probab=99.06  E-value=8.2e-11  Score=62.60  Aligned_cols=44  Identities=23%  Similarity=0.440  Sum_probs=39.4

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHH
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLK   67 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   67 (159)
                      -|.|+.||+.|.+.++|..|+++|.  +++.|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999998  6889999999998776553

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.91  E-value=2.8e-09  Score=82.30  Aligned_cols=89  Identities=18%  Similarity=0.350  Sum_probs=71.1

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccC---------
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFAN---------   90 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~---------   90 (159)
                      ++.+.|+.|++.|. ...|..|++.++  +++.|. |+..+ ....|..|+..|.+.+++.|..|++.|..         
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d  525 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRD  525 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhh
Confidence            35678999999996 678999999985  789999 99755 66899999999999999999999999852         


Q ss_pred             -chhHHHhHHhhCCchhhhhhhcccc
Q psy16923         91 -GSNCRSHKRRMHPEELKLYESSLGI  115 (159)
Q Consensus        91 -~~~l~~H~~~~h~~~~~~~~~~~~~  115 (159)
                       ...|..|....  ......|..|+.
T Consensus       526 ~~s~Lt~HE~~C--G~rt~~C~~Cgk  549 (567)
T PLN03086        526 RLRGMSEHESIC--GSRTAPCDSCGR  549 (567)
T ss_pred             hhhhHHHHHHhc--CCcceEccccCC
Confidence             34788998864  333455555543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.87  E-value=9.3e-10  Score=50.26  Aligned_cols=23  Identities=48%  Similarity=1.078  Sum_probs=12.5

Q ss_pred             HHHHHHhh-CCCcccCCCCcccCC
Q psy16923         11 LKLHLDTH-GETPYGCPHCPMKLN   33 (159)
Q Consensus        11 l~~H~~~h-~~~~~~C~~C~~~f~   33 (159)
                      |.+|+++| +++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            45555555 455555555555553

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.80  E-value=3e-09  Score=48.57  Aligned_cols=24  Identities=46%  Similarity=1.284  Sum_probs=12.9

Q ss_pred             HHhHHhhcCCCCCcccccCccccc
Q psy16923         66 LKNHHNLHTGKRPYTCPWCSRTFA   89 (159)
Q Consensus        66 l~~H~~~h~~~~~~~C~~C~~~f~   89 (159)
                      |..|++.|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            445555555555555555555553

...

>PHA00616 hypothetical protein

Probab=98.71  E-value=6.3e-09  Score=52.79  Aligned_cols=34  Identities=15%  Similarity=0.282  Sum_probs=24.5

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      ||.|+.||+.|.++++|..|++.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4677777777777777777777777777766654

>KOG3993|consensus

Probab=98.62  E-value=4.8e-09  Score=77.09  Aligned_cols=83  Identities=23%  Similarity=0.450  Sum_probs=60.4

Q ss_pred             ccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCC---------------------------
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG---------------------------   75 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------   75 (159)
                      |.|..|...|.+.-.|.+|.-......-|+|+.|++.|.-..+|..|.|.|..                           
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            67777777777777777775432222346777777777777777777776621                           


Q ss_pred             ------CCCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         76 ------KRPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        76 ------~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                            +..|.|..|++.|.+...|+.|+-.|+...
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence                  123899999999999999999998888544

>KOG3993|consensus

Probab=98.60  E-value=3.3e-08  Score=72.79  Aligned_cols=102  Identities=29%  Similarity=0.622  Sum_probs=77.4

Q ss_pred             CCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCC---------------------------------CCc
Q psy16923          5 FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRD---------------------------------TKA   50 (159)
Q Consensus         5 f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------------~~~   50 (159)
                      |-+.-.|.+|.-.- -..-|.|++|+++|....+|..|+|.|..                                 ..-
T Consensus       277 YeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi  356 (500)
T KOG3993|consen  277 YEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGI  356 (500)
T ss_pred             hhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCce
Confidence            44445566665221 12349999999999999999999988831                                 112


Q ss_pred             eeccccccccCCHHhHHhHHhhcCCC------------------------------------------------------
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNLHTGK------------------------------------------------------   76 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~h~~~------------------------------------------------------   76 (159)
                      |.|..|++.|.+...|..|+..|...                                                      
T Consensus       357 ~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~  436 (500)
T KOG3993|consen  357 FSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYD  436 (500)
T ss_pred             eecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCCC
Confidence            88999999999999999997765311                                                      


Q ss_pred             --------------------CCcccccCcccccCchhHHHhHHhhCCchh
Q psy16923         77 --------------------RPYTCPWCSRTFANGSNCRSHKRRMHPEEL  106 (159)
Q Consensus        77 --------------------~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  106 (159)
                                          ..|.|.+|.-.|.+..+|.+|....|..+.
T Consensus       437 ~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse~  486 (500)
T KOG3993|consen  437 GSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSEL  486 (500)
T ss_pred             CCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHHh
Confidence                                007899999999999999999998887664

>PHA00732 hypothetical protein

Probab=98.52  E-value=1.2e-07  Score=55.02  Aligned_cols=48  Identities=29%  Similarity=0.528  Sum_probs=38.2

Q ss_pred             cccCCCCcccCCCHHHHHHHHHh-cCCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVV-HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      ||.|..|++.|.+..+|..|++. |.+   +.|+.|++.|.   .+..|++.+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---ChhhhhcccCC
Confidence            58899999999999999999885 543   47999999987   47778765543

>PHA00616 hypothetical protein

Probab=98.49  E-value=5.4e-08  Score=49.39  Aligned_cols=34  Identities=29%  Similarity=0.594  Sum_probs=28.6

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      ||+|..||+.|.....|..|++.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5788888888888888888888888888887765

>PHA00732 hypothetical protein

Probab=98.41  E-value=2.3e-07  Score=53.91  Aligned_cols=47  Identities=26%  Similarity=0.491  Sum_probs=39.2

Q ss_pred             ceeccccccccCCHHhHHhHHhh-cCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNL-HTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      ||.|..|++.|.+...|..|++. |.+   +.|+.|++.|.   .|..|.++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---ChhhhhcccC
Confidence            57899999999999999999985 553   68999999997   4788886443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.26  E-value=1.8e-06  Score=46.54  Aligned_cols=49  Identities=29%  Similarity=0.536  Sum_probs=23.9

Q ss_pred             eeccccccccCCHHhHHhHHhh-cCC-CCCcccccCcccccCchhHHHhHHhhC
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNL-HTG-KRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.|+.|++ ..+...|..|... |.. .+.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            45555555 3344555555443 332 23455666555433  25556655544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.17  E-value=9.2e-07  Score=38.96  Aligned_cols=22  Identities=27%  Similarity=0.748  Sum_probs=14.1

Q ss_pred             ccCCCCcccCCCHHHHHHHHHh
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.08  E-value=8.5e-06  Score=43.91  Aligned_cols=50  Identities=26%  Similarity=0.472  Sum_probs=38.8

Q ss_pred             cccCCCCcccCCCHHHHHHHHHh-cCC-CCceeccccccccCCHHhHHhHHhhcC
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVV-HRD-TKAYQCVTCGKSFRRSKDLKNHHNLHT   74 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~   74 (159)
                      .|.|+.|++ ..+...|..|... |.. .+.+.|+.|...+.  ..|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            489999999 5567789999875 544 35689999998644  48999988754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.05  E-value=2.7e-06  Score=37.44  Aligned_cols=22  Identities=45%  Similarity=1.062  Sum_probs=13.9

Q ss_pred             cccccCcccccCchhHHHhHHh
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.04  E-value=2.8e-06  Score=51.58  Aligned_cols=74  Identities=22%  Similarity=0.407  Sum_probs=22.0

Q ss_pred             cCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         24 GCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        24 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      .|..|+..|.+...|..|+...++...   . ....+.....+..+.+... ...+.|..|++.|.+...|..|++.++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Ccccccccccccccccccccccccccc---c-ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            489999999999999999986554221   1 1112223334444443322 236999999999999999999999654

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.99  E-value=4.6e-06  Score=36.87  Aligned_cols=24  Identities=38%  Similarity=0.902  Sum_probs=14.2

Q ss_pred             cccccCcccccCchhHHHhHHhhC
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.|++|++.|.+...|..|++.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666554

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.91  E-value=3.6e-06  Score=60.26  Aligned_cols=51  Identities=29%  Similarity=0.754  Sum_probs=34.3

Q ss_pred             Cceeccc--cccccCCHHhHHhHHhh-c------------------CCCCCcccccCcccccCchhHHHhHH
Q psy16923         49 KAYQCVT--CGKSFRRSKDLKNHHNL-H------------------TGKRPYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        49 ~~~~C~~--C~~~f~~~~~l~~H~~~-h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      +||+|++  |++.+.+...|+.|+.. |                  ...+||+|.+|+++++.-..|+-|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            5555554  55555555555555443 2                  23478999999999999989888875

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.91  E-value=7.9e-06  Score=36.05  Aligned_cols=23  Identities=30%  Similarity=0.816  Sum_probs=13.6

Q ss_pred             ccCCCCcccCCCHHHHHHHHHhc
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666654

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.89  E-value=6.2e-06  Score=42.85  Aligned_cols=39  Identities=28%  Similarity=0.498  Sum_probs=22.1

Q ss_pred             HHHHHhh--CCCcccCCCCcccCCCHHHHHHHHHhcCCCCc
Q psy16923         12 KLHLDTH--GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKA   50 (159)
Q Consensus        12 ~~H~~~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   50 (159)
                      ..+.+.+  ++.|..|++|+..+.+..+|.+|+..+++.+|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            5555555  57788888888888888888888877666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.86  E-value=7.2e-06  Score=37.53  Aligned_cols=24  Identities=29%  Similarity=0.665  Sum_probs=13.8

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhc
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      +|.|..|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            355566666666666666665554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.81  E-value=5.9e-06  Score=59.17  Aligned_cols=53  Identities=32%  Similarity=0.775  Sum_probs=45.6

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHHHh-c------------------CCCCceeccccccccCCHHhHHhHHh
Q psy16923         19 GETPYGCPH--CPMKLNTRRTLRMHLVV-H------------------RDTKAYQCVTCGKSFRRSKDLKNHHN   71 (159)
Q Consensus        19 ~~~~~~C~~--C~~~f~~~~~l~~H~~~-h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~   71 (159)
                      .+|||+|++  |++.++....|..|+.- |                  ...+||.|.+|++.+.+...|+.|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            469999987  99999999999999753 3                  12488999999999999999999975

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.79  E-value=1.3e-05  Score=36.67  Aligned_cols=24  Identities=38%  Similarity=0.689  Sum_probs=14.1

Q ss_pred             cccccCcccccCchhHHHhHHhhC
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.|..|++.|.+..+|..|++.++
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            556666666666666666665443

>smart00355 ZnF_C2H2 zinc finger

Probab=97.40  E-value=0.00021  Score=31.81  Aligned_cols=24  Identities=29%  Similarity=0.801  Sum_probs=17.1

Q ss_pred             ccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467777777777777777777553

>KOG1146|consensus

Probab=97.16  E-value=0.00049  Score=57.96  Aligned_cols=100  Identities=24%  Similarity=0.363  Sum_probs=74.2

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHh-cC------------------------CCCceeccccccccCCHHhHHhHHhh-
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVV-HR------------------------DTKAYQCVTCGKSFRRSKDLKNHHNL-   72 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~-   72 (159)
                      ..+.|.|+.|+..|+....|..|||. |.                        +.++|.|..|...+..+..|..|+.. 
T Consensus       462 ~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~  541 (1406)
T KOG1146|consen  462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSD  541 (1406)
T ss_pred             ccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHHH
Confidence            35889999999999999999999997 21                        13568999999999999999999773 


Q ss_pred             -cC----------C-------------------------------CCCcccccCcccccCchhHHHhHHhhCCchhhhhh
Q psy16923         73 -HT----------G-------------------------------KRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  110 (159)
Q Consensus        73 -h~----------~-------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  110 (159)
                       |.          +                               .-.|.|..|++...-..+|+.|+..-+.-......
T Consensus       542 ~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s~~p~~~  621 (1406)
T KOG1146|consen  542 LHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSSSPPSLV  621 (1406)
T ss_pred             hhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCCCChHHH
Confidence             20          0                               01289999999988899999998765544443333


Q ss_pred             hccccccc
Q psy16923        111 SSLGIVHK  118 (159)
Q Consensus       111 ~~~~~~~~  118 (159)
                      ....+...
T Consensus       622 Lq~~it~~  629 (1406)
T KOG1146|consen  622 LQQNITSS  629 (1406)
T ss_pred             hhhcchhh
Confidence            33333333

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.16  E-value=0.00022  Score=31.53  Aligned_cols=24  Identities=46%  Similarity=0.944  Sum_probs=15.1

Q ss_pred             cccccCcccccCchhHHHhHHhhCC
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      |+|..|++... ...|..|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777777766 6677777776653

>smart00355 ZnF_C2H2 zinc finger

Probab=97.08  E-value=0.0004  Score=30.83  Aligned_cols=22  Identities=36%  Similarity=0.845  Sum_probs=17.1

Q ss_pred             cccccCcccccCchhHHHhHHh
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      |.|..|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            4677888888888888888774

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.04  E-value=0.00029  Score=31.40  Aligned_cols=20  Identities=30%  Similarity=0.604  Sum_probs=10.1

Q ss_pred             cCCCCcccCCCHHHHHHHHH
Q psy16923         24 GCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        24 ~C~~C~~~f~~~~~l~~H~~   43 (159)
                      .|..|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            44555555555555555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.99  E-value=0.00086  Score=34.98  Aligned_cols=30  Identities=30%  Similarity=0.571  Sum_probs=17.3

Q ss_pred             CCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         75 GKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        75 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      .+.|..|++|+..+....+|++|++..|..
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            455667777777777777777777766654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.94  E-value=0.0006  Score=45.08  Aligned_cols=39  Identities=23%  Similarity=0.625  Sum_probs=32.2

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCc
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANG   91 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   91 (159)
                      -+|.|. |+.   ....+.+|.+.|.++++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            368998 987   566788999999999999999999887654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.93  E-value=0.00066  Score=30.17  Aligned_cols=21  Identities=33%  Similarity=0.771  Sum_probs=11.2

Q ss_pred             eeccccccccCCHHhHHhHHh
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHN   71 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~   71 (159)
                      |.|..|+..|.+...+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.88  E-value=0.00057  Score=30.14  Aligned_cols=22  Identities=41%  Similarity=0.961  Sum_probs=12.9

Q ss_pred             ccCCCCcccCCCHHHHHHHHHhc
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      |.|+.|+.... ...|..|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            45666776666 66677676654

>PRK04860 hypothetical protein; Provisional

Probab=96.77  E-value=0.00072  Score=44.69  Aligned_cols=37  Identities=35%  Similarity=0.756  Sum_probs=27.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCC
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRR   62 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   62 (159)
                      +|.|. |+.   ....+..|.++|.++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            47787 776   55667778888888888888888776654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.52  E-value=0.00068  Score=30.84  Aligned_cols=21  Identities=19%  Similarity=0.577  Sum_probs=10.7

Q ss_pred             ccCCCCcccCCCHHHHHHHHH
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      |.|..|++.|.+...+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG4173|consensus

Probab=96.48  E-value=0.0012  Score=44.69  Aligned_cols=80  Identities=23%  Similarity=0.499  Sum_probs=65.5

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhh-c---------CCCCCccccc--Ccc
Q psy16923         21 TPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNL-H---------TGKRPYTCPW--CSR   86 (159)
Q Consensus        21 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h---------~~~~~~~C~~--C~~   86 (159)
                      ..+.|+.  |.+.|........|..+-++.   .|.+|.+.|.+...|..|+.. |         .|.--|.|-+  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4577987  889999999999998775554   699999999999999999774 3         2334588844  999


Q ss_pred             cccCchhHHHhHHhhCC
Q psy16923         87 TFANGSNCRSHKRRMHP  103 (159)
Q Consensus        87 ~f~~~~~l~~H~~~~h~  103 (159)
                      .|.+..+.+.|+-..|.
T Consensus       155 KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhHHHHhcc
Confidence            99999999999988883

>KOG1146|consensus

Probab=96.42  E-value=0.0028  Score=53.71  Aligned_cols=76  Identities=24%  Similarity=0.427  Sum_probs=60.4

Q ss_pred             CCCCcccCCCHHHHHHHHHh-cCCCCceeccccccccCCHHhHHhHHhh-c------------------------CCCCC
Q psy16923         25 CPHCPMKLNTRRTLRMHLVV-HRDTKAYQCVTCGKSFRRSKDLKNHHNL-H------------------------TGKRP   78 (159)
Q Consensus        25 C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h------------------------~~~~~   78 (159)
                      |..|+..+.++..+..|+.. +...+-+.|+.|+..|.....|-.|+|. |                        .+.++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            44566666677767777653 5566889999999999999999999997 2                        12256


Q ss_pred             cccccCcccccCchhHHHhHHh
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      |.|..|...+....+|..|++.
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence            8999999999999999999873

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.41  E-value=0.0013  Score=29.90  Aligned_cols=21  Identities=19%  Similarity=0.662  Sum_probs=13.1

Q ss_pred             cccccCcccccCchhHHHhHH
Q psy16923         79 YTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=96.20  E-value=0.015  Score=42.67  Aligned_cols=28  Identities=21%  Similarity=0.433  Sum_probs=23.7

Q ss_pred             cccccCcccccCchhHHHhHHhhCCchh
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMHPEEL  106 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~  106 (159)
                      .+|-.|.....+...|..||..+|.-..
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl  307 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDL  307 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhH
Confidence            4899999988889999999999995443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.01  E-value=0.0062  Score=36.59  Aligned_cols=65  Identities=23%  Similarity=0.320  Sum_probs=21.6

Q ss_pred             CCCCHHHHHHHHHh-hCCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhc
Q psy16923          4 RFKTKYRLKLHLDT-HGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLH   73 (159)
Q Consensus         4 ~f~~~~~l~~H~~~-h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   73 (159)
                      .|.+...|..|+.. |+-..-    ....+.....+..+.+... ...+.|..|++.|.+...|..|++.+
T Consensus         8 ~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    8 SFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ----------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccc----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            46778889999955 632111    1111223334444444322 23689999999999999999999974

>KOG2893|consensus

Probab=95.88  E-value=0.0027  Score=44.14  Aligned_cols=49  Identities=24%  Similarity=0.559  Sum_probs=31.4

Q ss_pred             eccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         52 QCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        52 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      .|=.|++.|.....|.+|++.    +.|+|.+|-+..-+...|..|--.+|.+
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhhh
Confidence            356677777777777777663    2377777777666666666665545533

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.56  E-value=0.014  Score=25.95  Aligned_cols=20  Identities=30%  Similarity=0.521  Sum_probs=14.2

Q ss_pred             ccCCCCcccCCCHHHHHHHHH
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      ..|+.|++.| ..+.|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4688888888 5556777765

>KOG2482|consensus

Probab=95.23  E-value=0.022  Score=41.75  Aligned_cols=78  Identities=21%  Similarity=0.388  Sum_probs=60.9

Q ss_pred             ccCCCCcccCCCHHHHHHHHHh--cCCCCc--------------------------------------------------
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVV--HRDTKA--------------------------------------------------   50 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~--h~~~~~--------------------------------------------------   50 (159)
                      +.|-.|.+.|+.+..|..||+.  |..-.|                                                  
T Consensus       196 ~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a  275 (423)
T KOG2482|consen  196 LRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDA  275 (423)
T ss_pred             heeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCC
Confidence            7899999999999999999986  422111                                                  


Q ss_pred             ----eeccccccccCCHHhHHhHHhh-cCCC--------------------------CCcccccCcccccCchhHHHhHH
Q psy16923         51 ----YQCVTCGKSFRRSKDLKNHHNL-HTGK--------------------------RPYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        51 ----~~C~~C~~~f~~~~~l~~H~~~-h~~~--------------------------~~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                          ..|-.|.....+...|..||+. |.-.                          +.-.|-.|.-.|.....|..|+.
T Consensus       276 ~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  276 EALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             CccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence                3799999988889999999985 4110                          11357789999999999999986


Q ss_pred             h
Q psy16923        100 R  100 (159)
Q Consensus       100 ~  100 (159)
                      .
T Consensus       356 e  356 (423)
T KOG2482|consen  356 E  356 (423)
T ss_pred             c
Confidence            3

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.10  E-value=0.022  Score=27.32  Aligned_cols=23  Identities=17%  Similarity=0.426  Sum_probs=16.6

Q ss_pred             cccCCCCcccCCCHHHHHHHHHh
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46677777777777777777653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.32  E-value=0.012  Score=44.48  Aligned_cols=63  Identities=32%  Similarity=0.549  Sum_probs=50.6

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH--hcCCC--Cceecc--ccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLV--VHRDT--KAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .++.|..|...|.....|..|.+  .|.++  +++.|.  .|++.|.+...+..|...|.+..++.+..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            46788888888888888888888  68888  888888  68888888888888888888777666644

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.15  E-value=0.048  Score=26.06  Aligned_cols=22  Identities=18%  Similarity=0.558  Sum_probs=13.6

Q ss_pred             ceeccccccccCCHHhHHhHHh
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHN   71 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~   71 (159)
                      +|.|..|+..|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3556666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2231|consensus

Probab=94.14  E-value=0.13  Score=41.54  Aligned_cols=21  Identities=24%  Similarity=0.539  Sum_probs=9.8

Q ss_pred             eccccccccCCHHhHHhHHhh
Q psy16923         52 QCVTCGKSFRRSKDLKNHHNL   72 (159)
Q Consensus        52 ~C~~C~~~f~~~~~l~~H~~~   72 (159)
                      .|..|...|.....|..|++.
T Consensus       184 ~C~~C~~~fld~~el~rH~~~  204 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRF  204 (669)
T ss_pred             cchhhhhhhccHHHHHHhhcc
Confidence            344444444444444444443

>KOG2231|consensus

Probab=94.06  E-value=0.098  Score=42.12  Aligned_cols=86  Identities=21%  Similarity=0.392  Sum_probs=55.4

Q ss_pred             CCHHHHHHHHHhh--CCCc----ccCCCCcccCCCHHHHHHHHHhcCCCCceecccc------ccccCCHHhHHhHHhhc
Q psy16923          6 KTKYRLKLHLDTH--GETP----YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC------GKSFRRSKDLKNHHNLH   73 (159)
Q Consensus         6 ~~~~~l~~H~~~h--~~~~----~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~h   73 (159)
                      =++..|.+|++.-  .++-    -.|..|...|....+|..|++.++    |.|..|      +.-|..-+.|..|.+.+
T Consensus       160 Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  160 YTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             ehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhc
Confidence            3456677777664  1211    358889999999999999988654    456666      34566668999999876


Q ss_pred             CCCCCcccc--cCc-ccccCchhHHHhHH
Q psy16923         74 TGKRPYTCP--WCS-RTFANGSNCRSHKR   99 (159)
Q Consensus        74 ~~~~~~~C~--~C~-~~f~~~~~l~~H~~   99 (159)
                      +    |.|.  .|. +.|.....+..+++
T Consensus       236 H----flCE~~~C~~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  236 H----FLCEEEFCRTKKFYVAFELEIELK  260 (669)
T ss_pred             C----ccccccccccceeeehhHHHHHHH
Confidence            5    5665  353 34444434444444

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.05  E-value=0.032  Score=26.57  Aligned_cols=10  Identities=40%  Similarity=1.295  Sum_probs=5.3

Q ss_pred             CCcccccCcc
Q psy16923         77 RPYTCPWCSR   86 (159)
Q Consensus        77 ~~~~C~~C~~   86 (159)
                      .++.|+.|+.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4455666553

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.71  E-value=0.16  Score=31.30  Aligned_cols=83  Identities=20%  Similarity=0.307  Sum_probs=46.5

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHh-cCCCCceeccccccccCCHHhHHh---HHhh-cCC---------CCCccc----
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVV-HRDTKAYQCVTCGKSFRRSKDLKN---HHNL-HTG---------KRPYTC----   81 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~---H~~~-h~~---------~~~~~C----   81 (159)
                      -+...|..|+.+... .++..|++. |+......-..-...+.....|..   .+.. ...         ...|.|    
T Consensus         9 ~~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~   87 (109)
T PF12013_consen    9 YRVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDP   87 (109)
T ss_pred             CCEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCC
Confidence            355679999988776 779999985 432211100000000000000000   0000 000         123899    


Q ss_pred             ccCcccccCchhHHHhHHhhCC
Q psy16923         82 PWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        82 ~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      ..|++.+.+...+..|.+.+|+
T Consensus        88 ~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   88 PHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCCcEeccHHHHHHHHHHhcC
Confidence            9999999999999999998884

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.19  E-value=0.038  Score=29.39  Aligned_cols=26  Identities=31%  Similarity=0.600  Sum_probs=18.7

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHh
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      +|..+.|+.|+..|....++.+|...
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhH
Confidence            56667777777777777777777654

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.07  E-value=0.19  Score=30.99  Aligned_cols=22  Identities=14%  Similarity=0.409  Sum_probs=12.2

Q ss_pred             ceeccccccccCCHHhHHhHHhh
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNL   72 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~   72 (159)
                      ...|..|..+..- +.+..|++.
T Consensus        11 vlIC~~C~~av~~-~~v~~HL~~   32 (109)
T PF12013_consen   11 VLICRQCQYAVQP-SEVESHLRK   32 (109)
T ss_pred             EEEeCCCCcccCc-hHHHHHHHH
Confidence            3456666655433 566666663

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2186|consensus

Probab=92.38  E-value=0.086  Score=37.16  Aligned_cols=47  Identities=28%  Similarity=0.687  Sum_probs=32.9

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHh
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHN   71 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   71 (159)
                      -|.|..||...+-.. +..|+..-++ ..|.|..|+..|.+ .....|..
T Consensus         3 ~FtCnvCgEsvKKp~-vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKPQ-VEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhccccc-hHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            367888887776554 7778776655 56788888888877 55566644

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.24  E-value=0.11  Score=38.36  Aligned_cols=47  Identities=26%  Similarity=0.539  Sum_probs=36.3

Q ss_pred             eccccccccCCHHhHHhHHhhcCCCCCcccccCcc-------cccCchhHHHhHHhhC
Q psy16923         52 QCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSR-------TFANGSNCRSHKRRMH  102 (159)
Q Consensus        52 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~~h  102 (159)
                      .|..|..-|.+-+.|..|+|..+    -.|-+|++       .|.+..+|..|.+..|
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~H----E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h  275 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRH----EACHICDMVGPIRYQYFKSYEDLEAHFRNAH  275 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhh----hhhhhhhccCccchhhhhCHHHHHHHhhcCc
Confidence            69999999999999999998744    24445543       4788888999988666

>KOG2893|consensus

Probab=92.13  E-value=0.048  Score=38.13  Aligned_cols=44  Identities=23%  Similarity=0.411  Sum_probs=37.1

Q ss_pred             cCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHh
Q psy16923         24 GCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHN   71 (159)
Q Consensus        24 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   71 (159)
                      .|-.|++.|....-|.+|++.    +.|+|-.|-+.+.+--.|..|..
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcm   55 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCM   55 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehh
Confidence            488999999999999999885    55899999998888777777744

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.88  E-value=0.84  Score=33.96  Aligned_cols=92  Identities=23%  Similarity=0.410  Sum_probs=61.1

Q ss_pred             HHHHHHHHhh-CC----CcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccc----cccCCHHhHHhHHhhcCCCCCc
Q psy16923          9 YRLKLHLDTH-GE----TPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCG----KSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus         9 ~~l~~H~~~h-~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~----~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      ..|+.|...- .+    .--.|..|+..|=....|..|+|..+. +-+.|+.-+    .-|.+-..|..|.+.-+    |
T Consensus       202 ~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE-~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y  276 (493)
T COG5236         202 STLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHE-ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----Y  276 (493)
T ss_pred             ccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhhh-hhhhhhccCccchhhhhCHHHHHHHhhcCc----e
Confidence            4566666443 22    234599999999999999999997543 333443322    24666778888887533    5


Q ss_pred             cccc--Cc----ccccCchhHHHhHHhhCCch
Q psy16923         80 TCPW--CS----RTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        80 ~C~~--C~----~~f~~~~~l~~H~~~~h~~~  105 (159)
                      .|..  |.    ..|.....|..|+-.-|+..
T Consensus       277 ~ct~qtc~~~k~~vf~~~~el~~h~~~~h~~~  308 (493)
T COG5236         277 CCTFQTCRVGKCYVFPYHTELLEHLTRFHKVN  308 (493)
T ss_pred             EEEEEEEecCcEEEeccHHHHHHHHHHHhhcc
Confidence            5543  32    46889999999998777543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.71  E-value=0.11  Score=27.73  Aligned_cols=29  Identities=24%  Similarity=0.550  Sum_probs=18.1

Q ss_pred             CCCCcccccCcccccCchhHHHhHHhhCC
Q psy16923         75 GKRPYTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        75 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      |+.-+.|+.|+..|....+..+|....|+
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            44456666666666666666666665553

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=90.64  E-value=0.29  Score=32.40  Aligned_cols=18  Identities=11%  Similarity=0.393  Sum_probs=9.1

Q ss_pred             CcccCCCCcccCCCHHHH
Q psy16923         21 TPYGCPHCPMKLNTRRTL   38 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l   38 (159)
                      .-|.|+.|+..|....++
T Consensus       108 ~~Y~Cp~c~~r~tf~eA~  125 (158)
T TIGR00373       108 MFFICPNMCVRFTFNEAM  125 (158)
T ss_pred             CeEECCCCCcEeeHHHHH
Confidence            345555555555555444

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.39  E-value=0.065  Score=37.34  Aligned_cols=13  Identities=23%  Similarity=0.733  Sum_probs=10.2

Q ss_pred             cccccCcccccCc
Q psy16923         79 YTCPWCSRTFANG   91 (159)
Q Consensus        79 ~~C~~C~~~f~~~   91 (159)
                      +.|+.||.++...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5899999987654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.20  E-value=0.08  Score=40.07  Aligned_cols=57  Identities=26%  Similarity=0.574  Sum_probs=51.1

Q ss_pred             CceeccccccccCCHHhHHhHHh--hcCCC--CCcccc--cCcccccCchhHHHhHHhhCCch
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHN--LHTGK--RPYTCP--WCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      .++.|..|...|.....+..|.+  .|.++  +++.|+  .|++.|.+...+..|...+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  350 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSIS  350 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCC
Confidence            36789999999999999999999  79999  999999  79999999999999998766443

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.95  E-value=0.14  Score=31.65  Aligned_cols=30  Identities=33%  Similarity=0.811  Sum_probs=23.6

Q ss_pred             eeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCc
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANG   91 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   91 (159)
                      ..|+.||+.|...           +..|..|++||..|...
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            4799999988773           23678899999988766

The function of members of this family is unknown.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=89.75  E-value=0.2  Score=24.02  Aligned_cols=10  Identities=30%  Similarity=0.879  Sum_probs=5.8

Q ss_pred             eecccccccc
Q psy16923         51 YQCVTCGKSF   60 (159)
Q Consensus        51 ~~C~~C~~~f   60 (159)
                      |.|..||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            5666666543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=89.15  E-value=0.28  Score=23.96  Aligned_cols=13  Identities=23%  Similarity=0.864  Sum_probs=6.3

Q ss_pred             cCCCCcccCCCHH
Q psy16923         24 GCPHCPMKLNTRR   36 (159)
Q Consensus        24 ~C~~C~~~f~~~~   36 (159)
                      .|+.|+..|.-..
T Consensus         4 ~CP~C~~~f~v~~   16 (37)
T PF13719_consen    4 TCPNCQTRFRVPD   16 (37)
T ss_pred             ECCCCCceEEcCH
Confidence            4555555554333

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=88.68  E-value=0.31  Score=32.49  Aligned_cols=24  Identities=38%  Similarity=1.061  Sum_probs=18.4

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCCCCCcccccCcc
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSR   86 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   86 (159)
                      .|.|.+||..             +.++.|.+|++||-
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCCC
Confidence            5899999754             44577889999983

>TIGR00622 ssl1 transcription factor ssl1

Probab=88.55  E-value=0.65  Score=28.79  Aligned_cols=81  Identities=21%  Similarity=0.326  Sum_probs=51.0

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCCCc------------eeccccccccCCHHhHHhHHhhcCCCCCcccccCccc
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKA------------YQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRT   87 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   87 (159)
                      +-|-.|+.|+...-....|.+...---.-++            -.|..|...|........-  .-.....|.|+.|...
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~--~~~~~~~y~C~~C~~~   90 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD--ELKDSHRYVCAVCKNV   90 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCccccccc--ccccccceeCCCCCCc
Confidence            5688999999988888888764221111111            2488899888764311100  0122345899999999


Q ss_pred             ccCchhHHHhHHhhC
Q psy16923         88 FANGSNCRSHKRRMH  102 (159)
Q Consensus        88 f~~~~~l~~H~~~~h  102 (159)
                      |=..-+.-.|...|.
T Consensus        91 FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        91 FCVDCDVFVHESLHC  105 (112)
T ss_pred             cccccchhhhhhccC
Confidence            887777777766543

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2785|consensus

Probab=88.26  E-value=0.7  Score=34.72  Aligned_cols=28  Identities=18%  Similarity=0.288  Sum_probs=23.7

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      ..|-.|-.|+..+++...-..||..+++
T Consensus       164 ~~Pt~CLfC~~~~k~~e~~~~HM~~~Hg  191 (390)
T KOG2785|consen  164 LIPTDCLFCDKKSKSLEENLKHMFKEHG  191 (390)
T ss_pred             cCCcceeecCCCcccHHHHHHHHhhccC
Confidence            3457799999999999999999988776

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=88.16  E-value=0.48  Score=32.06  Aligned_cols=16  Identities=19%  Similarity=0.484  Sum_probs=7.8

Q ss_pred             ceeccccccccCCHHh
Q psy16923         50 AYQCVTCGKSFRRSKD   65 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~   65 (159)
                      -|.|+.|+..|.....
T Consensus       117 ~Y~Cp~C~~rytf~eA  132 (178)
T PRK06266        117 FFFCPNCHIRFTFDEA  132 (178)
T ss_pred             EEECCCCCcEEeHHHH
Confidence            3555555555444443

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=87.99  E-value=0.44  Score=23.12  Aligned_cols=13  Identities=31%  Similarity=0.838  Sum_probs=6.5

Q ss_pred             cCCCCcccCCCHH
Q psy16923         24 GCPHCPMKLNTRR   36 (159)
Q Consensus        24 ~C~~C~~~f~~~~   36 (159)
                      .|+.|+..|.-.+
T Consensus         4 ~Cp~C~~~y~i~d   16 (36)
T PF13717_consen    4 TCPNCQAKYEIDD   16 (36)
T ss_pred             ECCCCCCEEeCCH
Confidence            4555555554443

>PF15135 UPF0515: Uncharacterised protein UPF0515

Probab=87.26  E-value=0.78  Score=32.45  Aligned_cols=25  Identities=20%  Similarity=0.542  Sum_probs=17.9

Q ss_pred             CCHHHHHHHHHhh-C-----CCcccCCCCcc
Q psy16923          6 KTKYRLKLHLDTH-G-----ETPYGCPHCPM   30 (159)
Q Consensus         6 ~~~~~l~~H~~~h-~-----~~~~~C~~C~~   30 (159)
                      .+..+|+...+++ .     .+.|.|..|+.
T Consensus        90 LTe~Nlrm~d~a~~~~ip~~drqFaC~~Cd~  120 (278)
T PF15135_consen   90 LTEENLRMFDDAQENLIPSVDRQFACSSCDH  120 (278)
T ss_pred             chHHHHHHhhhhhhccccccceeeeccccch
Confidence            3556777777776 2     47899999964

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=86.74  E-value=0.47  Score=23.13  Aligned_cols=10  Identities=30%  Similarity=1.065  Sum_probs=4.5

Q ss_pred             cCCCCcccCC
Q psy16923         24 GCPHCPMKLN   33 (159)
Q Consensus        24 ~C~~C~~~f~   33 (159)
                      .|+.|+..|.
T Consensus         4 ~CP~C~~~~~   13 (38)
T TIGR02098         4 QCPNCKTSFR   13 (38)
T ss_pred             ECCCCCCEEE
Confidence            4444444443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=86.44  E-value=0.095  Score=36.52  Aligned_cols=44  Identities=18%  Similarity=0.476  Sum_probs=29.0

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhc----------CCCCc-----eeccccccccCCH
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVH----------RDTKA-----YQCVTCGKSFRRS   63 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h----------~~~~~-----~~C~~C~~~f~~~   63 (159)
                      ++...|+.|+..|.++.-.....+.-          .+..|     +.|+.||..+...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            46789999999998876444443321          11122     6899999877654

>smart00531 TFIIE Transcription initiation factor IIE

Probab=86.30  E-value=1.1  Score=29.25  Aligned_cols=16  Identities=31%  Similarity=0.710  Sum_probs=8.6

Q ss_pred             CcccCCCCcccCCCHH
Q psy16923         21 TPYGCPHCPMKLNTRR   36 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~   36 (159)
                      .-|.|+.|+..|....
T Consensus        98 ~~Y~Cp~C~~~y~~~e  113 (147)
T smart00531       98 AYYKCPNCQSKYTFLE  113 (147)
T ss_pred             cEEECcCCCCEeeHHH
Confidence            3455666665555433

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=85.83  E-value=0.58  Score=23.66  Aligned_cols=26  Identities=23%  Similarity=0.623  Sum_probs=14.0

Q ss_pred             CCcccccCcccccC----chhHHHhHHhhC
Q psy16923         77 RPYTCPWCSRTFAN----GSNCRSHKRRMH  102 (159)
Q Consensus        77 ~~~~C~~C~~~f~~----~~~l~~H~~~~h  102 (159)
                      ....|..|++.+..    .+.|..|++..|
T Consensus        15 ~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   15 KKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             S-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             CeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            34577777766544    367777775443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.53  E-value=1.3  Score=29.39  Aligned_cols=35  Identities=17%  Similarity=0.488  Sum_probs=27.4

Q ss_pred             CCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCccccc
Q psy16923         46 RDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFA   89 (159)
Q Consensus        46 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   89 (159)
                      ....-|.|+.|+..|....++.         ..|.|+.||....
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEee
Confidence            3456699999999998888874         2599999997643

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=84.29  E-value=0.71  Score=23.54  Aligned_cols=11  Identities=36%  Similarity=0.978  Sum_probs=6.0

Q ss_pred             eeccccccccC
Q psy16923         51 YQCVTCGKSFR   61 (159)
Q Consensus        51 ~~C~~C~~~f~   61 (159)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            45666665543

present in RNA polymerase I, II and III

>smart00614 ZnF_BED BED zinc finger

Probab=83.68  E-value=0.91  Score=23.68  Aligned_cols=24  Identities=38%  Similarity=0.809  Sum_probs=15.4

Q ss_pred             cccccCcccccCc-----hhHHHhHHhhC
Q psy16923         79 YTCPWCSRTFANG-----SNCRSHKRRMH  102 (159)
Q Consensus        79 ~~C~~C~~~f~~~-----~~l~~H~~~~h  102 (159)
                      -.|..|++.+...     +.|.+|++..|
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h   47 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKH   47 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHC
Confidence            4677777666443     57777777444

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>KOG2186|consensus

Probab=83.11  E-value=1  Score=32.02  Aligned_cols=50  Identities=20%  Similarity=0.589  Sum_probs=39.0

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      -|.|..||....- ..+..|+...++ .-|.|--|++.|.. .....|.....
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcc
Confidence            3789999987655 456679887766 55999999999988 56688887554

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=83.06  E-value=0.6  Score=29.52  Aligned_cols=34  Identities=21%  Similarity=0.468  Sum_probs=24.6

Q ss_pred             eeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHH
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCR   95 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   95 (159)
                      ..|+.||+.|...           +..|..|++||..|.....++
T Consensus        10 r~Cp~cg~kFYDL-----------nk~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300        10 RICPNTGSKFYDL-----------NRRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             ccCCCcCcccccc-----------CCCCccCCCcCCccCcchhhc
Confidence            4799999888763           236789999998876664443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=82.83  E-value=0.83  Score=26.85  Aligned_cols=11  Identities=36%  Similarity=1.186  Sum_probs=5.3

Q ss_pred             ceecccccccc
Q psy16923         50 AYQCVTCGKSF   60 (159)
Q Consensus        50 ~~~C~~C~~~f   60 (159)
                      -|.|..|+..|
T Consensus        53 IW~C~kCg~~f   63 (89)
T COG1997          53 IWKCRKCGAKF   63 (89)
T ss_pred             eEEcCCCCCee
Confidence            34555555444

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=82.33  E-value=0.79  Score=31.93  Aligned_cols=32  Identities=28%  Similarity=0.669  Sum_probs=24.1

Q ss_pred             CCCcccccCcccccCchhHHHhHHhhCCchhh
Q psy16923         76 KRPYTCPWCSRTFANGSNCRSHKRRMHPEELK  107 (159)
Q Consensus        76 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  107 (159)
                      +..|.|+.|+|.|.-..-..+|+...|.+...
T Consensus        75 ~~K~~C~lc~KlFkg~eFV~KHI~nKH~e~ve  106 (214)
T PF04959_consen   75 EDKWRCPLCGKLFKGPEFVRKHIFNKHPEKVE  106 (214)
T ss_dssp             SEEEEE-SSS-EESSHHHHHHHHHHH-HHHHH
T ss_pred             CCEECCCCCCcccCChHHHHHHHhhcCHHHHH
Confidence            34589999999999999999999999977653

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=81.80  E-value=1.3  Score=24.00  Aligned_cols=50  Identities=22%  Similarity=0.523  Sum_probs=27.7

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcc
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSR   86 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   86 (159)
                      +-.|..|+....-          -.+...|.|+.||........     +--....+|.|+.||.
T Consensus         9 ~~~CtSCg~~i~p----------~e~~v~F~CPnCGe~~I~Rc~-----~CRk~g~~Y~Cp~CGF   58 (61)
T COG2888           9 PPVCTSCGREIAP----------GETAVKFPCPNCGEVEIYRCA-----KCRKLGNPYRCPKCGF   58 (61)
T ss_pred             CceeccCCCEecc----------CCceeEeeCCCCCceeeehhh-----hHHHcCCceECCCcCc
Confidence            4467777755311          112245789999855433222     1112246799999885

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=81.50  E-value=1.9  Score=29.14  Aligned_cols=33  Identities=18%  Similarity=0.722  Sum_probs=26.1

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFR   61 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   61 (159)
                      ..-|.|+.|+..|....++.         ..|.|+.||....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            46799999999998888764         3689999997544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	159
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-15
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-14
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-11
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		3e-10
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-09
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-09
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-09
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-09
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-09
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-09
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-08
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-08
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		8e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		6e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		7e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		9e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-05
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		5e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		8e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		4e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		4e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		6e-04
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		6e-04
2eon_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F  K  L  H  TH GE PY CP C    + R  LR H   H   K Y C  CGKSF + 
Sbjct: 59  FSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQL 118
Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
             L+ H   HTG++PY CP C ++F+   N  +H+R
Sbjct: 119 AHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR 154

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPY 79
          E PY CP C    +    L+ H   H   K Y+C  CGKSF +S DL+ H   HTG++PY
Sbjct: 2  EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 80 TCPWCSRTFANGSNCRSHKR 99
           CP C ++F+   +   H+R
Sbjct: 62 KCPECGKSFSRSDHLSRHQR 81

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 23  YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP 82
           + C  C        TL  HL++H DT+ Y C  CGK F +  D+K H  +HTG++P+ C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 83  WCSRTFANGSNCRSHKRR 100
            C + F+  SN  +H R+
Sbjct: 62  VCGKAFSQSSNLITHSRK 79

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 5   FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKSFRR 62
           F+    ++ HL THG   + C  C         L+ H +VH   K +QC    CGK F  
Sbjct: 17  FRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSL 76
Query: 63  SKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSH 97
             +L+ H  +HTG RPY CP+  C++ FA  +N +SH
Sbjct: 77  DFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 4   RFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLV---VHRDTKAYQCVTCGKS 59
           +F +KY LK+H   H GE P+ CP C      +  L  H     ++R  + + C  C ++
Sbjct: 16  KFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQET 75
Query: 60  FRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 102
           FRR  +L+ H   HTG+ PY C  CS+ F    + +SH  ++H
Sbjct: 76  FRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 20  ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
           E PY CP   C  + +   +L  H+ +H   K +QC  C ++F RS  L  H   HTG++
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 78  PYTCPWCSRTFANGSNCRSHKRRMH 102
           P+ C  C R FA     RS +R+ H
Sbjct: 62  PFACDICGRKFA-----RSDERKRH 81

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 20  ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
           E PY CP   C  + +    L  H+ +H   K +QC  C ++F RS  L  H   HTG++
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 78  PYTCPWCSRTFANGSNCRSHKRRMH 102
           P+ C  C R FA     RS +R+ H
Sbjct: 62  PFACDICGRKFA-----RSDERKRH 81

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 11  LKLHLDTH-GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLK 67
           L++H   H GE PY C    C  + +    L+ H   H   K +QC TC + F RS  LK
Sbjct: 24  LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK 83
Query: 68  NHHNLHTGKRPYTCPW--CSRTFANGSN 93
            H   HTG++P++C W  C + FA    
Sbjct: 84  THTRTHTGEKPFSCRWPSCQKKFARSDE 111

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          E PY CP   C  + +    L  H+ +H   K +QC  C ++F RS  L  H   HTG++
Sbjct: 2  ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 78 PYTCPWCSRTFANGSNCRSH 97
          P+ C  C R FA     + H
Sbjct: 62 PFACDICGRKFARSDERKRH 81

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          E PY CP   C  + +    L  H+ +H   K +QC  C ++F RS  L  H   HTG++
Sbjct: 2  ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 78 PYTCPWCSRTFANGSNCRSH 97
          P+ C  C R FA     + H
Sbjct: 62 PFACDICGRKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          E PY CP   C  + +    L  H+ +H   K +QC  C ++F RS  L  H   HTG++
Sbjct: 2  ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 78 PYTCPWCSRTFANGSNCRSH 97
          P+ C  C R FA     + H
Sbjct: 62 PFACDICGRKFARSDERKRH 81

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          E PY CP   C  + +    L  H+ +H   K +QC  C ++F RS  L  H   HTG++
Sbjct: 1  ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 78 PYTCPWCSRTFANGSNCRSH 97
          P+ C  C R FA     + H
Sbjct: 61 PFACDICGRKFARSDERKRH 80

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          E PY CP   C  + +    L  H+ +H   K +QC  C ++F RS  L  H   HTG++
Sbjct: 2  ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 78 PYTCPWCSRTFANGSNCRSH 97
          P+ C  C R FA     + H
Sbjct: 62 PFACDICGRKFARSDERKRH 81

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          E PY CP   C  + + +  L  H+ +H   K +QC  C ++F +   L  H   HTG++
Sbjct: 2  ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 78 PYTCPWCSRTFA 89
          P+ C  C R FA
Sbjct: 62 PFACDICGRKFA 73

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          E PY CP   C  + + +  L  H+ +H   K +QC  C ++F +   L  H   HTG++
Sbjct: 2  ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 78 PYTCPWCSRTFA 89
          P+ C  C R FA
Sbjct: 62 PFACDICGRKFA 73

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          K Y CV CGK+F RS  L  H  +HTG++PY C  C + F+  S   +H+R
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 25  CPHCPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCP 82
           CP        +  L  H+ VH   K + C    CGK F RS++LK H   HTG++P+ C 
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 83  W--CSRTFANGSNCRSH 97
           +  C R FAN S+ + H
Sbjct: 125 FEGCDRRFANSSDRKKH 141

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 5   FKTKYRLKLHLDTH-GETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKS 59
           FK +Y L +H+  H GE P+ C    C    +    L+ HL  H   K Y C    C K+
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA 108
Query: 60  FRRSKDLKNHHN-LHTGKRPYTC--PWCSRTFANGSNCRSHKRRMH 102
           F  + D   H N  H+ ++PY C  P C++ + + S+ R H + +H
Sbjct: 109 FSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 46 RDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          R+ + Y+C  CGKSF  S DL  H   HTG++PY C  C + F   S+   H R
Sbjct: 14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 43/102 (42%)
Query: 4   RFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           R K K+     L   G   Y C  C        +LR H  +H   K Y C  C K F  +
Sbjct: 4   RMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLA 63
Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE 105
           +    H   HTG+R Y C  C ++F N     SH + +H ++
Sbjct: 64  EYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD 105

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRP 78
          + PY C  C      +  L  H  VH   K Y+C  CG  F R  +LK H  +H+G++P
Sbjct: 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 23 YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP 82
          + C  C         L +H   H D + Y C  C K+FRR   L++H  +H+ ++P+ C 
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 83 WCSRTFANGSNCRSHK 98
           C + F        HK
Sbjct: 78 ECGKGFCQSRTLAVHK 93

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 49  KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE--L 106
           K + C  CG+ F +S +L  H   HT +RPYTC  C + F    + R H R +H +E   
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKPF 74
Query: 107 KLYESSLGIVHKEKKKFDVSLHPPPQPP 134
           K  E   G           +LH     P
Sbjct: 75  KCQECGKGFCQSRTLAVHKTLHMQTSSP 102

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 49  KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 102
           K +QC  C ++F RS  L  H   HTG++P+ C  C R FA     + H+   H
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 38  LRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCR 95
           L+ HL  H   K Y C    CG  F RS +L  H+  HTG RP+ C  C R F+   +  
Sbjct: 23  LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA 82
Query: 96  SHKRR 100
            H +R
Sbjct: 83  LHMKR 87

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 38  LRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCR 95
           L+ HL  H   K Y C    CG  F RS +L  H+  HTG RP+ C  C R F+   +  
Sbjct: 24  LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA 83
Query: 96  SHKRR 100
            H +R
Sbjct: 84  LHMKR 88

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 26  PHCPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPW 83
           P C         L+ HL  H   K Y+C    C   F RS +L  H+  HTG +P+ C  
Sbjct: 21  PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV 80
Query: 84  CSRTFANGSNCRSHKRR 100
           C+R+F+   +   H +R
Sbjct: 81  CNRSFSRSDHLALHMKR 97

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 5  FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDT--KAYQCVTCGKSFR 61
          F+  Y L  H  +H GE PY CP C ++   +  +  H+  H  +  K Y C +CGK F 
Sbjct: 17 FRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFS 76
Query: 62 RSKDLKNH-HNLHTG 75
          R   L  H   +H+G
Sbjct: 77 RPDHLNGHIKQVHSG 91

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 16 DTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG 75
           + G+  Y C  C      +     H+ +H   + Y C  CGK F+    L  H  +HTG
Sbjct: 4  GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 76 KRPYTCPWCSRTF 88
           +PY C  C++ F
Sbjct: 63 IKPYECNICAKRF 75

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 5  FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
          F  K +LK H+  H G  PY C  C        +L  HL +H D + ++C  C  + R S
Sbjct: 18 FSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS 77
Query: 64 KDLKNHHNLHTG 75
            L  H   HTG
Sbjct: 78 SQLTVHLRSHTG 89

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 52  QCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 102
           +C  CGK FR +  L  H   HTG++PY C +C    A  ++ R H  R H
Sbjct: 6   ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH 56

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 50  AYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL 106
           ++ C  C ++F R + LK H+  HT ++PY C  C+R F        H +++H   L
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 56 CGKSFRRSKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 99
          CGK++ +S  LK H   HTG++P++C W  C R FA       H+R
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 49 KAYQC--VTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          + Y C   +C + F RS +L  H  +HTG++P+ C  C R F+   +  +H R
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70

>pdb|2EON|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 397- 429) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRP 78
          K Y+C  CGK+FR S  L  HH++H+G+RP
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-15
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-13
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-12
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	9e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-04

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 80.3 bits (199), Expect = 2e-20
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 5   FKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRR 62
           F+    ++ HL THG   + C  C         L+ H +VH   K +QC    CGK F  
Sbjct: 17  FRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSL 76

Query: 63  SKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 99
             +L+ H  +HTG RPY CP+  C++ FA  +N +SH  
Sbjct: 77  DFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 65.2 bits (160), Expect = 1e-14
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 20 ETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
               CPH  C         +R HL  H   + + C  CGK+F  S  LK H  +HTG++
Sbjct: 3  PRTIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 78 PYTCPW--CSRTFANGSNCRSHKR 99
          P+ C +  C + F+   N R+H R
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVR 85

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKS 59
           F    +LK H   H GE P+ C    C  + +    LR H+ +H   + Y C    C K 
Sbjct: 44  FVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK 103

Query: 60  FRRSKDLKNHHNLHTGKRPY 79
           F +S +LK+H   H   +  
Sbjct: 104 FAQSTNLKSHILTHAKAKNN 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.2 bits (199), Expect = 2e-20
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMH---LVVHRDTKAYQCVTCGKSF 60
           F +KY LK+H   H GE P+ CP C      +  L  H     ++R  + + C  C ++F
Sbjct: 17  FLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF 76

Query: 61  RRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 102
           RR  +L+ H   HTG+ PY C  CS+ F    + +SH  ++H
Sbjct: 77  RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 67.1 bits (165), Expect = 2e-15
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHH---NLHTG 75
          G +   CP C  K  ++  L++H   H   K ++C  CGK + R ++L  H     ++  
Sbjct: 4  GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63

Query: 76 KRPYTCPWCSRTFANGSNCRSHKR 99
          ++ +TC  C  TF      R H  
Sbjct: 64 EQVFTCSVCQETFRRRMELRLHMV 87

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 49  KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 100
              +C TC K F     LK H+  HTG++P+ CP C + +    N   H+ R
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEAR 57

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.9 bits (188), Expect = 4e-18
 Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 1/96 (1%)

Query: 5  FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
                         GE PY CP C    +    L  H   H   K Y+C  CGKSF   
Sbjct: 3  EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 64 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          KDL  H   HTG++PY CP C ++F+  +N R+H+R
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR 98

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.6 bits (187), Expect = 6e-18
 Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F     L  H  TH GE PY CP C    + ++ L  H   H   K Y+C  CGKSF + 
Sbjct: 31  FSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQR 90

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 110
            +L+ H   HTG++PY CP C ++F+  ++ R+H+ R H  E K Y+
Sbjct: 91  ANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHTGE-KPYK 135

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.2 bits (186), Expect = 7e-18
 Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F  K  L  H  TH GE PY CP C    + R  LR H   H   K Y C  CGKSF + 
Sbjct: 59  FSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQL 118

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
             L+ H   HTG++PY CP C ++F+   N  +H+R
Sbjct: 119 AHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR 154

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 72.9 bits (180), Expect = 5e-17
 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F  +  L+ H  TH GE PY CP C    +    LR H   H   K Y+C  CGKSF R 
Sbjct: 87  FSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRE 146

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +L  H   HTG++PY CP C ++F+       H+R
Sbjct: 147 DNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 54.8 bits (133), Expect = 3e-10
 Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F     L+ H  TH GE PY CP C    +    L  H   H   K Y+C  CGKSF R 
Sbjct: 115 FSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174

Query: 64  KDLKNHHNLHTGKRP 78
             L  H   HTGK+ 
Sbjct: 175 DALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 59 SFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          S   S        L  G++PY CP C ++F+   +   H+R
Sbjct: 2  SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR 42

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.6 bits (184), Expect = 7e-18
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 13/111 (11%)

Query: 5   FKTKYRLKLHLDTH----GETPYGCPHCPMKLNTRR-----TLRMHLVVHRDTKAYQCVT 55
           F ++ +L  H+++         + C         R       L +H+  H   K ++C  
Sbjct: 13  FDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF 72

Query: 56  --CGKSFRRSKDLKNHHNLHTGKRPYTC--PWCSRTFANGSNCRSHKRRMH 102
             C KS+ R ++LK H   HTG++PY C    CS+ F+N S+   H+ R H
Sbjct: 73  EGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 68.0 bits (167), Expect = 2e-15
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQC--VTCGKS 59
           FK +Y L +H+  H GE P+ C    C    +    L+ HL  H   K Y C    C K+
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA 108

Query: 60  FRRSKDLKNHHN-LHTGKRPYTC--PWCSRTFANGSNCRSHKR 99
           F  + D   H N  H+ ++PY C  P C++ + + S+ R H +
Sbjct: 109 FSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 53.0 bits (128), Expect = 1e-09
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 8/60 (13%)

Query: 49  KAYQCVTCGKSFRRSKDLKNH---HNLHTGKRPYTCPWC-----SRTFANGSNCRSHKRR 100
              +   C + F   + L +H    ++H  ++ + C W       R F        H RR
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 45.3 bits (108), Expect = 7e-07
 Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 6/77 (7%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPH--CPMKLNTRRTLRMHLV-VHRDTKAYQCVT--CGK 58
           +     LK HL +H GE PY C H  C    +       H    H + K Y C    C K
Sbjct: 79  YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTK 138

Query: 59  SFRRSKDLKNHHNLHTG 75
            +     L+ H     G
Sbjct: 139 RYTDPSSLRKHVKTVHG 155

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 72.5 bits (179), Expect = 1e-17
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)

Query: 11  LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNH 69
                     +  + C  C         L +H   H D + Y C  C K+FRR   L++H
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 70  HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 110
             +H+ ++P+ C  C + F        HK  +H +      
Sbjct: 65  RYIHSKEKPFKCQECGKGFCQSRTLAVHK-TLHMQT-SSPT 103

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 60.5 bits (148), Expect = 5e-13
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F   Y L +H  TH  E PY C  C      +  LR H  +H   K ++C  CGK F +S
Sbjct: 27  FTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS 86

Query: 64  KDLKNHHNLHTGKRPYTC 81
           + L  H  LH      T 
Sbjct: 87  RTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 60.5 bits (148), Expect = 5e-13
 Identities = 19/63 (30%), Positives = 29/63 (46%)

Query: 37 TLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS 96
                +  +  K + C  CG+ F +S +L  H   HT +RPYTC  C + F    + R 
Sbjct: 4  GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 97 HKR 99
          H+ 
Sbjct: 64 HRY 66

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 9/37 (24%), Positives = 13/37 (35%)

Query: 63 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          S            K+ + C +C R F    N   H+R
Sbjct: 2  SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER 38

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 72.6 bits (179), Expect = 2e-17
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 4   RFKTKYRLKLHLDTH-GETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSF 60
           R+     L++H   H GE PY C    C  + +    L+ H   H   K +QC TC + F
Sbjct: 17  RYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF 76

Query: 61  RRSKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 99
            RS  LK H   HTG++P++C W  C + FA       H  
Sbjct: 77  SRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 63.3 bits (155), Expect = 7e-14
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 19 GETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRRSKDLKNHHNLHT 74
           + P+ C  P C  +      L+MH   H   K YQC    C + F RS  LK H   HT
Sbjct: 3  EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT 62

Query: 75 GKRPYTCPWCSRTFANGSNCRSHKR 99
          G +P+ C  C R F+   + ++H R
Sbjct: 63 GVKPFQCKTCQRKFSRSDHLKTHTR 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 71.7 bits (177), Expect = 2e-17
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 17 TH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG 75
          +     P+ C  C    + +  L+ H+  H   K Y+C TC  +   S  L  H  +H+ 
Sbjct: 2  SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 76 KRPYTCPWCSRTFANGSNCRSHKR 99
          +RP+ C  C     N S    H R
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLR 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 62.8 bits (154), Expect = 6e-14
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 5  FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
          F  K +LK H+  H G  PY C  C        +L  HL +H D + ++C  C  + R S
Sbjct: 18 FSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS 77

Query: 64 KDLKNHHNLHTGKRPYTC 81
            L  H   HTG    + 
Sbjct: 78 SQLTVHLRSHTGDSGPSS 95

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.8 bits (172), Expect = 1e-16
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 19  GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG--K 76
           G +   C  C         L  H + H   K Y C  CG  F+R   +  H   H G   
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 63

Query: 77  RPYTCPWCSRTFANGSNCRSHKRRMH 102
           +PY C  C + F+   +   H +++H
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 49  KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHP-EELK 107
               C  CGK FR    L  H   H+G++PY+CP C   F        H  R H     K
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGK 64

Query: 108 LYE 110
            Y 
Sbjct: 65  PYI 67

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 70.4 bits (173), Expect = 3e-16
 Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 14/109 (12%)

Query: 5   FKTKYRLKLHLDTH-GETPY---------GCPHCPMKLNTRRTLRMHLVVHRDTKAYQC- 53
           F T + L  H+       P           CP        +  L  H+ VH   K + C 
Sbjct: 35  FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP 94

Query: 54  -VTCGKSFRRSKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 99
              CGK F RS++LK H   HTG++P+ C +  C R FAN S+ + H  
Sbjct: 95  FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 64.2 bits (157), Expect = 6e-14
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 5   FKTKYRLKLHLDTH----GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQ-------- 52
             +   +K  L        +       C    +T   L  H+ +       Q        
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE 63

Query: 53  -CVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 99
            C   GKSF+    L NH  +HTG++P+ CP+  C + FA   N + HKR
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR 113

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.8 bits (143), Expect = 6e-12
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKS 59
           FK KY+L  H+  H GE P+ CP   C         L++H   H   K ++C    C + 
Sbjct: 72  FKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRR 131

Query: 60  FRRSKDLKNHHNLHTGKRPYTC 81
           F  S D K H ++HT  +    
Sbjct: 132 FANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 53.1 bits (128), Expect = 9e-10
 Identities = 10/82 (12%), Positives = 21/82 (25%), Gaps = 9/82 (10%)

Query: 28  CPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYT------- 80
                   +       +     +    +C ++F    +L  H  +     P         
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 81  --CPWCSRTFANGSNCRSHKRR 100
             CP   ++F       +H R 
Sbjct: 63  EECPREGKSFKAKYKLVNHIRV 84

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 9/49 (18%), Positives = 15/49 (30%)

Query: 56  CGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 104
            G S +  K   +   +   +       C RTF+      +H    H  
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG 51

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 67.9 bits (167), Expect = 5e-16
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          E PY CP   C  + +   +L  H+ +H   K +QC  C ++F RS  L  H   HTG++
Sbjct: 2  ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 78 PYTCPWCSRTFANGSNCRSHKR 99
          P+ C  C R FA     + H +
Sbjct: 62 PFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.0 bits (131), Expect = 1e-10
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 4  RFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRR 62
          RF     L  H+  H G+ P+ C  C    +    L  H+  H   K + C  CG+ F R
Sbjct: 15 RFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR 74

Query: 63 SKDLKNHHNLHTG 75
          S + K H  +H  
Sbjct: 75 SDERKRHTKIHLR 87

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 66.8 bits (164), Expect = 1e-15
 Identities = 21/83 (25%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 11 LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVH----RDTKAYQCVTCGKSFRRSKD 65
                TH GE PY C HC      ++ L MH   +        A+ C  CGK+F R   
Sbjct: 3  SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 66 LKNHHNLHTGKRPYTCPWCSRTF 88
          +  H +   G           + 
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 55.2 bits (134), Expect = 4e-11
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 4/67 (5%)

Query: 37 TLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG----KRPYTCPWCSRTFANGS 92
          +       H   K Y C  C K+FR+ + L  H   +         + C  C +TF   +
Sbjct: 2  SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 93 NCRSHKR 99
              H  
Sbjct: 62 TMARHAD 68

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 65.9 bits (162), Expect = 2e-15
 Identities = 29/77 (37%), Positives = 42/77 (54%)

Query: 23 YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP 82
          + C  C        TL  HL++H DT+ Y C  CGK F +  D+K H  +HTG++P+ C 
Sbjct: 2  FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 83 WCSRTFANGSNCRSHKR 99
           C + F+  SN  +H R
Sbjct: 62 VCGKAFSQSSNLITHSR 78

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.0 bits (139), Expect = 5e-12
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 50 AYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          ++ C  CGKSF+RS  L  H  +H+  RPY C +C + F   S+ + H  
Sbjct: 1  SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF 50

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 50.1 bits (121), Expect = 3e-09
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 5  FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
          FK    L  HL  H    PY C +C  + + +  ++ H  +H   K ++C  CGK+F +S
Sbjct: 11 FKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS 70

Query: 64 KDLKNHHNLHTG 75
           +L  H   HTG
Sbjct: 71 SNLITHSRKHTG 82

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 64.5 bits (158), Expect = 9e-15
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 11 LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVH--RDTKAYQCVTCGKSFRRSKDLK 67
                TH GE PY C  C  +     T++MH++     +   + C  C     R  DL 
Sbjct: 3  SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 68 NHH-NLHTGKRPYT 80
           H    H+   P +
Sbjct: 63 VHLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 63.3 bits (155), Expect = 2e-14
 Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 37  TLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG--KRPYTCPWCSRTFANGSNC 94
           +       H   K Y+C  C   F +S  +K H           + CP C    A  S+ 
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 95  RSHKRRMH 102
             H R+ H
Sbjct: 62  GVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 66  LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 110
             +    H+G++PY C  C   F      + H  + H E +  + 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH 47

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 64.8 bits (159), Expect = 1e-14
 Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 3/93 (3%)

Query: 5   FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRS 63
           F  K +   H+  H G  PYGC  C  K   +  L  H+ +H   K Y+C  C K F   
Sbjct: 19  FTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR 78

Query: 64  KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS 96
                H ++ +  + Y      +     S   S
Sbjct: 79  DSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 61.7 bits (151), Expect = 2e-13
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 17 TH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG 75
             G+  Y C  C      +     H+ +H   + Y C  CGK F+    L  H  +HTG
Sbjct: 4  GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

Query: 76 KRPYTCPWCSRTFANGSN 93
           +PY C  C++ F    +
Sbjct: 63 IKPYECNICAKRFMWRDS 80

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 62.9 bits (154), Expect = 2e-14
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 49  KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 102
           +++ C  C ++F R + LK H+  HT ++PY C  C+R F        H +++H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.1 bits (162), Expect = 3e-14
 Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 14  HLDTH-GETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQC--VTCGKSFRRSKDLKN 68
                     Y C    C    N    L+ HL  H   K + C    C K F     L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 69  HHNLHTGKRPYTC--PWCSRTFANGSNCRSHKRRMHPEELKLYE 110
           H   HTG++ +TC    C   F   +N + H  R H  ++ +Y 
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYV 106

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 58.8 bits (143), Expect = 1e-11
 Identities = 25/107 (23%), Positives = 34/107 (31%), Gaps = 7/107 (6%)

Query: 5   FKTKYRLKLHLDTH-GE--TPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQC--VTCG 57
           F TK  +K H +         Y C   +C         L++H   H     Y+C    C 
Sbjct: 84  FTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCD 143

Query: 58  KSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 104
           K F     LK H  +H G        CS      +    H    H +
Sbjct: 144 KRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 62.9 bits (154), Expect = 4e-14
 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 19  GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC--VTCGKSFRRSKDLKNHHNLHTGK 76
                    C         L+ HL  H   K Y C    CG  F RS +L  H+  HTG 
Sbjct: 4   ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH 63

Query: 77  RPYTCPWCSRTFANGSNCRSHKRR 100
           RP+ C  C R F+   +   H +R
Sbjct: 64  RPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 53.7 bits (130), Expect = 1e-10
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 99
             T       CGK++ +S  LK H   HTG++PY C W  C   FA       H R
Sbjct: 2  RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR 58

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 11 LKLHLDTH-GETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLK 67
          LK HL TH GE PY C    C  K      L  H   H   + +QC  C ++F RS  L 
Sbjct: 23 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA 82

Query: 68 NHHNLH 73
           H   H
Sbjct: 83 LHMKRH 88

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.7 bits (150), Expect = 1e-13
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 49  KAYQCVTCGKSFRRSKDLKNHHNLHT---GKRPYTCPWCSRTFANGSNCRSHKRRMHPEE 105
              QC  CG + R+   L  H   H        + C +C + F    +  +H+ + HP  
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 106 LKLYESSLG 114
           L   + S G
Sbjct: 66  LLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 10/62 (16%), Positives = 16/62 (25%), Gaps = 5/62 (8%)

Query: 4  RFKTKYRLKLHLDTH----GETPYGCPHCPMKLNTRRTLRMHL-VVHRDTKAYQCVTCGK 58
            + K  L  H   H        + C  C  +     ++  H    H         + G 
Sbjct: 16 TCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGP 75

Query: 59 SF 60
          S 
Sbjct: 76 SS 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 22  PYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
           P+ C  C    +    L  H+  H   K + C  CG+ F RS + K H ++     P   
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL-PILE 61

Query: 82  PWCSRTFANGSNCRSHKRRM 101
                  +   +  +   R+
Sbjct: 62  DKVEELLSKNYHLENEVARL 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 60.2 bits (147), Expect = 5e-13
 Identities = 19/51 (37%), Positives = 27/51 (52%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          K +QC  C ++F RS  L  H   HTG++P+ C  C R FA     + H+ 
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.5 bits (148), Expect = 2e-13
 Identities = 23/63 (36%), Positives = 31/63 (49%)

Query: 37 TLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS 96
          +        R+ + Y+C  CGKSF  S DL  H   HTG++PY C  C + F   S+   
Sbjct: 5  SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 97 HKR 99
          H R
Sbjct: 65 HHR 67

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.6 bits (130), Expect = 1e-10
 Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 11 LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNH 69
                       Y C  C    +    L  H   H   K Y+C  CGK+F +   L  H
Sbjct: 6  SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 70 HNLHTGKRPY 79
          H +HTG  P 
Sbjct: 66 HRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.3 bits (93), Expect = 3e-05
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 63 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          S            +R Y C  C ++F++ S+   H+R
Sbjct: 3  SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR 39

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 60.5 bits (148), Expect = 3e-13
 Identities = 21/62 (33%), Positives = 31/62 (50%)

Query: 38 LRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 97
             H  +    K Y+C  C  SFR   +L +H  +HTG++PY C  C   F   +N ++H
Sbjct: 5  HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 98 KR 99
           R
Sbjct: 65 TR 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 56.7 bits (138), Expect = 7e-12
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 14 HLDTH-----GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKN 68
          H   H      + PY C  C      +  L  H  VH   K Y+C  CG  F R  +LK 
Sbjct: 4  HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 69 HHNLHTGKRPY 79
          H  +H+G++PY
Sbjct: 64 HTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 63 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
               +H ++    +PY C  C  +F    N  SHK 
Sbjct: 2  GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT 38

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 59.9 bits (146), Expect = 4e-13
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 19 GETPYGCPH--CPMKLNTRRTLRMHL-VVHRDTKAYQC--VTCGKSFRRSKDLKNHHNLH 73
          G +   C    C    + R+ L  H    H   K++ C    CGKSF   K LK H  LH
Sbjct: 4  GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63

Query: 74 TGKRPYTCPWCSRTF 88
          +  R Y C +   + 
Sbjct: 64 SDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 52.6 bits (127), Expect = 4e-10
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 49 KAYQCVT--CGKSFRRSKDLKNHH-NLHTGKRPYTCP--WCSRTFANGSNCRSHKR 99
              C    CG+ F   + L +H    H  ++ ++CP   C ++F    + + H +
Sbjct: 6  SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 2/32 (6%)

Query: 73  HTGKRPYTCPW--CSRTFANGSNCRSHKRRMH 102
            +G     C +  C R F+N      HK+  H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.8 bits (146), Expect = 5e-13
 Identities = 24/62 (38%), Positives = 33/62 (53%)

Query: 38 LRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 97
                +H   K Y CV CGK+F RS  L  H  +HTG++PY C  C + F+  S   +H
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 98 KR 99
          +R
Sbjct: 62 QR 63

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 55.9 bits (136), Expect = 1e-11
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 11 LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNH 69
                 H GE PYGC  C    +    L  H  VH   K Y+C+ CGK+F ++  L NH
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 70 HNLHTGKRPY 79
            +HT     
Sbjct: 62 QRIHTSGPSS 71

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 59.1 bits (144), Expect = 8e-13
 Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 45  HRDTKAYQCVTCGKSFRRSKDLKNHH--NLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 102
                 Y+C  C + +    +   H+  +     + Y CP+C + F    N  +H + +H
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Query: 103 P 103
            
Sbjct: 65  K 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 16/62 (25%), Positives = 20/62 (32%), Gaps = 3/62 (4%)

Query: 17 TH-GETPYGCPHCPMKLNTRRTLRMHL--VVHRDTKAYQCVTCGKSFRRSKDLKNHHNLH 73
          T  GE  Y C  C            H      R+ K Y C  C K F R  ++  H  + 
Sbjct: 4  TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 74 TG 75
            
Sbjct: 64 HK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 73  HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 110
             G+  Y C  CSR + + SN   H    H   +K+Y 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYP 42

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 59.2 bits (144), Expect = 1e-12
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 16  DTHGETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHN 71
           D      + C  P C         L+ HL  H   K Y+C    C   F RS +L  H+ 
Sbjct: 9   DLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR 68

Query: 72  LHTGKRPYTCPWCSRTFANGSNCRSHKRR 100
            HTG +P+ C  C+R+F+   +   H +R
Sbjct: 69  KHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.4 bits (103), Expect = 1e-06
 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 11 LKLHLDTH-GETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLK 67
          LK HL TH GE PY C    C  +      L  H   H   K +QC  C +SF RS  L 
Sbjct: 33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92

Query: 68 NHHNLHT 74
           H   H 
Sbjct: 93 LHMKRHQ 99

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.4 bits (137), Expect = 9e-12
 Identities = 14/56 (25%), Positives = 20/56 (35%)

Query: 44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
                  +C  C  S      L+ H  +H   RP+ C +CS      SN   H +
Sbjct: 3  SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 17 TH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG 75
          +     P  C  C    +++  LR+H  +H   + ++C  C    ++  +L  H     G
Sbjct: 3  SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 76 KRPYTCP 82
                 
Sbjct: 63 DMSGPSS 69

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 54.9 bits (133), Expect = 3e-11
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 44 VHRDTKAYQCVTCGKSFRRSKDLKNH-HNLHTGKRPYTCPWCSRTFANG 91
               K Y C +CGK F R   L  H   +HT +RP+ C       ++G
Sbjct: 6  SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 7/35 (20%), Positives = 17/35 (48%)

Query: 68  NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 102
           +  +  +  +PY C  C + F+   +   H +++H
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 52.7 bits (127), Expect = 2e-10
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 41  HLVVHRDT--KAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS 96
           +L+ +     + Y C   +C + F RS +L  H  +HTG++P+ C  C R F+   +  +
Sbjct: 8   NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 97  HKRR 100
           H R 
Sbjct: 68  HIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 11 LKLHLDTHGETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKN 68
          L  ++      PY CP   C  + +    L  H+ +H   K +QC  C ++F RS  L  
Sbjct: 9  LLNYVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 69 HHNLHT 74
          H   HT
Sbjct: 68 HIRTHT 73

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 53.4 bits (127), Expect = 4e-10
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 17  THGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGK 76
              +  Y C  C  KL++      H  + R+  A  C  C   F  S +LK  H      
Sbjct: 11  VENKEVYQCRLCNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFF-SPELKQEHESKCEY 67

Query: 77  RPYTCPWCSRTFANGSNCRSHKRRMHPEE 105
           +  TC  C RTF +  +   H+  +H + 
Sbjct: 68  KKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 52.5 bits (125), Expect = 8e-10
 Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 6/108 (5%)

Query: 11  LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHL-----VVHRDTKAYQCVTCGKSFRRSK 64
            KL+     G + + C  C    +T   L +H+         + +         S  R +
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 65  DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS 112
            L         ++   C +C  +F +  +   H  +    +     SS
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.9 bits (125), Expect = 8e-10
 Identities = 18/80 (22%), Positives = 24/80 (30%), Gaps = 2/80 (2%)

Query: 25  CPHCPMKLNTRRTLRMHLVVHRDTKAYQC--VTCGKSFRRSKDLKNHHNLHTGKRPYTCP 82
             +C         L++H   H     Y+C    C K F     LK H  +H G       
Sbjct: 6   FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65

Query: 83  WCSRTFANGSNCRSHKRRMH 102
            CS      +    H    H
Sbjct: 66  SCSFVGKTWTLYLKHVAECH 85

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 50.1 bits (120), Expect = 3e-09
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 35  RRTLRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPW--CSRTFAN 90
                   +     +++ C    CGK++ +S  LK H   HTG++P++C W  C R FA 
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 91  GSNCRSHKRR 100
                 H+R 
Sbjct: 62  SDELSRHRRT 71

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.6 bits (115), Expect = 8e-09
 Identities = 17/54 (31%), Positives = 23/54 (42%)

Query: 51  YQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 104
           Y C  CG   ++   LK H   HT  RPY C +C+ +F    N   H +     
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 6e-05
 Identities = 14/53 (26%), Positives = 21/53 (39%)

Query: 23 YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG 75
          Y C  C ++      L+ H+  H D + Y C  C  SF+   +L  H      
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-09
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K YQC  CGKSF  S  L  H   HT ++P   
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 9e-09
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+FR S  L  HH++H+G+RP   
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+CV CGK ++R  DL  H  +HTG++    
Sbjct: 3  SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGKSFR +  L  H  +H+G++P   
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  TG++PY C  C ++F   S    H+R
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F   +DL  HH +HTG++P   
Sbjct: 3  SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  TG++PY C  C + F    +  +H  
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTHHM 33

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGKSF R+  L  H  LH+G++P   
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  TG++ Y C  C ++F+       H+R
Sbjct: 2  SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER 33

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++CV CGK F R   L  HH LHTG++P   
Sbjct: 3  SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K +QC  CGK F ++  L +H  +HTG++P   
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F +S  L+ H  +HTG++P   
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGK F ++  L +H  +HTG++P   
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  +G++P+ C  C + F   S   SH+R
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.3 bits (111), Expect = 3e-08
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYT 80
          K Y C  CG  FR  + LK+H  +HTG  P +
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
                G++PY C  C   F +    +SH R
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR 32

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 3e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F R   L  H  +HTG RP   
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGK+F  S +L  H  +HTG++P   
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  + Y C  CGK+F R   L  H   H  ++    
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  +G+RPY C  C + F   S+   H +
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLK 33

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 4e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  + ++C  CGKSF +S  L  H  +HTG++P   
Sbjct: 3  SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F R+  L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  TG++ Y C  C + F+  S    H++
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F ++  L NH  +HTG +P   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C+ CGK+F  +     H  LHTG+RP   
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  TG++PY C  C + F + S+C  H+R
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  + ++C  CGK F R   L  H  LH+ ++    
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGKSF     L+ H   HTG+R    
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  TG++PY C  C ++F   S  R H++
Sbjct: 2  SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+FR   +L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  TG++PY C  C + F   SN  +H+ 
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK FR +  L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  C KSFR    L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  TG++PY C  C ++F  GS+   H+R
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 5e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F ++  L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGK+F     L+ H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  TG++PY C  C + F + S  + H+R
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQR 33

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 5e-08
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK + R  +L  H  +H G++    
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  + ++PY C  C + +    N   H+R
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR 33

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 46.1 bits (109), Expect = 5e-08
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCS 85
           R  K   C  CGK FR    L  H   H+G++PY+    S
Sbjct: 7  GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F ++  L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGK+FR++  L +H  +HTG++P   
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F +  +L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  TG++PY C  C + FA  +N   H+R
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGKSF  S  L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGK+F    +L  H  +HT ++P   
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 12/41 (29%), Positives = 15/41 (36%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGK+F  S  L  H  +HT +     
Sbjct: 3  SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYT 80
                  K Y+C TCG  F +   L+ H  +HTG  P +
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
                G++PY C  C   F   ++ R+H  
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVL 32

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK +    +L  H  +HTG+RP   
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  TG++PY C  C + + +  N   H++
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK 33

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F ++  L  H  +HTG++P   
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGKSF     L  H  +HT ++P   
Sbjct: 3  SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F ++  L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGKSF +   L  H  +HTG+ P   
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K + C+ CGK+F     L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  TG++P+ C  C + F++      H+R
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR 33

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F    +L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 8e-08
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  C   F ++  L+ H N+H G++P   
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-08
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK FRR+  L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F ++  L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-08
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F ++  L NH  +HTG++P   
Sbjct: 3  SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 45.2 bits (108), Expect = 9e-08
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGKSFR   +L  H  +HTG++    
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 9e-08
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F R   L  H   HTG+R    
Sbjct: 3  SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 9e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK F ++  L  H  +HTG +P   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  + Y C  CGK+F    +L  H  +HTG++P   
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 9e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
            +  TG+RPY C  C + F + SN   H++
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGKSF  +  L  H  +HTG+ P   
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  + Y+C+ CGK+F+    L  H   HTG++P   
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGKS+ +   L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  C K+F     L  H  +H+G++P   
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K YQC  CGK+F ++  L  H  +HTG++P   
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
            Y+C  CGK+F R   L +H   H G+   + 
Sbjct: 9  NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGK+F     L  H  +HTG++P   
Sbjct: 3  SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  TG +PY C  C + F+  S+  +H+ 
Sbjct: 2  SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  C K+F +S  L  H  +HTG++P   
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                    + C  CGK F    +L  H  +HTG+RP   
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  TG+ P+ C  C + F + +N   H++
Sbjct: 2  SSGSSGTGENPFICSECGKVFTHKTNLIIHQK 33

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGK F  +    +H   H+G++P   
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +  +G++P+ C  C + F   S C SH+R
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR 33

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  + Y+C  CGK+F R   L  H  +HTG++P   
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  C K+F +   L  H  +HTG+R    
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGKSF +   L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGKSF +   L  H  +HTG++P   
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  CGK+F R   L  H  +HTG++P   
Sbjct: 3  SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  + Y+C  CGK+F +   L  H  +H G++P   
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  + ++C  CGK F ++ +   H  +HTG++P   
Sbjct: 3  SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 68 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          +  +   G+R + C  C + F   SN   H+R
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGK+FR    L  H   HTG+   + 
Sbjct: 3  SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYT 80
          + Y+C  CGKSFR+   L  H  +HTG  P +
Sbjct: 9  RVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGK+F     L  H   H+G++P   
Sbjct: 3  SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+FR    L  H   H+G++P   
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F     L  H  +HTGK+P   
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  C K+F +   L  H   HTG++P   
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                    Y+C  CGK+F R   L +H   H G++P   
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
          K +QC  CG +F  S  L  H   H    P   
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 69  HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 114
             +  TG++P+ C  C   F+   +   H  R H         S G
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHERT-DPSGPSSG 46

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F   + L  H  +H+GK+P   
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
          K + C  C K+F     L  H   H  ++P   
Sbjct: 9  KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 14/41 (34%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  C K+F     L  H   HTG +P   
Sbjct: 3  SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.7 bits (107), Expect = 4e-07
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 41  HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 100
            L+  +    + C  C   F  S  LK H  +   +    CP C + F +  +   H  +
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQH--IRYTEHTKVCPVCKKEFTSTDSALDHVCK 122

Query: 101 MH 102
            H
Sbjct: 123 KH 124

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.8 bits (102), Expect = 2e-06
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 10  RLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNH 69
            L   L +   + + CP C M  ++  +L+ H+          C  C K F  +    +H
Sbjct: 62  YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDH 119

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
          K  +C  CGK+F     L  H   H   +    
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.2 bits (103), Expect = 4e-07
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  C K+F    +L  H   HTG+   + 
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                 TK++QC  CG+ F     L  H  +HTG++P   
Sbjct: 3  SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y C  CGK+F +   L  H   HTG++P   
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHH-NLHTGKRPYTCP 82
                  K Y+C+ CGK+F ++  L  H    HTG++P    
Sbjct: 3  SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 68  NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 114
           +  +  TGK+PY C  C + F   ++   H R  H  E K    S G
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYT 80
                  K Y+C  CGK+F +   L  H  +HTG  P +
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 34.5 bits (80), Expect = 8e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
                G++PY C  C + F+   +   H R
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                    Y+C  CGK F R   L +H   H+G+   + 
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K ++C  C K+F    +L  H   HTG++P   
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                    Y+C  C KSF     L  H  +HT ++P   
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 14/41 (34%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K Y+C  CGK+F     L  H   H G    + 
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K++ C  CGK+F     L+ H  +H G++    
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 69  HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 114
             +  +G++ +TC  C + F   S  R H+ R+H  E K    S G
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGE-KCSGPSSG 46

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.0 bits (97), Expect = 3e-06
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                D+K+Y C  CGK+F R   L  H  +HT K   + 
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 41.1 bits (97), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 41 HLVVHRDTKAYQC--VTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
                  K + C    CG  F RS +L  H   H+G +P   
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYT 80
            Y C  CGKSF +   L  H    +   P +
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.0 bits (93), Expect = 2e-05
 Identities = 8/69 (11%), Positives = 20/69 (28%), Gaps = 8/69 (11%)

Query: 37  TLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS 96
           +      +H   ++ +C  CG  F R           + ++   C  C +     +    
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57

Query: 97  HKRRMHPEE 105
            +      +
Sbjct: 58  DE-GNESGK 65

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 14/70 (20%), Positives = 19/70 (27%), Gaps = 8/70 (11%)

Query: 11 LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNH 69
                 H G+    C  C +    R TL          K   C  C K   +   L   
Sbjct: 6  SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKD 58

Query: 70 HNLHTGKRPY 79
              +GK+  
Sbjct: 59 EGNESGKKTS 68

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC 81
          K Y C  C ++F  +  L  H  +HT K   + 
Sbjct: 9  KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 9/73 (12%)

Query: 18 HGETPYGCPHCPMKLNTRRTLRMHL----VVHRDTKAYQC-----VTCGKSFRRSKDLKN 68
            +       C    +T   L  H+    V   +   + C        GKSF+    L N
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 69 HHNLHTGKRPYTC 81
          H  +HTG++    
Sbjct: 81 HIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 37.6 bits (87), Expect = 2e-04
 Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 9/65 (13%)

Query: 44 VHRDTKAYQCVTCGKSFRRSKDLKNH-HNLHTG---KRPYTCPW--CSR---TFANGSNC 94
          +     +    +C ++F    +L  H    H G   +  + C W  C R   +F      
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 95 RSHKR 99
           +H R
Sbjct: 79 VNHIR 83

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.9
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.88
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.87
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.87
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.87
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.87
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.87
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.86
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.86
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.86
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.82
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.82
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.81
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.81
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.81
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.79
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.78
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.75
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.73
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.71
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.71
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.69
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.68
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.67
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.65
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.65
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.64
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.64
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.64
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.64
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.63
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.63
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.61
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.61
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.61
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.6
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.6
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.6
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.6
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.59
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.58
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.58
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.58
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.57
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.55
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.55
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.55
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.55
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.54
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.54
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.54
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.51
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.5
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.45
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.44
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.44
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.4
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.37
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.36
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.36
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.36
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.35
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.35
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.35
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.34
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.34
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.32
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.31
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.3
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.3
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.28
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.26
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.26
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.26
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.26
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.24
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.23
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.23
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.22
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.22
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.22
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.22
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.2
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.19
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.18
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.18
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.18
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.14
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.14
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.14
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.14
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.09
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.07
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.02
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.01
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.95
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.92
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.87
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.87
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.86
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.86
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.82
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.76
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.71
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.68
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.65
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.61
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.59
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.57
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.57
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.56
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.56
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.52
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.52
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.51
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.49
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.49
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.48
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.48
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.48
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.46
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.45
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.44
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.44
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.44
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.43
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.42
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.79
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.78
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.39
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.38
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.35
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.35
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.34
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.33
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.66
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.3
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.29
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.26
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.25
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.24
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.23
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.22
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.21
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.18
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.45
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.45
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.14
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.41
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.08
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.05
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.04
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.9
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.31
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.97
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.75
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.64
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.28
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.48
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.31
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.09
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	93.81
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.33
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	92.52
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	89.86
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	88.9
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	88.11
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	87.92
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	87.81
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	87.25
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	86.74
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	86.53
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.03
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	84.82
2ct5_A	73	Zinc finger BED domain containing protein 1; DREF	84.63
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	82.72
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	81.77
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	81.27
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	80.95

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=7.5e-25  Score=138.25  Aligned_cols=103  Identities=34%  Similarity=0.714  Sum_probs=97.1

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHh---cCCCCceeccccccccCCHHhHHhHHhhcCCCCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVV---HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRP   78 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   78 (159)
                      +.|.+...|..|++.| ++++|.|+.|++.|.+...|..|++.   +.+.++|.|..|++.|.+...|..|++.|+++++
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   94 (124)
T 2dlq_A           15 KKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMP   94 (124)
T ss_dssp             CCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCS
T ss_pred             CcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            5789999999999999 79999999999999999999999986   5678999999999999999999999999999999


Q ss_pred             cccccCcccccCchhHHHhHHhhCCch
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      |.|.+|++.|.+...|..|++.+|.++
T Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           95 YKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             ccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            999999999999999999999888654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=4.2e-26  Score=145.99  Aligned_cols=92  Identities=29%  Similarity=0.479  Sum_probs=87.3

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCch
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGS   92 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   92 (159)
                      |.++| |+++|.|++|++.|.+...|..|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|++.|.+..
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            44556 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHhHHhhCCch
Q psy16923         93 NCRSHKRRMHPEE  105 (159)
Q Consensus        93 ~l~~H~~~~h~~~  105 (159)
                      .|..|++.+|++.
T Consensus        93 ~L~~H~~~hh~~~  105 (133)
T 2lt7_A           93 FMSSHIKSVHSQD  105 (133)
T ss_dssp             HHHHHHHHHTCCC
T ss_pred             HHHHHhHHhcCCC
Confidence            9999999999764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=9.3e-25  Score=136.96  Aligned_cols=99  Identities=34%  Similarity=0.747  Sum_probs=94.7

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCC--CCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCc
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      +.|.+...|..|++.| ++++|.|+  .|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+++++|
T Consensus        16 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (119)
T 2jp9_A           16 KRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPF   95 (119)
T ss_dssp             CCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCE
T ss_pred             chhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCe
Confidence            5789999999999999 89999999  79999999999999999999999999999999999999999999999999999


Q ss_pred             cc--ccCcccccCchhHHHhHHhh
Q psy16923         80 TC--PWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        80 ~C--~~C~~~f~~~~~l~~H~~~~  101 (159)
                      .|  +.|++.|.+...|..|+++|
T Consensus        96 ~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           96 SCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             eCCCCCCccccCCHHHHHHHHhcC
Confidence            99  88999999999999999864

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.91  E-value=9e-25  Score=147.66  Aligned_cols=121  Identities=35%  Similarity=0.700  Sum_probs=92.8

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      +.|.+...|..|++.| ++++|.|+.|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus        57 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  136 (190)
T 2i13_A           57 KSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKC  136 (190)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             chhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeEC
Confidence            4577788888888887 778888888888888888888888888888888888888888888888888888888888888


Q ss_pred             ccCcccccCchhHHHhHHhhCCchhhhhhhccccccccccccc
Q psy16923         82 PWCSRTFANGSNCRSHKRRMHPEELKLYESSLGIVHKEKKKFD  124 (159)
Q Consensus        82 ~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~  124 (159)
                      +.|++.|.+...|..|++.|+++ ....+..++........+.
T Consensus       137 ~~C~~~f~~~~~L~~H~~~H~~~-~~~~C~~C~~~f~~~~~L~  178 (190)
T 2i13_A          137 PECGKSFSREDNLHTHQRTHTGE-KPYKCPECGKSFSRRDALN  178 (190)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHCC-CCEECTTTCCEESSHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHhcCCC-CCeECCCCCCccCCHHHHH
Confidence            88888888888888888866543 3455666666655544443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=1.5e-24  Score=137.05  Aligned_cols=103  Identities=34%  Similarity=0.688  Sum_probs=95.6

Q ss_pred             CCCCCHHHHHHHHHhhCCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc--cccccCCHHhHHhHHhhcCCCCCcc
Q psy16923          3 SRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRRSKDLKNHHNLHTGKRPYT   80 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~   80 (159)
                      +.|.+...|..|+++|++++|.|..|++.|.+...|..|++.|.++++|.|..  |++.|.+...|..|++.|+++++|.
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   94 (124)
T 1ubd_C           15 KMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV   94 (124)
T ss_dssp             CEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCC
T ss_pred             CccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceE
Confidence            56889999999999999999999999999999999999999999999999986  9999999999999999999999999


Q ss_pred             cc--cCcccccCchhHHHhHHhhCCch
Q psy16923         81 CP--WCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        81 C~--~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      |+  .|++.|.+...|..|+++|+++.
T Consensus        95 C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           95 CPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             CCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             CCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            96  59999999999999999887653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=1.6e-23  Score=137.02  Aligned_cols=117  Identities=27%  Similarity=0.509  Sum_probs=73.7

Q ss_pred             CCCCCHHHHHHHHH---hh-CCCcccCCC-----CcccCCCHHHHHHHHHhcCCCCceeccc--cccccCCHHhHHhHHh
Q psy16923          3 SRFKTKYRLKLHLD---TH-GETPYGCPH-----CPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRRSKDLKNHHN   71 (159)
Q Consensus         3 ~~f~~~~~l~~H~~---~h-~~~~~~C~~-----C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~   71 (159)
                      +.|.+...|..|++   .| ++++|.|++     |++.|.+...|..|++.|.++++|.|..  |++.|.+...|..|++
T Consensus        11 ~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   90 (155)
T 2gli_A           11 QEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR   90 (155)
T ss_dssp             CBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHH
Confidence            45666677777776   34 456666653     2366777777777777766666677764  7777777777777777


Q ss_pred             hcCCCCCccccc--CcccccCchhHHHhHHhhCCchhhhhhhc--ccccccc
Q psy16923         72 LHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPEELKLYESS--LGIVHKE  119 (159)
Q Consensus        72 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~--~~~~~~~  119 (159)
                      .|+++++|.|+.  |++.|.+...|..|++..|..+....+..  ++.....
T Consensus        91 ~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~  142 (155)
T 2gli_A           91 SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTD  142 (155)
T ss_dssp             HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESS
T ss_pred             HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCC
Confidence            676666777766  77777777777777644454444444444  5444443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.90  E-value=4.8e-24  Score=144.09  Aligned_cols=97  Identities=38%  Similarity=0.843  Sum_probs=46.5

Q ss_pred             CCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923          5 FKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus         5 f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      |.+...|..|++.| ++++|.|+.|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|.++++|.|+.
T Consensus        31 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  110 (190)
T 2i13_A           31 FSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPE  110 (190)
T ss_dssp             CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTT
T ss_pred             cCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCC
Confidence            44444444444444 44444455555555444445555444444444445455544444444444544444444444544


Q ss_pred             CcccccCchhHHHhHHhh
Q psy16923         84 CSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        84 C~~~f~~~~~l~~H~~~~  101 (159)
                      |++.|.+...|..|++.+
T Consensus       111 C~~~f~~~~~l~~H~~~h  128 (190)
T 2i13_A          111 CGKSFSQLAHLRAHQRTH  128 (190)
T ss_dssp             TCCEESSHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHh
Confidence            554444444444444443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=8.1e-23  Score=133.81  Aligned_cols=102  Identities=34%  Similarity=0.668  Sum_probs=94.8

Q ss_pred             CCCCCHHHHHHHHHh-h-CCCc--------ccCCCCcccCCCHHHHHHHHHhcCCCCceeccc--cccccCCHHhHHhHH
Q psy16923          3 SRFKTKYRLKLHLDT-H-GETP--------YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRRSKDLKNHH   70 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~-h-~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~   70 (159)
                      +.|.+...|..|++. | ++.+        |.|..|++.|.+...|..|++.|.++++|.|..  |++.|.+...|..|+
T Consensus        33 ~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  112 (155)
T 2rpc_A           33 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK  112 (155)
T ss_dssp             CCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHH
T ss_pred             cccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHH
Confidence            578999999999998 7 4443        899999999999999999999999999999998  999999999999999


Q ss_pred             hhcCCCCCccccc--CcccccCchhHHHhHHhhCCc
Q psy16923         71 NLHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        71 ~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      +.|+++++|.|.+  |++.|.+...|..|++.|+++
T Consensus       113 ~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A          113 RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             TTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred             HhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            9999999999997  999999999999999987654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=5.1e-23  Score=131.62  Aligned_cols=91  Identities=22%  Similarity=0.370  Sum_probs=84.0

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCC----
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR----   77 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----   77 (159)
                      ++|.....|+.|+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|++.|.+...|..|++.|++++    
T Consensus        30 k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~  109 (133)
T 2lt7_A           30 RSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGD  109 (133)
T ss_dssp             CEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSS
T ss_pred             CCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCC
Confidence            5799999999999999 89999999999999999999999999999999999999999999999999999987654    


Q ss_pred             --CcccccCcccccCchh
Q psy16923         78 --PYTCPWCSRTFANGSN   93 (159)
Q Consensus        78 --~~~C~~C~~~f~~~~~   93 (159)
                        +|+|..|++.|.....
T Consensus       110 ~k~~~C~~C~k~~~~~~~  127 (133)
T 2lt7_A          110 SKLYRLHPCRSLQIRQYA  127 (133)
T ss_dssp             SCCEEECCCCSSCCCCCH
T ss_pred             CCCeecCCCCchhhhccc
Confidence              5899999998876543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.1e-22  Score=122.88  Aligned_cols=87  Identities=26%  Similarity=0.561  Sum_probs=83.5

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhH
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHK   98 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   98 (159)
                      ++++|.|..|++.|.+...|..|++.|.+.++|.|..|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhCCch
Q psy16923         99 RRMHPEE  105 (159)
Q Consensus        99 ~~~h~~~  105 (159)
                      +.|+++.
T Consensus        85 ~~h~~~~   91 (96)
T 2dmd_A           85 RSHTGDS   91 (96)
T ss_dssp             TTCCSCC
T ss_pred             HHhcCCC
Confidence            9887654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=3.4e-24  Score=133.82  Aligned_cols=98  Identities=16%  Similarity=0.283  Sum_probs=89.4

Q ss_pred             HHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHh--cCCCCcee-cccccccc--CCHHhHHhHHhhcCCCCCccc
Q psy16923          8 KYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVV--HRDTKAYQ-CVTCGKSF--RRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus         8 ~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      ...|+.|+++| ++++|.|..|++.|.+...|..|++.  |.+.+++. |..|++.|  .+...|..|++.|.++++|.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            45688899999 89999999999999999999999998  76666654 99999999  899999999999999999999


Q ss_pred             ccCcccccCchhHHHhHHhhCCch
Q psy16923         82 PWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        82 ~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      .+|++.|.+...|..|++.+|...
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCCCccCCHHHHHHHHHHhCCcc
Confidence            999999999999999999888654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.87  E-value=5.3e-22  Score=122.03  Aligned_cols=87  Identities=25%  Similarity=0.606  Sum_probs=83.0

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhH
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHK   98 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   98 (159)
                      .+++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhCCch
Q psy16923         99 RRMHPEE  105 (159)
Q Consensus        99 ~~~h~~~  105 (159)
                      +.|+++.
T Consensus        94 ~~H~~~~  100 (106)
T 2ee8_A           94 TLHMQTS  100 (106)
T ss_dssp             HHTTSCC
T ss_pred             HHhCCCC
Confidence            9877543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.87  E-value=2e-22  Score=124.81  Aligned_cols=88  Identities=26%  Similarity=0.616  Sum_probs=83.6

Q ss_pred             hh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHH
Q psy16923         17 TH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCR   95 (159)
Q Consensus        17 ~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   95 (159)
                      .| ++++|.| .|++.|.+...|..|++.|.+.++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            46 7899999 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHhhCCch
Q psy16923         96 SHKRRMHPEE  105 (159)
Q Consensus        96 ~H~~~~h~~~  105 (159)
                      .|++.++...
T Consensus        83 ~H~~~~~~~~   92 (110)
T 2csh_A           83 RHVTSCTKSY   92 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHccccc
Confidence            9999887543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.87  E-value=3.6e-22  Score=134.86  Aligned_cols=122  Identities=20%  Similarity=0.459  Sum_probs=93.6

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccC--CCCcccCCCHHHHHHHHHhcCCCCceecc--ccccccCCHHhHHhHH-hhc-CC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHH-NLH-TG   75 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~   75 (159)
                      +.|.+...|..|++.| ++++|.|  +.|++.|.+...|..|++.|.++++|.|.  .|++.|.+...|..|+ +.| .+
T Consensus        22 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~  101 (190)
T 1tf6_A           22 AAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK  101 (190)
T ss_dssp             CBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTT
T ss_pred             chhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5678888888888888 7888888  77888888888888888888888888888  7888888888888888 456 35


Q ss_pred             CCCccc--ccCcccccCchhHHHhHHhhCCchhhhhhhc--ccccccccccccc
Q psy16923         76 KRPYTC--PWCSRTFANGSNCRSHKRRMHPEELKLYESS--LGIVHKEKKKFDV  125 (159)
Q Consensus        76 ~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~--~~~~~~~~~~~~~  125 (159)
                      .++|.|  ..|++.|.+...|..|++.|+++ ....+..  ++........+..
T Consensus       102 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~-~~~~C~~~~C~k~F~~~~~L~~  154 (190)
T 1tf6_A          102 ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ-LPYECPHEGCDKRFSLPSRLKR  154 (190)
T ss_dssp             TSCCEECSSSSCEECSSHHHHHHHHGGGSSS-CSSBCCSSSCCCBCSSHHHHHH
T ss_pred             cceeeCCCCCCccccCCHHHHHHHHHHhCCC-CCccCCCCCCCchhcCHHHHHH
Confidence            677888  77888888888888888865543 3455544  6666665544433

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.87  E-value=1.8e-22  Score=120.51  Aligned_cols=86  Identities=33%  Similarity=0.757  Sum_probs=80.2

Q ss_pred             CCCcccCC--CCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHH
Q psy16923         19 GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS   96 (159)
Q Consensus        19 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   96 (159)
                      ++++|.|+  .|++.|.+...|..|++.|.+.++|.|..|++.|.+...|..|++.|+++++|.|..|++.|.+...|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            47899998  5999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHhhCCc
Q psy16923         97 HKRRMHPE  104 (159)
Q Consensus        97 H~~~~h~~  104 (159)
                      |++.|+++
T Consensus        81 H~~~H~~~   88 (90)
T 1a1h_A           81 HTKIHLRQ   88 (90)
T ss_dssp             HHGGGGC-
T ss_pred             HHHHhccc
Confidence            99987754

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=3.1e-22  Score=130.91  Aligned_cols=101  Identities=32%  Similarity=0.729  Sum_probs=96.6

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCC--CcccCCCHHHHHHHHHhcCCCCceeccc--cccccCCHHhHHhHH-hhcCCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRRSKDLKNHH-NLHTGK   76 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~   76 (159)
                      +.|.+...|..|++.| ++++|.|+.  |++.|.+...|..|++.|.++++|.|..  |++.|.+...|..|+ +.|.++
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~  126 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE  126 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            6799999999999999 899999985  9999999999999999999999999998  999999999999999 789999


Q ss_pred             CCccccc--CcccccCchhHHHhHHhhCC
Q psy16923         77 RPYTCPW--CSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        77 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  103 (159)
                      ++|.|..  |++.|.+...|..|++.+|+
T Consensus       127 ~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          127 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999998  99999999999999998874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.86  E-value=2.2e-22  Score=118.06  Aligned_cols=81  Identities=36%  Similarity=0.814  Sum_probs=78.6

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhh
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      ||.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             C
Q psy16923        102 H  102 (159)
Q Consensus       102 h  102 (159)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=4.7e-22  Score=119.90  Aligned_cols=87  Identities=26%  Similarity=0.622  Sum_probs=82.1

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCC--CCcccccCcccccCchhHHH
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGK--RPYTCPWCSRTFANGSNCRS   96 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~   96 (159)
                      ++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|++.  ++|.|..|++.|.+...|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            5789999999999999999999999999999999999999999999999999999887  89999999999999999999


Q ss_pred             hHHhhCCch
Q psy16923         97 HKRRMHPEE  105 (159)
Q Consensus        97 H~~~~h~~~  105 (159)
                      |++..|..+
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            998777543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.86  E-value=2.3e-21  Score=130.91  Aligned_cols=115  Identities=29%  Similarity=0.561  Sum_probs=100.7

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCC--CCcccCCCHHHHHHHH-Hhc-CCCCceec--cccccccCCHHhHHhHHhhcCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCP--HCPMKLNTRRTLRMHL-VVH-RDTKAYQC--VTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      +.|.+...|..|+++| ++++|.|.  .|++.|.+...|..|+ +.| .+.++|.|  ..|++.|.+...|..|++.|++
T Consensus        52 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  131 (190)
T 1tf6_A           52 KGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ  131 (190)
T ss_dssp             CCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred             hhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence            6799999999999999 89999999  8999999999999999 566 46789999  8899999999999999999999


Q ss_pred             CCCccccc--CcccccCchhHHHhHHhhCCchhhhhhhc---ccccccccc
Q psy16923         76 KRPYTCPW--CSRTFANGSNCRSHKRRMHPEELKLYESS---LGIVHKEKK  121 (159)
Q Consensus        76 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~---~~~~~~~~~  121 (159)
                      +++|.|+.  |++.|.+...|..|++.|++    ..+..   ++.......
T Consensus       132 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~----~~C~~~~~C~~~f~~~~  178 (190)
T 1tf6_A          132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWT  178 (190)
T ss_dssp             SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS----CCCCSTTTCCCCCSCHH
T ss_pred             CCCccCCCCCCCchhcCHHHHHHHHHHhCC----CcCCCCCcCCCccccHH
Confidence            99999988  99999999999999997765    33444   555444433

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=2.6e-22  Score=123.74  Aligned_cols=90  Identities=22%  Similarity=0.348  Sum_probs=82.3

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCch
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGS   92 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   92 (159)
                      +++.| ++++|.|..|++.|.....|..|++.|.  ++|.|..|++.|.+...|..|++ |.++++|.|.+|++.|.+..
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHH
Confidence            45567 7899999999999999999999999984  68999999999999999999996 99999999999999999999


Q ss_pred             hHHHhHHhhCCchh
Q psy16923         93 NCRSHKRRMHPEEL  106 (159)
Q Consensus        93 ~l~~H~~~~h~~~~  106 (159)
                      .|..|++.+|..+.
T Consensus        84 ~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           84 SIWRHQVEVHNQNN   97 (107)
T ss_dssp             HHHHHHHHTSCCCC
T ss_pred             HHHHHHHHHcCCCC
Confidence            99999986776543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=3.8e-20  Score=116.52  Aligned_cols=106  Identities=26%  Similarity=0.491  Sum_probs=93.0

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhh---cCCCCCcccccCcccccCchhHH
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNL---HTGKRPYTCPWCSRTFANGSNCR   95 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~   95 (159)
                      ++++|.|+.|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.   +.++++|.|.+|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            578999999999999999999999999999999999999999999999999985   57789999999999999999999


Q ss_pred             HhHHhhCCchhhhhhhcccccccccccccc
Q psy16923         96 SHKRRMHPEELKLYESSLGIVHKEKKKFDV  125 (159)
Q Consensus        96 ~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~  125 (159)
                      .|++.|+++ ....+..++........+..
T Consensus        84 ~H~~~h~~~-~~~~C~~C~~~f~~~~~l~~  112 (124)
T 2dlq_A           84 LHMVSHTGE-MPYKCSSCSQQFMQKKDLQS  112 (124)
T ss_dssp             HHHHHHSSS-CSEECSSSCCEESSHHHHHH
T ss_pred             HHHHHcCCC-CCccCCCccchhCCHHHHHH
Confidence            999987654 45667777776666555443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.82  E-value=5.7e-20  Score=111.61  Aligned_cols=84  Identities=30%  Similarity=0.617  Sum_probs=79.8

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHHHhcCCCCceecc--ccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhH
Q psy16923         19 GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNC   94 (159)
Q Consensus        19 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   94 (159)
                      .+++|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.+...|..|++.|+++++|.|..|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            367899997  999999999999999999999999996  6999999999999999999999999999999999999999


Q ss_pred             HHhHHhhC
Q psy16923         95 RSHKRRMH  102 (159)
Q Consensus        95 ~~H~~~~h  102 (159)
                      ..|++.|.
T Consensus        92 ~~H~~~H~   99 (100)
T 2ebt_A           92 ALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.81  E-value=1.9e-21  Score=115.83  Aligned_cols=83  Identities=20%  Similarity=0.450  Sum_probs=79.1

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHH
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      ++||.|..|++.|.+...|..|+++|.++++|.|..|++.|.+...|..|++.|++ .+|.|..|++.|.+...|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            58999999999999999999999999999999999999999999999999999885 78999999999999999999999


Q ss_pred             hhCC
Q psy16923        100 RMHP  103 (159)
Q Consensus       100 ~~h~  103 (159)
                      .+|.
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8874

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.81  E-value=3.1e-20  Score=110.50  Aligned_cols=82  Identities=33%  Similarity=0.679  Sum_probs=78.4

Q ss_pred             CCcccCCC--CcccCCCHHHHHHHHHhcCCCCceecc--ccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHH
Q psy16923         20 ETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCR   95 (159)
Q Consensus        20 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   95 (159)
                      .++|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.+...|..|++.|+++++|.|..|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            56899999  999999999999999999999999997  69999999999999999999999999999999999999999


Q ss_pred             HhHHhh
Q psy16923         96 SHKRRM  101 (159)
Q Consensus        96 ~H~~~~  101 (159)
                      .|++.|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            999865

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=2.3e-20  Score=102.87  Aligned_cols=59  Identities=27%  Similarity=0.565  Sum_probs=50.5

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR   77 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   77 (159)
                      +|+||.|.+|++.|.+...|..|+++|.+++||.|..|++.|.....|..|++.|++++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            47888888888888888888888888888888888888888888888888888888763

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.81  E-value=3.5e-20  Score=115.91  Aligned_cols=102  Identities=29%  Similarity=0.576  Sum_probs=89.5

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHHHhcCCCCceecc--ccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhH
Q psy16923         19 GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNC   94 (159)
Q Consensus        19 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   94 (159)
                      ++++|.|..  |++.|.+...|..|++.|.+.++|.|.  .|++.|.+...|..|++.|+++++|.|..|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            578999997  999999999999999999999999999  7999999999999999999999999999999999999999


Q ss_pred             HHhHHhhCCchhhhhh--hcccccccccc
Q psy16923         95 RSHKRRMHPEELKLYE--SSLGIVHKEKK  121 (159)
Q Consensus        95 ~~H~~~~h~~~~~~~~--~~~~~~~~~~~  121 (159)
                      ..|++.|+++. ...+  ..++.......
T Consensus        83 ~~H~~~h~~~~-~~~C~~~~C~~~f~~~~  110 (119)
T 2jp9_A           83 KTHTRTHTGEK-PFSCRWPSCQKKFARSD  110 (119)
T ss_dssp             HHHHHHHHTCC-CEECCSTTCCCEESSHH
T ss_pred             HHHHHHhcCCC-CeeCCCCCCccccCCHH
Confidence            99999876543 3444  45555554433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=4e-19  Score=109.04  Aligned_cols=79  Identities=34%  Similarity=0.665  Sum_probs=75.4

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      +.|.....|..|++.| ++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|.++++|.+
T Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           25 RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            5789999999999999 789999999999999999999999999999999999999999999999999999999998864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.79  E-value=2.6e-19  Score=112.79  Aligned_cols=103  Identities=26%  Similarity=0.574  Sum_probs=87.1

Q ss_pred             CCCcccCC--CCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc--CcccccCchhH
Q psy16923         19 GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNC   94 (159)
Q Consensus        19 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   94 (159)
                      ++++|.|+  .|++.|.+...|..|++.| +.++|.|..|++.|.+...|..|++.|.++++|.|.+  |++.|.+...|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            36789999  8999999999999999999 7899999999999999999999999999999999986  99999999999


Q ss_pred             HHhHHhhCCchhhhhh--hcccccccccccc
Q psy16923         95 RSHKRRMHPEELKLYE--SSLGIVHKEKKKF  123 (159)
Q Consensus        95 ~~H~~~~h~~~~~~~~--~~~~~~~~~~~~~  123 (159)
                      ..|++.|+++. ...+  ..++........+
T Consensus        81 ~~H~~~h~~~~-~~~C~~~~C~~~f~~~~~L  110 (124)
T 1ubd_C           81 RTHVRIHTGDR-PYVCPFDGCNKKFAQSTNL  110 (124)
T ss_dssp             HHHHHHHHCCC-CCCCCSTTCCCCCSSTTTT
T ss_pred             HHHHHHhCCCC-ceECCCCCCCCccCCHHHH
Confidence            99999877553 3444  3466665555444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=8.4e-20  Score=107.91  Aligned_cols=79  Identities=28%  Similarity=0.528  Sum_probs=72.8

Q ss_pred             HHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCC----CceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         10 RLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDT----KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        10 ~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      +|.+|+++| ++++|.|..|++.|.+...|..|++.|+..    ++|.|..|++.|.+...|..|++.|++++++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            467899999 899999999999999999999999887765    789999999999999999999999999999999999


Q ss_pred             cccc
Q psy16923         85 SRTF   88 (159)
Q Consensus        85 ~~~f   88 (159)
                      +..|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.77  E-value=2.8e-19  Score=105.32  Aligned_cols=78  Identities=28%  Similarity=0.568  Sum_probs=74.6

Q ss_pred             cccC--CCCcccCCCHHHHHHHHHhcCCCCceeccc--cccccCCHHhHHhHHhhcCCCCCccccc---CcccccCchhH
Q psy16923         22 PYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRRSKDLKNHHNLHTGKRPYTCPW---CSRTFANGSNC   94 (159)
Q Consensus        22 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l   94 (159)
                      ||.|  +.|++.|.....|..|+++|.++++|.|..  |++.|.+...|..|++.|++   |.|..   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6899  899999999999999999999999999988  99999999999999999988   99999   99999999999


Q ss_pred             HHhHHhhC
Q psy16923         95 RSHKRRMH  102 (159)
Q Consensus        95 ~~H~~~~h  102 (159)
                      ..|++.+|
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=5.4e-19  Score=105.26  Aligned_cols=75  Identities=29%  Similarity=0.667  Sum_probs=70.5

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR   77 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   77 (159)
                      +.|.....|..|++.| ++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|++++
T Consensus        14 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           14 RRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            5788999999999999 89999999999999999999999999999999999999999999999999999998865

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.5e-18  Score=104.56  Aligned_cols=77  Identities=32%  Similarity=0.606  Sum_probs=73.0

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCc
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      +.|.+...|..|++.| ++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+++++.
T Consensus        16 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           16 KCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             BCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             CccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            5789999999999999 7899999999999999999999999999999999999999999999999999999987654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=1.2e-18  Score=101.94  Aligned_cols=73  Identities=33%  Similarity=0.681  Sum_probs=69.2

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      +.|.....|..|++.| ++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+|
T Consensus         9 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A            9 KSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             ccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            5688999999999999 899999999999999999999999999999999999999999999999999999864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=6.7e-19  Score=96.99  Aligned_cols=57  Identities=30%  Similarity=0.713  Sum_probs=54.2

Q ss_pred             CCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         48 TKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        48 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      ++||.|..|++.|.....|..|++.|++++||.|.+|++.|.+.+.|..|+++|.++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            689999999999999999999999999999999999999999999999999976654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.4e-18  Score=101.01  Aligned_cols=71  Identities=32%  Similarity=0.646  Sum_probs=67.5

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHHH-hcCCCCceeccc--cccccCCHHhHHhHHhhcCCCCCcccccCccccc
Q psy16923         19 GETPYGCPH--CPMKLNTRRTLRMHLV-VHRDTKAYQCVT--CGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFA   89 (159)
Q Consensus        19 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   89 (159)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|..  |++.|.+...|..|++.|+++++|.|.+|++.|.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            578999987  9999999999999999 799999999999  9999999999999999999999999999999884

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.74  E-value=2.8e-18  Score=112.11  Aligned_cols=80  Identities=33%  Similarity=0.700  Sum_probs=76.7

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCC--CcccCCCHHHHHHHHHhcCCCCceeccc--cccccCCHHhHHhHHhhcCCCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRRSKDLKNHHNLHTGKR   77 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   77 (159)
                      +.|.+...|..|++.| ++++|.|..  |++.|.+...|..|++.|.++++|.|..  |++.|.+...|..|++.|++++
T Consensus        70 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k  149 (155)
T 2rpc_A           70 KSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK  149 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCC
T ss_pred             cccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5789999999999999 899999998  9999999999999999999999999997  9999999999999999999999


Q ss_pred             Ccccc
Q psy16923         78 PYTCP   82 (159)
Q Consensus        78 ~~~C~   82 (159)
                      +|.|.
T Consensus       150 ~~~c~  154 (155)
T 2rpc_A          150 SGPSS  154 (155)
T ss_dssp             CSCSC
T ss_pred             CCCCC
Confidence            99985

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=8.4e-18  Score=103.36  Aligned_cols=78  Identities=15%  Similarity=0.318  Sum_probs=73.3

Q ss_pred             CCCCCHHHHHHHHHhhCCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHh-hcCCCCCccc
Q psy16923          3 SRFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHN-LHTGKRPYTC   81 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C   81 (159)
                      +.|.....|..|++.| +++|.|..|++.|.....|..|++ |.++++|.|..|++.|.+...|..|++ .|.++++|.|
T Consensus        24 ~~f~~~~~l~~H~~~H-~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           24 AKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             CBCSSHHHHHHHHHHH-HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             CccCCHHHHHHHHHHC-CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            5789999999999999 579999999999999999999996 999999999999999999999999997 8999999987


Q ss_pred             c
Q psy16923         82 P   82 (159)
Q Consensus        82 ~   82 (159)
                      .
T Consensus       102 ~  102 (107)
T 1wjp_A          102 S  102 (107)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.1e-17  Score=96.87  Aligned_cols=63  Identities=32%  Similarity=0.652  Sum_probs=60.5

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      ++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            689999999999999999999999999999999999999999999999999999999999987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.2e-17  Score=99.64  Aligned_cols=71  Identities=20%  Similarity=0.347  Sum_probs=44.3

Q ss_pred             CCCHHHHHHHHHhh-CCCcccCCCCcccC-CCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhH-HhhcCCC
Q psy16923          5 FKTKYRLKLHLDTH-GETPYGCPHCPMKL-NTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNH-HNLHTGK   76 (159)
Q Consensus         5 f~~~~~l~~H~~~h-~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   76 (159)
                      |.....|..|++.| ++++|.|+.|++.| .+..+|..|+++| ++++|.|..|++.|.....|..| ++.|++.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            44455566666665 56666666666666 6666666666666 66666666666666666666666 5556543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=2.5e-18  Score=104.20  Aligned_cols=73  Identities=21%  Similarity=0.332  Sum_probs=47.3

Q ss_pred             CHHHHHHHHHhh-CCCcccCCCCcccCC-CHHHHHHHHHhcCC-CCceeccccccccCCHHhHHhHHhhcCCCCCc
Q psy16923          7 TKYRLKLHLDTH-GETPYGCPHCPMKLN-TRRTLRMHLVVHRD-TKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus         7 ~~~~l~~H~~~h-~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      ....+..|++.| ++++|.|..|++.|. +...|..|+++|++ +++|.|..|++.|.+...|..|++.|+++++.
T Consensus         8 ~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            8 PGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            334455666666 566666666666666 66666666666665 66666666666666666666666666666554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=2e-17  Score=100.64  Aligned_cols=68  Identities=24%  Similarity=0.459  Sum_probs=62.6

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHH-hc---CCCCceeccccccccCCHHhHHhH-HhhcCCCCCcccccCcc
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLV-VH---RDTKAYQCVTCGKSFRRSKDLKNH-HNLHTGKRPYTCPWCSR   86 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~   86 (159)
                      +++||.|..|++.|.+...|..|++ .|   .++++|.|..|++.|.....|..| ++.|++++||.|.++..
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            6899999999999999999999998 58   568999999999999999999999 89999999999987543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.7e-17  Score=98.21  Aligned_cols=74  Identities=35%  Similarity=0.822  Sum_probs=68.7

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCC--CceeccccccccCCHHhHHhHHh-hcCCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDT--KAYQCVTCGKSFRRSKDLKNHHN-LHTGK   76 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   76 (159)
                      +.|.+...|..|++.| ++++|.|..|++.|.+...|..|++.|.+.  ++|.|..|++.|.+...|..|++ .|.+.
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           15 KIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             CEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            5688899999999999 799999999999999999999999999987  89999999999999999999996 57654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=4.4e-17  Score=98.73  Aligned_cols=73  Identities=36%  Similarity=0.670  Sum_probs=68.9

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCC--CCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      +.|.....|..|++.| ++++|.|.  .|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|.+
T Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           25 KVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            5688999999999999 79999996  6999999999999999999999999999999999999999999999864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.69  E-value=5.9e-17  Score=93.05  Aligned_cols=61  Identities=36%  Similarity=0.878  Sum_probs=53.7

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCc
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      ++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|++++||
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5788999999999999999999998888888899999999999999999998888888775

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=5.1e-17  Score=100.23  Aligned_cols=73  Identities=30%  Similarity=0.600  Sum_probs=69.2

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      +.|.+...|..|++.| ++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+.
T Consensus        17 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           17 KSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            5788999999999999 789999999999999999999999999999999999999999999999999998753

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.68  E-value=6.5e-17  Score=95.91  Aligned_cols=72  Identities=35%  Similarity=0.665  Sum_probs=67.9

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCC--CCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHT   74 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   74 (159)
                      +.|.....|..|++.| ++++|.|+  .|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|.
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           15 KTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             CEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            5688999999999999 79999997  599999999999999999999999999999999999999999999873

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.67  E-value=1.7e-18  Score=109.91  Aligned_cols=93  Identities=18%  Similarity=0.278  Sum_probs=77.4

Q ss_pred             HHHHHHHHhh----CCCcccCCCCcccC------CCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCC
Q psy16923          9 YRLKLHLDTH----GETPYGCPHCPMKL------NTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRP   78 (159)
Q Consensus         9 ~~l~~H~~~h----~~~~~~C~~C~~~f------~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   78 (159)
                      ..+..+.+.+    .++.+.|+.|+..|      .....|..|+ .|+++++|.|..|++.|.+...|..|++.|  +++
T Consensus        24 ~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~  100 (129)
T 2wbt_A           24 VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHT  100 (129)
T ss_dssp             CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCC
T ss_pred             ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCC
Confidence            3455554444    46778888776655      4677777777 588899999999999999999999999998  889


Q ss_pred             cccccCcccccCchhHHHhHHhhCCc
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      |.|..|++.|.+...|..|++.+|+.
T Consensus       101 ~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          101 KVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            99999999999999999999998865

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=8.1e-18  Score=101.96  Aligned_cols=75  Identities=16%  Similarity=0.261  Sum_probs=68.0

Q ss_pred             cCCCHHHHHHHHHhcCCCCceeccccccccC-CHHhHHhHHhhcCC-CCCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         31 KLNTRRTLRMHLVVHRDTKAYQCVTCGKSFR-RSKDLKNHHNLHTG-KRPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        31 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      .+.....+..|++.|.++++|.|..|++.|. +...|..|++.|++ +++|.|.+|++.|.+...|..|++.+|++.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            3444556778999999999999999999999 99999999999998 899999999999999999999999998654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=7.9e-17  Score=92.05  Aligned_cols=59  Identities=41%  Similarity=0.849  Sum_probs=29.6

Q ss_pred             hcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        44 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      +|.++++|.|..|++.|.+...|..|++.|.++++|.|.+|++.|.+...|..|++.|+
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            34444455555555555555555555555544555555555555555555555554443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.64  E-value=1.8e-16  Score=93.25  Aligned_cols=62  Identities=24%  Similarity=0.562  Sum_probs=41.8

Q ss_pred             hcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        44 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      .+...++|.|+.|++.|.+...|..|++.|++++||.|.+|++.|.+...|..|++..|..+
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            34445566777777777777777777777777777777777777777777777766556443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.7e-17  Score=94.61  Aligned_cols=63  Identities=30%  Similarity=0.560  Sum_probs=30.2

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHh-hcCCC-CCcccccCcccccCchhHHHhHHhhCC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHN-LHTGK-RPYTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      |+++|.++++|.|..|++.|.+...|..|++ .|.++ ++|.|..|++.|.+...|..|++.+|+
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4444444444444444444444444444443 23332 445555555555555555555554443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=4.1e-17  Score=94.45  Aligned_cols=66  Identities=27%  Similarity=0.571  Sum_probs=59.4

Q ss_pred             HHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHH-hcCCC-CceeccccccccCCHHhHHhHHhhcCC
Q psy16923         10 RLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLV-VHRDT-KAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        10 ~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      +|.+|+++| ++++|.|..|++.|.+...|..|++ .|.++ ++|.|..|++.|.+...|..|++.+++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            356789999 8999999999999999999999997 67764 899999999999999999999998554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.9e-16  Score=89.91  Aligned_cols=60  Identities=20%  Similarity=0.526  Sum_probs=35.4

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRP   78 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   78 (159)
                      ++++|.|..|++.|.+...|..|+++|.++++|.|..|++.|.+...|..|++.|+++++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            455566666666666666666666666555556666666666666666666555555543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.3e-16  Score=91.17  Aligned_cols=63  Identities=38%  Similarity=0.788  Sum_probs=58.8

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCC
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR   77 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   77 (159)
                      .++| ++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4567 79999999999999999999999999999999999999999999999999999987653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.63  E-value=3.8e-16  Score=85.02  Aligned_cols=55  Identities=24%  Similarity=0.476  Sum_probs=35.3

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHT   74 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   74 (159)
                      +++|.|..|++.|.+...|..|+++|.++++|.|..|++.|.+...|..|++.|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4566777777777777777777666666666666666666666666666666554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.7e-16  Score=94.86  Aligned_cols=72  Identities=17%  Similarity=0.264  Sum_probs=66.1

Q ss_pred             cccCCCHHHHHHHHHhcCCCCceecccccccc-CCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHh-HHhh
Q psy16923         29 PMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSF-RRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH-KRRM  101 (159)
Q Consensus        29 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~  101 (159)
                      ...|.....|..|++.|.++++|.|..|++.| .+...|..|++.| ++++|.|.+|++.|.....|..| ++.|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            34667778899999999999999999999999 9999999999999 99999999999999999999999 6654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=6.1e-16  Score=87.80  Aligned_cols=62  Identities=24%  Similarity=0.515  Sum_probs=58.3

Q ss_pred             hcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        44 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      .|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|++.++++.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            46788999999999999999999999999999999999999999999999999999988654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.6e-16  Score=87.70  Aligned_cols=59  Identities=22%  Similarity=0.634  Sum_probs=31.9

Q ss_pred             hcCCCCceeccccccccCCHHhHHhHHhh-c-CCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNL-H-TGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        44 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      +|.++++|.|..|++.|.+...|..|++. | .++++|.|+.|++.|.+...|..|++.+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            34455555555555555555555555554 4 34555555555555555555555555554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.61  E-value=1.6e-15  Score=82.52  Aligned_cols=56  Identities=25%  Similarity=0.623  Sum_probs=44.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCC
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR   77 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   77 (159)
                      ||.|..|++.|.+...|..|+++|.++++|.|..|++.|.+...|..|++.|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57788888888888888888888887788888888888888888888887776654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.61  E-value=1.2e-15  Score=89.51  Aligned_cols=69  Identities=29%  Similarity=0.518  Sum_probs=65.0

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCC--CcccCCCHHHHHHHHHhcCCCCceeccc---cccccCCHHhHHhHHhhcC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVT---CGKSFRRSKDLKNHHNLHT   74 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~   74 (159)
                      +.|.....|..|+++| ++++|.|+.  |++.|.+...|..|+++|.+   |.|..   |++.|.+...|..|++.|+
T Consensus        11 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           11 KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            5688899999999999 899999998  99999999999999999987   99999   9999999999999999874

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.60  E-value=5.1e-16  Score=84.50  Aligned_cols=57  Identities=35%  Similarity=0.693  Sum_probs=50.9

Q ss_pred             CCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCC
Q psy16923         47 DTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        47 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      |+++|.|..|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|++.+|.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999999999999999999999998873

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=1.2e-15  Score=89.68  Aligned_cols=59  Identities=22%  Similarity=0.440  Sum_probs=54.6

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHh-hcCCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHN-LHTGKR   77 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~   77 (159)
                      ..++|.|++|++.|.+...|..|+++|+++++|.|..|++.|.+...|..|++ .|.++.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            57889999999999999999999999999999999999999999999999975 577653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=6.6e-16  Score=86.60  Aligned_cols=60  Identities=30%  Similarity=0.558  Sum_probs=55.6

Q ss_pred             Hhh-CCCcccCCCCcccCCCHHHHHHHHHh-c-CCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923         16 DTH-GETPYGCPHCPMKLNTRRTLRMHLVV-H-RDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        16 ~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      ++| ++++|.|+.|++.|.+..+|..|++. | .++++|.|+.|++.|.+...|..|++.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            457 79999999999999999999999998 7 588999999999999999999999998765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=5.6e-16  Score=89.78  Aligned_cols=61  Identities=23%  Similarity=0.586  Sum_probs=42.1

Q ss_pred             cCCCCceeccccccccCCHHhHHhHHhhcCC---CCCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG---KRPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        45 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      |.++++|.|..|++.|.+...|..|++.|++   +++|.|.+|++.|.+...|..|++.+|...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            5566667777777777777777777666664   667777777777777777777776666554

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.59  E-value=2e-15  Score=95.60  Aligned_cols=71  Identities=18%  Similarity=0.347  Sum_probs=64.5

Q ss_pred             CCCCHHHHHHHHHhhCCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCC
Q psy16923          4 RFKTKYRLKLHLDTHGETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus         4 ~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   76 (159)
                      .|.....|..|++.++++||.|..|++.|.....|..|+++|  +++|.|..|++.|.+...|..|++.|++.
T Consensus        56 ~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             GTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             ccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            456777888888544899999999999999999999999999  78999999999999999999999999875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=3.5e-16  Score=97.15  Aligned_cols=80  Identities=21%  Similarity=0.339  Sum_probs=69.9

Q ss_pred             CCCCCHHHHHHHHHh--h-CCCcc-cCCCCcccC--CCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCC
Q psy16923          3 SRFKTKYRLKLHLDT--H-GETPY-GCPHCPMKL--NTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~--h-~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   76 (159)
                      +.|.....|..|++.  | +++++ .|..|++.|  .....|..|+++|.++++|.|..|++.|.+...|..|++.|+..
T Consensus        27 k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           27 AAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             chhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence            578899999999998  6 45554 599999999  89999999999999999999999999999999999999997766


Q ss_pred             CCcccc
Q psy16923         77 RPYTCP   82 (159)
Q Consensus        77 ~~~~C~   82 (159)
                      ....++
T Consensus       107 ~~~~~~  112 (115)
T 2dmi_A          107 QKVSGP  112 (115)
T ss_dssp             TCSCCC
T ss_pred             ccCCCC
Confidence            554443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=1.1e-18  Score=99.84  Aligned_cols=70  Identities=20%  Similarity=0.286  Sum_probs=63.4

Q ss_pred             HHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923          8 KYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus         8 ~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      ...|..|+++| ++++|.|..|++.|.....|..       +++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            45688899999 8999999999999998887765       6789999999999999999999999999999999987

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=6.5e-16  Score=90.97  Aligned_cols=68  Identities=22%  Similarity=0.434  Sum_probs=61.9

Q ss_pred             HHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCC----CCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         38 LRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGK----RPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        38 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      |..|+++|.++++|.|..|++.|.+...|..|++.|+..    ++|.|..|++.|.+...|..|++.++++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCC
Confidence            456899999999999999999999999999999887665    78999999999999999999999887654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=3.3e-15  Score=85.63  Aligned_cols=62  Identities=34%  Similarity=0.724  Sum_probs=57.3

Q ss_pred             HhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         43 VVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        43 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      ..+.++++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            34667899999999999999999999999999999999999999999999999999987754

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=8.8e-15  Score=80.36  Aligned_cols=55  Identities=27%  Similarity=0.643  Sum_probs=36.8

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHH-hhcCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHH-NLHTG   75 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~   75 (159)
                      +||.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|+ +.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            45667777777777777777777766666666766666666666666665 34544

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.55  E-value=4.7e-16  Score=92.19  Aligned_cols=71  Identities=20%  Similarity=0.307  Sum_probs=66.2

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcC
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHT   74 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   74 (159)
                      +.|.....|..|+++| ++++|.|+.|++.|.+...|..|++.|++ .++.|..|++.|.+...|..|++.++
T Consensus        11 k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           11 RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             CEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            5788999999999999 89999999999999999999999999885 78999999999999999999998643

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4.2e-15  Score=86.12  Aligned_cols=59  Identities=29%  Similarity=0.607  Sum_probs=55.4

Q ss_pred             CCCCCHHHHHHHHH-hh-CCCcccCCC--CcccCCCHHHHHHHHHhcCCCCceeccccccccC
Q psy16923          3 SRFKTKYRLKLHLD-TH-GETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFR   61 (159)
Q Consensus         3 ~~f~~~~~l~~H~~-~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   61 (159)
                      +.|.....|..|++ .| ++++|.|..  |++.|.+...|..|+++|.++++|.|..|++.|.
T Consensus        17 ~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           17 RIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            56889999999999 68 899999999  9999999999999999999999999999999873

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.55  E-value=5.7e-15  Score=80.27  Aligned_cols=55  Identities=31%  Similarity=0.670  Sum_probs=52.2

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      ||.|..|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++.++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            5899999999999999999999999999999999999999999999999987754

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=6.6e-15  Score=80.88  Aligned_cols=57  Identities=30%  Similarity=0.748  Sum_probs=52.5

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      ++|.|..|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++..|..+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            478999999999999999999999999999999999999999999999986666543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=6.4e-15  Score=85.25  Aligned_cols=63  Identities=21%  Similarity=0.464  Sum_probs=56.8

Q ss_pred             h-CCCcccCCCCcccCCCHHHHHHHHHhcCC---CCceeccccccccCCHHhHHhHHh-hcCCCCCcc
Q psy16923         18 H-GETPYGCPHCPMKLNTRRTLRMHLVVHRD---TKAYQCVTCGKSFRRSKDLKNHHN-LHTGKRPYT   80 (159)
Q Consensus        18 h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~   80 (159)
                      | ++++|.|.+|++.|.+...|..|++.|.+   +++|.|..|++.|.+...|..|++ .|.+.++..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            5 78999999999999999999999999985   899999999999999999999995 476666554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=8.7e-15  Score=84.49  Aligned_cols=61  Identities=38%  Similarity=0.784  Sum_probs=56.6

Q ss_pred             hcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        44 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      .+.++++|.|..|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|++.|+++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   72 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS   72 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCC
Confidence            4567889999999999999999999999999999999999999999999999999987654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=2.5e-14  Score=85.66  Aligned_cols=63  Identities=25%  Similarity=0.390  Sum_probs=57.4

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHh-cCCCCc--------eeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVV-HRDTKA--------YQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      ...|.|..|++.|.+...|..|++. |.+.++        |.|..|++.|.+...|..|++.|+++++|.|.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3457799999999999999999998 888777        89999999999999999999999999999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=9.2e-15  Score=83.47  Aligned_cols=55  Identities=33%  Similarity=0.746  Sum_probs=34.1

Q ss_pred             CCCcccCC--CCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhc
Q psy16923         19 GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLH   73 (159)
Q Consensus        19 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   73 (159)
                      ++++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.+...|..|++.|
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            45666664  36666666666666666666666666666666666666666666554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=5e-14  Score=80.36  Aligned_cols=64  Identities=31%  Similarity=0.723  Sum_probs=56.2

Q ss_pred             HHHHHH-hcCCCCceecc--ccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhh
Q psy16923         38 LRMHLV-VHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        38 l~~H~~-~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      +..|.. .|.++++|.|.  .|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            444444 57788999997  59999999999999999999999999999999999999999999865

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=6e-14  Score=78.59  Aligned_cols=57  Identities=19%  Similarity=0.316  Sum_probs=35.1

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc-ccccccCCHHhHHhHHhhcCCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV-TCGKSFRRSKDLKNHHNLHTGKR   77 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~   77 (159)
                      .+++|.|..|++.|. ...|..|+++ .++++|.|. .|++.|.....|..|++.|...+
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            355666666666666 6666666666 566666666 66666666666666666555443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.2e-13  Score=83.92  Aligned_cols=66  Identities=18%  Similarity=0.269  Sum_probs=55.6

Q ss_pred             cCCCCceeccccccccCCHHhHHhHHh-hc---CCCCCcccccCcccccCchhHHHh-HHhhCCchhhhhhh
Q psy16923         45 HRDTKAYQCVTCGKSFRRSKDLKNHHN-LH---TGKRPYTCPWCSRTFANGSNCRSH-KRRMHPEELKLYES  111 (159)
Q Consensus        45 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~~~~  111 (159)
                      ..|+++|.|..|++.|.+...|..|++ .|   .++++|.|..|++.|.+...|..| ++. |.++..+.+.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~-Htgekpy~C~   83 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY-HPGEENFKLT   83 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHT-STTCCCEEEE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh-cCCCCCeeCC
Confidence            457899999999999999999999998 48   568999999999999999999999 565 5444444443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=9.9e-14  Score=71.97  Aligned_cols=43  Identities=21%  Similarity=0.296  Sum_probs=27.5

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            45555 56666666666666666666666666666666666655

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1e-13  Score=71.94  Aligned_cols=43  Identities=21%  Similarity=0.353  Sum_probs=24.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44445 45555555555555555555555555555555555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.39  E-value=1e-13  Score=71.92  Aligned_cols=43  Identities=26%  Similarity=0.415  Sum_probs=25.7

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            44555 55666666666666666666666666666666666554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.39  E-value=1.3e-13  Score=71.61  Aligned_cols=43  Identities=26%  Similarity=0.394  Sum_probs=26.7

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555 56666666666666666666666666666666666554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=71.43  Aligned_cols=43  Identities=23%  Similarity=0.399  Sum_probs=28.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55556 56666666666666666666666666666666666655

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=71.73  Aligned_cols=43  Identities=21%  Similarity=0.362  Sum_probs=24.8

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44455 45556666666666666666666555555555555554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=71.32  Aligned_cols=43  Identities=23%  Similarity=0.442  Sum_probs=28.4

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55556 56666666666666666666666666666666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=71.48  Aligned_cols=43  Identities=26%  Similarity=0.515  Sum_probs=24.7

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44455 45556666666666666666666555555555555554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=71.39  Aligned_cols=43  Identities=26%  Similarity=0.400  Sum_probs=27.5

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555 56666666666666666666666666666666666654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=8.1e-14  Score=71.64  Aligned_cols=42  Identities=24%  Similarity=0.491  Sum_probs=21.4

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444 44555555555555555555555555555555555443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=71.37  Aligned_cols=43  Identities=19%  Similarity=0.307  Sum_probs=25.1

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+..+|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555 45566666666666666666666666655555555554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.3e-13  Score=71.61  Aligned_cols=43  Identities=30%  Similarity=0.393  Sum_probs=24.1

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34445 45555555555555555555555555555555555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=71.66  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=20.7

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444 44445555555555555555555544444444444443

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=71.84  Aligned_cols=44  Identities=30%  Similarity=0.574  Sum_probs=22.1

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            34444445555555555555555555555555555555555444

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1e-13  Score=71.90  Aligned_cols=43  Identities=21%  Similarity=0.280  Sum_probs=21.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444 44455555555555555555555555544444444443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1e-13  Score=71.90  Aligned_cols=44  Identities=32%  Similarity=0.568  Sum_probs=23.0

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.37  E-value=1e-13  Score=71.97  Aligned_cols=43  Identities=23%  Similarity=0.428  Sum_probs=23.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444 45555555555555555555555555555555555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.1e-13  Score=70.76  Aligned_cols=44  Identities=30%  Similarity=0.560  Sum_probs=25.9

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555566666666666666666666666665566665554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.6e-13  Score=71.14  Aligned_cols=43  Identities=23%  Similarity=0.334  Sum_probs=21.3

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444 44555555555555555555555555555555554443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=71.28  Aligned_cols=44  Identities=32%  Similarity=0.588  Sum_probs=21.0

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=71.38  Aligned_cols=43  Identities=19%  Similarity=0.351  Sum_probs=27.8

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555 56666666666666666666666666666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.7e-13  Score=71.10  Aligned_cols=43  Identities=28%  Similarity=0.507  Sum_probs=20.7

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444444444444444444444444444444444444444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.37  E-value=1.2e-13  Score=71.62  Aligned_cols=44  Identities=32%  Similarity=0.590  Sum_probs=22.2

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.37  E-value=1.1e-13  Score=71.85  Aligned_cols=44  Identities=27%  Similarity=0.402  Sum_probs=24.8

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.2e-13  Score=71.64  Aligned_cols=43  Identities=23%  Similarity=0.372  Sum_probs=21.6

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444 44555555555555555555555555555555555443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=71.42  Aligned_cols=43  Identities=21%  Similarity=0.395  Sum_probs=21.8

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34444 44555555555555555555555555555555555443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.2e-13  Score=71.77  Aligned_cols=44  Identities=20%  Similarity=0.351  Sum_probs=41.2

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      .|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            377888 89999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.4e-13  Score=70.50  Aligned_cols=45  Identities=29%  Similarity=0.533  Sum_probs=42.2

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            377889999999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.4e-13  Score=70.52  Aligned_cols=44  Identities=25%  Similarity=0.455  Sum_probs=41.0

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            477888 89999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.2e-13  Score=71.68  Aligned_cols=44  Identities=34%  Similarity=0.569  Sum_probs=24.5

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555555544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=71.39  Aligned_cols=44  Identities=34%  Similarity=0.596  Sum_probs=22.4

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555444

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.2e-13  Score=71.74  Aligned_cols=43  Identities=23%  Similarity=0.389  Sum_probs=22.3

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444 45555555555555555555555555555555555444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=70.43  Aligned_cols=45  Identities=31%  Similarity=0.540  Sum_probs=42.3

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.36  E-value=2.4e-13  Score=70.44  Aligned_cols=44  Identities=23%  Similarity=0.417  Sum_probs=40.9

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888 79999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.4e-13  Score=70.50  Aligned_cols=44  Identities=23%  Similarity=0.349  Sum_probs=41.0

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      .|+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            377888 79999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2e-13  Score=70.10  Aligned_cols=44  Identities=20%  Similarity=0.312  Sum_probs=41.3

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56789999999999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.8e-13  Score=71.02  Aligned_cols=42  Identities=21%  Similarity=0.308  Sum_probs=20.7

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3444 44555555555555555555555555555455554443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=71.35  Aligned_cols=43  Identities=23%  Similarity=0.393  Sum_probs=20.9

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            34444 44455555555555555555555555544444444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.1e-13  Score=71.80  Aligned_cols=43  Identities=28%  Similarity=0.433  Sum_probs=23.2

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44445 45555555555555555555555555555555555544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2e-13  Score=70.83  Aligned_cols=43  Identities=19%  Similarity=0.144  Sum_probs=23.3

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444 45555555555555555555555555555555555544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.4e-13  Score=71.46  Aligned_cols=44  Identities=30%  Similarity=0.507  Sum_probs=23.2

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.2e-13  Score=71.61  Aligned_cols=43  Identities=26%  Similarity=0.388  Sum_probs=21.8

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444 44555555555555555555555555555555555443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.36  E-value=1.5e-13  Score=71.27  Aligned_cols=44  Identities=32%  Similarity=0.544  Sum_probs=25.1

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.6e-13  Score=71.14  Aligned_cols=44  Identities=23%  Similarity=0.309  Sum_probs=21.7

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444455555555555555555555555555555555443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.7e-13  Score=70.30  Aligned_cols=44  Identities=23%  Similarity=0.386  Sum_probs=40.9

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788 79999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=3.1e-13  Score=70.08  Aligned_cols=43  Identities=30%  Similarity=0.466  Sum_probs=40.3

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788 79999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=70.39  Aligned_cols=45  Identities=33%  Similarity=0.526  Sum_probs=42.1

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.1e-13  Score=70.07  Aligned_cols=44  Identities=23%  Similarity=0.427  Sum_probs=41.0

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      .|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888 89999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.4e-13  Score=69.93  Aligned_cols=44  Identities=25%  Similarity=0.384  Sum_probs=40.9

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478888 79999999999999999999999999999999999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.36  E-value=2.6e-13  Score=70.39  Aligned_cols=45  Identities=22%  Similarity=0.428  Sum_probs=42.1

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477889999999999999999999999999999999999999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=70.41  Aligned_cols=45  Identities=29%  Similarity=0.462  Sum_probs=42.3

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.35  E-value=3.2e-13  Score=70.01  Aligned_cols=44  Identities=25%  Similarity=0.345  Sum_probs=40.7

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      .|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            377888 79999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.35  E-value=2.8e-13  Score=70.24  Aligned_cols=44  Identities=20%  Similarity=0.312  Sum_probs=40.9

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888 79999999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.8e-13  Score=69.73  Aligned_cols=44  Identities=27%  Similarity=0.554  Sum_probs=26.1

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555666666666666666666666666666666666554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.6e-13  Score=69.81  Aligned_cols=45  Identities=31%  Similarity=0.490  Sum_probs=42.3

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.9e-13  Score=70.16  Aligned_cols=44  Identities=27%  Similarity=0.557  Sum_probs=41.7

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.3e-13  Score=69.99  Aligned_cols=44  Identities=27%  Similarity=0.424  Sum_probs=41.7

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.35  E-value=2.5e-13  Score=70.43  Aligned_cols=45  Identities=29%  Similarity=0.544  Sum_probs=42.1

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      +|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-13  Score=71.15  Aligned_cols=44  Identities=23%  Similarity=0.394  Sum_probs=41.6

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478888 89999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.9e-13  Score=70.19  Aligned_cols=44  Identities=14%  Similarity=0.179  Sum_probs=41.0

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888 79999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3e-13  Score=70.10  Aligned_cols=45  Identities=29%  Similarity=0.408  Sum_probs=42.1

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=5.7e-13  Score=74.52  Aligned_cols=56  Identities=18%  Similarity=0.402  Sum_probs=51.7

Q ss_pred             CCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc-cCcccccCchhHHHhHHhhCC
Q psy16923         46 RDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP-WCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        46 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      -+.++|.|..|++.|. ...|..|++. ++++||.|+ .|++.|.....|..|++.|-+
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            4578999999999999 9999999999 999999999 999999999999999997544

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=70.12  Aligned_cols=44  Identities=25%  Similarity=0.452  Sum_probs=41.7

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.35  E-value=2.4e-13  Score=70.54  Aligned_cols=43  Identities=26%  Similarity=0.390  Sum_probs=21.3

Q ss_pred             HHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         42 LVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        42 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      +++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444455555555555555555555555555555555443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.7e-13  Score=70.33  Aligned_cols=45  Identities=27%  Similarity=0.489  Sum_probs=42.1

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.35  E-value=1.1e-12  Score=74.45  Aligned_cols=53  Identities=26%  Similarity=0.527  Sum_probs=28.2

Q ss_pred             CCcccCCC--CcccCCCHHHHHHHHHhcCCCCceeccc--cccccCCHHhHHhHHhh
Q psy16923         20 ETPYGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCVT--CGKSFRRSKDLKNHHNL   72 (159)
Q Consensus        20 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~   72 (159)
                      .++|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|++.
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            44555554  5555555555555555555555555533  55555555555555443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=70.06  Aligned_cols=45  Identities=27%  Similarity=0.411  Sum_probs=42.0

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            377889999999999999999999999999999999999999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.6e-13  Score=70.35  Aligned_cols=45  Identities=31%  Similarity=0.550  Sum_probs=42.1

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=70.08  Aligned_cols=44  Identities=30%  Similarity=0.530  Sum_probs=26.4

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44555556666666666666666666666666666666666554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-13  Score=71.21  Aligned_cols=44  Identities=20%  Similarity=0.286  Sum_probs=22.9

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555444

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.1e-13  Score=70.05  Aligned_cols=45  Identities=33%  Similarity=0.581  Sum_probs=42.2

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.4e-13  Score=71.42  Aligned_cols=43  Identities=28%  Similarity=0.468  Sum_probs=40.8

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            67788 89999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.34  E-value=2.4e-13  Score=70.52  Aligned_cols=44  Identities=36%  Similarity=0.640  Sum_probs=41.4

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.1e-13  Score=70.04  Aligned_cols=45  Identities=29%  Similarity=0.556  Sum_probs=42.2

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.2e-13  Score=69.97  Aligned_cols=45  Identities=31%  Similarity=0.457  Sum_probs=42.0

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      +|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.7e-13  Score=69.75  Aligned_cols=44  Identities=23%  Similarity=0.271  Sum_probs=40.9

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888 79999999999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.7e-13  Score=71.10  Aligned_cols=44  Identities=30%  Similarity=0.489  Sum_probs=22.6

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555444

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.5e-13  Score=70.42  Aligned_cols=45  Identities=29%  Similarity=0.474  Sum_probs=42.2

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      +|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=4.1e-13  Score=69.59  Aligned_cols=44  Identities=23%  Similarity=0.435  Sum_probs=41.7

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.9e-13  Score=70.18  Aligned_cols=44  Identities=27%  Similarity=0.520  Sum_probs=29.5

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.3e-13  Score=70.24  Aligned_cols=43  Identities=21%  Similarity=0.316  Sum_probs=23.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHH-hcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLV-VHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|++ +|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            34444 4555555555555555555555555 5555555555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.5e-13  Score=70.44  Aligned_cols=45  Identities=27%  Similarity=0.526  Sum_probs=42.1

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2e-13  Score=70.86  Aligned_cols=42  Identities=29%  Similarity=0.420  Sum_probs=21.8

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3444 45555555555555555555555555555555555444

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.5e-13  Score=69.86  Aligned_cols=44  Identities=25%  Similarity=0.315  Sum_probs=40.6

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788 79999999999999999999999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-13  Score=70.32  Aligned_cols=45  Identities=22%  Similarity=0.329  Sum_probs=41.9

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.33  E-value=5.2e-13  Score=69.22  Aligned_cols=43  Identities=21%  Similarity=0.383  Sum_probs=40.4

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788 89999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.8e-13  Score=70.21  Aligned_cols=43  Identities=30%  Similarity=0.595  Sum_probs=23.3

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4445555555555555555555555555555555555555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.9e-13  Score=69.30  Aligned_cols=44  Identities=25%  Similarity=0.412  Sum_probs=40.2

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888 79999999999999999999999999999999999865

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4.4e-13  Score=69.49  Aligned_cols=44  Identities=25%  Similarity=0.315  Sum_probs=41.6

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|+|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.8e-13  Score=69.72  Aligned_cols=44  Identities=25%  Similarity=0.440  Sum_probs=40.7

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      .|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            467788 79999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-13  Score=71.68  Aligned_cols=44  Identities=30%  Similarity=0.529  Sum_probs=24.4

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.3e-13  Score=71.54  Aligned_cols=44  Identities=27%  Similarity=0.390  Sum_probs=41.3

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888 79999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.6e-13  Score=70.40  Aligned_cols=44  Identities=25%  Similarity=0.352  Sum_probs=40.4

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467788 79999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.4e-13  Score=69.98  Aligned_cols=44  Identities=32%  Similarity=0.576  Sum_probs=41.4

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.32  E-value=1.5e-12  Score=73.89  Aligned_cols=57  Identities=35%  Similarity=0.861  Sum_probs=52.0

Q ss_pred             cCCCCceeccc--cccccCCHHhHHhHHhhcCCCCCccccc--CcccccCchhHHHhHHhh
Q psy16923         45 HRDTKAYQCVT--CGKSFRRSKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        45 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  101 (159)
                      ....++|.|..  |++.|.+...|..|++.|+++++|.|.+  |++.|.+...|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45568899998  9999999999999999999999999975  999999999999998753

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.5e-13  Score=69.46  Aligned_cols=42  Identities=24%  Similarity=0.430  Sum_probs=21.2

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34444 4455555555555555555555555555555555543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.8e-13  Score=69.35  Aligned_cols=44  Identities=32%  Similarity=0.549  Sum_probs=41.5

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.31  E-value=2.2e-12  Score=69.19  Aligned_cols=44  Identities=34%  Similarity=0.650  Sum_probs=22.9

Q ss_pred             CCCCceeccccccccCCHHhHHhHHh-hcCCCCCcccccCccccc
Q psy16923         46 RDTKAYQCVTCGKSFRRSKDLKNHHN-LHTGKRPYTCPWCSRTFA   89 (159)
Q Consensus        46 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~   89 (159)
                      .++++|.|..|++.|.+...|..|++ .|.++++|.|.+|++.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            34445555555555555555555554 455555555555555554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.1e-12  Score=66.55  Aligned_cols=40  Identities=23%  Similarity=0.438  Sum_probs=26.7

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34556 56667777777777777777777666666666665

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.9e-13  Score=68.76  Aligned_cols=45  Identities=29%  Similarity=0.530  Sum_probs=41.9

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHh-hcCCCCCcccccC
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHN-LHTGKRPYTCPWC   84 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C   84 (159)
                      .|+++|.++++|.|..|++.|.....|..|++ .|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            37788999999999999999999999999999 9999999999887

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.30  E-value=3.5e-13  Score=72.39  Aligned_cols=49  Identities=27%  Similarity=0.330  Sum_probs=33.0

Q ss_pred             CCCCCHHHHHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCce
Q psy16923          3 SRFKTKYRLKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAY   51 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   51 (159)
                      |.|.....|..|+++| ++++|.|..|++.|.....|..|+++|.++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            4556666666677776 566777777777777777777777777666654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=1.8e-12  Score=69.56  Aligned_cols=44  Identities=20%  Similarity=0.368  Sum_probs=41.8

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHH-hcCCCCceeccccccccCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLV-VHRDTKAYQCVTCGKSFRR   62 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~   62 (159)
                      ++++|.|..|++.|.+...|..|++ +|.++++|.|..|++.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            6899999999999999999999997 8999999999999999975

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=68.07  Aligned_cols=44  Identities=30%  Similarity=0.559  Sum_probs=40.9

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999865

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.1e-12  Score=67.87  Aligned_cols=41  Identities=24%  Similarity=0.382  Sum_probs=25.2

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            45555 566666666666666666666666666666666654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=67.72  Aligned_cols=41  Identities=20%  Similarity=0.415  Sum_probs=24.4

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555 456666666666666666666666666666665554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.28  E-value=9.8e-13  Score=66.74  Aligned_cols=39  Identities=28%  Similarity=0.618  Sum_probs=18.9

Q ss_pred             HhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         43 VVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        43 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      ++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344444444454455444444444455444444444444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=67.58  Aligned_cols=41  Identities=24%  Similarity=0.390  Sum_probs=25.3

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45555 566666666666666666666666666666666654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=67.60  Aligned_cols=41  Identities=24%  Similarity=0.394  Sum_probs=25.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            44555 566666666666666666666666666666666554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.7e-12  Score=67.26  Aligned_cols=41  Identities=22%  Similarity=0.374  Sum_probs=25.6

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45555 566666666666666666666666666666666654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.1e-12  Score=68.03  Aligned_cols=41  Identities=24%  Similarity=0.401  Sum_probs=21.3

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            34444 455555555555555555555555555555555543

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.7e-12  Score=67.15  Aligned_cols=41  Identities=22%  Similarity=0.450  Sum_probs=25.4

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45555 566666666666666666666666666666666654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.27  E-value=9.5e-13  Score=68.21  Aligned_cols=41  Identities=22%  Similarity=0.420  Sum_probs=20.5

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444 445555555555555555555555555555554443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=67.14  Aligned_cols=41  Identities=17%  Similarity=0.351  Sum_probs=26.9

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45556 566666666666666666666666666666666664

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=66.40  Aligned_cols=40  Identities=20%  Similarity=0.390  Sum_probs=26.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            45556 56666666666666666666666666666666665

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=67.66  Aligned_cols=41  Identities=27%  Similarity=0.499  Sum_probs=22.2

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            44445 455555555555555555555555555555555554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.26  E-value=8.3e-12  Score=74.52  Aligned_cols=52  Identities=25%  Similarity=0.356  Sum_probs=48.3

Q ss_pred             CCCCCHHHHHHHHHh-h-CCCc--------ccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923          3 SRFKTKYRLKLHLDT-H-GETP--------YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus         3 ~~f~~~~~l~~H~~~-h-~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      +.|.....|..|++. | ++++        |.|..|++.|.+...|..|+++|+++++|.|.
T Consensus        33 k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           33 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            578999999999998 8 6666        99999999999999999999999999999986

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=67.05  Aligned_cols=41  Identities=24%  Similarity=0.356  Sum_probs=23.2

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44455 455555555555555555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=67.41  Aligned_cols=41  Identities=24%  Similarity=0.442  Sum_probs=22.2

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            44445 455555555555555555555555555555555554

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=67.65  Aligned_cols=40  Identities=25%  Similarity=0.410  Sum_probs=20.0

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      +++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            3444 445555555555555555555555555555554443

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.26  E-value=1.7e-13  Score=75.86  Aligned_cols=51  Identities=10%  Similarity=0.371  Sum_probs=30.9

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchh
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSN   93 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   93 (159)
                      .|+++|.++++|.|..|++.|.....|.   +.|.++++|.|..|++.|....+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            3555566666666666666666655554   45666666666666666655544

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.26  E-value=2.3e-12  Score=65.33  Aligned_cols=41  Identities=24%  Similarity=0.423  Sum_probs=36.8

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            56778 789999999999999999999999999999998884

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=67.00  Aligned_cols=41  Identities=27%  Similarity=0.488  Sum_probs=24.6

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45555 556666666666666666666666666666665554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=67.54  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=21.7

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444 455555555555555555555555555555555553

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=67.72  Aligned_cols=42  Identities=31%  Similarity=0.621  Sum_probs=22.5

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=67.54  Aligned_cols=42  Identities=33%  Similarity=0.572  Sum_probs=22.5

Q ss_pred             HhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         43 VVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        43 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      ++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344555555555555555555555555555555555555544

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.9e-12  Score=66.27  Aligned_cols=40  Identities=28%  Similarity=0.522  Sum_probs=21.6

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      |+++| ++++|.|..|++.|.+..+|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            44445 45555555555555555555555555555555554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.7e-12  Score=67.20  Aligned_cols=42  Identities=26%  Similarity=0.578  Sum_probs=21.8

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            344455555555555555555555555555555555555543

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=66.83  Aligned_cols=40  Identities=23%  Similarity=0.409  Sum_probs=19.6

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            34444 44455555555555555555555555544444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.3e-12  Score=67.61  Aligned_cols=41  Identities=24%  Similarity=0.418  Sum_probs=21.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            34444 455555555555555555555555555555555543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.8e-12  Score=67.11  Aligned_cols=41  Identities=24%  Similarity=0.476  Sum_probs=26.2

Q ss_pred             Hhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         16 DTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        16 ~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      ++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345 56666666666666666666666666666666666655

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=67.23  Aligned_cols=42  Identities=26%  Similarity=0.506  Sum_probs=20.8

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444445555555555555555555555555555555443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.5e-12  Score=65.15  Aligned_cols=42  Identities=24%  Similarity=0.422  Sum_probs=37.5

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567888899999999999999999999999999999999874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=66.40  Aligned_cols=43  Identities=26%  Similarity=0.403  Sum_probs=38.6

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      .|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367788 7999999999999999999999999999999999863

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-12  Score=66.31  Aligned_cols=42  Identities=24%  Similarity=0.415  Sum_probs=38.8

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      +++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4567 79999999999999999999999999999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=67.37  Aligned_cols=42  Identities=33%  Similarity=0.606  Sum_probs=23.6

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            444555555555555555555555555555555555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.24  E-value=7.3e-14  Score=77.31  Aligned_cols=53  Identities=11%  Similarity=0.389  Sum_probs=46.7

Q ss_pred             HHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhH
Q psy16923         11 LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDL   66 (159)
Q Consensus        11 l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   66 (159)
                      |..|+++| +++||.|+.|++.|.....|.   +.|.++++|.|..|++.|.....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            45688889 899999999999999988886   889999999999999999876554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.4e-12  Score=66.67  Aligned_cols=44  Identities=27%  Similarity=0.551  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=2.4e-12  Score=66.63  Aligned_cols=44  Identities=32%  Similarity=0.571  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37788999999999999999999999999999999999999864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-12  Score=66.31  Aligned_cols=44  Identities=27%  Similarity=0.491  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37788999999999999999999999999999999999999864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.1e-12  Score=67.91  Aligned_cols=40  Identities=23%  Similarity=0.463  Sum_probs=19.5

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            34444 44455555555555555555555555544444444

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.4e-12  Score=67.59  Aligned_cols=42  Identities=29%  Similarity=0.415  Sum_probs=21.0

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444445555555555555555555555555555555443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-12  Score=65.98  Aligned_cols=40  Identities=25%  Similarity=0.553  Sum_probs=19.9

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      |+++| ++++|.|+.|++.|.+...|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            33444 44555555555555555555555555555444443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3e-12  Score=66.22  Aligned_cols=44  Identities=30%  Similarity=0.549  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=65.90  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=38.1

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      .|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            367788 7899999999999999999999999999999998863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=66.05  Aligned_cols=43  Identities=26%  Similarity=0.455  Sum_probs=38.3

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      .|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367788 7899999999999999999999999999999999864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.8e-12  Score=65.81  Aligned_cols=43  Identities=23%  Similarity=0.369  Sum_probs=38.3

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            467788 7899999999999999999999999999999998864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=66.12  Aligned_cols=43  Identities=37%  Similarity=0.665  Sum_probs=39.3

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6778999999999999999999999999999999999999874

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=66.85  Aligned_cols=42  Identities=31%  Similarity=0.642  Sum_probs=22.3

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344455555555555555555555555555555555555553

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.9e-12  Score=66.25  Aligned_cols=44  Identities=30%  Similarity=0.526  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=65.95  Aligned_cols=44  Identities=32%  Similarity=0.576  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.2e-12  Score=66.11  Aligned_cols=44  Identities=27%  Similarity=0.504  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37788999999999999999999999999999999999999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=6.3e-12  Score=64.71  Aligned_cols=39  Identities=26%  Similarity=0.677  Sum_probs=21.4

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccc
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCG   57 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   57 (159)
                      ++++|.|..|++.|.....|..|+++|.++++|.|+.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            455555555555555555555555555555555555553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=9e-12  Score=65.06  Aligned_cols=42  Identities=36%  Similarity=0.622  Sum_probs=24.9

Q ss_pred             cCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcc
Q psy16923         45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSR   86 (159)
Q Consensus        45 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   86 (159)
                      |.++++|.|..|++.|.+...|..|++.|+++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            344555666666666666666666666666666666666653

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.6e-12  Score=65.95  Aligned_cols=44  Identities=32%  Similarity=0.578  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            37788999999999999999999999999999999999999864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.1e-12  Score=65.73  Aligned_cols=44  Identities=30%  Similarity=0.564  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      +|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.3e-12  Score=66.09  Aligned_cols=44  Identities=30%  Similarity=0.559  Sum_probs=39.5

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36788899999999999999999999999999999999999864

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.3e-12  Score=66.75  Aligned_cols=41  Identities=27%  Similarity=0.446  Sum_probs=28.0

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            55566 566777777777777777777777777666666664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.8e-12  Score=65.80  Aligned_cols=44  Identities=32%  Similarity=0.559  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.22  E-value=2.7e-12  Score=65.05  Aligned_cols=39  Identities=26%  Similarity=0.456  Sum_probs=20.4

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      +++| ++++|.|..|++.|.+..+|..|+++|.++++|.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3344 45555555555555555555555555555555444

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.9e-12  Score=65.82  Aligned_cols=43  Identities=28%  Similarity=0.467  Sum_probs=38.9

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6778899999999999999999999999999999999999863

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=4.8e-12  Score=64.85  Aligned_cols=41  Identities=15%  Similarity=0.179  Sum_probs=27.7

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            44555 566777777777777777777777777776666663

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.6e-12  Score=66.48  Aligned_cols=40  Identities=28%  Similarity=0.448  Sum_probs=20.2

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      +++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3344 445555555555555555555555555555555443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.8e-12  Score=66.33  Aligned_cols=44  Identities=30%  Similarity=0.571  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            37788999999999999999999999999999999999999874

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.1e-12  Score=65.49  Aligned_cols=39  Identities=36%  Similarity=0.675  Sum_probs=18.7

Q ss_pred             HhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         43 VVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        43 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      ++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            344444444444444444444444444444444444443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.4e-12  Score=65.57  Aligned_cols=43  Identities=23%  Similarity=0.415  Sum_probs=38.2

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            467788 7899999999999999999999999999999999863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.1e-12  Score=66.21  Aligned_cols=41  Identities=17%  Similarity=0.351  Sum_probs=20.5

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |+++|.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            34444444555555555555555555555555555555444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4e-12  Score=65.09  Aligned_cols=43  Identities=26%  Similarity=0.515  Sum_probs=38.2

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3678889999999999999999999999999999999999884

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3e-12  Score=66.22  Aligned_cols=41  Identities=34%  Similarity=0.639  Sum_probs=19.5

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.2e-12  Score=65.69  Aligned_cols=44  Identities=32%  Similarity=0.591  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999863

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.5e-12  Score=65.87  Aligned_cols=41  Identities=24%  Similarity=0.420  Sum_probs=22.1

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            34445555555555555555555555555555555555554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=9e-12  Score=64.10  Aligned_cols=42  Identities=26%  Similarity=0.501  Sum_probs=39.9

Q ss_pred             hcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCc
Q psy16923         44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCS   85 (159)
Q Consensus        44 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   85 (159)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            578899999999999999999999999999999999999996

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.1e-12  Score=64.65  Aligned_cols=43  Identities=26%  Similarity=0.427  Sum_probs=38.2

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            3677888999999999999999999999999999999999884

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=65.65  Aligned_cols=44  Identities=27%  Similarity=0.486  Sum_probs=39.4

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.6e-12  Score=64.81  Aligned_cols=43  Identities=30%  Similarity=0.430  Sum_probs=38.0

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3677888899999999999999999999999999999999884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.8e-12  Score=65.75  Aligned_cols=39  Identities=26%  Similarity=0.573  Sum_probs=19.7

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      +++| ++++|.|..|++.|.+...|..|+++|.++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3344 44555555555555555555555555555554443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=5.9e-12  Score=65.79  Aligned_cols=40  Identities=18%  Similarity=0.276  Sum_probs=38.4

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecccccc
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGK   58 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   58 (159)
                      ++++|.|.+|++.|.+...|..|+++|.++++|.|..|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            6899999999999999999999999999999999999985

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-12  Score=64.10  Aligned_cols=41  Identities=32%  Similarity=0.560  Sum_probs=36.2

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67788888999999999999999999999999998888877

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5e-12  Score=65.39  Aligned_cols=43  Identities=26%  Similarity=0.379  Sum_probs=37.8

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            467788 7899999999999999999999999999999998863

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=7.1e-12  Score=64.15  Aligned_cols=42  Identities=19%  Similarity=0.297  Sum_probs=36.8

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      .|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            467788 789999999999999999999999999999988874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.20  E-value=1.9e-12  Score=69.43  Aligned_cols=50  Identities=16%  Similarity=0.248  Sum_probs=35.0

Q ss_pred             ccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCc
Q psy16923         30 MKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus        30 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      +.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45666666667777777777777777777777777777777777776665

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=5.9e-12  Score=64.48  Aligned_cols=42  Identities=21%  Similarity=0.347  Sum_probs=35.9

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            467778 788999999999999999999999999888888874

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.4e-12  Score=66.03  Aligned_cols=43  Identities=35%  Similarity=0.466  Sum_probs=40.0

Q ss_pred             HHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         42 LVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        42 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      +++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678899999999999999999999999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.8e-12  Score=65.15  Aligned_cols=43  Identities=33%  Similarity=0.541  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      +|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4778889999999999999999999999999999999999886

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=5.7e-12  Score=65.18  Aligned_cols=42  Identities=26%  Similarity=0.445  Sum_probs=22.8

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCC-CCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG-KRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|++ +++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34455555555555555555555555555555555 5555553

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=2.7e-12  Score=66.46  Aligned_cols=41  Identities=17%  Similarity=0.288  Sum_probs=38.6

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCC-CCceecc
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRD-TKAYQCV   54 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~   54 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.+ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            67888 79999999999999999999999999999 9999986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=6.2e-12  Score=63.73  Aligned_cols=40  Identities=28%  Similarity=0.560  Sum_probs=33.9

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      |+++| ++++|.|..|++.|.+...|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56677 78889999999999999999999888888888776

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.9e-14  Score=81.17  Aligned_cols=62  Identities=15%  Similarity=0.330  Sum_probs=55.1

Q ss_pred             HHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         36 RTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        36 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      ..|..|++.|.++++|.|..|++.|.+...|..       +++|.|..|++.|.+...|..|++.|+++
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~   65 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGK   65 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCC
Confidence            356779999999999999999999999888776       78899999999999999999999976544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.18  E-value=8.4e-12  Score=63.17  Aligned_cols=41  Identities=24%  Similarity=0.394  Sum_probs=36.1

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56778888999999999999999999999999999988877

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.2e-12  Score=64.51  Aligned_cols=43  Identities=26%  Similarity=0.485  Sum_probs=38.4

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      +|+++| ++++|.|..|++.|.....|..|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            477788 7899999999999999999999999999999999863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8e-12  Score=64.62  Aligned_cols=42  Identities=26%  Similarity=0.552  Sum_probs=37.9

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567888899999999999999999999999999999999886

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.1e-12  Score=64.21  Aligned_cols=40  Identities=23%  Similarity=0.373  Sum_probs=19.9

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      |+++| ++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            34444 44555555555555555555555555555444443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6e-12  Score=64.45  Aligned_cols=41  Identities=34%  Similarity=0.584  Sum_probs=25.2

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            44555666666666666666666666666666666666655

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.7e-12  Score=63.84  Aligned_cols=41  Identities=32%  Similarity=0.567  Sum_probs=35.4

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56778888889999999999999999999888888888876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.1e-11  Score=63.03  Aligned_cols=39  Identities=18%  Similarity=0.239  Sum_probs=25.6

Q ss_pred             Hhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         16 DTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        16 ~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      +.| ++++|.|..|++.|.+...|..|+++|.++++|.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            345 566666666666666666666666666666666664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5e-12  Score=65.41  Aligned_cols=44  Identities=23%  Similarity=0.426  Sum_probs=38.3

Q ss_pred             HHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         40 MHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        40 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      .|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999998863

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.7e-12  Score=66.45  Aligned_cols=41  Identities=27%  Similarity=0.371  Sum_probs=20.2

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |+++|.++++|.|..|++.|.+...|..|++.|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            33444444455555555555555555555544544444444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=62.82  Aligned_cols=42  Identities=26%  Similarity=0.377  Sum_probs=35.7

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.....|..|++.|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            677888888889999999998888899998888888888763

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.8e-12  Score=65.71  Aligned_cols=42  Identities=14%  Similarity=0.211  Sum_probs=38.9

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            477888 799999999999999999999999999999999884

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.8e-11  Score=63.71  Aligned_cols=42  Identities=29%  Similarity=0.536  Sum_probs=22.6

Q ss_pred             HhcCCCCceecc--ccccccCCHHhHHhHHhhcCCCCCcccccC
Q psy16923         43 VVHRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPYTCPWC   84 (159)
Q Consensus        43 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   84 (159)
                      ++|.++++|.|.  .|++.|.+...|..|++.|+++++|+|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344555555554  455555555555555555555555555544

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.1e-11  Score=64.60  Aligned_cols=43  Identities=21%  Similarity=0.375  Sum_probs=39.5

Q ss_pred             HHHhh-CCCcccCC--CCcccCCCHHHHHHHHHhcCCCCceecccc
Q psy16923         14 HLDTH-GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKAYQCVTC   56 (159)
Q Consensus        14 H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   56 (159)
                      |.++| ++++|.|.  .|++.|.....|..|+++|.++++|.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44667 79999998  899999999999999999999999999987

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1e-12  Score=75.39  Aligned_cols=62  Identities=26%  Similarity=0.372  Sum_probs=32.4

Q ss_pred             HHHHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923         11 LKLHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        11 l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      |..|+++| .++++.|..|++.|. ..+|..|+ .|.+++++.|..|++.|.. ..|..|++.|.+
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTT
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccC
Confidence            44455444 455555555555552 55555555 4555555555555555442 555555555443

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.3e-11  Score=63.14  Aligned_cols=42  Identities=29%  Similarity=0.437  Sum_probs=37.1

Q ss_pred             HHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        41 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      |+++|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567788889999999999999999999999999999999884

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.5e-12  Score=64.41  Aligned_cols=39  Identities=33%  Similarity=0.717  Sum_probs=21.0

Q ss_pred             hcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccc
Q psy16923         44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCP   82 (159)
Q Consensus        44 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   82 (159)
                      +|.++++|.|..|++.|.+...|..|++.|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555553

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=3.8e-11  Score=61.11  Aligned_cols=36  Identities=17%  Similarity=0.411  Sum_probs=22.1

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            456666666666666666666666666666666554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.4e-12  Score=64.72  Aligned_cols=42  Identities=26%  Similarity=0.394  Sum_probs=35.2

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      +|+++| ++++|.|..|++.|.+...|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367777 788888888888888888888888888888888875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.4e-11  Score=62.44  Aligned_cols=41  Identities=22%  Similarity=0.477  Sum_probs=36.3

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccc
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVT   55 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   55 (159)
                      .++| ++++|.|..|++.|.+...|..|+++|.++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3457 7899999999999999999999999999999999874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.8e-11  Score=62.53  Aligned_cols=42  Identities=24%  Similarity=0.492  Sum_probs=37.7

Q ss_pred             HHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         42 LVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        42 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      +++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            467888999999999999999999999999999999999863

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.09  E-value=5.5e-11  Score=60.50  Aligned_cols=41  Identities=17%  Similarity=0.242  Sum_probs=36.8

Q ss_pred             HhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         43 VVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        43 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      ++|.++++|.|..|++.|.+...|..|++.|+++++|.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46788899999999999999999999999999999999864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.3e-11  Score=60.19  Aligned_cols=38  Identities=37%  Similarity=0.744  Sum_probs=20.0

Q ss_pred             hcCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        44 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      +|.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            34445555555555555555555555555555555544

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=9.9e-11  Score=58.82  Aligned_cols=37  Identities=19%  Similarity=0.466  Sum_probs=32.7

Q ss_pred             hh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceec
Q psy16923         17 TH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQC   53 (159)
Q Consensus        17 ~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   53 (159)
                      +| ++++|.|..|++.|.....|..|+++|.++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            46 78899999999999999999999999999888877

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-11  Score=70.87  Aligned_cols=65  Identities=20%  Similarity=0.254  Sum_probs=57.1

Q ss_pred             HHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         37 TLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        37 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      .|..|++.|.+.+++.|..|+..| ....|..|. .|.+++++.|+.|++.|. ...|..|++.+..+
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            466788889999999999999999 489999999 899999999999999987 48999999875544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=6.1e-12  Score=74.36  Aligned_cols=57  Identities=25%  Similarity=0.435  Sum_probs=38.8

Q ss_pred             HHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923         15 LDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        15 ~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      .++| ++++|.|..|++.|.+...|..|+++|.++++|.|..|.    ....|..|.+.|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3446 677777777777777777777777777777777776554    33455566666655

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.95  E-value=3.9e-10  Score=55.16  Aligned_cols=34  Identities=24%  Similarity=0.489  Sum_probs=24.1

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      |+++| +++||.|+.|++.|.+...|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45566 67777777777777777777777777654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.92  E-value=6.2e-10  Score=55.20  Aligned_cols=33  Identities=27%  Similarity=0.561  Sum_probs=17.8

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCCCcee
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQ   52 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   52 (159)
                      +++|.|..|++.|.+...|..|+++|.++++|.
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            455555555555555555555555555555443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.5e-10  Score=54.96  Aligned_cols=33  Identities=18%  Similarity=0.519  Sum_probs=20.9

Q ss_pred             hh-CCCcccCCCCcccCCCHHHHHHHHHhcCCCC
Q psy16923         17 TH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        17 ~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      +| ++++|.|..|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            45 5666666666666666666666666666554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.87  E-value=1.8e-09  Score=53.42  Aligned_cols=37  Identities=27%  Similarity=0.565  Sum_probs=30.2

Q ss_pred             cCCCCceeccccccccCCHHhHHhHHhhcCCCCCccc
Q psy16923         45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTC   81 (159)
Q Consensus        45 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   81 (159)
                      |.++++|.|..|++.|.+...|..|++.|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4567888888888888888888888888888888765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=2.6e-09  Score=59.26  Aligned_cols=37  Identities=24%  Similarity=0.489  Sum_probs=25.1

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHH-HhcCCCCceeccc
Q psy16923         19 GETPYGCPH--CPMKLNTRRTLRMHL-VVHRDTKAYQCVT   55 (159)
Q Consensus        19 ~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~   55 (159)
                      +++||.|..  |++.|.+..+|..|+ ++|++++|+.|..
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            567777754  777777777777775 4677777766654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.86  E-value=1e-09  Score=53.64  Aligned_cols=34  Identities=29%  Similarity=0.681  Sum_probs=22.2

Q ss_pred             HHhhcCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        69 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |++.|.++++|.|+.|++.|.+...|..|++.+.
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            5556666666666666666666666666666543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.86  E-value=2.7e-09  Score=50.88  Aligned_cols=32  Identities=22%  Similarity=0.559  Sum_probs=25.0

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCCCcee
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQ   52 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   52 (159)
                      +||.|..|++.|.....|..|+++|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46788888888888888888888888777654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.82  E-value=2.6e-09  Score=51.38  Aligned_cols=31  Identities=26%  Similarity=0.449  Sum_probs=18.8

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      ++++|.|..|++.|.+...|..|++.|.+++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            4556666666666666666666666665543

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.82  E-value=2.6e-09  Score=51.41  Aligned_cols=31  Identities=35%  Similarity=0.637  Sum_probs=17.6

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      ++++|.|..|++.|.+...|..|+++|.+++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            4555555555555555555555555555443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.5e-09  Score=53.05  Aligned_cols=31  Identities=29%  Similarity=0.688  Sum_probs=15.6

Q ss_pred             hcCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         72 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        72 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      .|.++++|.|..|++.|.+...|..|++.|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            3444555555555555555555555555443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.76  E-value=7.7e-09  Score=49.71  Aligned_cols=33  Identities=18%  Similarity=0.442  Sum_probs=18.5

Q ss_pred             cCCCCceeccccccccCCHHhHHhHHhhcCCCC
Q psy16923         45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKR   77 (159)
Q Consensus        45 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   77 (159)
                      |.++++|.|..|++.|.....|..|++.|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            445555555555555555555555555555443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.75  E-value=7.7e-09  Score=49.62  Aligned_cols=32  Identities=28%  Similarity=0.482  Sum_probs=15.7

Q ss_pred             cCCCCceeccccccccCCHHhHHhHHhhcCCC
Q psy16923         45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus        45 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   76 (159)
                      |.++++|.|..|++.|.+...|..|++.|+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            33444555555555555555555555544443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=1.1e-08  Score=56.71  Aligned_cols=39  Identities=23%  Similarity=0.390  Sum_probs=30.0

Q ss_pred             cCCCCceeccc--cccccCCHHhHHhHH-hhcCCCCCccccc
Q psy16923         45 HRDTKAYQCVT--CGKSFRRSKDLKNHH-NLHTGKRPYTCPW   83 (159)
Q Consensus        45 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~   83 (159)
                      ..+++||.|..  |++.|.+...|..|+ +.|++++|+.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            45678888864  888888888888886 5788888887754

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=8.7e-09  Score=49.87  Aligned_cols=30  Identities=20%  Similarity=0.573  Sum_probs=18.4

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++++|.|..|++.|.....|..|+++|.++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            456666666666666666666666665543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.1e-08  Score=49.44  Aligned_cols=30  Identities=30%  Similarity=0.702  Sum_probs=20.0

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++++|.|..|++.|.....|..|+++|.++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            566667777777777666677676666554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=4.9e-09  Score=51.23  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=18.1

Q ss_pred             hh-CCCcccCCCCcccCCCHHHHHHH-HHhcCC
Q psy16923         17 TH-GETPYGCPHCPMKLNTRRTLRMH-LVVHRD   47 (159)
Q Consensus        17 ~h-~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~   47 (159)
                      +| +++||.|..|++.|.....|..| ++.|.+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            34 45666666666666666666666 555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=2.1e-08  Score=48.37  Aligned_cols=30  Identities=23%  Similarity=0.459  Sum_probs=22.9

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++++|.|..|++.|.....|..|+++|.++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            567778888888888887788887777654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=8e-09  Score=50.01  Aligned_cols=29  Identities=28%  Similarity=0.525  Sum_probs=17.0

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      ++++|.|..|++.|.....|..|+++|.+
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            45556666666666666666666555554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=1.2e-09  Score=64.44  Aligned_cols=57  Identities=16%  Similarity=0.268  Sum_probs=45.7

Q ss_pred             HHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         42 LVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        42 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      .++|.++++|.|..|++.|.....|..|++.|+++++|+|..|.    ....|..|.+.+.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~   73 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYAD   73 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccc
Confidence            45688889999999999999999999999999999999987654    4555566666543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.7e-08  Score=49.76  Aligned_cols=30  Identities=27%  Similarity=0.496  Sum_probs=21.0

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHHHhcCCC
Q psy16923         19 GETPYGCPH--CPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        19 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +++||.|..  |++.|.++..|..|+++|+++
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            567777765  777777777777777777653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.65  E-value=1.7e-08  Score=47.93  Aligned_cols=32  Identities=31%  Similarity=0.482  Sum_probs=24.6

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCCCCCcc
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYT   80 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   80 (159)
                      +||.|..|++.|.....|..|++.|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36778888888888888888888888777764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=7.2e-09  Score=50.51  Aligned_cols=29  Identities=21%  Similarity=0.486  Sum_probs=16.8

Q ss_pred             CCCcccCCCCcccCCCH-HHHHHHHHhcCC
Q psy16923         19 GETPYGCPHCPMKLNTR-RTLRMHLVVHRD   47 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~   47 (159)
                      ++++|.|..|++.|.+. ..|..|+++|.+
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            45556666666666665 556666555544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.9e-08  Score=47.94  Aligned_cols=30  Identities=20%  Similarity=0.518  Sum_probs=20.0

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++++|.|..|++.|.....|..|+++|.++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            466677777777777777777776666553

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.3e-08  Score=49.24  Aligned_cols=30  Identities=13%  Similarity=0.272  Sum_probs=16.9

Q ss_pred             cCCCCCccccc--CcccccCchhHHHhHHhhC
Q psy16923         73 HTGKRPYTCPW--CSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        73 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h  102 (159)
                      +++++||+|..  |++.|.+.+.|..|+++|.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            44555566654  6666666666666655543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=1.8e-08  Score=49.36  Aligned_cols=32  Identities=22%  Similarity=0.463  Sum_probs=19.1

Q ss_pred             CCCcccCC--CCcccCCCHHHHHHHHHhcCCCCc
Q psy16923         19 GETPYGCP--HCPMKLNTRRTLRMHLVVHRDTKA   50 (159)
Q Consensus        19 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~   50 (159)
                      ++++|.|.  .|++.|.+...|..|+++|.++++
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            45566666  366666666666666666655554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=3.3e-08  Score=47.74  Aligned_cols=29  Identities=24%  Similarity=0.577  Sum_probs=15.4

Q ss_pred             cCCCCCcccccCcccccCchhHHHhHHhh
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      |.++++|.|..|++.|.....|..|++.|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            44455555555555555555555555543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=3.1e-08  Score=47.84  Aligned_cols=28  Identities=25%  Similarity=0.420  Sum_probs=13.8

Q ss_pred             cCCCCCcccccCcccccCchhHHHhHHh
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      |.++++|.|..|++.|.....|..|++.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            3444455555555555555555555443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=3.7e-08  Score=45.23  Aligned_cols=29  Identities=24%  Similarity=0.472  Sum_probs=20.6

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +++|.|..|++.|.....|..|++.|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            45677777777777777777777777654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.9e-08  Score=49.07  Aligned_cols=26  Identities=15%  Similarity=0.304  Sum_probs=15.5

Q ss_pred             hcCCCCCcccccCcccccCchhHHHh
Q psy16923         72 LHTGKRPYTCPWCSRTFANGSNCRSH   97 (159)
Q Consensus        72 ~h~~~~~~~C~~C~~~f~~~~~l~~H   97 (159)
                      .|++++||.|..|++.|.....|..|
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H   28 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRH   28 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHH
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHH
Confidence            45555566666666666666666666

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.57  E-value=3e-08  Score=51.38  Aligned_cols=30  Identities=27%  Similarity=0.596  Sum_probs=17.0

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHH-hcCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLV-VHRDT   48 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   48 (159)
                      ++++|.|..|++.|.+..+|..|++ +|.++
T Consensus         4 ~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            4 RDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             TTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            4555666666666666666666655 55543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.57  E-value=7.3e-08  Score=43.87  Aligned_cols=28  Identities=18%  Similarity=0.471  Sum_probs=22.3

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++|.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888887764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.5e-08  Score=47.15  Aligned_cols=30  Identities=33%  Similarity=0.607  Sum_probs=17.4

Q ss_pred             cCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.++++|.|..|++.|.....|..|++.|.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            455555666666666666666666655443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=3.5e-08  Score=48.23  Aligned_cols=35  Identities=26%  Similarity=0.573  Sum_probs=22.6

Q ss_pred             cCCCCceecc--ccccccCCHHhHHhHHhhcCCCCCc
Q psy16923         45 HRDTKAYQCV--TCGKSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus        45 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      |.++++|.|.  .|++.|.+...|..|++.|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3456666676  3777776666677776666666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.56  E-value=2.4e-08  Score=48.56  Aligned_cols=24  Identities=21%  Similarity=0.469  Sum_probs=14.0

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHH
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHL   42 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~   42 (159)
                      +++||.|..|++.|.++.+|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            355566666666666666555555

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=2.4e-08  Score=48.54  Aligned_cols=31  Identities=23%  Similarity=0.483  Sum_probs=19.3

Q ss_pred             hcCCCCCcccccCcccccCc-hhHHHhHHhhC
Q psy16923         72 LHTGKRPYTCPWCSRTFANG-SNCRSHKRRMH  102 (159)
Q Consensus        72 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~h  102 (159)
                      .|.++++|.|..|++.|.+. ..|..|++.|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            45566666666666666666 66666666543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.52  E-value=5e-08  Score=44.18  Aligned_cols=27  Identities=26%  Similarity=0.684  Sum_probs=19.0

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      +++|.|..|++.|.....|..|+++|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            456777777777777777777776664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=6.8e-08  Score=46.49  Aligned_cols=30  Identities=20%  Similarity=0.413  Sum_probs=17.8

Q ss_pred             cCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.++++|.|..|++.|.+...|..|++.|.
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            455556666666666666666666665544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.52  E-value=5.9e-08  Score=43.61  Aligned_cols=26  Identities=31%  Similarity=0.746  Sum_probs=19.2

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhc
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      ++||.|..|++.|.....|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            46777777777777777777777765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.51  E-value=2.7e-09  Score=50.46  Aligned_cols=29  Identities=24%  Similarity=0.537  Sum_probs=15.6

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCCCc
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDTKA   50 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   50 (159)
                      ||.|..|++.|.+...|..|+++|.++++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            45555555555555555555555555444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=9.7e-08  Score=46.00  Aligned_cols=30  Identities=20%  Similarity=0.513  Sum_probs=16.1

Q ss_pred             cCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.++++|.|..|++.|.....|..|++.|.
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            344555555555555555555555555443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.49  E-value=8.1e-08  Score=49.70  Aligned_cols=30  Identities=20%  Similarity=0.518  Sum_probs=20.1

Q ss_pred             cCCCCCcccccCcccccCchhHHHhHH-hhC
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKR-RMH  102 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h  102 (159)
                      |+++++|.|.+|++.|.....|..|++ .|.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            556667777777777777777777766 443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.49  E-value=4.5e-08  Score=44.65  Aligned_cols=28  Identities=25%  Similarity=0.827  Sum_probs=17.9

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566666666666666666666666543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.49  E-value=9.6e-08  Score=43.73  Aligned_cols=29  Identities=17%  Similarity=0.521  Sum_probs=22.1

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      ++|.|..|++.|.....|..|++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            46788888888888888888887777654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.48  E-value=1.5e-07  Score=43.73  Aligned_cols=28  Identities=21%  Similarity=0.510  Sum_probs=21.4

Q ss_pred             CcccCC--CCcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCP--HCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +||.|.  .|++.|.+...|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            467786  7888888888888888777764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.48  E-value=1.1e-07  Score=44.44  Aligned_cols=29  Identities=24%  Similarity=0.559  Sum_probs=21.7

Q ss_pred             CCcccCC--CCcccCCCHHHHHHHHHhcCCC
Q psy16923         20 ETPYGCP--HCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        20 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++||.|.  .|++.|.+...|..|+++|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4677777  6888887777788887777654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.48  E-value=4.8e-08  Score=44.01  Aligned_cols=26  Identities=27%  Similarity=0.666  Sum_probs=17.0

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhc
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      ++||.|..|++.|.....|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35666666666666666666666655

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.46  E-value=7.7e-08  Score=43.75  Aligned_cols=28  Identities=29%  Similarity=0.627  Sum_probs=19.9

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++|.|..|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4677777777777777777777777654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=1.9e-07  Score=51.70  Aligned_cols=31  Identities=23%  Similarity=0.269  Sum_probs=24.1

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCCCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      +++||.|..|++.|.+...|..|+++|++..
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            5778888888888888888888888887653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=7.9e-08  Score=43.67  Aligned_cols=28  Identities=36%  Similarity=0.691  Sum_probs=21.3

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677888888888888888887777654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.44  E-value=9.8e-08  Score=46.34  Aligned_cols=25  Identities=24%  Similarity=0.683  Sum_probs=13.9

Q ss_pred             CCCCceeccccccccCCHHhHHhHH
Q psy16923         46 RDTKAYQCVTCGKSFRRSKDLKNHH   70 (159)
Q Consensus        46 ~~~~~~~C~~C~~~f~~~~~l~~H~   70 (159)
                      .+++||.|..|++.|.+.+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455555555555555555555555

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.44  E-value=1e-07  Score=46.31  Aligned_cols=30  Identities=23%  Similarity=0.305  Sum_probs=19.1

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHHHhcCCC
Q psy16923         19 GETPYGCPH--CPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        19 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++++|.|..  |++.|.+...|..|+++|.++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            466666663  666666666666666666553

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=1e-08  Score=52.93  Aligned_cols=29  Identities=21%  Similarity=0.571  Sum_probs=15.7

Q ss_pred             CCCcccCC--CCcccCCCHHHHHHHHHhcCC
Q psy16923         19 GETPYGCP--HCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        19 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      ++++|.|.  .|++.|.+...|..|+++|.+
T Consensus        15 ~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           15 PDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             TTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            45555553  455555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.42  E-value=1.7e-07  Score=41.90  Aligned_cols=26  Identities=27%  Similarity=0.600  Sum_probs=18.2

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      ||.|..|++.|.+...|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777777654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=2.9e-08  Score=45.66  Aligned_cols=29  Identities=28%  Similarity=0.634  Sum_probs=20.8

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      ++||.|..|++.|.....|..|+++|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            35677777777777777777777776653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=3.1e-08  Score=45.33  Aligned_cols=28  Identities=21%  Similarity=0.440  Sum_probs=20.0

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +||.|..|++.|....+|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4677777777777777777777777653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.39  E-value=2e-08  Score=47.34  Aligned_cols=30  Identities=30%  Similarity=0.448  Sum_probs=21.0

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCCCCCc
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      ||.|..|++.|.....|..|++.|+++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            566777777777777777777777766654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=3.9e-07  Score=50.45  Aligned_cols=32  Identities=16%  Similarity=0.370  Sum_probs=25.6

Q ss_pred             cCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      +.+++||.|..|++.|.+...|..|+++|.++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            56678888888888888888888888877654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=3.9e-07  Score=41.58  Aligned_cols=27  Identities=37%  Similarity=0.699  Sum_probs=14.6

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCC
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      ++|.|..|++.|.....|..|++.|++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            345555555555555555555555544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.35  E-value=2.5e-07  Score=44.87  Aligned_cols=29  Identities=24%  Similarity=0.478  Sum_probs=14.4

Q ss_pred             cCCCCCccccc--CcccccCchhHHHhHHhh
Q psy16923         73 HTGKRPYTCPW--CSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        73 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  101 (159)
                      |+++++|.|.+  |++.|.+.+.|..|++.|
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   33 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWH   33 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            34445555542  555555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.34  E-value=2.4e-07  Score=42.45  Aligned_cols=28  Identities=25%  Similarity=0.509  Sum_probs=19.4

Q ss_pred             CcccCCCCcccCCCHHHHHHH-HHhcCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMH-LVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   48 (159)
                      ++|.|..|++.|.+...|..| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            467777777777777777777 5666654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=9.7e-08  Score=49.14  Aligned_cols=36  Identities=22%  Similarity=0.384  Sum_probs=25.3

Q ss_pred             hHHhhcCCCCCcccc--cCcccccCchhHHHhHHhhCC
Q psy16923         68 NHHNLHTGKRPYTCP--WCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        68 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      .|...|.++++|.|.  .|++.|.+.+.|..|++.|.+
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            344557777778885  588888877778888776543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.66  E-value=7.1e-08  Score=42.91  Aligned_cols=25  Identities=28%  Similarity=0.619  Sum_probs=18.5

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhc
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      +||.|..|++.|.+...|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4677777777777777777777765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.30  E-value=4e-07  Score=41.30  Aligned_cols=24  Identities=21%  Similarity=0.520  Sum_probs=12.4

Q ss_pred             CcccccCcccccCchhHHHhHHhh
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      ||.|..|++.|.....|..|++.|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLH   25 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGG
T ss_pred             CccCCCCCchhCCHHHHHHHHHHh
Confidence            445555555555555555555543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=3.6e-07  Score=40.87  Aligned_cols=24  Identities=25%  Similarity=0.614  Sum_probs=13.9

Q ss_pred             CCcccccCcccccCchhHHHhHHh
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      ++|.|..|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            455566666666666666665554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.29  E-value=5.1e-07  Score=40.89  Aligned_cols=25  Identities=28%  Similarity=0.668  Sum_probs=13.3

Q ss_pred             CcccccCcccccCchhHHHhHHhhC
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      +|.|..|++.|.....|..|++.|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhc
Confidence            4555555555555555555555443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=7.6e-07  Score=40.03  Aligned_cols=24  Identities=33%  Similarity=0.797  Sum_probs=12.1

Q ss_pred             CCcccccCcccccCchhHHHhHHh
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      ++|.|..|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHh
Confidence            345555555555555555555443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.25  E-value=6.6e-07  Score=40.76  Aligned_cols=27  Identities=30%  Similarity=0.680  Sum_probs=17.4

Q ss_pred             CcccccCcccccCchhHHHhHHhhCCc
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      +|.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            466666666666666666666665543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.24  E-value=5.2e-07  Score=40.82  Aligned_cols=26  Identities=42%  Similarity=0.915  Sum_probs=12.7

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCC
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      +|.|..|++.|.....|..|++.|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            34455555555555555555444443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=7.2e-07  Score=39.91  Aligned_cols=24  Identities=29%  Similarity=0.703  Sum_probs=12.8

Q ss_pred             CCcccccCcccccCchhHHHhHHh
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      +||.|..|++.|...+.|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            345555555555555555555543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.22  E-value=1e-06  Score=40.72  Aligned_cols=26  Identities=46%  Similarity=1.005  Sum_probs=13.2

Q ss_pred             ceecc--ccccccCCHHhHHhHHhhcCC
Q psy16923         50 AYQCV--TCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        50 ~~~C~--~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      ||.|.  .|++.|.....|..|++.|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            34454  455555555555555555544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.21  E-value=1e-06  Score=40.96  Aligned_cols=26  Identities=31%  Similarity=0.782  Sum_probs=13.9

Q ss_pred             CCcccc--cCcccccCchhHHHhHHhhC
Q psy16923         77 RPYTCP--WCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        77 ~~~~C~--~C~~~f~~~~~l~~H~~~~h  102 (159)
                      ++|.|.  .|++.|.+...|..|++.|.
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            345555  45555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=7e-07  Score=40.32  Aligned_cols=25  Identities=24%  Similarity=0.558  Sum_probs=16.3

Q ss_pred             CcccccCcccccCchhHHHhHHhhC
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      +|.|..|++.|.....|..|++.|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhc
Confidence            5666666666666666666666554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.18  E-value=1.2e-06  Score=38.95  Aligned_cols=23  Identities=35%  Similarity=0.736  Sum_probs=12.5

Q ss_pred             cccccCcccccCchhHHHhHHhh
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      |.|..|++.|.+...|..|++.|
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHc
Confidence            45555555555555555555543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.6e-07  Score=42.02  Aligned_cols=24  Identities=29%  Similarity=0.685  Sum_probs=13.7

Q ss_pred             CcccccCcccccCchhHHHhHHhh
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      ||.|..|++.|.....|..|++.|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            455555666665555555555544

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.7e-07  Score=40.91  Aligned_cols=24  Identities=33%  Similarity=0.791  Sum_probs=15.7

Q ss_pred             CcccccCcccccCchhHHHhHHhh
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      ||.|..|++.|.+...|..|++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            566666766666666666666543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.14  E-value=1e-06  Score=39.78  Aligned_cols=25  Identities=36%  Similarity=0.688  Sum_probs=16.4

Q ss_pred             cccCC--CCcccCCCHHHHHHHHHhcC
Q psy16923         22 PYGCP--HCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        22 ~~~C~--~C~~~f~~~~~l~~H~~~h~   46 (159)
                      +|.|.  .|++.|.....|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  66666666666666666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.41  E-value=3.3e-07  Score=41.90  Aligned_cols=26  Identities=35%  Similarity=0.737  Sum_probs=14.5

Q ss_pred             CCcccccCcccccCchhHHHhHHhhC
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      ++|.|..|++.|.....|..|++.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            34555556655555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.08  E-value=2e-06  Score=39.18  Aligned_cols=20  Identities=30%  Similarity=0.698  Sum_probs=12.3

Q ss_pred             CcccccCcccccCchhHHHh
Q psy16923         78 PYTCPWCSRTFANGSNCRSH   97 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H   97 (159)
                      +|.|..|++.|.+...|..|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHH
T ss_pred             CcCCcccCcccCChHHHHHH
Confidence            45666666666666666666

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.05  E-value=7.7e-06  Score=44.91  Aligned_cols=44  Identities=25%  Similarity=0.415  Sum_probs=23.3

Q ss_pred             CcccCCCHHHHHHHHH-hcCCCC------ceecc--ccccccCCHHhHHhHHh
Q psy16923         28 CPMKLNTRRTLRMHLV-VHRDTK------AYQCV--TCGKSFRRSKDLKNHHN   71 (159)
Q Consensus        28 C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~   71 (159)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            6666666666666663 455443      34443  24444444444444444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.04  E-value=1.5e-05  Score=43.76  Aligned_cols=49  Identities=22%  Similarity=0.299  Sum_probs=41.0

Q ss_pred             cccccccCCHHhHHhHHh-hcCCCC------Ccccc--cCcccccCchhHHHhHHhhC
Q psy16923         54 VTCGKSFRRSKDLKNHHN-LHTGKR------PYTCP--WCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        54 ~~C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  102 (159)
                      ..|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            349999999999999984 687665      79997  49999888899999998765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.90  E-value=8.9e-06  Score=36.50  Aligned_cols=24  Identities=29%  Similarity=0.642  Sum_probs=12.5

Q ss_pred             Ccccc--cCcccccCchhHHHhHHhh
Q psy16923         78 PYTCP--WCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        78 ~~~C~--~C~~~f~~~~~l~~H~~~~  101 (159)
                      +|.|.  .|++.|.....|..|++.|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            34555  5555555555555555443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.31  E-value=3.9e-05  Score=48.00  Aligned_cols=76  Identities=21%  Similarity=0.346  Sum_probs=51.3

Q ss_pred             CCcccCCCCcccCCCHHHHHHHH--HhcCCC-Cceecccc------ccccCCHHhHHhHHhhcCCCCCcccccCcccccC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHL--VVHRDT-KAYQCVTC------GKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFAN   90 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   90 (159)
                      .+++.|..|+..|.+...+..|.  +.|... +.+.+..+      +..+...    .+...+.+...|.|.+|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCC
Confidence            57789999999999999999998  445422 22222110      1111111    12223556677999999999999


Q ss_pred             chhHHHhHH
Q psy16923         91 GSNCRSHKR   99 (159)
Q Consensus        91 ~~~l~~H~~   99 (159)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999975

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.97  E-value=0.00027  Score=43.69  Aligned_cols=30  Identities=27%  Similarity=0.419  Sum_probs=25.7

Q ss_pred             hcCCCCCcccccCcccccCchhHHHhHHhh
Q psy16923         72 LHTGKRPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        72 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      .|+|.++|.|..|++.|.+...|..|++..
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            477888999999999999999999998743

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.75  E-value=0.0015  Score=32.84  Aligned_cols=23  Identities=26%  Similarity=0.574  Sum_probs=20.3

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      .+|.|+.|+..|.....|..||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            57889999999999999999987

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.64  E-value=0.00053  Score=42.36  Aligned_cols=30  Identities=23%  Similarity=0.399  Sum_probs=26.0

Q ss_pred             HhcCCCCceeccccccccCCHHhHHhHHhh
Q psy16923         43 VVHRDTKAYQCVTCGKSFRRSKDLKNHHNL   72 (159)
Q Consensus        43 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   72 (159)
                      ..|+|.++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            346788899999999999999999999875

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.28  E-value=0.0033  Score=41.01  Aligned_cols=81  Identities=19%  Similarity=0.336  Sum_probs=57.3

Q ss_pred             CCcccC--CCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHh
Q psy16923         20 ETPYGC--PHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH   97 (159)
Q Consensus        20 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   97 (159)
                      +....|  .-|+..... ..+..|... =...+..|+.|+..+ ....|..|.......+...|..|+..+.. ..|..|
T Consensus        80 ~l~v~C~n~GC~~~~~~-~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H  155 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKMEL-RHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIH  155 (170)
T ss_dssp             TSEEECCSTTCCCEEEG-GGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHH
T ss_pred             hcccCCCCCCCCceecH-hHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhH
Confidence            445667  357766553 457788642 334677899999877 55788999987777888899999987755 477899


Q ss_pred             HHhhCCc
Q psy16923         98 KRRMHPE  104 (159)
Q Consensus        98 ~~~~h~~  104 (159)
                      .+...++
T Consensus       156 ~~~~~~~  162 (170)
T 3hcs_A          156 DQNCPLA  162 (170)
T ss_dssp             HTTCCC-
T ss_pred             HHhCcCh
Confidence            8765443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.48  E-value=0.0085  Score=30.07  Aligned_cols=23  Identities=26%  Similarity=0.478  Sum_probs=13.6

Q ss_pred             CcccccCcccccCchhHHHhHHh
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      .|.|+.|+..|.....|+.||+.
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhh
Confidence            35566666666666666666653

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.31  E-value=0.011  Score=27.72  Aligned_cols=27  Identities=19%  Similarity=0.555  Sum_probs=18.9

Q ss_pred             CcccccCcccccCchhHHHhHHhhCCc
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      .|.|++|.+.|.+...|..|.+..|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            367777777777777777777766644

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.09  E-value=0.024  Score=36.91  Aligned_cols=70  Identities=20%  Similarity=0.394  Sum_probs=44.0

Q ss_pred             cCCCCcccCCCH-----HHHHHHHHhcCCCCceec--cccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHH
Q psy16923         24 GCPHCPMKLNTR-----RTLRMHLVVHRDTKAYQC--VTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS   96 (159)
Q Consensus        24 ~C~~C~~~f~~~-----~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   96 (159)
                      .|+.|+..+...     ..+.+-+.    .....|  ..|+.... ...+..|.. .-.-++..|+.|+..+ .+..|..
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~----~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~  127 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL----SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINI  127 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH----TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh----hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHH
Confidence            899998876643     12222222    234567  45776554 467778874 3344567899998877 5567888


Q ss_pred             hHHh
Q psy16923         97 HKRR  100 (159)
Q Consensus        97 H~~~  100 (159)
                      |...
T Consensus       128 H~~~  131 (170)
T 3hcs_A          128 HILK  131 (170)
T ss_dssp             HHHH
T ss_pred             Hhhh
Confidence            8863

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=93.81  E-value=0.012  Score=32.98  Aligned_cols=38  Identities=24%  Similarity=0.683  Sum_probs=17.9

Q ss_pred             ccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccC
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFR   61 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   61 (159)
                      |.|..|+..++... +..|...-.+...+.|..|+..|.
T Consensus        11 F~C~~Cgd~lKK~k-v~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVKKIQ-VEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEETTH-HHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeeeccc-chhHHhhCCCCCcEEecccCCeeC
Confidence            45555554443332 555544333333455555555554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.33  E-value=0.068  Score=24.97  Aligned_cols=23  Identities=26%  Similarity=0.516  Sum_probs=17.7

Q ss_pred             cccCCCCcccCCCHHHHHHHHHh
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      .|.|+.|.+.|.+...|..|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHh
Confidence            47788888888888888888664

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.52  E-value=0.059  Score=30.22  Aligned_cols=31  Identities=32%  Similarity=0.522  Sum_probs=24.8

Q ss_pred             CcccccCccccc-------CchhHHHhHHhhCCchhhh
Q psy16923         78 PYTCPWCSRTFA-------NGSNCRSHKRRMHPEELKL  108 (159)
Q Consensus        78 ~~~C~~C~~~f~-------~~~~l~~H~~~~h~~~~~~  108 (159)
                      --.|.+|++.+.       ..+.|.+|++..|.++++.
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~   65 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEK   65 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHHh
Confidence            468888988876       3568999999999887654

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=89.86  E-value=0.21  Score=22.70  Aligned_cols=25  Identities=24%  Similarity=0.596  Sum_probs=19.2

Q ss_pred             cccccCcccccCchhHHHhHHhhCC
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      -.|..|.+.+..-.+|..|.+..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3578888888888888888876653

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=88.90  E-value=0.25  Score=24.66  Aligned_cols=12  Identities=42%  Similarity=1.007  Sum_probs=6.9

Q ss_pred             eeccccccccCC
Q psy16923         51 YQCVTCGKSFRR   62 (159)
Q Consensus        51 ~~C~~C~~~f~~   62 (159)
                      |.|..||+.|..
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            556666666655

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=88.11  E-value=0.38  Score=27.55  Aligned_cols=27  Identities=19%  Similarity=0.343  Sum_probs=17.8

Q ss_pred             cccccCcccccCchhHHHhHHhhCCchhhh
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMHPEELKL  108 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  108 (159)
                      ..|-+||+.|.   .|.+|+..+|+-....
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltpee   48 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTPEE   48 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCHHH
Confidence            57777888776   3667887766554433

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=87.92  E-value=0.26  Score=29.25  Aligned_cols=11  Identities=45%  Similarity=0.945  Sum_probs=6.2

Q ss_pred             ceecccccccc
Q psy16923         50 AYQCVTCGKSF   60 (159)
Q Consensus        50 ~~~C~~C~~~f   60 (159)
                      ++.|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            45555555555

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=87.81  E-value=0.75  Score=21.55  Aligned_cols=23  Identities=22%  Similarity=0.353  Sum_probs=14.3

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      ..+.|..|+-.|.....+..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            34566666666666666666644

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=87.25  E-value=0.19  Score=27.78  Aligned_cols=39  Identities=36%  Similarity=0.715  Sum_probs=16.3

Q ss_pred             CcccC-CCCcccCCCHHHHHHHHHhcCCCCceecccccccc
Q psy16923         21 TPYGC-PHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSF   60 (159)
Q Consensus        21 ~~~~C-~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   60 (159)
                      .+-.| ..|+..+.+.. |..|+...-..+...|..|+..+
T Consensus        15 ~~v~C~~~C~~~v~r~~-l~~H~~~~C~~r~v~C~~C~~~~   54 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSRRD-LPAHLQHDCPKRRLKCEFCGCDF   54 (76)
T ss_dssp             SCCBCTTCCSCBCCSSS-STTTTTTSCTTSCCCCSSSCCCC
T ss_pred             cccCCCccccHHhhHhH-HHhhCHhhCCCcceECCCCCCcc
Confidence            34445 24554444322 44443322223344455555444

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=86.74  E-value=0.072  Score=29.91  Aligned_cols=13  Identities=31%  Similarity=0.956  Sum_probs=10.2

Q ss_pred             CcccccCcccccC
Q psy16923         78 PYTCPWCSRTFAN   90 (159)
Q Consensus        78 ~~~C~~C~~~f~~   90 (159)
                      .|+|+.||..|--
T Consensus        51 ~FkCP~CgEEFyG   63 (95)
T 2k5c_A           51 VFKCPVCGEEFYG   63 (95)
T ss_dssp             EEECTTTCCEEET
T ss_pred             hhcCCCccHHHhc
Confidence            4899999987743

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=86.53  E-value=0.27  Score=33.02  Aligned_cols=25  Identities=36%  Similarity=0.731  Sum_probs=18.3

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCCCCCcccccCcc
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSR   86 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   86 (159)
                      ..|.|..||..+.             |..|+.|+.|+.
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             cEEEECCCCCEEc-------------CcCCCCCCCCCC
Confidence            4588999987754             145788988875

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.03  E-value=0.59  Score=26.18  Aligned_cols=49  Identities=20%  Similarity=0.484  Sum_probs=36.7

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHH
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      -.|.|..|+..+. +..+..|...-.+...+.|--|+..|.. ...+.|..
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            4589999998765 4678889776655556999999999985 44566654

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=84.82  E-value=0.68  Score=20.47  Aligned_cols=21  Identities=29%  Similarity=0.812  Sum_probs=14.1

Q ss_pred             ccCCCCcccCCCHHHHHHHHH
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      |.|+.|....+....|..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            567777777777776666643

>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6

Probab=84.63  E-value=0.57  Score=25.93  Aligned_cols=35  Identities=34%  Similarity=0.488  Sum_probs=26.1

Q ss_pred             CcccccCccccc---CchhHHHhHHhhCCchhhhhhhc
Q psy16923         78 PYTCPWCSRTFA---NGSNCRSHKRRMHPEELKLYESS  112 (159)
Q Consensus        78 ~~~C~~C~~~f~---~~~~l~~H~~~~h~~~~~~~~~~  112 (159)
                      ...|..|++.+.   ...+|.+|++.+|+++.......
T Consensus        29 ~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~~~~~   66 (73)
T 2ct5_A           29 KIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFVKS   66 (73)
T ss_dssp             CCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHHHCCC
T ss_pred             EEECCCCCccccCCCChHhHHHHHHHHCHHHHHHHHHc
Confidence            457889987754   47789999999998876554433

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=82.72  E-value=0.46  Score=23.76  Aligned_cols=12  Identities=33%  Similarity=1.005  Sum_probs=7.3

Q ss_pred             ceeccccccccC
Q psy16923         50 AYQCVTCGKSFR   61 (159)
Q Consensus        50 ~~~C~~C~~~f~   61 (159)
                      .|.|..||..+.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            356666666554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=81.77  E-value=0.82  Score=28.15  Aligned_cols=22  Identities=18%  Similarity=0.344  Sum_probs=13.7

Q ss_pred             ceeccccccccCCHHhHHhHHh
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHN   71 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~   71 (159)
                      .|.|..|+..|.+...+..|..
T Consensus        93 ~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           93 SKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTEETTTTEECSSHHHHHHHHT
T ss_pred             CeEcCCCCCEeCCHHHHHHHHC
Confidence            3456666666666666666654

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=81.27  E-value=1.2  Score=29.84  Aligned_cols=26  Identities=19%  Similarity=0.345  Sum_probs=15.8

Q ss_pred             CCcccCCCCcccCCC-HHHHHHHHHhc
Q psy16923         20 ETPYGCPHCPMKLNT-RRTLRMHLVVH   45 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~-~~~l~~H~~~h   45 (159)
                      ..+..|..|+..|.+ ...|..|+..|
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            345666666666665 56666666544

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=80.95  E-value=1.5  Score=28.71  Aligned_cols=39  Identities=23%  Similarity=0.356  Sum_probs=27.3

Q ss_pred             HhHHhHHhhcCCC-------CCcccccCcccccCchhHHHhHHhhCC
Q psy16923         64 KDLKNHHNLHTGK-------RPYTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        64 ~~l~~H~~~h~~~-------~~~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      ..|..|++.....       .-|+|..||+ +..-.+|..|++.|..
T Consensus       133 grlieHlK~~~~~GqDyvFWQFYKCe~CgK-YvDId~~~~Hlk~Hg~  178 (226)
T 2czr_A          133 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHGI  178 (226)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTTC
T ss_pred             HHHHHHHHhccccCcceEEEEEEehhhcCc-eecHHHHHHHHHHcCc
Confidence            5788888764321       1279999998 4566788999996553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	159
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.003
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.004

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 2e-07
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 73  HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL 106
           H+G++PY C  C   F      + H  + H E +
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 5e-07
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 50 AYQC--VTCGKSFRRSKDLKNHHNLHTGKRPYTCPW 83
          ++ C    CGKSF   K LK H  LH+  R Y C +
Sbjct: 1  SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 8e-07
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHH-NLHTGKRPYTC 81
          K Y C +CGK F R   L  H   +HT +RP+ C
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 74  TGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE 105
           +  +PY C  C + F+   +   H +++H  E
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE 32

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 1e-05
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
          K Y C  CGKSF        H ++H G RPY C  C + F    +   H +
Sbjct: 2  KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 3e-04
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLH 73
          +  Y C  C      +     H+ +H   + Y C  CGK F+    L  H  +H
Sbjct: 1  DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 2e-05
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG 75
          +H   K Y CV CGK+F RS  L  H  +HTG
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 73 HTGKRPYTCPWCSRTFANGSNCRSHKR 99
          H+G++PY C  C + F+  S    H+R
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQR 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.1 bits (84), Expect = 6e-05
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          +++ C  C ++F R + LK H+  HT ++
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (84), Expect = 8e-05
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTG 75
          K +QC  C ++F RS  L  H   HTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKR 77
          K + C  C K F RS  L  H   H  K+
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 73  HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 104
           HTG++PY C  C +TF        H +R H  
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 7e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 44 VHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTGK 76
           H   K Y C  C K+FR+ + L  H   +   
Sbjct: 2  THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
                 +R Y C  C ++F++ S+   H+R
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.001
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 41 HLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG 75
               R+ + Y+C  CGKSF  S DL  H   HTG
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (76), Expect = 0.001
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 49 KAYQCVTCGKSFRRSKDLKNHHNLHT 74
          K Y+C+ CGK+F ++  L NH  +HT
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 49 KAYQC--VTCGKSFRRSKDLKNHHNLHTG 75
          + Y C   +C + F RS DL  H  +HTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 49 KAYQC--VTCGKSFRRSKDLKNHHNLHTG 75
          K ++C    C KS+ R ++LK H   HTG
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.001
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 99
               TG +P+ CP C R+F+   +   H++
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 49 KAYQC--VTCGKSFRRSKDLKNHHNLHTGKR 77
          + + C    CGK F RS +L+ H   HTG++
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 49 KAYQC--VTCGKSFRRSKDLKNHHNLHTGK 76
          + Y C    C K+F R+ DL  H   H  K
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.6 bits (72), Expect = 0.003
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 49 KAYQC--VTCGKSFRRSKDLKNHHNLHTG 75
          K +QC    CGK F    +L+ H  +HTG
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.6 bits (72), Expect = 0.004
 Identities = 6/31 (19%), Positives = 11/31 (35%)

Query: 45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG 75
              + + C  C  +F    +   H  +HT 
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	159
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.73
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.7
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.27
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.27
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.27
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.25
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.24
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.24
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.23
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.21
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.19
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.16
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.15
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.12
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.07
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.03
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.01
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.01
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.0
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.99
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.96
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.96
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.88
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.87
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.86
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.84
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.75
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.74
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.72
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.68
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.66
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.6
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.56
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.47
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.46
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.25
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.19
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.16
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.98
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.95
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.95
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.89
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.89
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.86
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.84
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.8
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.79
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.77
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.75
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.7
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.65
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.64
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.63
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.63
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.6
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.53
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.47
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.46
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.45
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.36
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.35
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.26
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.21
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.11
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.07
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.06
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.06
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.03
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.03
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.97
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.91
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.8
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.76
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.74
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.63
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.53
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.5
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.45
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.42
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.33
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.57
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.54
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.49
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.38
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.26
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.24
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.02
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.18
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.71
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.7
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.28
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.95
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.63
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.47
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.31
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.9
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.46
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.44
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.21
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.11
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.02
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.78
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.29
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	86.72
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.31
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	86.27
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.89
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	83.91
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	81.98
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.96

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.9e-18  Score=91.57  Aligned_cols=53  Identities=26%  Similarity=0.667  Sum_probs=35.1

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCCCceeccccccccCCHHhHHhHHhhc
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDTKAYQCVTCGKSFRRSKDLKNHHNLH   73 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   73 (159)
                      |+||.| .||+.|....+|..|+++|++++||.|..|++.|.....|..|++.|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            466666 36666666666666666666666666666666666666666666654

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=6.7e-18  Score=89.39  Aligned_cols=53  Identities=34%  Similarity=0.715  Sum_probs=50.4

Q ss_pred             CCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcccccCchhHHHhHHhh
Q psy16923         48 TKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        48 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      +++|.|+ ||+.|.....|..|++.|++++||.|.+|++.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5799995 9999999999999999999999999999999999999999999864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=4.5e-14  Score=68.59  Aligned_cols=36  Identities=17%  Similarity=0.261  Sum_probs=25.8

Q ss_pred             HHHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         13 LHLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        13 ~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +|+++| +++||.|.+|++.|...++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            356667 677777777777777777777777777664

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.3e-13  Score=66.88  Aligned_cols=35  Identities=26%  Similarity=0.569  Sum_probs=22.6

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH-hcCCCCceecc
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLV-VHRDTKAYQCV   54 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~   54 (159)
                      ++||.|.+|++.|.+..+|..|++ +|++++||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            466666666666666666666654 46666666665

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.3e-12  Score=63.23  Aligned_cols=37  Identities=41%  Similarity=0.829  Sum_probs=33.7

Q ss_pred             CCCceeccccccccCCHHhHHhHHh-hcCCCCCccccc
Q psy16923         47 DTKAYQCVTCGKSFRRSKDLKNHHN-LHTGKRPYTCPW   83 (159)
Q Consensus        47 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   83 (159)
                      .++||.|..|++.|.....|..|++ .|++++||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4689999999999999999999986 699999999974

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=8.9e-13  Score=62.94  Aligned_cols=35  Identities=29%  Similarity=0.684  Sum_probs=27.8

Q ss_pred             hhcCCCCCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         71 NLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        71 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      |+|+|++||+|++|++.|.+.++|..|++.+|+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            46888888888888888888888888887777654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=8.6e-13  Score=63.54  Aligned_cols=33  Identities=24%  Similarity=0.544  Sum_probs=21.5

Q ss_pred             HHHhh-CCCcccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         14 HLDTH-GETPYGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        14 H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      |.|+| +|+||.|.+|++.|.++.+|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            44566 6666666666666666666666666664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=6.8e-13  Score=64.32  Aligned_cols=34  Identities=24%  Similarity=0.553  Sum_probs=19.1

Q ss_pred             HHhhcCCCCCcccccCcccccCchhHHHhHHhhC
Q psy16923         69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        69 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |++.|++++||+|..||+.|...++|..|+++|.
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            4555555555555555555555555555555443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.7e-12  Score=60.51  Aligned_cols=29  Identities=38%  Similarity=0.746  Sum_probs=18.1

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      +++||.|.+|++.|.+.++|..|+++|+|
T Consensus         4 gekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           4 GEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            56666666666666666666666666654

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.2e-12  Score=61.66  Aligned_cols=34  Identities=35%  Similarity=0.755  Sum_probs=21.7

Q ss_pred             hhcCCCCCcccccCcccccCchhHHHhHHhhCCc
Q psy16923         71 NLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        71 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      |.|+|++||+|.+|++.|...+.|..|+++|+.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            3566666666666666666666666666665543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.4e-12  Score=62.75  Aligned_cols=33  Identities=30%  Similarity=0.715  Sum_probs=21.3

Q ss_pred             HHhhcCCCCCcccccCcccccCchhHHHhHHhh
Q psy16923         69 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        69 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      |.|.|++++||+|.+|++.|.+.++|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            456666666666666666666666666666644

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.6e-12  Score=61.38  Aligned_cols=31  Identities=42%  Similarity=0.889  Sum_probs=18.1

Q ss_pred             hh-CCCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         17 TH-GETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        17 ~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      +| +|+||.|.+|++.|.++.+|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            45 55666666666666666666666655554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=2.1e-12  Score=57.81  Aligned_cols=28  Identities=21%  Similarity=0.571  Sum_probs=23.4

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      |+||.|..|++.|.++++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6788888888888888888888888865

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.21  E-value=6.1e-12  Score=56.91  Aligned_cols=29  Identities=21%  Similarity=0.492  Sum_probs=23.3

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      +||.|++|++.|.+.++|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=6.9e-12  Score=58.37  Aligned_cols=31  Identities=52%  Similarity=0.974  Sum_probs=15.8

Q ss_pred             cCCCCceeccccccccCCHHhHHhHHhhcCC
Q psy16923         45 HRDTKAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        45 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      |++++||.|..|++.|...+.|..|++.|+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4455555555555555555555555555544

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.1e-11  Score=55.98  Aligned_cols=29  Identities=28%  Similarity=0.762  Sum_probs=24.1

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      |||.|.+|++.|.++++|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=1.1e-11  Score=58.44  Aligned_cols=29  Identities=34%  Similarity=0.676  Sum_probs=18.2

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      +|+||.|.+|++.|.++.+|..|+++|+.
T Consensus         4 GekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           4 GKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCccccCCCCCCcccChHHHHHHccccCC
Confidence            46666666666666666666666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.5e-11  Score=58.61  Aligned_cols=28  Identities=39%  Similarity=0.889  Sum_probs=17.1

Q ss_pred             hh-CCCcccCCCCcccCCCHHHHHHHHHh
Q psy16923         17 TH-GETPYGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        17 ~h-~~~~~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      +| +|+||.|+.|++.|.++.+|..|++.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            45 56666666666666666666666544

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=6e-11  Score=55.85  Aligned_cols=29  Identities=34%  Similarity=0.839  Sum_probs=16.5

Q ss_pred             cCCCCCcccccCcccccCchhHHHhHHhh
Q psy16923         73 HTGKRPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        73 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      |+|++||+|.+|++.|.+.++|..|+++|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcccc
Confidence            45555555555555555555555555543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.03  E-value=7.4e-11  Score=53.24  Aligned_cols=29  Identities=31%  Similarity=0.763  Sum_probs=18.8

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCCCC
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKR   77 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   77 (159)
                      +||.|..|++.|...+.|..|++.|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35666666666666666666666666653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=5.8e-11  Score=56.34  Aligned_cols=32  Identities=34%  Similarity=0.904  Sum_probs=18.2

Q ss_pred             ccCCC--CcccCCCHHHHHHHHHhcCCCCceecc
Q psy16923         23 YGCPH--CPMKLNTRRTLRMHLVVHRDTKAYQCV   54 (159)
Q Consensus        23 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~   54 (159)
                      |.|+.  |++.|.++..|.+|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44544  555555555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.01  E-value=4e-12  Score=64.30  Aligned_cols=37  Identities=16%  Similarity=0.475  Sum_probs=21.4

Q ss_pred             HHHHHHhh-CCCcccCCC--CcccCCCHHHHHHHHHhcCCC
Q psy16923         11 LKLHLDTH-GETPYGCPH--CPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        11 l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      |..|+. | +++||.|.+  |++.|.+.++|..|+++|+|+
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            444443 4 566666654  666666666666666666554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=5.9e-11  Score=51.68  Aligned_cols=25  Identities=28%  Similarity=0.599  Sum_probs=19.4

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhc
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      |||.|.+||+.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            5777777777777777777777776

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=8e-11  Score=52.52  Aligned_cols=26  Identities=42%  Similarity=0.798  Sum_probs=13.3

Q ss_pred             CceeccccccccCCHHhHHhHHhhcC
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHT   74 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~   74 (159)
                      +||.|..|++.|..++.|..|++.|+
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCCCcc
Confidence            44555555555555555555555544

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=3.4e-10  Score=51.25  Aligned_cols=28  Identities=25%  Similarity=0.519  Sum_probs=22.8

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCPH--CPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +||.|++  |++.|.+.++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.3e-10  Score=55.10  Aligned_cols=33  Identities=45%  Similarity=0.982  Sum_probs=30.5

Q ss_pred             eeccc--cccccCCHHhHHhHHhhcCCCCCccccc
Q psy16923         51 YQCVT--CGKSFRRSKDLKNHHNLHTGKRPYTCPW   83 (159)
Q Consensus        51 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~   83 (159)
                      |.|..  |++.|.+...|.+|++.|++++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67876  9999999999999999999999999963

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.9e-10  Score=51.74  Aligned_cols=27  Identities=37%  Similarity=0.715  Sum_probs=14.2

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCCC
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   76 (159)
                      ||.|..|++.|...+.|..|++.|+++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            455555555555555555555555544

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=6.4e-11  Score=59.74  Aligned_cols=37  Identities=22%  Similarity=0.481  Sum_probs=23.1

Q ss_pred             HHhHHhhcCCCCCccccc--CcccccCchhHHHhHHhhCC
Q psy16923         66 LKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        66 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~  103 (159)
                      +..|++ |.+++||.|.+  |++.|.+.++|..|+++|.+
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            444553 66666666655  66666666666666666544

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=4.2e-10  Score=51.03  Aligned_cols=28  Identities=25%  Similarity=0.667  Sum_probs=20.4

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCPH--CPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +||.|++  |++.|.+.++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5777766  777777777777777777664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5e-10  Score=48.67  Aligned_cols=25  Identities=32%  Similarity=0.741  Sum_probs=17.9

Q ss_pred             CCcccccCcccccCchhHHHhHHhh
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      +||+|.+||+.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4677777777777777777777754

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.6e-09  Score=49.48  Aligned_cols=29  Identities=24%  Similarity=0.529  Sum_probs=22.0

Q ss_pred             CcccCC--CCcccCCCHHHHHHHHHhcCCCC
Q psy16923         21 TPYGCP--HCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        21 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      +||.|+  .|++.|.+.++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            577885  48888888888888888887764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.75  E-value=3.3e-09  Score=48.63  Aligned_cols=28  Identities=29%  Similarity=0.666  Sum_probs=22.3

Q ss_pred             CCcccCCC--CcccCCCHHHHHHHHHhcCC
Q psy16923         20 ETPYGCPH--CPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        20 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   47 (159)
                      |+||.|.+  |++.|.+.++|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57888877  88888888888888888765

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=3.2e-09  Score=47.94  Aligned_cols=26  Identities=42%  Similarity=0.779  Sum_probs=13.4

Q ss_pred             ceeccc--cccccCCHHhHHhHHhhcCC
Q psy16923         50 AYQCVT--CGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        50 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   75 (159)
                      ||.|..  |++.|.+.+.|+.|++.|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            445544  55555555555555555544

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=4e-09  Score=45.76  Aligned_cols=29  Identities=28%  Similarity=0.819  Sum_probs=24.3

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      |+||.|++|+..|+++..+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57888888888888888888888888763

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.9e-09  Score=47.73  Aligned_cols=26  Identities=42%  Similarity=0.921  Sum_probs=13.1

Q ss_pred             ceeccc--cccccCCHHhHHhHHhhcCC
Q psy16923         50 AYQCVT--CGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        50 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   75 (159)
                      ||.|..  |++.|.+.+.|..|++.|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            445544  55555555555555555544

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=7.3e-09  Score=42.85  Aligned_cols=25  Identities=24%  Similarity=0.572  Sum_probs=14.0

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      |++|+.|++.|+++..|..|++.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            3455555555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=3.1e-09  Score=47.57  Aligned_cols=27  Identities=30%  Similarity=0.795  Sum_probs=17.9

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHhcCC
Q psy16923         21 TPYGCPH--CPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        21 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   47 (159)
                      +||.|.+  |++.|.+.++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666755  77777777777777666653

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.2e-08  Score=46.44  Aligned_cols=27  Identities=44%  Similarity=0.983  Sum_probs=15.8

Q ss_pred             ceecc--ccccccCCHHhHHhHHhhcCCC
Q psy16923         50 AYQCV--TCGKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus        50 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~   76 (159)
                      ||.|+  .|++.|.+.+.|..|++.|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            55554  3666666666666666666554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.6e-08  Score=41.81  Aligned_cols=26  Identities=46%  Similarity=0.890  Sum_probs=20.0

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCC
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      |++|++|++-|++++.|+.|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45688888888888888888887764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.56  E-value=2.5e-08  Score=45.58  Aligned_cols=27  Identities=30%  Similarity=0.798  Sum_probs=16.7

Q ss_pred             CCCccccc--CcccccCchhHHHhHHhhC
Q psy16923         76 KRPYTCPW--CSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        76 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h  102 (159)
                      ++||.|.+  |++.|.+.++|..|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            35666655  6666666666666666543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.1e-09  Score=45.51  Aligned_cols=26  Identities=35%  Similarity=0.851  Sum_probs=18.3

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHhcC
Q psy16923         21 TPYGCPH--CPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        21 ~~~~C~~--C~~~f~~~~~l~~H~~~h~   46 (159)
                      +||.|++  |++.|.+.++|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777663

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=2.2e-08  Score=44.68  Aligned_cols=24  Identities=38%  Similarity=0.890  Sum_probs=11.9

Q ss_pred             Cccccc--CcccccCchhHHHhHHhh
Q psy16923         78 PYTCPW--CSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        78 ~~~C~~--C~~~f~~~~~l~~H~~~~  101 (159)
                      ||.|.+  |++.|.+.+.|..|+++|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~H   27 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIH   27 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCcc
Confidence            445544  555555555555555443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2.7e-08  Score=43.92  Aligned_cols=25  Identities=44%  Similarity=1.031  Sum_probs=20.6

Q ss_pred             CCccccc--CcccccCchhHHHhHHhh
Q psy16923         77 RPYTCPW--CSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        77 ~~~~C~~--C~~~f~~~~~l~~H~~~~  101 (159)
                      +||.|++  |++.|.+.++|+.|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            5788877  888888888888888865

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=5.5e-08  Score=41.49  Aligned_cols=26  Identities=27%  Similarity=0.625  Sum_probs=17.1

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhc
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      |+||.|.+||+.|.+...-.+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            46666666666666666666666665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=1.3e-07  Score=40.33  Aligned_cols=26  Identities=27%  Similarity=0.767  Sum_probs=17.6

Q ss_pred             CCCcccccCcccccCchhHHHhHHhh
Q psy16923         76 KRPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        76 ~~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      ++||.|.+||+.|.+....++|.+.|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            35677777777777777777776654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.7e-07  Score=39.88  Aligned_cols=29  Identities=34%  Similarity=0.781  Sum_probs=22.4

Q ss_pred             CCceeccccccccCCHHhHHhHHhhcCCC
Q psy16923         48 TKAYQCVTCGKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus        48 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   76 (159)
                      ++||.|++|+..|.+++.+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46788888888888888888888877664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=3.4e-07  Score=38.70  Aligned_cols=28  Identities=32%  Similarity=0.705  Sum_probs=18.5

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      ++||+|..|...-...++|..|++.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4566666666666666666666666654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3e-07  Score=40.67  Aligned_cols=29  Identities=41%  Similarity=0.872  Sum_probs=17.4

Q ss_pred             eeccccccccCCHHhHHhHHhhcCCCCCc
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNLHTGKRPY   79 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   79 (159)
                      ..|..||+.|...-.|.+|..+|.+++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45666666666666666666566666554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1e-06  Score=38.93  Aligned_cols=31  Identities=23%  Similarity=0.400  Sum_probs=26.9

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCCCce
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDTKAY   51 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   51 (159)
                      +...|..||+.|.....|.+|..+|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4567999999999999999998899999886

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.06  E-value=1.5e-06  Score=40.28  Aligned_cols=28  Identities=29%  Similarity=0.647  Sum_probs=21.2

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      +.|.|..|++.|.+..+|-.|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            5677888888888888888887777654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.5e-06  Score=35.95  Aligned_cols=27  Identities=33%  Similarity=0.650  Sum_probs=13.3

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCC
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      +||+|+.|...-.+.+.|.-|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            345555555444444555555555443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.7e-06  Score=37.33  Aligned_cols=27  Identities=30%  Similarity=0.855  Sum_probs=20.3

Q ss_pred             CCccccc--CcccccCchhHHHhHHhhCC
Q psy16923         77 RPYTCPW--CSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        77 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  103 (159)
                      +||.|..  |++.+...+.|+.|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677766  78888888888888887664

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3.6e-06  Score=35.30  Aligned_cols=24  Identities=50%  Similarity=0.960  Sum_probs=12.7

Q ss_pred             eccccccccCCHHhHHhHHhhcCC
Q psy16923         52 QCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        52 ~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      .|..||+.|...+.|++|+..|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455555555555555555555544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=3.2e-06  Score=36.00  Aligned_cols=29  Identities=31%  Similarity=0.706  Sum_probs=24.3

Q ss_pred             CCcccccCcccccCchhHHHhHHhhCCch
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRRMHPEE  105 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  105 (159)
                      +||.|..|.+.....++|+.|.++.|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            57889999998889999999998887654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=6.7e-06  Score=34.81  Aligned_cols=26  Identities=27%  Similarity=0.646  Sum_probs=19.5

Q ss_pred             ccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      |.|+.|+......+-|..|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            67777777777777777777777764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=8.8e-06  Score=33.58  Aligned_cols=26  Identities=31%  Similarity=0.594  Sum_probs=21.0

Q ss_pred             cCCCCcccCCCHHHHHHHHHhcCCCC
Q psy16923         24 GCPHCPMKLNTRRTLRMHLVVHRDTK   49 (159)
Q Consensus        24 ~C~~C~~~f~~~~~l~~H~~~h~~~~   49 (159)
                      .|+.|.+.|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888887763

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=4.1e-06  Score=35.49  Aligned_cols=23  Identities=30%  Similarity=0.749  Sum_probs=16.4

Q ss_pred             cccCCCCcccCCCHHHHHHHHHh
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      ||.|..|+..|+++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56777777777777777777765

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.86  E-value=6e-06  Score=33.56  Aligned_cols=23  Identities=30%  Similarity=0.592  Sum_probs=16.4

Q ss_pred             ccCCCCcccCCCHHHHHHHHHhc
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~h   45 (159)
                      |+|..|.+.|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            56777777777777777777665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.4e-06  Score=34.73  Aligned_cols=27  Identities=22%  Similarity=0.406  Sum_probs=24.4

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcCCC
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   48 (159)
                      .+.|.+||+.|...+.|.+|+..|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357999999999999999999999874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=5.4e-06  Score=38.66  Aligned_cols=26  Identities=31%  Similarity=0.714  Sum_probs=23.6

Q ss_pred             CCCCCcccccCcccccCchhHHHhHH
Q psy16923         74 TGKRPYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        74 ~~~~~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      +|.+||.|.+|++.|..+..+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46799999999999999999999976

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=1e-05  Score=34.21  Aligned_cols=26  Identities=35%  Similarity=0.635  Sum_probs=17.9

Q ss_pred             eeccccccccCCHHhHHhHHhhcCCC
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~h~~~   76 (159)
                      |.|+.|+.....++.|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56777777777777777777777664

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.77  E-value=5.8e-06  Score=35.95  Aligned_cols=27  Identities=30%  Similarity=0.748  Sum_probs=20.9

Q ss_pred             CcccccCcccccCchhHHHhHHhhCCc
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRMHPE  104 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  104 (159)
                      ||.|.+|++.|.++.-|.+|.+..|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            577888888888888888888777754

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.1e-05  Score=33.65  Aligned_cols=26  Identities=31%  Similarity=0.700  Sum_probs=21.7

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      +||+|..|...-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68888888888888888888888875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.5e-05  Score=34.33  Aligned_cols=26  Identities=27%  Similarity=0.603  Sum_probs=15.4

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHhcC
Q psy16923         21 TPYGCPH--CPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        21 ~~~~C~~--C~~~f~~~~~l~~H~~~h~   46 (159)
                      +||.|..  |++.+...+.|..|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4566654  6666666666666666543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.65  E-value=1.7e-05  Score=32.18  Aligned_cols=22  Identities=36%  Similarity=0.789  Sum_probs=13.1

Q ss_pred             cccccCcccccCchhHHHhHHh
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRR  100 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~  100 (159)
                      |+|..|.+.|...++|.+|++.
T Consensus         1 ykcglcersfveksalsrhqrv   22 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CcccchHHHHHHHHHHHHHHHh
Confidence            4566666666666666666553

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.6e-05  Score=33.19  Aligned_cols=25  Identities=32%  Similarity=0.614  Sum_probs=21.7

Q ss_pred             CCcccccCcccccCchhHHHhHHhh
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      +||+|..|.+.-...+.|+.|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            6889999999888889999998875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.63  E-value=2.5e-05  Score=32.96  Aligned_cols=28  Identities=32%  Similarity=0.699  Sum_probs=18.3

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcCC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   47 (159)
                      +..|.|..|...|++.-.|..||.+|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            3456666677777766666666666665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.2e-05  Score=34.10  Aligned_cols=27  Identities=33%  Similarity=0.736  Sum_probs=18.3

Q ss_pred             CCcccccCcccccCchhHHHhHHhhCC
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      +||+|..|.......++|..|++..|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            366777777766777777777766554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.60  E-value=3.4e-05  Score=35.64  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=16.6

Q ss_pred             CCcccccCcccccCchhHHHhHHhhC
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      +.|+|.+|++.|.+.++|-.|++.|.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CccCCCCCCCccCCcccccchHhhhc
Confidence            34666666666666666666666543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=4.2e-05  Score=32.32  Aligned_cols=23  Identities=30%  Similarity=0.706  Sum_probs=14.2

Q ss_pred             ceeccccccccCCHHhHHhHHhh
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNL   72 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~   72 (159)
                      ||.|..|+..|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45666666666666666666654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.47  E-value=3.4e-05  Score=31.27  Aligned_cols=23  Identities=26%  Similarity=0.855  Sum_probs=18.6

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      .||+|..|...|.++.+|..|+-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            37888888888888888888875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=4.6e-05  Score=31.37  Aligned_cols=25  Identities=44%  Similarity=0.717  Sum_probs=16.9

Q ss_pred             eccccccccCCHHhHHhHHhhcCCC
Q psy16923         52 QCVTCGKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus        52 ~C~~C~~~f~~~~~l~~H~~~h~~~   76 (159)
                      +|+.|.+.|.++-.|+-|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4666777777777777776666665

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.45  E-value=4.7e-05  Score=32.07  Aligned_cols=25  Identities=40%  Similarity=0.889  Sum_probs=15.3

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHhc
Q psy16923         21 TPYGCPH--CPMKLNTRRTLRMHLVVH   45 (159)
Q Consensus        21 ~~~~C~~--C~~~f~~~~~l~~H~~~h   45 (159)
                      .||.|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566654  666666666666666554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=9.6e-05  Score=31.34  Aligned_cols=26  Identities=19%  Similarity=0.558  Sum_probs=18.5

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      +||.|..|.......++|..|+++.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            46777777777777777777777533

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=8.9e-05  Score=31.23  Aligned_cols=26  Identities=38%  Similarity=0.841  Sum_probs=15.3

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCC
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      .|.|..|...|.+.-.|..|+-+|+|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            45566666666666666666655554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=9e-05  Score=34.44  Aligned_cols=25  Identities=28%  Similarity=0.680  Sum_probs=17.7

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHH
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      +.+||.|..|++.|.....+.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            3567777777777777777777743

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.21  E-value=0.00011  Score=31.82  Aligned_cols=22  Identities=32%  Similarity=0.590  Sum_probs=12.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      ||.|.+|++.|.++.-|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            4555555555555555555544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.11  E-value=0.00017  Score=30.27  Aligned_cols=23  Identities=35%  Similarity=0.798  Sum_probs=10.7

Q ss_pred             ceeccc--cccccCCHHhHHhHHhh
Q psy16923         50 AYQCVT--CGKSFRRSKDLKNHHNL   72 (159)
Q Consensus        50 ~~~C~~--C~~~f~~~~~l~~H~~~   72 (159)
                      ||.|+.  |++.|...+.|++|.+.
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhc
Confidence            344433  44444444444444443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.00035  Score=28.88  Aligned_cols=22  Identities=27%  Similarity=0.617  Sum_probs=16.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      ||.|..||+.+-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5777777777777777777754

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00015  Score=30.61  Aligned_cols=24  Identities=21%  Similarity=0.563  Sum_probs=13.8

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHh
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      +||+|..|..-.++.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            355666666555566666666553

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=8.8e-05  Score=31.36  Aligned_cols=26  Identities=23%  Similarity=0.599  Sum_probs=13.1

Q ss_pred             cccCCC--CcccCCCHHHHHHHHHhcCC
Q psy16923         22 PYGCPH--CPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        22 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   47 (159)
                      ||.|..  |.+.|.+.-.|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455543  55555555555555554443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.0002  Score=28.90  Aligned_cols=22  Identities=36%  Similarity=0.786  Sum_probs=13.1

Q ss_pred             CcccccCcccccCchhHHHhHH
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      ||+|..|...|....+|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4566666666666666666554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00023  Score=32.58  Aligned_cols=27  Identities=22%  Similarity=0.584  Sum_probs=18.6

Q ss_pred             CCcccCC--CCcccCCCHHHHHHHHHhcC
Q psy16923         20 ETPYGCP--HCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        20 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~   46 (159)
                      ++||.|.  -|++.|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            5777773  47777777777777766653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00027  Score=32.33  Aligned_cols=26  Identities=31%  Similarity=0.811  Sum_probs=16.0

Q ss_pred             CCCccc--ccCcccccCchhHHHhHHhh
Q psy16923         76 KRPYTC--PWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        76 ~~~~~C--~~C~~~f~~~~~l~~H~~~~  101 (159)
                      ++||.|  +.|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            566666  33666666666666666544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00022  Score=30.84  Aligned_cols=26  Identities=42%  Similarity=0.982  Sum_probs=18.9

Q ss_pred             CCccccc--CcccccCchhHHHhHHhhC
Q psy16923         77 RPYTCPW--CSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        77 ~~~~C~~--C~~~f~~~~~l~~H~~~~h  102 (159)
                      +||.|..  |.+.|...++...|+.+.|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            4777866  8888888888888873334

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00046  Score=28.72  Aligned_cols=24  Identities=29%  Similarity=0.508  Sum_probs=16.7

Q ss_pred             CcccccCcccccCchhHHHhHHhh
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      |.+|+.|.+...+..+|+.|.+.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            456777777777777777777654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00067  Score=32.59  Aligned_cols=26  Identities=23%  Similarity=0.335  Sum_probs=22.7

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         21 TPYGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        21 ~~~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      -.|.|..|++.|.....|.+|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45889999999999999999988875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.00012  Score=31.70  Aligned_cols=21  Identities=29%  Similarity=0.664  Sum_probs=10.4

Q ss_pred             cccCCC--CcccCCCHHHHHHHH
Q psy16923         22 PYGCPH--CPMKLNTRRTLRMHL   42 (159)
Q Consensus        22 ~~~C~~--C~~~f~~~~~l~~H~   42 (159)
                      ||.|..  |.+.|...++-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            455544  555555554444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.63  E-value=0.00043  Score=29.18  Aligned_cols=20  Identities=40%  Similarity=0.680  Sum_probs=11.0

Q ss_pred             cccccCCHHhHHhHHhhcCC
Q psy16923         56 CGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        56 C~~~f~~~~~l~~H~~~h~~   75 (159)
                      |.++|.+...|.+|...|+|
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            55555555555555555544

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.53  E-value=0.001  Score=26.84  Aligned_cols=22  Identities=23%  Similarity=0.742  Sum_probs=17.7

Q ss_pred             ccCCCCcccCCCHHHHHHHHHh
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      |.|+.|-+.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00096  Score=27.72  Aligned_cols=25  Identities=28%  Similarity=0.677  Sum_probs=16.8

Q ss_pred             cccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      |-+|+.|....+++..|..|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3457777777777777777776663

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.45  E-value=0.0011  Score=27.38  Aligned_cols=22  Identities=27%  Similarity=0.779  Sum_probs=13.7

Q ss_pred             CcccccCcccccCchhHHHhHH
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      ||+|..||+.+-+..+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4666666666666666666643

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00078  Score=32.34  Aligned_cols=26  Identities=19%  Similarity=0.511  Sum_probs=22.9

Q ss_pred             CcccccCcccccCchhHHHhHHhhCC
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~h~  103 (159)
                      .|.|..|++.|+....|+.|...|-.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            48999999999999999999887653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.33  E-value=0.0011  Score=26.78  Aligned_cols=24  Identities=33%  Similarity=0.917  Sum_probs=15.8

Q ss_pred             cccccCcccccCchhHHHhHHhhC
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.|+.|-+.|.+..++..|.++.|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            566677777777777666666544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.0043  Score=25.59  Aligned_cols=24  Identities=33%  Similarity=0.760  Sum_probs=12.8

Q ss_pred             cccccCcccccCchhHHHhHHhhC
Q psy16923         79 YTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      |.|+.|+-...+.++|..|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            455555555555555555555433

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.012  Score=24.58  Aligned_cols=22  Identities=23%  Similarity=0.714  Sum_probs=13.8

Q ss_pred             ccCCCCcccCCCHHHHHHHHHh
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      |.|..|++..++...+..|...
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            5666666666666666666554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.0039  Score=27.42  Aligned_cols=24  Identities=21%  Similarity=0.587  Sum_probs=17.9

Q ss_pred             CcccccCcccccCchhHHHhHHhh
Q psy16923         78 PYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        78 ~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      .|.|..|++.|.++..+.+|....
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            477888888888887777776644

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.38  E-value=0.0065  Score=26.43  Aligned_cols=24  Identities=21%  Similarity=0.486  Sum_probs=19.7

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      ...|.|.-||-.|++.+.|..|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            345889999999999999988864

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.0059  Score=27.10  Aligned_cols=27  Identities=19%  Similarity=0.460  Sum_probs=20.1

Q ss_pred             cccCCC--Cc---ccCCCHHHHHHHHHhcCCC
Q psy16923         22 PYGCPH--CP---MKLNTRRTLRMHLVVHRDT   48 (159)
Q Consensus        22 ~~~C~~--C~---~~f~~~~~l~~H~~~h~~~   48 (159)
                      .|.|.+  |.   +.|.....|..|+|.|+|+
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            355543  54   5688999999999999874

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0087  Score=26.26  Aligned_cols=26  Identities=35%  Similarity=0.827  Sum_probs=16.7

Q ss_pred             ceeccccccccCCHHhHHhHHhhcCC
Q psy16923         50 AYQCVTCGKSFRRSKDLKNHHNLHTG   75 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~l~~H~~~h~~   75 (159)
                      .|.|..|++.|.+...+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            36677777777777777666655443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.01  Score=24.41  Aligned_cols=22  Identities=32%  Similarity=0.803  Sum_probs=15.3

Q ss_pred             ccCCCCcccCCCHHHHHHHHHh
Q psy16923         23 YGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        23 ~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      |.|+.|+....++++|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5677777777777777777664

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.024  Score=23.62  Aligned_cols=22  Identities=32%  Similarity=0.683  Sum_probs=14.7

Q ss_pred             eeccccccccCCHHhHHhHHhh
Q psy16923         51 YQCVTCGKSFRRSKDLKNHHNL   72 (159)
Q Consensus        51 ~~C~~C~~~f~~~~~l~~H~~~   72 (159)
                      |.|..|++...+...++.|...
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            5677777777777777766543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.71  E-value=0.018  Score=24.47  Aligned_cols=26  Identities=31%  Similarity=0.561  Sum_probs=14.1

Q ss_pred             cccCCC--CcccCCCHHHHHHHHHhcCC
Q psy16923         22 PYGCPH--CPMKLNTRRTLRMHLVVHRD   47 (159)
Q Consensus        22 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   47 (159)
                      .|.|..  |+-.|.....|+.|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            455533  55555555555555555544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.70  E-value=0.017  Score=23.54  Aligned_cols=24  Identities=25%  Similarity=0.616  Sum_probs=16.6

Q ss_pred             ccCCC--CcccCCCHHHHHHHHHhcC
Q psy16923         23 YGCPH--CPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        23 ~~C~~--C~~~f~~~~~l~~H~~~h~   46 (159)
                      |.|..  |++.|+....|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45543  7888888887877776653

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.035  Score=22.91  Aligned_cols=19  Identities=26%  Similarity=0.543  Sum_probs=14.5

Q ss_pred             CcccCCCHHHHHHHHHhcC
Q psy16923         28 CPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        28 C~~~f~~~~~l~~H~~~h~   46 (159)
                      |++.|...+.+..|+.+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            7788888888888777663

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.95  E-value=0.043  Score=22.85  Aligned_cols=26  Identities=31%  Similarity=0.667  Sum_probs=18.0

Q ss_pred             Cccccc--CcccccCchhHHHhHHhhCC
Q psy16923         78 PYTCPW--CSRTFANGSNCRSHKRRMHP  103 (159)
Q Consensus        78 ~~~C~~--C~~~f~~~~~l~~H~~~~h~  103 (159)
                      .|.|+.  |+..|.+..+++.|..+-|.
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhcc
Confidence            356643  77888888888888766553

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.63  E-value=0.044  Score=25.98  Aligned_cols=27  Identities=33%  Similarity=0.635  Sum_probs=20.5

Q ss_pred             CCCcccccCcccccCchhHHHhHHhhC
Q psy16923         76 KRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        76 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      +.|-.|++|+.......+|++|++..|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            456778888888778888888877655

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.47  E-value=0.028  Score=24.83  Aligned_cols=20  Identities=30%  Similarity=0.369  Sum_probs=14.8

Q ss_pred             ccccCCHHhHHhHHhhcCCC
Q psy16923         57 GKSFRRSKDLKNHHNLHTGK   76 (159)
Q Consensus        57 ~~~f~~~~~l~~H~~~h~~~   76 (159)
                      ++.|.....|..|+|.|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34577778888888888764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.31  E-value=0.016  Score=30.29  Aligned_cols=22  Identities=18%  Similarity=0.339  Sum_probs=13.8

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy16923         22 PYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        22 ~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      .|-|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3556666666666666666654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.90  E-value=0.095  Score=24.78  Aligned_cols=26  Identities=38%  Similarity=0.721  Sum_probs=15.2

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHh
Q psy16923         19 GETPYGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        19 ~~~~~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      ++.|-.|++|+-...+..+|.+|+..
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            34555666666666666666666543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.46  E-value=0.053  Score=24.53  Aligned_cols=26  Identities=38%  Similarity=0.747  Sum_probs=16.9

Q ss_pred             CCceeccccccccCCHHhHHhHHhhcCCCCCcccccCcc
Q psy16923         48 TKAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSR   86 (159)
Q Consensus        48 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   86 (159)
                      .+.|.|.+||..             +.++.|-+|++|+.
T Consensus         3 ~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCE-------------EESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCE-------------eeCCCCCcCCCCCC
Confidence            355778888754             23455677888874

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.44  E-value=0.033  Score=29.08  Aligned_cols=21  Identities=33%  Similarity=0.679  Sum_probs=13.8

Q ss_pred             cccccCcccccCchhHHHhHH
Q psy16923         79 YTCPWCSRTFANGSNCRSHKR   99 (159)
Q Consensus        79 ~~C~~C~~~f~~~~~l~~H~~   99 (159)
                      |-|..|++.|.+...|..|.+
T Consensus        16 fYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTT
T ss_pred             EecccccCccCCHHHHHHHHc
Confidence            566666666666666666654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.21  E-value=0.053  Score=23.75  Aligned_cols=27  Identities=33%  Similarity=0.589  Sum_probs=18.5

Q ss_pred             CCCcccccCcccccCchhHHHhHHhhC
Q psy16923         76 KRPYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        76 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      +..|.|.+|.+.+..-+++.+|.-..|
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            345777777777777777777766555

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.11  E-value=0.055  Score=24.65  Aligned_cols=25  Identities=36%  Similarity=0.866  Sum_probs=16.4

Q ss_pred             CceeccccccccCCHHhHHhHHhhcCCCCCcccccCcc
Q psy16923         49 KAYQCVTCGKSFRRSKDLKNHHNLHTGKRPYTCPWCSR   86 (159)
Q Consensus        49 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   86 (159)
                      +.|.|..||..+             .++.|-.|++|+.
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTTCC
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCCCC
Confidence            457788887642             2455677888864

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.02  E-value=0.093  Score=22.95  Aligned_cols=25  Identities=24%  Similarity=0.444  Sum_probs=16.0

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHh
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVV   44 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~   44 (159)
                      +..|.|..|.+.+.-.+++.+|..+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            3456677777777766766666543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.78  E-value=0.043  Score=28.13  Aligned_cols=16  Identities=19%  Similarity=0.754  Sum_probs=8.1

Q ss_pred             ceeccccccccCCHHh
Q psy16923         50 AYQCVTCGKSFRRSKD   65 (159)
Q Consensus        50 ~~~C~~C~~~f~~~~~   65 (159)
                      .|.|+.|++.|.....
T Consensus        14 ~y~Cp~C~~~ys~Lda   29 (62)
T d1vd4a_          14 SFKCPVCSSTFTDLEA   29 (62)
T ss_dssp             EEECSSSCCEEEHHHH
T ss_pred             ceECCCCCCCcchhhH
Confidence            4555555555544443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.29  E-value=0.083  Score=21.86  Aligned_cols=21  Identities=38%  Similarity=0.683  Sum_probs=14.1

Q ss_pred             ccCcccccCchhHHHhHHhhC
Q psy16923         82 PWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        82 ~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      +.|++.|++++.|..|.+.-|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            347777777777777765433

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.72  E-value=0.3  Score=21.33  Aligned_cols=24  Identities=25%  Similarity=0.527  Sum_probs=18.1

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLV   43 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~   43 (159)
                      .+.|.|+.|-+-.++...+.+|+.
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHH
Confidence            466778888877777877777765

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.31  E-value=0.2  Score=25.44  Aligned_cols=27  Identities=37%  Similarity=0.786  Sum_probs=22.2

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHhcC
Q psy16923         20 ETPYGCPHCPMKLNTRRTLRMHLVVHR   46 (159)
Q Consensus        20 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   46 (159)
                      ...|.|..|...|.+...|..|+..|.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhcc
Confidence            356889999999999988988887774

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=86.27  E-value=0.25  Score=22.32  Aligned_cols=13  Identities=0%  Similarity=-0.235  Sum_probs=6.7

Q ss_pred             CCcccccCccccc
Q psy16923         77 RPYTCPWCSRTFA   89 (159)
Q Consensus        77 ~~~~C~~C~~~f~   89 (159)
                      ..-.|+.||..+.
T Consensus        21 ~~g~CD~cg~~L~   33 (37)
T d2ak3a2          21 TMGIDDLTGEPLV   33 (37)
T ss_dssp             STTBCTTTCCBCB
T ss_pred             ccCCccCCCCcCE
Confidence            3445666655443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.89  E-value=0.39  Score=24.33  Aligned_cols=25  Identities=20%  Similarity=0.458  Sum_probs=14.0

Q ss_pred             CCcccccCcccccCchhHHHhHHhh
Q psy16923         77 RPYTCPWCSRTFANGSNCRSHKRRM  101 (159)
Q Consensus        77 ~~~~C~~C~~~f~~~~~l~~H~~~~  101 (159)
                      ..|.|..|.-.|.+-..|..|+..|
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhc
Confidence            3455666665565555666665543

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=81.98  E-value=0.62  Score=28.59  Aligned_cols=39  Identities=23%  Similarity=0.322  Sum_probs=27.1

Q ss_pred             HHhHHhHHhhcCCC-C------CcccccCcccccCchhHHHhHHhhC
Q psy16923         63 SKDLKNHHNLHTGK-R------PYTCPWCSRTFANGSNCRSHKRRMH  102 (159)
Q Consensus        63 ~~~l~~H~~~h~~~-~------~~~C~~C~~~f~~~~~l~~H~~~~h  102 (159)
                      -..|..|++..... +      -|+|..||+. ..-.+|..|++.|-
T Consensus       124 GgrlieHiK~~m~~GqDyvFWQFYKCe~CgKY-vDie~~~~H~k~HG  169 (218)
T d2czra1         124 GAALVNHIKNNALAGQDYIFWQFYKCEECGKY-VDIENLEAHLREHG  169 (218)
T ss_dssp             HHHHHHHHHTTCCBTTTEEEEEEEECTTTCCE-EEGGGHHHHHHTTT
T ss_pred             hHHHHHHHHhccccCcceEEEEEeehhhcCce-ecHHHHHHHHHHcC
Confidence            35778888764321 1      2799999984 56678899999654