Psyllid ID: psy16925

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MYLQHFLGIRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMKNV
Secondary Structure (PSIPRED)
ccccccccHHHHHHHcccccccccccccccccccccHHHHHHcccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEccccHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccEccccccEEcccccccccccEccccHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccccccccccEccccEEEc
Coil and Loop (DISEMBL)
MYLQHFLGIRAAGFRNASTLGKYSLALMVTRfssrsavtahtkavhlgerpfvchecgqsfaskgilqehltihsddapwkcdicskkslklsnvscgwypdeskdlknhhnlhtgkrpytcpwcsrtfangsncrshkrrmhpeeLKLYESSLGKIFLYGKMKNV
Flexible Loop (DISEMBL)
MYLQHFLGIRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFangsncrshkrrmhpeelklyesslgkiflygkmknv
Low Complexity Region (SEG)
MYLQHFLGIRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMKNV
Disordered region (IsUnstruct)
**LQHFLGIRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGS**************KLYESSLGKIFLYG*****
Disordered Region (DISOPRED)
MYLQHFLGIRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMKN*
Disordered Region (DISEMBL)
MYLQHFLGIRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMKNV
Disordered Region (DISPRO)
MYLQHFLGIRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMKN*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYLQHFLGIRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMKNV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
Q14588	700	Zinc finger protein 234 O	yes	N/A	0.765	0.181	0.358	7e-17
P18715	337	Gastrula zinc finger prot	N/A	N/A	0.710	0.350	0.353	1e-16
Q4V348	819	Zinc finger protein 658B	no	N/A	0.807	0.163	0.357	3e-16
Q5TYW1	1059	Zinc finger protein 658 O	no	N/A	0.753	0.118	0.372	3e-16
Q8TD23	568	Zinc finger protein 675 O	no	N/A	0.680	0.198	0.354	3e-16
Q9NYT6	803	Zinc finger protein 226 O	no	N/A	0.650	0.134	0.376	3e-16
Q8BJ90	317	Zinc finger protein 771 O	no	N/A	0.753	0.394	0.335	5e-16
P35789	620	Zinc finger protein 93 OS	no	N/A	0.783	0.209	0.317	6e-16
D3ZUU2	707	GDNF-inducible zinc finge	no	N/A	0.644	0.151	0.354	6e-16
Q7L2R6	523	Zinc finger protein 765 O	no	N/A	0.680	0.216	0.354	6e-16

>sp|Q14588|ZN234_HUMAN Zinc finger protein 234 OS=Homo sapiens GN=ZNF234 PE=2 SV=3

 Score = 86.3 bits (212), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 18/145 (12%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS RS +T H K +H GE+P+ C ECG++F     LQEH  IH+ + P+KCD C K   +
Sbjct: 241 FSRRSTLTVHCK-LHSGEKPYNCEECGRAFIHASHLQEHQRIHTGEKPFKCDTCGKNFRR 299

Query: 92  LSNVS----------------CGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNC 135
            S ++                CG     S +L+ H  +HTG++PY C  C + F   S  
Sbjct: 300 RSALNNHCMVHTGEKPYKCEDCGKCFTCSSNLRIHQRVHTGEKPYKCEECGKCFIQPSQF 359

Query: 136 RSHKRRMHPEELKLYESSLGKIFLY 160
           ++H RR+H  E        GK F+Y
Sbjct: 360 QAH-RRIHTGEKPYVCKVCGKGFIY 383

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|P18715|ZG26_XENLA Gastrula zinc finger protein XlCGF26.1 (Fragment) OS=Xenopus laevis PE=3 SV=1

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 15/133 (11%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK-SL 90
           F+ R+++  H K +H GE+PF C ECG+SF+ K  L+EH  IH+ + P+ C  C K  S 
Sbjct: 211 FTQRTSLQNHVK-IHTGEKPFTCTECGKSFSEKKTLREHNKIHTGEKPFTCTYCGKSFSQ 269

Query: 91  KLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY 150
           ++S             L+NH  +HTG++P++C  C + F   S  +SH +R H  E    
Sbjct: 270 RIS-------------LQNHFKIHTGEKPFSCTECGKCFTIKSTLQSHLKRTHTGEKPFT 316

Query: 151 ESSLGKIFLYGKM 163
            +  GK F   K+
Sbjct: 317 CTECGKSFTKKKI 329

May be involved in transcriptional regulation.

Xenopus laevis (taxid: 8355)

>sp|Q4V348|Z658B_HUMAN Zinc finger protein 658B OS=Homo sapiens GN=ZNF658B PE=2 SV=1

 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 20/154 (12%)

Query: 23  YSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           Y  +     F+  SA+ AH + +H GE+P+ C+ECG+SFA   +L+ H  IH+ + P++C
Sbjct: 362 YECSDCEKTFAHNSALRAHHR-IHTGEKPYECNECGRSFAHISVLKAHQRIHTREKPYEC 420

Query: 83  DICSK-----KSLKL-SNVSCGWYPDESKD----------LKNHHNLHTGKRPYTCPWCS 126
           + C +      +L+    +  G  P E  D          LK H  +HTG++PY C  C 
Sbjct: 421 NECGRSFTYNSALRAHQRIHTGRKPYECSDCEKTFAHNSALKIHQRIHTGEKPYKCNECE 480

Query: 127 RTFANGSNCRSHKRRMHPEELKLYE-SSLGKIFL 159
           +TFA+ S  R+H+  +H  E KLYE S  GK F 
Sbjct: 481 KTFAHNSALRAHQ-NIHTGE-KLYECSECGKTFF 512

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens GN=ZNF658 PE=2 SV=2

 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 20/145 (13%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSK---- 87
           F+  SA+ AH + +H GE+P+ C+ECG+SFA   +L+ H  IH+ + P++C+ C +    
Sbjct: 611 FAHNSALRAHHR-IHTGEKPYECNECGRSFAHISVLKAHQRIHTGEKPYECNECGRSFTY 669

Query: 88  -KSLKL-SNVSCGWYPDESKD----------LKNHHNLHTGKRPYTCPWCSRTFANGSNC 135
             +L+    +  G  P E  D          LK H  +HTG++PY C  C +TFA+ S  
Sbjct: 670 NSALRAHQRIHTGRKPYECSDCEKTFAHNSALKIHQRIHTGEKPYECNECEKTFAHNSAL 729

Query: 136 RSHKRRMHPEELKLYE-SSLGKIFL 159
           R+H+  +H  E KLYE S  GK F 
Sbjct: 730 RAHQ-NIHTGE-KLYECSECGKTFF 752

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8TD23|ZN675_HUMAN Zinc finger protein 675 OS=Homo sapiens GN=ZNF675 PE=1 SV=3

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 14/127 (11%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           F+  S +T H K +H GE+P++C ECG++F     L  H  IH+ + P+KC+        
Sbjct: 293 FNQFSNLTTH-KKIHTGEQPYICEECGKAFTQSSTLTTHKRIHTGEKPYKCE-------- 343

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
                CG   + S  L  H N+HTG++PY C  C + F   SN   H R++H EE     
Sbjct: 344 ----ECGKAFNRSSKLTEHKNIHTGEQPYKCEECGKAFNRSSNLTEH-RKIHTEEKPYKC 398

Query: 152 SSLGKIF 158
              GK F
Sbjct: 399 KECGKAF 405

May be involved in transcriptional regulation. May play a role during osteoclast differentiation by modulating TRAF6 signaling activity.

Homo sapiens (taxid: 9606)

>sp|Q9NYT6|ZN226_HUMAN Zinc finger protein 226 OS=Homo sapiens GN=ZNF226 PE=1 SV=2

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 17/125 (13%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK--- 88
           F   S + AH + VH GE+PF C ECG+SF     LQ H  +H+ D P+KCD C K    
Sbjct: 624 FRQASNLLAHQR-VHSGEKPFKCEECGKSFGRSAHLQAHQKVHTGDKPYKCDECGKGFKW 682

Query: 89  SLKLSN-------------VSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNC 135
           SL L                 CG Y  ++  L+ H ++HTG++PY C  C + F+  S  
Sbjct: 683 SLNLDMHQRVHTGEKPYKCGECGKYFSQASSLQLHQSVHTGEKPYKCDVCGKVFSRSSQL 742

Query: 136 RSHKR 140
           +SH+R
Sbjct: 743 QSHQR 747

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BJ90|ZN771_MOUSE Zinc finger protein 771 OS=Mus musculus GN=Znf771 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 68/143 (47%), Gaps = 18/143 (12%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           F+ RS +  H +  H GERPF C ECG+ F+ K  L +H   H+ + P++C  C K+   
Sbjct: 72  FARRSTLAKHAR-THTGERPFACTECGRCFSQKSALTKHGRTHTGERPYQCPECDKRFSA 130

Query: 92  LSNVS----------------CGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNC 135
            SN+                 CG    +S +   H  +HTG++PY CP C R F  GS+C
Sbjct: 131 ASNLRQHRRRHTGEKPYACAHCGRRFAQSSNYAQHLRVHTGEKPYACPDCGRAF-GGSSC 189

Query: 136 RSHKRRMHPEELKLYESSLGKIF 158
            +  RR H  E     +  G  F
Sbjct: 190 LARHRRTHTGERPYACADCGTRF 212

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|P35789|ZNF93_HUMAN Zinc finger protein 93 OS=Homo sapiens GN=ZNF93 PE=2 SV=4

 Score = 83.6 bits (205), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           F+  S +  H K +H GE+P++C ECG++F     L  H  IH+ + P+KCD C K  + 
Sbjct: 182 FNQFSTLITH-KKIHTGEKPYICEECGKAFKYSSALNTHKRIHTGEKPYKCDKCDKAFIA 240

Query: 92  LSNVS----------------CGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNC 135
            S +S                CG   ++S  L  H  +HTG++PY C  C + F   S  
Sbjct: 241 SSTLSKHEIIHTGKKPYKCEECGKAFNQSSTLTKHKKIHTGEKPYKCEECGKAFNQSSTL 300

Query: 136 RSHKRRMHPEELKLYESSLGKIFLYGKM 163
             HK ++H  E        GK F Y ++
Sbjct: 301 TKHK-KIHTGEKPYVCEECGKAFKYSRI 327

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|D3ZUU2|GZF1_RAT GDNF-inducible zinc finger protein 1 OS=Rattus norvegicus GN=Gzf1 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 17/124 (13%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL 90
           RF+    +  H K  H GERPF+C  CG+SFASK  L+ H  IH+   P+KC++C +   
Sbjct: 470 RFTQNHMLIYH-KRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCLRTFA 528

Query: 91  KLSNV----------------SCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSN 134
           + +++                 CG    +   L+ HH +HTG++PY C  C RTF + S 
Sbjct: 529 QRNSLYQHIKVHTGERPYCCDQCGKQFTQVNALQRHHRIHTGEKPYMCNACGRTFTDKST 588

Query: 135 CRSH 138
            R H
Sbjct: 589 LRRH 592

Transcriptional repressor. Binds the GZF1 responsive element (GRE) (consensus: 5'-TGCGCN[TG][CA]TATA-3'). May be regulating VSX2/HOX10 expression.

Rattus norvegicus (taxid: 10116)

>sp|Q7L2R6|ZN765_HUMAN Zinc finger protein 765 OS=Homo sapiens GN=ZNF765 PE=2 SV=2

 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 14/127 (11%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           F  +S +  H + +H GE+P+ C+ECG++F+ K  L  H  +H+ + P+KC+ C K   +
Sbjct: 308 FHFKSKLQIH-RRIHTGEKPYKCNECGKTFSQKSYLTCHRRLHTGEKPYKCNECGKTFSR 366

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
            S+ +C            HH +HTG++PY C  CS+TF++ S+   H RR+H EE     
Sbjct: 367 KSHFTC------------HHRVHTGEKPYKCNECSKTFSHKSSLTYH-RRLHTEEKPYKC 413

Query: 152 SSLGKIF 158
           +  GK F
Sbjct: 414 NECGKTF 420

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
242025650	738	zinc finger protein, putative [Pediculus	0.759	0.170	0.491	4e-38
157134662	526	hypothetical protein AaeL_AAEL013154 [Ae	0.740	0.233	0.427	3e-28
170049176	636	conserved hypothetical protein [Culex qu	0.716	0.187	0.432	9e-28
158299706	433	AGAP009010-PA [Anopheles gambiae str. PE	0.807	0.309	0.361	2e-23
312379353	297	hypothetical protein AND_08820 [Anophele	0.897	0.501	0.343	1e-21
195053099	605	GH13825 [Drosophila grimshawi] gi|193900	0.753	0.206	0.341	1e-19
195433986	665	GK14921 [Drosophila willistoni] gi|19416	0.746	0.186	0.356	2e-19
195385012	622	GJ13556 [Drosophila virilis] gi|19414765	0.753	0.200	0.335	3e-19
194879352	583	GG21202 [Drosophila erecta] gi|190657410	0.801	0.228	0.327	1e-18
194760481	579	GF14427 [Drosophila ananassae] gi|190616	0.753	0.215	0.352	1e-18

>gi|242025650|ref|XP_002433237.1| zinc finger protein, putative [Pediculus humanus corporis] gi|212518778|gb|EEB20499.1| zinc finger protein, putative [Pediculus humanus corporis]

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 106/169 (62%), Gaps = 43/169 (25%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSD-------------- 76
           +F S+SAV+AH +AVH GERPFVC +CG SF SKGIL EHLTIHSD              
Sbjct: 398 KFCSKSAVSAHVRAVHFGERPFVCDQCGHSFTSKGILHEHLTIHSDVYNFHCKDCNKSFK 457

Query: 77  -------------DAPWKCDICS-----KKSLKL-----------SNVSCGWYPDESKDL 107
                        +  ++C +C+     +++L++              +CG     SKDL
Sbjct: 458 TKYRLKIHMDTHVETRYQCPVCTLTLNTRRTLRMHLLVHKDDKAFQCTTCGKAFKRSKDL 517

Query: 108 KNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGK 156
           KNH+NLHTG+RPYTCP+C RTFANGSNCRSHKRRMHPEELK+YE++L +
Sbjct: 518 KNHYNLHTGRRPYTCPFCQRTFANGSNCRSHKRRMHPEELKMYEAALAQ 566

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157134662|ref|XP_001663336.1| hypothetical protein AaeL_AAEL013154 [Aedes aegypti] gi|108870396|gb|EAT34621.1| AAEL013154-PA [Aedes aegypti]

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 89/166 (53%), Gaps = 43/166 (25%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK-- 88
           +FS    V AH KAVH+GERP++C ECG++F +KG L+EH   HSDD P++C  C KK  
Sbjct: 343 KFSKLVNVQAHIKAVHIGERPYICEECGKAFGTKGALKEHQITHSDDKPYQCAHCPKKFK 402

Query: 89  ------------------------------SLKLSNVS-----------CGWYPDESKDL 107
                                         +LK+  V            CG     SK L
Sbjct: 403 NLPRLKTHEDIHNDTLYVCPHCGLQLNTKRTLKMHMVVHSDQKKFKCQYCGNEYKRSKAL 462

Query: 108 KNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS 153
           KNH  LHTG RPY CP+C +TFANGSNCRSHK++ HP+EL   E+S
Sbjct: 463 KNHLILHTGLRPYQCPFCEKTFANGSNCRSHKKKAHPKELAALEAS 508

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170049176|ref|XP_001854343.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167871059|gb|EDS34442.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 88/162 (54%), Gaps = 43/162 (26%)

Query: 38  VTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK--------- 88
           V AH KAVH+GERP+VC ECG++F +KG L+EH   HSD+ P++C  C KK         
Sbjct: 357 VQAHIKAVHIGERPYVCEECGKAFGTKGALKEHQVTHSDEKPFQCSHCPKKFKNLPRLKT 416

Query: 89  -----------------------SLKLSNVS-----------CGWYPDESKDLKNHHNLH 114
                                  +LK+  V            CG     SK LKNH  LH
Sbjct: 417 HEDIHTDTLYVCPHCGLQLNTKRTLKMHMVVHSDQKKFKCQYCGNEYKRSKALKNHLILH 476

Query: 115 TGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGK 156
           TG RPY CP+C +TFANGSNCRSHK++ HP+EL   E+S G+
Sbjct: 477 TGLRPYQCPFCEKTFANGSNCRSHKKKAHPKELAALEASGGQ 518

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158299706|ref|XP_319758.4| AGAP009010-PA [Anopheles gambiae str. PEST] gi|157013646|gb|EAA15157.4| AGAP009010-PA [Anopheles gambiae str. PEST]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 89/177 (50%), Gaps = 43/177 (24%)

Query: 23  YSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           YS  +    F+  S   AH + +H G +P++C ECG+ F+SKG L+EH  +HS++ P+KC
Sbjct: 242 YSCEICRKVFTKSSIRRAHMRMMHEGAKPYMCEECGKPFSSKGALKEHYIVHSEERPFKC 301

Query: 83  DIC--------------------------------SKKSLKLSNV-----------SCGW 99
             C                                +K++L +  V            CG 
Sbjct: 302 AYCPKSFKNAPRLKTHEDTHNDTLYVCPHCGLKLNTKRTLNMHMVVHSDQKKFKCQECGN 361

Query: 100 YPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGK 156
               SK LK H  LHTG RPY CP+C +TFANGSNCRSHK++ HP EL   E++ G+
Sbjct: 362 EYKRSKALKAHLILHTGLRPYQCPFCDKTFANGSNCRSHKKKFHPRELAALEAAGGQ 418

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312379353|gb|EFR25654.1| hypothetical protein AND_08820 [Anopheles darlingi]

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 89/192 (46%), Gaps = 43/192 (22%)

Query: 9   IRAAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQ 68
           IRA    +        + L  +    + +V  H    H   R FVC ECG+ FA++  L+
Sbjct: 92  IRARYLGDMFDDDAPEMLLPHSDLEDKGSVKHHILVNHHEFRTFVCEECGKPFATRSALK 151

Query: 69  EHLTIHSDDAPWKCDICSKK------------------------SLKLSNVS-------- 96
           EHL +HSD+ P++C  C+K+                         LKL+           
Sbjct: 152 EHLIVHSDEMPYQCAFCAKRFKNSGRLKTHEDTHNETMYVCPHCGLKLNTRRTLNMHLVV 211

Query: 97  -----------CGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
                      CG      K LK H  LHTG RPYTCP+C +TF NGSNCRSHK++ HP+
Sbjct: 212 HSDMKKFKCQYCGNEYKRGKALKAHLILHTGLRPYTCPFCDKTFTNGSNCRSHKKKFHPK 271

Query: 146 ELKLYESSLGKI 157
           EL   E+S G+I
Sbjct: 272 ELAELEASGGQI 283

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195053099|ref|XP_001993468.1| GH13825 [Drosophila grimshawi] gi|193900527|gb|EDV99393.1| GH13825 [Drosophila grimshawi]

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 45/170 (26%)

Query: 31  RFSSRSAVTAHTKAVHLGERP--FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
           +F++ ++  +H + +H  ERP   +C +CG    S   L+EHL  H+D AP++CD+C K 
Sbjct: 317 KFTTNASAQSHAQYMHQEERPRPVICEQCGVGVHSLNALKEHLLSHTDYAPYECDVCKKC 376

Query: 89  SLKLSNVS-------------------------------------------CGWYPDESK 105
              LS +                                            CG     +K
Sbjct: 377 FKSLSRLKHHKETHDPHKYICPECGMQLNSRPTLNRHRLVHTDQMQHKCDYCGREFKRAK 436

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
            LKNH  LHTG +PY+C +C RTFANGSNCR+HK++ HPEEL   E++ G
Sbjct: 437 ALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGG 486

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195433986|ref|XP_002064987.1| GK14921 [Drosophila willistoni] gi|194161072|gb|EDW75973.1| GK14921 [Drosophila willistoni]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 84/171 (49%), Gaps = 47/171 (27%)

Query: 31  RFSSRSAVTAHTKAVHLGERP--FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
           +F+S ++   H + +H  ERP   +C +CG +  S   L+EH+  H+D AP++CDIC KK
Sbjct: 339 KFTSNASALQHVQYMHQDERPRPVICEQCGVAVHSISALKEHVLKHTDYAPFECDIC-KK 397

Query: 89  SLKLSN--------------------------------------------VSCGWYPDES 104
             K SN                                              CG     +
Sbjct: 398 CFKSSNRLKHHKETHDPHKYICPECGMQLNSRPTLNRHRLVHTDKMQHKCDYCGKEFKRA 457

Query: 105 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           K LKNH  LHTG +PY+C +C RTFANGSNCR+HK++ HPEEL   E++ G
Sbjct: 458 KALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGG 508

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195385012|ref|XP_002051202.1| GJ13556 [Drosophila virilis] gi|194147659|gb|EDW63357.1| GJ13556 [Drosophila virilis]

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 45/170 (26%)

Query: 31  RFSSRSAVTAHTKAVHLGERP--FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
           +F++ ++  +H + +H  ERP   +C +CG +  S   L+EHL  H+D AP++CD+C K 
Sbjct: 344 KFTTNASAQSHAQYMHQEERPRPVICEQCGVAVHSLHALKEHLLSHTDYAPYECDVCKKC 403

Query: 89  SLKLSNVS-------------------------------------------CGWYPDESK 105
              +S +                                            CG     +K
Sbjct: 404 FKSVSRLKHHKETHDPHKYICPECGMQLNSRPTLNRHRLVHTDQMQHKCDYCGREFKRAK 463

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
            LKNH  LHTG +PY+C +C RTFANGSNCR+HK++ HPEEL   E++ G
Sbjct: 464 ALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGG 513

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194879352|ref|XP_001974223.1| GG21202 [Drosophila erecta] gi|190657410|gb|EDV54623.1| GG21202 [Drosophila erecta]

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 47/180 (26%)

Query: 22  KYSLALMVTRFSSRSAVTAHTKAVHLGERP--FVCHECGQSFASKGILQEHLTIHSDDAP 79
           +Y+ +    +F++ ++   H + +HL ERP   +C +CG    S   L+EH+  H+D AP
Sbjct: 308 QYACSSCDKKFATSASAQQHEQYMHLDERPRPVICEQCGVGVHSMSALKEHVLKHTDYAP 367

Query: 80  WKCDICSKKSLKLSN--------------------------------------------V 95
           ++C++C KK  K +N                                             
Sbjct: 368 FECEVC-KKCFKSANRLKHHKETHDPHKYICPECGMQLNSRTTLNRHRLVHTDQMQHKCD 426

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
            CG     +K LKNH  LHTG +PY+C +C RTFANGSNCR+HK++ HPEEL   E++ G
Sbjct: 427 YCGREFKRAKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGG 486

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194760481|ref|XP_001962468.1| GF14427 [Drosophila ananassae] gi|190616165|gb|EDV31689.1| GF14427 [Drosophila ananassae]

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 45/170 (26%)

Query: 31  RFSSRSAVTAHTKAVHLGERP--FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSK- 87
           +F+S ++   H++ +HL ERP   +C +CG    S   L+EH+  H+D AP++C+IC K 
Sbjct: 307 KFTSSASAQYHSQYMHLDERPRPVICEQCGVGVHSISALKEHVLKHTDYAPFECEICRKC 366

Query: 88  -KS----------------------LKLSNVS-------------------CGWYPDESK 105
            KS                      ++L++                     CG     +K
Sbjct: 367 FKSATRLKHHKETHDPHKYICPECGMQLNSRPTLNRHRLVHTDQMQHKCDYCGREFKRAK 426

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
            LKNH  LHTG +PY+C +C RTFANGSNCR+HK++ HPEEL   E++ G
Sbjct: 427 ALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKAHPEELAAQEAAGG 476

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
FB|FBgn0032814	607	CG10366 [Drosophila melanogast	0.614	0.168	0.417	5.2e-20
UNIPROTKB|F1NL13	333	F1NL13 "Uncharacterized protei	0.686	0.342	0.414	1.5e-19
UNIPROTKB|H9KZ43	371	H9KZ43 "Uncharacterized protei	0.680	0.304	0.370	7.2e-19
UNIPROTKB|H9L1N3	436	H9L1N3 "Uncharacterized protei	0.680	0.259	0.377	1.5e-18
UNIPROTKB|J9P857	927	J9P857 "Uncharacterized protei	0.795	0.142	0.368	1.7e-18
ZFIN|ZDB-GENE-110913-156	308	si:dkey-179k24.6 "si:dkey-179k	0.680	0.366	0.354	1.7e-18
UNIPROTKB|H9L099	407	ZNF599 "Uncharacterized protei	0.686	0.280	0.414	1.9e-18
UNIPROTKB|H9KZ11	494	LOC100857852 "Uncharacterized	0.692	0.232	0.356	2.8e-18
UNIPROTKB|Q4V348	819	ZNF658B "Zinc finger protein 6	0.746	0.151	0.375	2.9e-18
UNIPROTKB|J9NYQ6	717	ZNF677 "Uncharacterized protei	0.807	0.186	0.350	3e-18

FB|FBgn0032814 CG10366 [Drosophila melanogaster (taxid:7227)]

 Score = 246 (91.7 bits), Expect = 5.2e-20, P = 5.2e-20
 Identities = 48/115 (41%), Positives = 65/115 (56%)

Query:    41 HTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWY 100
             H K  H     ++C ECG    S+  L  H  +H+D    KCD C ++  +         
Sbjct:   409 HHKETH-DPHKYICPECGMQLNSRTTLNRHRLVHTDQMQHKCDYCGREFKR--------- 458

Query:   101 PDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
                +K LKNH  LHTG +PY+C +C RTFANGSNCR+HK++ HPEEL   E++ G
Sbjct:   459 ---AKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGG 510

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

UNIPROTKB|F1NL13 F1NL13 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 53/128 (41%), Positives = 68/128 (53%)

Query:    31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL 90
             RFSS S V  H + +H GERPF C ECG+SF S   L  H  IH+++ P++C  C K S 
Sbjct:   176 RFSSSSNVIIHQR-IHTGERPFKCPECGKSFKSSSTLINHQRIHTEERPFECSECGK-SF 233

Query:    91 KLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY 150
             K            S DL  H  +HTG +PY CP C ++F   S  + H+R +H EE    
Sbjct:   234 K-----------SSSDLIVHLRVHTGYKPYKCPECGKSFKRSSELKCHQR-IHTEERPFE 281

Query:   151 ESSLGKIF 158
              S  GK F
Sbjct:   282 CSECGKSF 289

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9KZ43 H9KZ43 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 229 (85.7 bits), Expect = 7.2e-19, P = 7.2e-19
 Identities = 47/127 (37%), Positives = 68/127 (53%)

Query:    32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
             F+S S +T H + +H GE+PF C ECG+ F +K  L+ H  IH+ + P+KC  C K    
Sbjct:   102 FNSSSHLTCHQR-IHKGEKPFQCSECGKGFKTKFELKLHQRIHTGERPYKCSECGKGFKS 160

Query:    92 LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
              SN++C            HH +HTG+RP+ CP C ++F   S  + H  R+H  +     
Sbjct:   161 NSNLTC------------HHRIHTGERPFQCPECGKSFKRSSELKQH-HRIHTGQRPFQC 207

Query:   152 SSLGKIF 158
             S  GK F
Sbjct:   208 SECGKSF 214

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9L1N3 H9L1N3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 229 (85.7 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 48/127 (37%), Positives = 68/127 (53%)

Query:    32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
             F+S S +T H + +H GE+PF C ECG+ F +K  L+ H  IH+ + P+KC  C K    
Sbjct:   104 FNSSSHLTCHQR-IHKGEKPFQCSECGKGFKTKFELKLHQRIHTGERPYKCSECGKGFKS 162

Query:    92 LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
              SN++C            HH +HTG+RP+ CP C ++F   S  + H  R+H  E     
Sbjct:   163 NSNLTC------------HHRIHTGERPFQCPECGKSFKRSSELKQH-HRIHTGERPFKC 209

Query:   152 SSLGKIF 158
             S  GK F
Sbjct:   210 SECGKGF 216

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9P857 J9P857 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 235 (87.8 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 56/152 (36%), Positives = 80/152 (52%)

Query:    32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
             F++ SA+  H + VH GERP+ C ECG+SF  +  L  HL +HS + P+KC+ C K SLK
Sbjct:   573 FTTSSALHYHHR-VHTGERPYECSECGKSFVRRNSLSVHLKVHSGEKPYKCNECGK-SLK 630

Query:    92 LSN-------VSCGWYPDESKD----------LKNHHNLHTGKRPYTCPWCSRTFANGSN 134
               +       +  G  P E  +          L++H  +HTG+RPY C  C ++F + S 
Sbjct:   631 CKSTFIQHQRIHTGERPYECSECGKSFSATSVLRSHQRVHTGERPYECNECQKSFTSSSA 690

Query:   135 CRSHKRRMHPEELKLYESSLGKIFLYGKMKNV 166
              RSH+R +H  E        GK FL+    NV
Sbjct:   691 LRSHQR-VHTGERPYKCDDCGKFFLHRNSLNV 721

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-156 si:dkey-179k24.6 "si:dkey-179k24.6" [Danio rerio (taxid:7955)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 45/127 (35%), Positives = 65/127 (51%)

Query:    32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
             FS  S +  H K +H GE+PF C +CG+SF+    L +H+ IH+ + P+ C  C K    
Sbjct:   159 FSLSSNLNKHMK-IHTGEKPFTCPQCGKSFSQSSHLNKHMRIHTGEKPFTCPQCGKSF-- 215

Query:    92 LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
                        +S  L  H  +HTG++PYTCP C ++F+  S    H R +H EE     
Sbjct:   216 ----------SQSSHLNKHMRIHTGEKPYTCPQCGKSFSQSSYLNKHMR-IHTEEKPFTS 264

Query:   152 SSLGKIF 158
             +  GK F
Sbjct:   265 NQCGKNF 271

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|H9L099 ZNF599 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 227 (85.0 bits), Expect = 1.9e-18, P = 1.9e-18
 Identities = 53/128 (41%), Positives = 66/128 (51%)

Query:    31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL 90
             RF  RS+   H + +H GERPF C ECG+SF S   L  H  IH+ + P+KC  CSK S 
Sbjct:   264 RFK-RSSHLIHHQRIHKGERPFQCSECGKSFRSSSNLTVHQRIHTGERPFKCSECSK-SF 321

Query:    91 KLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY 150
             K            S  L  H N+HTG+RPY CP C + F   S+   H+R +H EE    
Sbjct:   322 K-----------SSSHLIQHQNIHTGERPYKCPECGKGFKKSSHVTFHQR-IHTEERPYK 369

Query:   151 ESSLGKIF 158
                 GK F
Sbjct:   370 CPECGKSF 377

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9KZ11 LOC100857852 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 228 (85.3 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 46/129 (35%), Positives = 69/129 (53%)

Query:    32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
             F+S S +T H + +H GE+PF C ECG+ F +K  L+ H  IH+ + P+KC  C K    
Sbjct:   313 FNSSSHLTCHQR-IHKGEKPFQCSECGKGFKTKFELKLHQRIHTGERPYKCSECGKGFKS 371

Query:    92 LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
              SN++C            HH +HTG+RP+ CP C ++F   S  + H  R+H  +     
Sbjct:   372 NSNLTC------------HHRIHTGERPFQCPECGKSFKRSSELKQH-HRIHTGQRPFQC 418

Query:   152 SSLGKIFLY 160
                GK F++
Sbjct:   419 PECGKSFIW 427

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q4V348 ZNF658B "Zinc finger protein 658B" [Homo sapiens (taxid:9606)]

 Score = 232 (86.7 bits), Expect = 2.9e-18, P = 2.9e-18
 Identities = 54/144 (37%), Positives = 81/144 (56%)

Query:    32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK--- 88
             F+  SA+ AH + +H GE+P+ C+ECG+SFA   +L+ H  IH+ + P++C+ C +    
Sbjct:   371 FAHNSALRAHHR-IHTGEKPYECNECGRSFAHISVLKAHQRIHTREKPYECNECGRSFTY 429

Query:    89 --SLKL-SNVSCGWYPDESKD----------LKNHHNLHTGKRPYTCPWCSRTFANGSNC 135
               +L+    +  G  P E  D          LK H  +HTG++PY C  C +TFA+ S  
Sbjct:   430 NSALRAHQRIHTGRKPYECSDCEKTFAHNSALKIHQRIHTGEKPYKCNECEKTFAHNSAL 489

Query:   136 RSHKRRMHPEELKLYE-SSLGKIF 158
             R+H+  +H  E KLYE S  GK F
Sbjct:   490 RAHQN-IHTGE-KLYECSECGKTF 511

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|J9NYQ6 ZNF677 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 231 (86.4 bits), Expect = 3.0e-18, P = 3.0e-18
 Identities = 53/151 (35%), Positives = 81/151 (53%)

Query:    11 AAGFRNASTLGK-YSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQE 69
             +A +R A T GK Y        FS  S + +H + +H G+RP+ C+ECG++F  +  L +
Sbjct:   256 SAQYRRAYTRGKSYKCNNCGKAFSKSSNLMSHER-IHSGQRPYKCNECGKAFTERSHLTQ 314

Query:    70 HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTF 129
             H  IH+ + P+KC+ C K   + SN            L  HH +HTG++PY C  C +  
Sbjct:   315 HKKIHTGEKPYKCNECGKAFNQCSN------------LTRHHRVHTGEKPYKCNICGKVC 362

Query:   130 ANGSNCRSHKRRMHPEELKLYE-SSLGKIFL 159
             +  SN  +H+R MH  E K Y+ +  GK F+
Sbjct:   363 SQNSNLANHQR-MHTGE-KPYKCNECGKAFI 391

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
KOG2462|consensus	279		99.96
KOG2462|consensus	279		99.9
KOG3623|consensus	1007		99.84
KOG1074|consensus	958		99.83
KOG1074|consensus	958		99.72
KOG3623|consensus	1007		99.64
KOG3576|consensus	267		99.63
KOG3576|consensus	267		99.62
KOG3608|consensus	467		99.56
KOG3608|consensus	467		99.5
KOG3993|consensus	500		99.14
PLN03086	567	PRLI-interacting factor K; Provisional	99.08
PLN03086	567	PRLI-interacting factor K; Provisional	99.07
PHA00733	128	hypothetical protein	99.06
PHA00733	128	hypothetical protein	98.88
PHA02768	55	hypothetical protein; Provisional	98.86
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.82
PHA02768	55	hypothetical protein; Provisional	98.76
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.41
PHA00616	44	hypothetical protein	98.32
PHA00732	79	hypothetical protein	98.18
KOG3993|consensus	500		98.1
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.98
PHA00732	79	hypothetical protein	97.9
PHA00616	44	hypothetical protein	97.87
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.85
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.83
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.81
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.76
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.53
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.37
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.34
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.27
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.27
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.18
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.97
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.94
smart00355	26	ZnF_C2H2 zinc finger.	96.85
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.72
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.69
smart00355	26	ZnF_C2H2 zinc finger.	96.63
KOG2231|consensus	669		96.27
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.16
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.97
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.96
KOG2893|consensus	341		95.77
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.72
PRK04860	160	hypothetical protein; Provisional	95.61
PRK04860	160	hypothetical protein; Provisional	94.78
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.26
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.21
COG5048	467	FOG: Zn-finger [General function prediction only]	93.36
KOG1146|consensus	1406		92.96
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.84
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.81
KOG1146|consensus	1406		90.49
COG4049	65	Uncharacterized protein containing archaeal-type C	89.79
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.45
PF12907	40	zf-met2: Zinc-binding	89.1
COG4049	65	Uncharacterized protein containing archaeal-type C	88.18
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.07
KOG2893|consensus	341		86.46
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	86.45
KOG2785|consensus	390		85.58
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	84.92
COG5048	467	FOG: Zn-finger [General function prediction only]	84.59
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	83.45
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	81.73
COG1592	166	Rubrerythrin [Energy production and conversion]	81.45
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	81.25
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	80.45

>KOG2462|consensus

Probab=99.96  E-value=2.1e-30  Score=179.13  Aligned_cols=134  Identities=29%  Similarity=0.559  Sum_probs=119.2

Q ss_pred             cCCCCCccchhhhhhhcCChHHHHHHHHHhhcC---CCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCcccccc
Q psy16925         16 NASTLGKYSLALMVTRFSSRSAVTAHTKAVHLG---ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKL   92 (166)
Q Consensus        16 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~---~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~   92 (166)
                      +....+.|.|..|++.+.+.+.|.+|.+ .|-.   .+.+.|..|++.|..-..|..|+++|+  .+++|..||      
T Consensus       124 ~~~~~~r~~c~eCgk~ysT~snLsrHkQ-~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCG------  194 (279)
T KOG2462|consen  124 SAAKHPRYKCPECGKSYSTSSNLSRHKQ-THRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICG------  194 (279)
T ss_pred             ccccCCceeccccccccccccccchhhc-ccccccccccccCCCCCceeeehHHHhhHhhccC--CCccccccc------
Confidence            3445678999999999999999999988 5543   566999999999999999999999996  567777655      


Q ss_pred             ccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHHhhhhhhhhcccC
Q psy16925         93 SNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMKN  165 (166)
Q Consensus        93 ~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~f~~~~~~~  165 (166)
                            +.|...|.|+.|+|+|+|||||.|+.|+++|+.+++|+.|+++ |.+..+|.|..|+|.|.-..++|
T Consensus       195 ------KaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQT-HS~~K~~qC~~C~KsFsl~SyLn  260 (279)
T KOG2462|consen  195 ------KAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQT-HSDVKKHQCPRCGKSFALKSYLN  260 (279)
T ss_pred             ------ccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHh-hcCCccccCcchhhHHHHHHHHH
Confidence                  5568999999999999999999999999999999999999997 77777999999999999888776

>KOG2462|consensus

Probab=99.90  E-value=9.7e-25  Score=151.12  Aligned_cols=107  Identities=25%  Similarity=0.523  Sum_probs=98.9

Q ss_pred             CCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCC
Q psy16925         19 TLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCG   98 (166)
Q Consensus        19 ~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~   98 (166)
                      +...+.|++|++.+.+...|..|++ +|+  .+.+|.+||+.|...=.|+-|++.|+||+||.|+.|+            
T Consensus       158 s~ka~~C~~C~K~YvSmpALkMHir-TH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~------------  222 (279)
T KOG2462|consen  158 SKKAFSCKYCGKVYVSMPALKMHIR-THT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCG------------  222 (279)
T ss_pred             ccccccCCCCCceeeehHHHhhHhh-ccC--CCcccccccccccchHHhhcccccccCCCCccCCccc------------
Confidence            3667999999999999999999987 566  7899999999999999999999999999999998755            


Q ss_pred             CcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhh
Q psy16925         99 WYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus        99 ~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      ++|.+.++|+.|+++|.+.|+|+|..|+|+|+..+.|..|..
T Consensus       223 kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  223 KAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             chhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            556899999999999999999999999999999999999975

>KOG3623|consensus

Probab=99.84  E-value=6.3e-22  Score=152.13  Aligned_cols=68  Identities=26%  Similarity=0.422  Sum_probs=65.1

Q ss_pred             ccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHHhhhhhhhh
Q psy16925         93 SNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYG  161 (166)
Q Consensus        93 ~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~f~~~  161 (166)
                      .|+.|++.|.-.+.|.+|.--|+|.+||+|.+|.++|..+-.|..|+|. |.||.||.|..|||+|...
T Consensus       896 aCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRL-HSGEKPfQCdKClKRFSHS  963 (1007)
T KOG3623|consen  896 ACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRL-HSGEKPFQCDKCLKRFSHS  963 (1007)
T ss_pred             hHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhh-ccCCCcchhhhhhhhcccc
Confidence            7888999999999999999999999999999999999999999999996 9999999999999999764

>KOG1074|consensus

Probab=99.83  E-value=1.4e-21  Score=152.15  Aligned_cols=65  Identities=32%  Similarity=0.552  Sum_probs=57.1

Q ss_pred             CCcccCCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         12 AGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        12 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ....+.....+.+|.+|.+.|.+.+.|+.|++ .|++++||+|.+||..|.++.+|..|...|...
T Consensus       343 v~~~~~~~~~khkCr~CakvfgS~SaLqiHlR-SHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~  407 (958)
T KOG1074|consen  343 VEGPSEKPFFKHKCRFCAKVFGSDSALQIHLR-SHTGERPFQCNVCGNRFSTKGNLKVHFQRHREK  407 (958)
T ss_pred             cccCCccccccchhhhhHhhcCchhhhhhhhh-ccCCCCCeeecccccccccccceeeeeeecccc
Confidence            34455566778999999999999999999998 799999999999999999999999997766543

>KOG1074|consensus

Probab=99.72  E-value=2.3e-18  Score=134.40  Aligned_cols=69  Identities=35%  Similarity=0.727  Sum_probs=58.7

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCC----CCccCC---cCCccccc
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDD----APWKCD---ICSKKSLK   91 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~----~~~~c~---~C~~~~~~   91 (166)
                      .-.|-+|-+..+..+.|+.|++ .|++|+||+|.+||+.|.++.+|..|+-.|...    ..+.|+   .|.+.|..
T Consensus       605 PNqCiiC~rVlSC~saLqmHyr-tHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn  680 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYR-THTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTN  680 (958)
T ss_pred             ccceeeeeecccchhhhhhhhh-cccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccc
Confidence            3569999999999999999998 899999999999999999999999999888654    345666   66666644

>KOG3623|consensus

Probab=99.64  E-value=1.5e-16  Score=122.94  Aligned_cols=116  Identities=23%  Similarity=0.467  Sum_probs=98.8

Q ss_pred             cchhhhhhhcCChHHHHHHHHHhhcC-CCCeecccchhhcCChHHHHHHHhHcCCCCCc----cCCcCCccccccccccC
Q psy16925         23 YSLALMVTRFSSRSAVTAHTKAVHLG-ERPFVCHECGQSFASKGILQEHLTIHSDDAPW----KCDICSKKSLKLSNVSC   97 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~~~h~~-~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~----~c~~C~~~~~~~~c~~c   97 (166)
                      ..|++|...+.....|..|++..|.. +..|.|..|..+|.....|.+|+..|.+-..-    .-..+.+.   ..|.+|
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRK---FKCtEC  287 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRK---FKCTEC  287 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhcc---cccccc
Confidence            67999999999999999999877654 55599999999999999999999998653332    12223333   478899


Q ss_pred             CCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhh
Q psy16925         98 GWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus        98 ~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      +++|+-+..|+.|+|+|.|||||.|+-|++.|+..+++..|+..
T Consensus       288 gKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  288 GKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             chhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            99999999999999999999999999999999999999999863

>KOG3576|consensus

Probab=99.63  E-value=1.6e-16  Score=105.94  Aligned_cols=120  Identities=23%  Similarity=0.409  Sum_probs=100.5

Q ss_pred             cCCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccc
Q psy16925         16 NASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNV   95 (166)
Q Consensus        16 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~   95 (166)
                      .+.+...|.|.+|+++|.-.-.|.+|++ .|..-+.+.|..||+.|++...|.+|.++|+|-+||+|..|++.|.     
T Consensus       111 sssd~d~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaft-----  184 (267)
T KOG3576|consen  111 SSSDQDSFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFT-----  184 (267)
T ss_pred             CCCCCCeeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHH-----
Confidence            3444566999999999999999999997 7998899999999999999999999999999999999999887774     


Q ss_pred             cCCCcCCCchhHHHHhhhhcC-----------CCCcccCcccccccCChhhhhhhhhhcchhHH
Q psy16925         96 SCGWYPDESKDLKNHHNLHTG-----------KRPYTCPWCSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus        96 ~c~~~f~~~~~l~~H~~~h~~-----------~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                             ..-.|..|++.-++           ++-|.|..||..-.....+..|+..+|+..-.
T Consensus       185 -------qrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  185 -------QRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             -------hhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence                   44446677654332           45689999999988899999999998987633

>KOG3576|consensus

Probab=99.62  E-value=9.3e-17  Score=107.04  Aligned_cols=95  Identities=33%  Similarity=0.676  Sum_probs=82.2

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccccc
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRT  128 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~  128 (166)
                      ...+.|.+|++.|.-...|.+|+.-|..-+.+.|..||++|            .+.-+|+.|.|+|+|.+||+|..|+++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgf------------ndtfdlkrh~rthtgvrpykc~~c~ka  182 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGF------------NDTFDLKRHTRTHTGVRPYKCSLCEKA  182 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcc------------cchhhhhhhhccccCccccchhhhhHH
Confidence            44599999999999999999999999888888888877766            566779999999999999999999999


Q ss_pred             ccCChhhhhhhhhhcchhH----------HHHHHHhh
Q psy16925        129 FANGSNCRSHKRRMHPEEL----------KLYESSLG  155 (166)
Q Consensus       129 f~~~~~l~~H~~~~h~~~~----------~~~c~~c~  155 (166)
                      |.+..+|..|++.+|..+.          -|.|+.||
T Consensus       183 ftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg  219 (267)
T KOG3576|consen  183 FTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCG  219 (267)
T ss_pred             HHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccC
Confidence            9999999999998885432          23377776

>KOG3608|consensus

Probab=99.56  E-value=2e-15  Score=108.30  Aligned_cols=129  Identities=19%  Similarity=0.394  Sum_probs=105.1

Q ss_pred             ccchh--hhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcC--CCCCccCCcCCccccc------
Q psy16925         22 KYSLA--LMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHS--DDAPWKCDICSKKSLK------   91 (166)
Q Consensus        22 ~~~C~--~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~--~~~~~~c~~C~~~~~~------   91 (166)
                      .+.|.  .|.+.+.++..|..|++ .|++++...|+.||..|.+...|.+|++..+  ...+|.|..|.+.|.+      
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r-~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~  255 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIR-THSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKS  255 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHH-hcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHH
Confidence            35565  89999999999999998 8999999999999999999999999976644  4578999999888865      


Q ss_pred             --------cccccCCCcCCCchhHHHHhhh-hcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHH
Q psy16925         92 --------LSNVSCGWYPDESKDLKNHHNL-HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS  153 (166)
Q Consensus        92 --------~~c~~c~~~f~~~~~l~~H~~~-h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  153 (166)
                              ..|+.|.-.....+.|..|++. |..++||+|..|++.|.+.++|..|... |. +-.|.|+.
T Consensus       256 Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~-HS-~~~y~C~h  324 (467)
T KOG3608|consen  256 HVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV-HS-KTVYQCEH  324 (467)
T ss_pred             HHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh-cc-ccceecCC
Confidence                    3888888888888889888875 6678888888888888888888888763 54 32444444

>KOG3608|consensus

Probab=99.50  E-value=1.2e-14  Score=104.28  Aligned_cols=126  Identities=25%  Similarity=0.500  Sum_probs=79.8

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhH-cCCCCCccCCcCCccccccccccCCCc
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTI-HSDDAPWKCDICSKKSLKLSNVSCGWY  100 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~C~~~~~~~~c~~c~~~  100 (166)
                      .|.|..|-++|.++..|..|+. .|.+  -|+|+.|+.+....++|..|++. |..++||+|+.|...+           
T Consensus       237 ~fqC~~C~KrFaTeklL~~Hv~-rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c-----------  302 (467)
T KOG3608|consen  237 SFQCAQCFKRFATEKLLKSHVV-RHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRC-----------  302 (467)
T ss_pred             chHHHHHHHHHhHHHHHHHHHH-Hhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhh-----------
Confidence            4666666666666666666654 2332  35666777666666667666543 5666777776655544           


Q ss_pred             CCCchhHHHHhhhhcCCCCcccCc--ccccccCChhhhhhhhhhcch--hHHHHHHHhhhhhhhhcc
Q psy16925        101 PDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPE--ELKLYESSLGKIFLYGKM  163 (166)
Q Consensus       101 f~~~~~l~~H~~~h~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h~~--~~~~~c~~c~~~f~~~~~  163 (166)
                       .+.++|..|...|+ +..|.|..  |..+|.+..++.+|++.+|.|  +.+|.|--|.+.|...+.
T Consensus       303 -~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~  367 (467)
T KOG3608|consen  303 -VRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKS  367 (467)
T ss_pred             -ccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchh
Confidence             66667777776665 44567755  777777777777777766644  345556667776665543

>KOG3993|consensus

Probab=99.14  E-value=9.9e-12  Score=91.35  Aligned_cols=99  Identities=19%  Similarity=0.300  Sum_probs=71.1

Q ss_pred             cCCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCcc---------C----
Q psy16925         16 NASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWK---------C----   82 (166)
Q Consensus        16 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~---------c----   82 (166)
                      ..+.+|.|+|+.|...|.+...|.+|. ......-.|+|+.|++.|+...+|..|.++|.....--         -    
T Consensus       261 i~n~iGdyiCqLCK~kYeD~F~LAQHr-C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~r  339 (500)
T KOG3993|consen  261 IPNVIGDYICQLCKEKYEDAFALAQHR-CPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETR  339 (500)
T ss_pred             CcccHHHHHHHHHHHhhhhHHHHhhcc-CCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhh
Confidence            345678899999999999999999995 35566677999999999999999999999996422100         0    


Q ss_pred             ------CcCC--ccccccccccCCCcCCCchhHHHHhhhhc
Q psy16925         83 ------DICS--KKSLKLSNVSCGWYPDESKDLKNHHNLHT  115 (166)
Q Consensus        83 ------~~C~--~~~~~~~c~~c~~~f~~~~~l~~H~~~h~  115 (166)
                            ..-|  ..-....|..|++.|.....|+.|+.+|.
T Consensus       340 ae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  340 AEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence                  0000  01112367777777777777777766554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.08  E-value=2.9e-10  Score=88.17  Aligned_cols=117  Identities=17%  Similarity=0.319  Sum_probs=73.3

Q ss_pred             CCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCcccccccccc
Q psy16925         17 ASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVS   96 (166)
Q Consensus        17 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~   96 (166)
                      .....-+.|+.|++.|. ...|..|... +.  .++.|+ |+..+ ....|..|+..|.+.+++.|..|+..+.....  
T Consensus       448 ~el~~H~~C~~Cgk~f~-~s~LekH~~~-~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~--  519 (567)
T PLN03086        448 EEAKNHVHCEKCGQAFQ-QGEMEKHMKV-FH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGS--  519 (567)
T ss_pred             cccccCccCCCCCCccc-hHHHHHHHHh-cC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCcc--
Confidence            33344467888888775 5677888763 42  677787 87644 55777778777777888888877765521000  


Q ss_pred             CCCcC-CCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcc
Q psy16925         97 CGWYP-DESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus        97 c~~~f-~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                       ...+ ...+.|..|.... +.+++.|..||+.+..+ .+..|+..+|.
T Consensus       520 -~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        520 -AMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             -ccchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence             0000 0234577777664 77778888888777655 35677766553

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.07  E-value=4.5e-11  Score=92.57  Aligned_cols=124  Identities=17%  Similarity=0.326  Sum_probs=92.8

Q ss_pred             CCccchhhhhhhcCChHHHHHHHHHhhcC------------------CCCeecccchhhcCChHHHHHHHhHcCCCCCcc
Q psy16925         20 LGKYSLALMVTRFSSRSAVTAHTKAVHLG------------------ERPFVCHECGQSFASKGILQEHLTIHSDDAPWK   81 (166)
Q Consensus        20 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~------------------~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~   81 (166)
                      .....|..|... .....|..|....-..                  +..+.|+.|++.|. ...|..|+..++  .++.
T Consensus       405 ~~~V~C~NC~~~-i~l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~  480 (567)
T PLN03086        405 VDTVECRNCKHY-IPSRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQ  480 (567)
T ss_pred             CCeEECCCCCCc-cchhHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCCCCccc-hHHHHHHHHhcC--CCcc
Confidence            445679999885 5556666886522111                  24467889999885 577889988764  6778


Q ss_pred             CCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccC----------ChhhhhhhhhhcchhHHHHH
Q psy16925         82 CDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFAN----------GSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus        82 c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~----------~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+ |+..+             ....|..|+.+|..++|+.|+.|++.|..          .+.|..|...  -|.+++.|
T Consensus       481 Cp-Cg~~~-------------~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~--CG~rt~~C  544 (567)
T PLN03086        481 CP-CGVVL-------------EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI--CGSRTAPC  544 (567)
T ss_pred             CC-CCCCc-------------chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh--cCCcceEc
Confidence            87 76432             45789999999999999999999999852          3478899886  37789999


Q ss_pred             HHhhhhhhhhcc
Q psy16925        152 SSLGKIFLYGKM  163 (166)
Q Consensus       152 ~~c~~~f~~~~~  163 (166)
                      ..||+.|.-+-|
T Consensus       545 ~~Cgk~Vrlrdm  556 (567)
T PLN03086        545 DSCGRSVMLKEM  556 (567)
T ss_pred             cccCCeeeehhH
Confidence            999998876554

>PHA00733 hypothetical protein

Probab=99.06  E-value=1.8e-10  Score=73.69  Aligned_cols=83  Identities=20%  Similarity=0.384  Sum_probs=62.3

Q ss_pred             CCCCeecccchhhcCChHHHHHH--HhH---cCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCccc
Q psy16925         48 GERPFVCHECGQSFASKGILQEH--LTI---HSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC  122 (166)
Q Consensus        48 ~~~~~~C~~C~~~f~~~~~l~~h--~~~---h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C  122 (166)
                      ..+++.|.+|...|.....|..+  ...   +.+++||.|+.|++.            |...+.|..|++.+  +.+|.|
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~------------Fss~s~L~~H~r~h--~~~~~C  102 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMP------------FSSSVSLKQHIRYT--EHSKVC  102 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCc------------CCCHHHHHHHHhcC--CcCccC
Confidence            45678888888888877766655  222   234677888775554            47888888998865  457999


Q ss_pred             CcccccccCChhhhhhhhhhcc
Q psy16925        123 PWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       123 ~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      +.|++.|.....|..|+...|.
T Consensus       103 ~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        103 PVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCHHHHHHHHHHhcC
Confidence            9999999999999999887663

>PHA00733 hypothetical protein

Probab=98.88  E-value=5.1e-09  Score=66.99  Aligned_cols=83  Identities=16%  Similarity=0.233  Sum_probs=63.1

Q ss_pred             CCccchhhhhhhcCChHHHHHH--HH--HhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccc
Q psy16925         20 LGKYSLALMVTRFSSRSAVTAH--TK--AVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNV   95 (166)
Q Consensus        20 ~~~~~C~~C~~~~~~~~~l~~H--~~--~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~   95 (166)
                      .+.+.|.+|...+.....|..+  +.  ..+.+.+||.|..|++.|.....|..|++.+  +.++.|..|+         
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~Cg---------  106 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCG---------  106 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCC---------
Confidence            4568999999988887766665  11  1234578999999999999999999999876  3456776655         


Q ss_pred             cCCCcCCCchhHHHHhhhhcC
Q psy16925         96 SCGWYPDESKDLKNHHNLHTG  116 (166)
Q Consensus        96 ~c~~~f~~~~~l~~H~~~h~~  116 (166)
                         +.|.....|..|+...++
T Consensus       107 ---K~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        107 ---KEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             ---CccCCHHHHHHHHHHhcC
Confidence               555788889999876543

>PHA02768 hypothetical protein; Provisional

Probab=98.86  E-value=1.5e-09  Score=58.00  Aligned_cols=42  Identities=17%  Similarity=0.155  Sum_probs=29.0

Q ss_pred             ccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhh
Q psy16925         93 SNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCR  136 (166)
Q Consensus        93 ~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~  136 (166)
                      .|+.||+.|...+.|..|+++|+  +|++|..|++.|...+.|.
T Consensus         7 ~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          7 ECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             CcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            45556666677777777777776  5677777777777666653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.82  E-value=2.5e-09  Score=49.03  Aligned_cols=26  Identities=46%  Similarity=1.262  Sum_probs=21.6

Q ss_pred             hHHHHhhhhcCCCCcccCcccccccC
Q psy16925        106 DLKNHHNLHTGKRPYTCPWCSRTFAN  131 (166)
Q Consensus       106 ~l~~H~~~h~~~~p~~C~~C~~~f~~  131 (166)
                      +|..|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            36788888999999999999988863

...

>PHA02768 hypothetical protein; Provisional

Probab=98.76  E-value=3.8e-09  Score=56.49  Aligned_cols=43  Identities=14%  Similarity=0.232  Sum_probs=31.4

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHH
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGIL   67 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l   67 (166)
                      .|.|++|++.|+..+.|..|++ .|+  ++++|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r-~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLR-KHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHH-hcC--CcccCCcccceeccccee
Confidence            4778888888888888888876 466  577777777777766554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.41  E-value=2.1e-07  Score=42.56  Aligned_cols=24  Identities=42%  Similarity=1.045  Sum_probs=14.9

Q ss_pred             HHHHHHHhhcCCCCeecccchhhcC
Q psy16925         38 VTAHTKAVHLGERPFVCHECGQSFA   62 (166)
Q Consensus        38 l~~H~~~~h~~~~~~~C~~C~~~f~   62 (166)
                      |..|++ .|++++||.|+.|++.|.
T Consensus         2 l~~H~~-~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMR-THTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHH-HHSSSSSEEESSSSEEES
T ss_pred             HHHHhh-hcCCCCCCCCCCCcCeeC
Confidence            556665 566666666666666654

...

>PHA00616 hypothetical protein

Probab=98.32  E-value=3.8e-07  Score=46.50  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=19.0

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      ||.|+.||+.|.+.++|..|++.|++++++.++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            355566666666666666665555555555543

>PHA00732 hypothetical protein

Probab=98.18  E-value=4e-07  Score=53.15  Aligned_cols=42  Identities=26%  Similarity=0.469  Sum_probs=32.1

Q ss_pred             cccCCCcCCCchhHHHHhhh-hcCCCCcccCcccccccCChhhhhhhhh
Q psy16925         94 NVSCGWYPDESKDLKNHHNL-HTGKRPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus        94 c~~c~~~f~~~~~l~~H~~~-h~~~~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      |..|++.|.....|..|++. |.   ++.|+.|++.|.   .+..|.+.
T Consensus         4 C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          4 CPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            55677777889999999874 54   368999999998   46778754

>KOG3993|consensus

Probab=98.10  E-value=5e-07  Score=67.15  Aligned_cols=83  Identities=18%  Similarity=0.447  Sum_probs=61.7

Q ss_pred             eecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhc----------------
Q psy16925         52 FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHT----------------  115 (166)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~----------------  115 (166)
                      |.|+.|...|.+...|.+|.-.......|+|+.|++.|            .-..+|..|.|=|.                
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVF------------sCPANLASHRRWHKPR~eaa~a~~~P~k~~  335 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVF------------SCPANLASHRRWHKPRPEAAKAGSPPPKQA  335 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccc------------cCchhhhhhhcccCCchhhhhcCCCChhhh
Confidence            89999999999999999985444444567777766665            44555555554332                


Q ss_pred             -----------------CCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        116 -----------------GKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       116 -----------------~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                                       .+.-|.|..|++.|.+...|+.|+..||..+
T Consensus       336 ~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  336 VETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             hhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence                             1224899999999999999999998877654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.98  E-value=1.2e-05  Score=43.60  Aligned_cols=50  Identities=22%  Similarity=0.326  Sum_probs=38.2

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCC-CCeecccchhhcCChHHHHHHHhHc
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGE-RPFVCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~-~~~~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      .|.|++|++ --+...|..|....|..+ +.+.|++|...+.  .+|..|+..+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            478999999 566788999988778765 4688999988654  3788887654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=97.90  E-value=5.2e-06  Score=48.47  Aligned_cols=43  Identities=19%  Similarity=0.336  Sum_probs=22.3

Q ss_pred             cchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHH
Q psy16925         23 YSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHL   71 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~   71 (166)
                      |.|..|++.|.+...|..|++..|.   ++.|+.|++.|.   .+..|+
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~   44 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHF   44 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhh
Confidence            4556666666666666665542233   234555555554   344444

>PHA00616 hypothetical protein

Probab=97.87  E-value=1.1e-05  Score=41.16  Aligned_cols=34  Identities=12%  Similarity=0.029  Sum_probs=30.2

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeeccc
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHE   56 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~   56 (166)
                      .|.|..|++.|..+.+|..|++ .|++++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r-~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLL-SVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHH-HhcCCCccceeE
Confidence            3789999999999999999997 688889988764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.85  E-value=5.3e-06  Score=36.59  Aligned_cols=22  Identities=45%  Similarity=1.062  Sum_probs=18.5

Q ss_pred             cccCcccccccCChhhhhhhhh
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5788888888888888888875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.83  E-value=6.7e-06  Score=37.80  Aligned_cols=26  Identities=38%  Similarity=0.739  Sum_probs=22.3

Q ss_pred             CcccCcccccccCChhhhhhhhhhcc
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      ||.|..|++.|.....|..|++.++.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58899999999999999999887654

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.81  E-value=7.9e-06  Score=36.23  Aligned_cols=24  Identities=38%  Similarity=0.902  Sum_probs=18.2

Q ss_pred             cccCcccccccCChhhhhhhhhhc
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      |.|+.|++.|.....|..|++.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578888888888888888888765

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.76  E-value=1.9e-05  Score=34.77  Aligned_cols=20  Identities=45%  Similarity=0.889  Sum_probs=9.9

Q ss_pred             ecccchhhcCChHHHHHHHh
Q psy16925         53 VCHECGQSFASKGILQEHLT   72 (166)
Q Consensus        53 ~C~~C~~~f~~~~~l~~h~~   72 (166)
                      .|+.|++.|.....|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHh
Confidence            44455555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.53  E-value=0.00015  Score=39.18  Aligned_cols=47  Identities=26%  Similarity=0.408  Sum_probs=32.1

Q ss_pred             cccCCCcCCCchhHHHHhhh-hcCC-CCcccCcccccccCChhhhhhhhhhc
Q psy16925         94 NVSCGWYPDESKDLKNHHNL-HTGK-RPYTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus        94 c~~c~~~f~~~~~l~~H~~~-h~~~-~p~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      ||.|++ -.+...|..|... |..+ +.+.||+|...+.  .+|..|+...|
T Consensus         5 CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    5 CPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            344444 2456779999765 4443 4689999988654  48889988766

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.37  E-value=9.6e-05  Score=53.44  Aligned_cols=44  Identities=23%  Similarity=0.500  Sum_probs=30.5

Q ss_pred             CCCcCCCchhHHHHhhhhc-------------------CCCCcccCcccccccCChhhhhhhh
Q psy16925         97 CGWYPDESKDLKNHHNLHT-------------------GKRPYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus        97 c~~~f~~~~~l~~H~~~h~-------------------~~~p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      |++.+++...|+-|+..-+                   ..|||+|++|++.|.....|..|..
T Consensus       357 C~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         357 CNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             chhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            6666666666666543211                   3578889889988888888888865

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.34  E-value=0.0002  Score=43.52  Aligned_cols=74  Identities=18%  Similarity=0.192  Sum_probs=16.1

Q ss_pred             chhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCC
Q psy16925         24 SLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDE  103 (166)
Q Consensus        24 ~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~  103 (166)
                      .|..|+..|.+...|..|+...|.-..+     ....+.....+....+.. ....+.|..            |++.|.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~-~~~~~~C~~------------C~~~f~s   62 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKK-VKESFRCPY------------CNKTFRS   62 (100)
T ss_dssp             ------------------------------------------------------SSEEBSS------------SS-EESS
T ss_pred             Cccccccccccccccccccccccccccc-----cccccccccccccccccc-cCCCCCCCc------------cCCCCcC
Confidence            4899999999999999999877764433     111111222233222211 112455555            4444578


Q ss_pred             chhHHHHhhhhc
Q psy16925        104 SKDLKNHHNLHT  115 (166)
Q Consensus       104 ~~~l~~H~~~h~  115 (166)
                      ...|..|++.+.
T Consensus        63 ~~~l~~Hm~~~~   74 (100)
T PF12756_consen   63 REALQEHMRSKH   74 (100)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHcCcc
Confidence            888888888653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.27  E-value=0.00015  Score=31.84  Aligned_cols=20  Identities=20%  Similarity=0.350  Sum_probs=9.3

Q ss_pred             chhhhhhhcCChHHHHHHHH
Q psy16925         24 SLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        24 ~C~~C~~~~~~~~~l~~H~~   43 (166)
                      .|++|+..|.+...|..|+.
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~   21 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMR   21 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHH
Confidence            45555555555555555544

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.27  E-value=0.00019  Score=32.79  Aligned_cols=24  Identities=50%  Similarity=1.028  Sum_probs=13.3

Q ss_pred             CeecccchhhcCChHHHHHHHhHc
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      ||.|..|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            355555555555555555555443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.18  E-value=9.5e-05  Score=53.49  Aligned_cols=49  Identities=18%  Similarity=0.343  Sum_probs=40.3

Q ss_pred             CCCCcccCc--ccccccCChhhhhhhhhhc------------------chhHHHHHHHhhhhhhhhccc
Q psy16925        116 GKRPYTCPW--CSRTFANGSNCRSHKRRMH------------------PEELKLYESSLGKIFLYGKMK  164 (166)
Q Consensus       116 ~~~p~~C~~--C~~~f~~~~~l~~H~~~~h------------------~~~~~~~c~~c~~~f~~~~~~  164 (166)
                      +++||+|++  |.+.|.....|..|+...|                  .++.||.|+.|+|+++.-+++
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGL  414 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGL  414 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccc
Confidence            369999977  9999999999999988666                  233799999999999765543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.97  E-value=0.00036  Score=42.41  Aligned_cols=73  Identities=23%  Similarity=0.368  Sum_probs=21.6

Q ss_pred             ecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCC
Q psy16925         53 VCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANG  132 (166)
Q Consensus        53 ~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~  132 (166)
                      .|..|+..|.....|..|+....+-..-....                +.....+..+++. ....++.|..|++.|...
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~----------------l~~~~~~~~~~~~-~~~~~~~C~~C~~~f~s~   63 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKY----------------LVDPNRLLNYLRK-KVKESFRCPYCNKTFRSR   63 (100)
T ss_dssp             -----------------------------------------------------------------SSEEBSSSS-EESSH
T ss_pred             Cccccccccccccccccccccccccccccccc----------------ccccccccccccc-ccCCCCCCCccCCCCcCH
Confidence            48899999999999999987665432110000                0122223333322 122369999999999999


Q ss_pred             hhhhhhhhhh
Q psy16925        133 SNCRSHKRRM  142 (166)
Q Consensus       133 ~~l~~H~~~~  142 (166)
                      ..|..|++.+
T Consensus        64 ~~l~~Hm~~~   73 (100)
T PF12756_consen   64 EALQEHMRSK   73 (100)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHcCc
Confidence            9999999854

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.94  E-value=0.00045  Score=36.16  Aligned_cols=41  Identities=29%  Similarity=0.483  Sum_probs=23.3

Q ss_pred             HHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCC
Q psy16925         39 TAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAP   79 (166)
Q Consensus        39 ~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   79 (166)
                      ..+.+.....+.|.+|++|+..+.+..+|.+|+....+.+|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            33444345567788899999999999999999877655554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.85  E-value=0.00059  Score=30.38  Aligned_cols=22  Identities=36%  Similarity=0.845  Sum_probs=18.7

Q ss_pred             cccCcccccccCChhhhhhhhh
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      |.|+.|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            5788899999999999998874

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.72  E-value=0.0006  Score=35.67  Aligned_cols=31  Identities=29%  Similarity=0.537  Sum_probs=21.9

Q ss_pred             hcCCCCcccCcccccccCChhhhhhhhhhcc
Q psy16925        114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       114 h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      ...+.|-.||+|+..+....+|++|+...|.
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            3457789999999999999999999987674

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.69  E-value=0.00057  Score=30.26  Aligned_cols=24  Identities=46%  Similarity=0.944  Sum_probs=17.2

Q ss_pred             cccCcccccccCChhhhhhhhhhcc
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      |+|+.|+.... ...|..|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57888888877 7788888887663

>smart00355 ZnF_C2H2 zinc finger

Probab=96.63  E-value=0.0019  Score=28.63  Aligned_cols=21  Identities=48%  Similarity=0.941  Sum_probs=10.4

Q ss_pred             ecccchhhcCChHHHHHHHhH
Q psy16925         53 VCHECGQSFASKGILQEHLTI   73 (166)
Q Consensus        53 ~C~~C~~~f~~~~~l~~h~~~   73 (166)
                      .|..|++.|.....|..|++.
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHH
Confidence            344555555555555555443

>KOG2231|consensus

Probab=96.27  E-value=0.0099  Score=47.86  Aligned_cols=105  Identities=17%  Similarity=0.234  Sum_probs=66.2

Q ss_pred             chhhhhhhcCChHHHHHHHHHhhcCCCCeecccch---------hhcCChHHHHHHHhHcCCCCCccCCcCCccccc-cc
Q psy16925         24 SLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECG---------QSFASKGILQEHLTIHSDDAPWKCDICSKKSLK-LS   93 (166)
Q Consensus        24 ~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~---------~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~-~~   93 (166)
                      .|..| -.|.+...|..|+...|..   +.|.+|-         ...-+...|..|++.-..        +.+.+.. ..
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~--------d~~s~rGhp~  184 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDP--------DDESCRGHPL  184 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCC--------ccccccCCcc
Confidence            45555 4556888999998755542   3333333         222334566666553221        3333433 56


Q ss_pred             cccCCCcCCCchhHHHHhhhhcCCCCcccCcc------cccccCChhhhhhhhhhcc
Q psy16925         94 NVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC------SRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus        94 c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C------~~~f~~~~~l~~H~~~~h~  144 (166)
                      |..|...|.....+..|++.++    |.|..|      +..|.....|..|.+..|.
T Consensus       185 C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  185 CKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             chhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcCc
Confidence            7778888888888999988654    455555      3457788889999888774

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.16  E-value=0.0021  Score=28.62  Aligned_cols=22  Identities=27%  Similarity=0.766  Sum_probs=17.6

Q ss_pred             cccCcccccccCChhhhhhhhh
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      |.|..|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4688888888888888888763

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.97  E-value=0.003  Score=28.09  Aligned_cols=21  Identities=19%  Similarity=0.376  Sum_probs=11.9

Q ss_pred             cchhhhhhhcCChHHHHHHHH
Q psy16925         23 YSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      |.|.+|...|.+...+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555556666655555554

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.96  E-value=0.0037  Score=28.47  Aligned_cols=22  Identities=18%  Similarity=0.629  Sum_probs=19.3

Q ss_pred             cccCcccccccCChhhhhhhhh
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999863

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2893|consensus

Probab=95.77  E-value=0.0044  Score=43.33  Aligned_cols=52  Identities=21%  Similarity=0.382  Sum_probs=41.0

Q ss_pred             cccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhH
Q psy16925         92 LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL  147 (166)
Q Consensus        92 ~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~  147 (166)
                      ..|..|++.|.+...|++|++    .+.|+|.+|.+..-+...|..|-..+|.+.+
T Consensus        11 pwcwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvhketi   62 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVHKETI   62 (341)
T ss_pred             ceeeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhhhhhh
Confidence            356778999999999999876    3459999999887778888888766776543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.72  E-value=0.0064  Score=26.74  Aligned_cols=20  Identities=25%  Similarity=0.245  Sum_probs=9.3

Q ss_pred             cchhhhhhhcCChHHHHHHHH
Q psy16925         23 YSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      |.|+.|+.... ...|..|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~   20 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLK   20 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHH
Confidence            34555555544 555555554

>PRK04860 hypothetical protein; Provisional

Probab=95.61  E-value=0.0093  Score=39.72  Aligned_cols=29  Identities=21%  Similarity=0.517  Sum_probs=24.2

Q ss_pred             hhHHHHhhhhcCCCCcccCcccccccCCh
Q psy16925        105 KDLKNHHNLHTGKRPYTCPWCSRTFANGS  133 (166)
Q Consensus       105 ~~l~~H~~~h~~~~p~~C~~C~~~f~~~~  133 (166)
                      ..+..|.++++++++|.|..|+..|....
T Consensus       129 ~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        129 LTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             CHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            35788999999999999999998887554

>PRK04860 hypothetical protein; Provisional

Probab=94.78  E-value=0.011  Score=39.41  Aligned_cols=37  Identities=19%  Similarity=0.608  Sum_probs=26.4

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCcccc
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL   90 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~   90 (166)
                      -+|.|. |+.   ....+.+|.++|+++++|.|..|+..+.
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            357776 776   5566777777888878888877776653

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.26  E-value=0.028  Score=25.07  Aligned_cols=20  Identities=35%  Similarity=0.865  Sum_probs=13.2

Q ss_pred             cccCcccccccCChhhhhhhh
Q psy16925        120 YTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      ..|+.||+.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4677777777 4555666654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.21  E-value=0.027  Score=27.08  Aligned_cols=22  Identities=27%  Similarity=0.353  Sum_probs=13.6

Q ss_pred             ccchhhhhhhcCChHHHHHHHH
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      .|.|++|...|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4566666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.36  E-value=0.0089  Score=45.65  Aligned_cols=130  Identities=28%  Similarity=0.390  Sum_probs=89.5

Q ss_pred             CccchhhhhhhcCChHHHHHHHHH-hhcCC--CCeecc--cchhhcCChHHHHHHHhHcCCCCCccCCc--CCcccccc-
Q psy16925         21 GKYSLALMVTRFSSRSAVTAHTKA-VHLGE--RPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDI--CSKKSLKL-   92 (166)
Q Consensus        21 ~~~~C~~C~~~~~~~~~l~~H~~~-~h~~~--~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~~~~-   92 (166)
                      ..+.|..|...|+....+..|... .|..+  +++.|+  .|++.|.....+..|...|....+..+..  +...+... 
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            368899999999999999999875 68999  999999  79999999999999988888766554432  22222111 


Q ss_pred             ----------------------ccccCCCcCCCchhHHHHhhhhcCCC--CcccCcccccccCChhhhhhhhhhcchhHH
Q psy16925         93 ----------------------SNVSCGWYPDESKDLKNHHNLHTGKR--PYTCPWCSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus        93 ----------------------~c~~c~~~f~~~~~l~~H~~~h~~~~--p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                                            .-..|...+.....+..|...+....  .+.+..|...|.....+..|++. |....+
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  446 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKI-HTNHAP  446 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccc-cccCCc
Confidence                                  11124444445555555555555444  35668888888888888888775 433334


Q ss_pred             HHH
Q psy16925        149 LYE  151 (166)
Q Consensus       149 ~~c  151 (166)
                      ..+
T Consensus       447 ~~~  449 (467)
T COG5048         447 LLC  449 (467)
T ss_pred             eee
Confidence            333

>KOG1146|consensus

Probab=92.96  E-value=0.023  Score=48.81  Aligned_cols=104  Identities=15%  Similarity=0.283  Sum_probs=69.0

Q ss_pred             cchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCC
Q psy16925         23 YSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPD  102 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~  102 (166)
                      -.|.-+.-.+.....+..|+...++..+.++|+.|++.|.....|..|++.-+.+-.-  ..|..+-             
T Consensus       437 ~e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~~gq-------------  501 (1406)
T KOG1146|consen  437 VELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCKAGQ-------------  501 (1406)
T ss_pred             ccccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch--hHhHhcc-------------
Confidence            3455566677777777777776777788899999999999999999998874433211  2221100             


Q ss_pred             CchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhh
Q psy16925        103 ESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       103 ~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      +.-.+..-...-.+.+||.|..|..++....+|..|+..
T Consensus       502 ~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  502 NHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            000000001112346789999999999999999999873

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.84  E-value=0.28  Score=30.55  Aligned_cols=91  Identities=13%  Similarity=0.114  Sum_probs=50.0

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccccc
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRT  128 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~  128 (166)
                      +.|..|+.|+-+.-...+|.+....--+-.+|.=....+...+..|-.|...|........  ..-.....|+|+.|...
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~~   90 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKNV   90 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCcccccc--cccccccceeCCCCCCc
Confidence            4566788888777777777654322222233321111122222345566666654321100  00122346999999999


Q ss_pred             ccCChhhhhhhhh
Q psy16925        129 FANGSNCRSHKRR  141 (166)
Q Consensus       129 f~~~~~l~~H~~~  141 (166)
                      |-...+.-.|...
T Consensus        91 FC~dCD~fiHe~L  103 (112)
T TIGR00622        91 FCVDCDVFVHESL  103 (112)
T ss_pred             cccccchhhhhhc
Confidence            9988888888765

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.81  E-value=0.054  Score=26.00  Aligned_cols=22  Identities=23%  Similarity=0.620  Sum_probs=19.1

Q ss_pred             CcccCcccccccCChhhhhhhh
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5789999999998888888876

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=90.49  E-value=0.053  Score=46.80  Aligned_cols=96  Identities=11%  Similarity=0.124  Sum_probs=60.9

Q ss_pred             CCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCC
Q psy16925         19 TLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCG   98 (166)
Q Consensus        19 ~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~   98 (166)
                      ..|.+.|..|++.+.....+. ++-    ...+|.|..|...|..+..|..|++.-        ..              
T Consensus      1257 ~sGe~~c~~~~~~~~~~~~~~-~l~----~~~~~~~~~~~~~~~~~~~l~~~~~k~--------~~-------------- 1309 (1406)
T KOG1146|consen 1257 ASGEGECGAVDELLTPSFGIS-TLD----VTHRYLCRQCKMAFDGEAPLTAHQRKF--------CF-------------- 1309 (1406)
T ss_pred             CCCcchhhhccccccCcccee-ecc----cchhHHHHHHHhhhcchhHHHHHHHHH--------Hh--------------
Confidence            357789999999888888776 543    355688999999999999998887321        00              


Q ss_pred             CcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhc
Q psy16925         99 WYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus        99 ~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                       .+........+.-.+..-.+| |..|...|+....|+.|++..+
T Consensus      1310 -~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~~ 1352 (1406)
T KOG1146|consen 1310 -AGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSSA 1352 (1406)
T ss_pred             -ccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHhh
Confidence             001111122222223334445 7777777777777777776443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.79  E-value=0.11  Score=27.73  Aligned_cols=30  Identities=23%  Similarity=0.556  Sum_probs=23.2

Q ss_pred             hcCCCCcccCcccccccCChhhhhhhhhhc
Q psy16925        114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus       114 h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      -.||.-+.||.|+..|...-+..+|....|
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            345666889999999988888888876555

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.45  E-value=0.27  Score=23.42  Aligned_cols=11  Identities=36%  Similarity=1.102  Sum_probs=6.2

Q ss_pred             eecccchhhcC
Q psy16925         52 FVCHECGQSFA   62 (166)
Q Consensus        52 ~~C~~C~~~f~   62 (166)
                      +.|..||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            45666665543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12907 zf-met2: Zinc-binding

Probab=89.10  E-value=0.4  Score=24.01  Aligned_cols=29  Identities=7%  Similarity=0.060  Sum_probs=19.7

Q ss_pred             cchhhhhh---hcCChHHHHHHHHHhhcCCCC
Q psy16925         23 YSLALMVT---RFSSRSAVTAHTKAVHLGERP   51 (166)
Q Consensus        23 ~~C~~C~~---~~~~~~~l~~H~~~~h~~~~~   51 (166)
                      +.|.+|..   ...+...|..|..+.|....+
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~   33 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTF   33 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCH
Confidence            67888884   445556788888766665433

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.18  E-value=0.34  Score=25.94  Aligned_cols=25  Identities=16%  Similarity=0.103  Sum_probs=14.6

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhh
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVH   46 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h   46 (166)
                      -+.|+-|+..|....++.+|+...|
T Consensus        17 ~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          17 FLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eeeCCchhHHHHHhHHHHHHhhHHh
Confidence            3556666666666666666655443

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.07  E-value=0.38  Score=29.87  Aligned_cols=15  Identities=33%  Similarity=0.875  Sum_probs=11.7

Q ss_pred             CCcccCcccccccCC
Q psy16925        118 RPYTCPWCSRTFANG  132 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~  132 (166)
                      .|..||.||..|...
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            577888888888766

The function of members of this family is unknown.

>KOG2893|consensus

Probab=86.46  E-value=0.23  Score=35.06  Aligned_cols=49  Identities=27%  Similarity=0.387  Sum_probs=36.6

Q ss_pred             CccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHH-HhHc
Q psy16925         21 GKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEH-LTIH   74 (166)
Q Consensus        21 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h-~~~h   74 (166)
                      .+-+|=+|...|.+...|..|.++     +-|+|.+|.+...+.-.|..| ++.|
T Consensus         9 ~kpwcwycnrefddekiliqhqka-----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen    9 DKPWCWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             CCceeeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceeehhhhh
Confidence            456788999999999999888663     457899998877766666666 3444

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=86.45  E-value=0.64  Score=20.88  Aligned_cols=11  Identities=36%  Similarity=0.942  Sum_probs=6.7

Q ss_pred             cccCccccccc
Q psy16925        120 YTCPWCSRTFA  130 (166)
Q Consensus       120 ~~C~~C~~~f~  130 (166)
                      -.|+.||..|.
T Consensus        15 ~~Cp~CG~~F~   25 (26)
T PF10571_consen   15 KFCPHCGYDFE   25 (26)
T ss_pred             CcCCCCCCCCc
Confidence            35666766664

Several members are annotated as putative helicases.

>KOG2785|consensus

Probab=85.58  E-value=2.9  Score=31.73  Aligned_cols=48  Identities=23%  Similarity=0.449  Sum_probs=36.5

Q ss_pred             ccccCCCcCCCchhHHHHhhhhcCC-CC----------------------cccCccc---ccccCChhhhhhhh
Q psy16925         93 SNVSCGWYPDESKDLKNHHNLHTGK-RP----------------------YTCPWCS---RTFANGSNCRSHKR  140 (166)
Q Consensus        93 ~c~~c~~~f~~~~~l~~H~~~h~~~-~p----------------------~~C~~C~---~~f~~~~~l~~H~~  140 (166)
                      .|.-|+..+.+-.....|+..+++- .|                      +.|-.|+   +.|......+.||.
T Consensus       168 ~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  168 DCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             ceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            5677888888888888898776642 12                      5677777   88888888888886

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=84.92  E-value=0.55  Score=33.63  Aligned_cols=90  Identities=18%  Similarity=0.334  Sum_probs=50.7

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHc--CCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccc
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIH--SDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS  126 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h--~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~  126 (166)
                      .+.|.|..|..... +...-.||..-  .....|+|.-|.+ +.+.+|+.|..-|-.......-.+ -...+|+.||.|+
T Consensus       140 Grif~CsfC~~flC-EDDQFEHQAsCQvLe~E~~KC~SCNr-lGq~sCLRCK~cfCddHvrrKg~k-y~k~k~~PCPKCg  216 (314)
T PF06524_consen  140 GRIFKCSFCDNFLC-EDDQFEHQASCQVLESETFKCQSCNR-LGQYSCLRCKICFCDDHVRRKGFK-YEKGKPIPCPKCG  216 (314)
T ss_pred             CeEEEeecCCCeee-ccchhhhhhhhhhhhccccccccccc-ccchhhhheeeeehhhhhhhcccc-cccCCCCCCCCCC
Confidence            45578888774333 33333454331  2234577777765 345567666666554321111111 1234789999999


Q ss_pred             ccccCChhhhhhhhh
Q psy16925        127 RTFANGSNCRSHKRR  141 (166)
Q Consensus       127 ~~f~~~~~l~~H~~~  141 (166)
                      ........|...-+.
T Consensus       217 ~et~eTkdLSmStR~  231 (314)
T PF06524_consen  217 YETQETKDLSMSTRS  231 (314)
T ss_pred             Ccccccccceeeeec
Confidence            988777777655554

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=84.59  E-value=0.26  Score=37.61  Aligned_cols=49  Identities=24%  Similarity=0.583  Sum_probs=36.3

Q ss_pred             ccccCCCcCCCchhHHHHhh--hhcCC--CCcccC--cccccccCChhhhhhhhh
Q psy16925         93 SNVSCGWYPDESKDLKNHHN--LHTGK--RPYTCP--WCSRTFANGSNCRSHKRR  141 (166)
Q Consensus        93 ~c~~c~~~f~~~~~l~~H~~--~h~~~--~p~~C~--~C~~~f~~~~~l~~H~~~  141 (166)
                      .+..|...|.....+..|.+  .|.++  +|+.|+  .|++.|.+...+..|...
T Consensus       291 ~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  345 (467)
T COG5048         291 KSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILL  345 (467)
T ss_pred             CCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccc
Confidence            34456677777777777877  67777  788887  688888888777777665

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=83.45  E-value=0.88  Score=21.84  Aligned_cols=10  Identities=40%  Similarity=1.099  Sum_probs=6.8

Q ss_pred             CCcccCcccc
Q psy16925        118 RPYTCPWCSR  127 (166)
Q Consensus       118 ~p~~C~~C~~  127 (166)
                      .|-.||.|+.
T Consensus        17 ~p~~CP~Cg~   26 (34)
T cd00729          17 APEKCPICGA   26 (34)
T ss_pred             CCCcCcCCCC
Confidence            4567888775

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=81.73  E-value=1.4  Score=27.30  Aligned_cols=24  Identities=33%  Similarity=0.706  Sum_probs=20.6

Q ss_pred             ccc----CcccccccCChhhhhhhhhhc
Q psy16925        120 YTC----PWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus       120 ~~C----~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      |.|    +.|++.......+..|++.+|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            788    889988888888899988766

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=81.45  E-value=1.1  Score=30.13  Aligned_cols=13  Identities=38%  Similarity=1.040  Sum_probs=9.7

Q ss_pred             cCCCCcccCcccc
Q psy16925        115 TGKRPYTCPWCSR  127 (166)
Q Consensus       115 ~~~~p~~C~~C~~  127 (166)
                      -++.|-+||+||.
T Consensus       145 ~ge~P~~CPiCga  157 (166)
T COG1592         145 EGEAPEVCPICGA  157 (166)
T ss_pred             cCCCCCcCCCCCC
Confidence            4467888999983

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=81.25  E-value=1  Score=22.82  Aligned_cols=27  Identities=26%  Similarity=0.640  Sum_probs=16.5

Q ss_pred             CCCcccCcccccccC----Chhhhhhhhhhc
Q psy16925        117 KRPYTCPWCSRTFAN----GSNCRSHKRRMH  143 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~----~~~l~~H~~~~h  143 (166)
                      ..-..|..|++.+..    .+.|..|++..|
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            344678888887765    477888885545

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=80.45  E-value=1.2  Score=21.76  Aligned_cols=13  Identities=38%  Similarity=0.956  Sum_probs=8.1

Q ss_pred             CCcccCccccccc
Q psy16925        118 RPYTCPWCSRTFA  130 (166)
Q Consensus       118 ~p~~C~~C~~~f~  130 (166)
                      ...+|+.|+..|.
T Consensus        24 ~~vrC~~C~~~f~   36 (37)
T PF13719_consen   24 RKVRCPKCGHVFR   36 (37)
T ss_pred             cEEECCCCCcEee
Confidence            3467777776653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	166
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-16
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-12
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-10
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-10
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		4e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		5e-07
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		9e-07
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		7e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		7e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		1e-04
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		3e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 79.7 bits (195), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 14/112 (12%)
Query: 29  VTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
           ++ F S S+V     A+  GE+P+ C ECG+SF+    L EH   H+ + P+KC      
Sbjct: 1   ISEFGSSSSVAQ--AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKC------ 52
Query: 89  SLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                   CG    + KDL  H   HTG++PY CP C ++F+  +N R+H+R
Sbjct: 53  ------PECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR 98

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 49  ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLK 108
           E+P+ C ECG+SF+    LQ+H   H+ + P+KC              CG    +S DL+
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKC------------PECGKSFSQSSDLQ 49
Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            H   HTG++PY CP C ++F+   +   H+R
Sbjct: 50  KHQRTHTGEKPYKCPECGKSFSRSDHLSRHQR 81

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 52  FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHH 111
           F C  CG+SF     L  HL IHSD  P+ C  C K+  + S            D+K H 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKS------------DMKKHT 49
Query: 112 NLHTGKRPYTCPWCSRTFANGSNCRSHKRR 141
            +HTG++P+ C  C + F+  SN  +H R+
Sbjct: 50  FIHTGEKPHKCQVCGKAFSQSSNLITHSRK 79

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 48  GERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDL 107
           G R  VC ECG++F     L+ H  +H+ + P++C              CG       +L
Sbjct: 31  GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF----------EGCGKRFSLDFNL 80
Query: 108 KNHHNLHTGKRPYTCPW--CSRTFANGSNCRSH 138
           + H  +HTG RPY CP+  C++ FA  +N +SH
Sbjct: 81  RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+  G L  H+ IH+   P++C IC      + N S       S  
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRIC------MRNFS------RSDH 49
Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 138
           L  H   HTG++P+ C  C R FA     + H
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL 90
          RFS ++ +  H + +H G++PF C  C ++F+ +  L  H+  H+ + P+ CDIC +K  
Sbjct: 15 RFSQKTNLDTHIR-IHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFA 73
Query: 91 KL 92
           L
Sbjct: 74 TL 75

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+    L  H+ IH+   P++C IC      + N S       S  
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRIC------MRNFS------RSDH 49
Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 138
           L  H   HTG++P+ C  C R FA     + H
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+    L  H+ IH+   P++C IC      + N S       S  
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRIC------MRNFS------RSDH 49
Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 138
           L  H   HTG++P+ C  C R FA     + H
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+    L  H+ IH+   P++C IC      + N S       S  
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRIC------MRNFS------RSDH 49
Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 138
           L  H   HTG++P+ C  C R FA     + H
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+    L  H+ IH+   P++C IC      + N S       S  
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRIC------MRNFS------RSDH 49
Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 138
           L  H   HTG++P+ C  C R FA     + H
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+    L  H+ IH+   P++C IC      + N S       S  
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRIC------MRNFS------RSDH 48
Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 138
           L  H   HTG++P+ C  C R FA     + H
Sbjct: 49  LTTHIRTHTGEKPFACDICGRKFARSDERKRH 80

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+    L  H+ IH+   P++C IC      + N S       S  
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRIC------MRNFS------RSDH 49
Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSH 138
           L  H   HTG++P+ C  C R FA     + H
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 32  FSSRSAVTAHTKAVHL-GER-PFVCHECG-----QSFASKGILQEHLTIHSDDAPWKCDI 84
           F S+  +  H  + H+ GER  FVCH  G     + F ++ +L  H+  H+ + P KC  
Sbjct: 13  FDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF 72
Query: 85  --CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC--PWCSRTFANGSNCRSHKR 140
             C K   +L N            LK H   HTG++PY C    CS+ F+N S+   H+ 
Sbjct: 73  EGCRKSYSRLEN------------LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 141 RMHPEE 146
           R H  E
Sbjct: 121 RTHSNE 126

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+ K  L  H+ IH+   P++C IC      + N S      +   
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRIC------MRNFS------QHTG 49
Query: 107 LKNHHNLHTGKRPYTCPWCSRTFA 130
           L  H   HTG++P+ C  C R FA
Sbjct: 50  LNQHIRTHTGEKPFACDICGRKFA 73

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 57  CGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTG 116
           CG+++     L+ HL  H+ + P+ CD             CGW    S +L  H+  HTG
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDW----------DGCGWKFARSDELTRHYRKHTG 62
Query: 117 KRPYTCPWCSRTFANGSNCRSHKRR 141
            RP+ C  C R F+   +   H +R
Sbjct: 63  HRPFQCQKCDRAFSRSDHLALHMKR 87

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 57  CGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTG 116
           CG+++     L+ HL  H+ + P+ CD             CGW    S +L  H+  HTG
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDW----------DGCGWKFARSDELTRHYRKHTG 63
Query: 117 KRPYTCPWCSRTFANGSNCRSHKRR 141
            RP+ C  C R F+   +   H +R
Sbjct: 64  HRPFQCQKCDRAFSRSDHLALHMKR 88

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
Query: 32  FSSRSAVTAHTKAVHLG---ERPFVCH--EC---GQSFASKGILQEHLTIHSDDAPWKCD 83
           FS+   +  H    H+G   +   VC+  EC   G+SF +K  L  H+ +H+ + P+ C 
Sbjct: 35  FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP 94
Query: 84  ICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSH 138
                        CG     S++LK H   HTG++P+ C +  C R FAN S+ + H
Sbjct: 95  F----------PGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH 141

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 31  RFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
           R+   S +  H++  H GE+P+ C   +C + F+    L+ H   H+   P++C  C +K
Sbjct: 17  RYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK 75
Query: 89  SLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSN 134
             +            S  LK H   HTG++P++C W  C + FA    
Sbjct: 76  FSR------------SDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDE 111

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 49  ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLK 108
           ++P+ C  C  SF  KG L  H T+H+ + P++C+IC  +  + +N            LK
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN------------LK 62
Query: 109 NHHNLHTGKRP 119
            H  +H+G++P
Sbjct: 63  THTRIHSGEKP 73

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 31  RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLT---IHSDDAPWKCDICSK 87
           +F S+  +  H +  H GE+PF C +CG+ +  K  L EH     ++  +  + C +C +
Sbjct: 16  KFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQE 74
Query: 88  KSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
              +              +L+ H   HTG+ PY C  CS+ F    + +SH  ++H
Sbjct: 75  TFRR------------RMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 49  ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLK 108
           ++ F+C  CG+ F     L  H   H+D+ P+ CDIC K   +  +            L+
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDH------------LR 62
Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHK 139
           +H  +H+ ++P+ C  C + F        HK
Sbjct: 63  DHRYIHSKEKPFKCQECGKGFCQSRTLAVHK 93

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 50  RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKN 109
           R + C ECG+SF+    L +H   H+ + P+KCD C K  ++ S+            L  
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH------------LIG 64
Query: 110 HHNLHTGKRP 119
           HH +HTG  P
Sbjct: 65  HHRVHTGSGP 74

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 44 AVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL 90
          ++HLG RP+ C  CG+ F  K  L  H+ IH+   P++C+IC+K+ +
Sbjct: 30 SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM 76

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 49  ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLK 108
           E+P+ C ECG++F+   IL +H  +H+ + P+KC            + CG    ++  L 
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC------------LECGKAFSQNSGLI 59
Query: 109 NHHNLHT 115
           NH  +HT
Sbjct: 60  NHQRIHT 66

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
          FS +  +  H +  H G +P+ C  C  + A    L +HL IHSD+ P+KC IC   S  
Sbjct: 18 FSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRN 76
Query: 92 LSNVS 96
           S ++
Sbjct: 77 SSQLT 81

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 51  PFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNH 110
           P  C  CG+ F+ K  L+ H+  H+   P+KC  C             +   +S  L  H
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCD------------YAAADSSSLNKH 55
Query: 111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +H+ +RP+ C  C     N S    H R
Sbjct: 56  LRIHSDERPFKCQICPYASRNSSQLTVHLR 85

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 57  CGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTG 116
           C + +     L+ HL  H+ + P+KC          +   C W    S +L  H+  HTG
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKC----------TWEGCDWRFARSDELTRHYRKHTG 72
Query: 117 KRPYTCPWCSRTFANGSNCRSHKRR 141
            +P+ C  C+R+F+   +   H +R
Sbjct: 73  AKPFQCGVCNRSFSRSDHLALHMKR 97

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDI 84
          FS+R  +  H K  H+ ++ F C E  CG+SF  K  L+EH+ +HSD   + C+ 
Sbjct: 19 FSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 73

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 41  HTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWY 100
           H + +  G   ++C  C +S+     L+ H  IHS +  + C  C K            +
Sbjct: 12  HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEK-----------VF 60
Query: 101 PDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE 146
           P      K H   HTG+R Y C  C ++F N     SH + +H ++
Sbjct: 61  PLAEYRTK-HEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD 105

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-13
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-18
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-13
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-18
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-17
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-13
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	9e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	8e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	9e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	7e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	9e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-04
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	9e-04

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 78.4 bits (194), Expect = 3e-19
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 23/123 (18%)

Query: 32  FSSRSAVTAH--TKAVHLGERPFVCHECG-----QSFASKGILQEHLTIHSDDAPWKCDI 84
           F S+  +  H  ++ +H   + FVCH  G     + F ++ +L  H+  H+ + P KC  
Sbjct: 13  FDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF 72

Query: 85  --CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC--PWCSRTFANGSNCRSHKR 140
             C K   +L N            LK H   HTG++PY C    CS+ F+N S+   H+ 
Sbjct: 73  EGCRKSYSRLEN------------LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 141 RMH 143
           R H
Sbjct: 121 RTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 65.7 bits (161), Expect = 2e-14
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 20/116 (17%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKC--DICSK 87
           F ++  +  H +  H GE+P  C    C +S++    L+ HL  H+ + P+ C  + CSK
Sbjct: 49  FKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK 107

Query: 88  KSLKLSNVSCGWYPDESKDLKNHHN-LHTGKRPYTC--PWCSRTFANGSNCRSHKR 140
                S            D   H N  H+ ++PY C  P C++ + + S+ R H +
Sbjct: 108 AFSNAS------------DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 20/101 (19%)

Query: 49  ERPFVCHECGQSFASKGILQEHLT---IHSDDAPWKCDIC----SKKSLKLSNVSCGWYP 101
           E       C Q F S+  L  H+    IH +   + C         +  K          
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFK---------- 50

Query: 102 DESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
                L  H   HTG++P+ C +  C ++++   N ++H R
Sbjct: 51  -AQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR 90

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 18/90 (20%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLT-IHSDDAPWKCDI--CS 86
           +S    +  H    H GE+P++C    C ++F++     +H    HS++ P+ C +  C+
Sbjct: 79  YSRLENLKTH-LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCT 137

Query: 87  KKSLKLSNVSCGWYPDESKDLKNHHNLHTG 116
           K+    S+            L+ H     G
Sbjct: 138 KRYTDPSS------------LRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVC--HECGQSFASKGILQEHLTIHS 75
            FS+ S    H    H  E+P+VC    C + +     L++H+    
Sbjct: 108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 76.4 bits (189), Expect = 7e-19
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEH---LTIHSDDAPWKCDICSKK 88
           F S+  +  H +  H GE+PF C +CG+ +  K  L EH     ++  +  + C +C + 
Sbjct: 17  FLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQET 75

Query: 89  SLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
             +               L+ H   HTG+ PY C  CS+ F    + +SH  ++H
Sbjct: 76  FRRRME------------LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 66.0 bits (162), Expect = 8e-15
 Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 15/98 (15%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
             G     C  C + F SK  L+ H   H+ + P++C  C K   +  N           
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKEN----------- 50

Query: 106 DLKNHH---NLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            L  H     ++  ++ +TC  C  TF      R H  
Sbjct: 51  -LLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 74.9 bits (185), Expect = 3e-18
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 18/113 (15%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDI--CSKKS 89
           F   SA+  H    H G R  VC ECG++F     L+ H  +H+ + P++C    C K+ 
Sbjct: 17  FRDNSAMRKHLH-TH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF 74

Query: 90  LKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
               N            L+ H  +HTG RPY CP+  C++ FA  +N +SH  
Sbjct: 75  SLDFN------------LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 61.8 bits (151), Expect = 3e-13
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 17/96 (17%)

Query: 49  ERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
            R   C    C + F     +++HL  H       C  C K  ++ S             
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTHGPR-VHVCAECGKAFVESSK------------ 49

Query: 107 LKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
           LK H  +HTG++P+ C +  C + F+   N R+H R
Sbjct: 50  LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR 85

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 17/93 (18%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDI--CSK 87
           F   S +  H   VH GE+PF C    CG+ F+    L+ H+ IH+ D P+ C    C+K
Sbjct: 44  FVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 102

Query: 88  KSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPY 120
           K  + +N            LK+H   H   +  
Sbjct: 103 KFAQSTN------------LKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWK 81
           RFS    +  H + +H G+RP+VC    C + FA    L+ H+  H+     +
Sbjct: 73  RFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 76.3 bits (189), Expect = 3e-18
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 13/109 (11%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS R+ + AH +  H GE+P+ C ECG+SF+    L+ H   H+ + P+KC  C K   +
Sbjct: 87  FSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSR 145

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             N            L  H   HTG++PY CP C ++F+       H+R
Sbjct: 146 EDN------------LHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 76.3 bits (189), Expect = 4e-18
 Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 17/121 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK-SL 90
               S+  A   A+  GE+P+ C ECG+SF+    L EH   H+ + P+KC  C K  S 
Sbjct: 3   EFGSSSSVAQ-AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS- 60

Query: 91  KLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY 150
                       + KDL  H   HTG++PY CP C ++F+  +N R+H+ R H  E K Y
Sbjct: 61  ------------DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ-RTHTGE-KPY 106

Query: 151 E 151
            
Sbjct: 107 A 107

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.9 bits (188), Expect = 5e-18
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 13/109 (11%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS +  +T H +  H GE+P+ C ECG+SF+ +  L+ H   H+ + P+ C  C K   +
Sbjct: 59  FSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQ 117

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           L++            L+ H   HTG++PY CP C ++F+   N  +H+R
Sbjct: 118 LAH------------LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR 154

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 55.9 bits (136), Expect = 1e-10
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 13/88 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS  + + AH +  H GE+P+ C ECG+SF+ +  L  H   H+ + P+KC  C K   +
Sbjct: 115 FSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSR 173

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRP 119
                          L  H   HTGK+ 
Sbjct: 174 RDA------------LNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 50.1 bits (121), Expect = 2e-08
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 60  SFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRP 119
           S            +   + P+ C  C K   +  +            L  H   HTG++P
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDH------------LAEHQRTHTGEKP 49

Query: 120 YTCPWCSRTFANGSNCRSHKR 140
           Y CP C ++F++  +   H+R
Sbjct: 50  YKCPECGKSFSDKKDLTRHQR 70

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 73.7 bits (182), Expect = 8e-18
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 17/114 (14%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
           R+   S +  H++  H GE+P+ C   +C + F+    L+ H   H+   P++C  C +K
Sbjct: 17  RYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK 75

Query: 89  SLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
             +  +            LK H   HTG++P++C W  C + FA       H  
Sbjct: 76  FSRSDH------------LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 66.4 bits (163), Expect = 5e-15
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%)

Query: 48  GERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
            +RPF+C    C + +     LQ H   H+ + P++CD             C      S 
Sbjct: 3   EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDF----------KDCERRFSRSD 52

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            LK H   HTG +P+ C  C R F+   + ++H R
Sbjct: 53  QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR 87

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 72.5 bits (179), Expect = 2e-17
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 15/116 (12%)

Query: 36  SAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNV 95
           S  +   +     ++ F+C  CG+ F     L  H   H+D+ P+ CDIC K   +  + 
Sbjct: 3   SGSSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDH- 60

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
                      L++H  +H+ ++P+ C  C + F        HK  +H +      
Sbjct: 61  -----------LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK-TLHMQT-SSPT 103

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 63.6 bits (156), Expect = 4e-14
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 13/91 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           F+    +  H +  H  ERP+ C  C ++F  +  L++H  IHS + P+KC  C K   +
Sbjct: 27  FTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ 85

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
                          L  H  LH      T 
Sbjct: 86  SRT------------LAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.3 bits (93), Expect = 6e-05
 Identities = 9/37 (24%), Positives = 13/37 (35%)

Query: 104 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           S            K+ + C +C R F    N   H+R
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER 38

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 72.1 bits (178), Expect = 2e-17
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 12/95 (12%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
                P  C  CG+ F+ K  L+ H+  H+   P+KC  C   +   S+           
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSS----------- 51

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            L  H  +H+ +RP+ C  C     N S    H R
Sbjct: 52  -LNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 69.0 bits (170), Expect = 3e-16
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 13/91 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS +  +  H    H G +P+ C  C  + A    L +HL IHSD+ P+KC IC   S  
Sbjct: 18  FSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRN 76

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
            S             L  H   HTG    + 
Sbjct: 77  SSQ------------LTVHLRSHTGDSGPSS 95

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 70.6 bits (174), Expect = 6e-17
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 14/100 (14%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
             G     C  CG+ F     L  H   HS + P+ C +C  +  +              
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDR----------- 50

Query: 106 DLKNHHNLHTG--KRPYTCPWCSRTFANGSNCRSHKRRMH 143
            +  H   H G   +PY C  C + F+   +   H +++H
Sbjct: 51  -MSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 69.8 bits (172), Expect = 2e-16
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 15/106 (14%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           F+ +S    H   +HLG RP+ C  CG+ F  K  L  H+ IH+   P++C+IC+K+ + 
Sbjct: 19  FTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMW 77

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS 137
             +               H ++ +  + Y      +     S   S
Sbjct: 78  RDSF--------------HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.5 bits (148), Expect = 6e-13
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 17/107 (15%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDES 104
              G++ + C +CG+SF  K     H+++H    P+ C +C KK     +          
Sbjct: 4   GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHH---------- 52

Query: 105 KDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
             L  H  +HTG +PY C  C++ F    +   H R +     K YE
Sbjct: 53  --LVGHMKIHTGIKPYECNICAKRFMWRDSF--H-RHVTSCT-KSYE 93

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 68.6 bits (169), Expect = 3e-16
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 14/94 (14%)

Query: 49  ERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKD 106
           ERP+ C    C + F+  G L  H+ IH+   P++C IC +   +  +            
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDH------------ 49

Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           L  H   HTG++P+ C  C R FA     + H +
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 56.7 bits (138), Expect = 1e-11
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 13/86 (15%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL 90
           RFS   ++T H + +H G++PF C  C ++F+    L  H+  H+ + P+ CDIC +K  
Sbjct: 15  RFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73

Query: 91  KLSNVSCGWYPDESKDLKNHHNLHTG 116
           +                K H  +H  
Sbjct: 74  RSDE------------RKRHTKIHLR 87

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 67.5 bits (164), Expect = 2e-15
 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 12/123 (9%)

Query: 33  SSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHL--TIHSDDAPWKCDICSKKSL 90
           SS S+   +  ++  G   F C +C  ++ +   L  H+  T H  D   + D  +    
Sbjct: 2   SSGSSGKLY-GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNN---- 56

Query: 91  KLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY 150
                   W     + L         ++   C +C  +F +  +   H  +    +    
Sbjct: 57  -----PKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111

Query: 151 ESS 153
            SS
Sbjct: 112 PSS 114

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 67.7 bits (166), Expect = 3e-15
 Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 23/121 (19%)

Query: 32  FSSRSAVTAHT--KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKS 89
            SS   +      K +   +       C ++F++   L  H+T+     P + +      
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV---- 59

Query: 90  LKLSNVSCGWY--PDESK------DLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHK 139
                  C W   P E K       L NH  +HTG++P+ CP+  C + FA   N + HK
Sbjct: 60  -------CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK 112

Query: 140 R 140
           R
Sbjct: 113 R 113

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 64.2 bits (157), Expect = 8e-14
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 26/122 (21%)

Query: 32  FSSRSAVTAHTKAVHLGERPFV---------CHECGQSFASKGILQEHLTIHSDDAPWKC 82
           FS+   +  H   +     P           C   G+SF +K  L  H+ +H+ + P+ C
Sbjct: 35  FSTMHELVTH-VTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPC 93

Query: 83  DI--CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSH 138
               C K   +  N            LK H   HTG++P+ C +  C R FAN S+ + H
Sbjct: 94  PFPGCGKIFARSEN------------LKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH 141

Query: 139 KR 140
             
Sbjct: 142 MH 143

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 56.5 bits (137), Expect = 6e-11
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 17/95 (17%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDI--CSK 87
           F ++  +  H + VH GE+PF C    CG+ FA    L+ H   H+ + P+KC+   C +
Sbjct: 72  FKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDR 130

Query: 88  KSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC 122
           +    +N S         D K H ++HT  +    
Sbjct: 131 R---FANSS---------DRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 12/95 (12%), Positives = 18/95 (18%), Gaps = 21/95 (22%)

Query: 56  ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHT 115
             G S            I           C +                  +L  H  +  
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTF------------STMHELVTHVTMEH 49

Query: 116 GKRPYT---------CPWCSRTFANGSNCRSHKRR 141
              P           CP   ++F       +H R 
Sbjct: 50  VGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCD 83
           F+    +  H +  H GE+PF C    C + FA+    ++H+ +H+ D      
Sbjct: 102 FARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 9/50 (18%), Positives = 14/50 (28%)

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
           S G      K   +   +   +       C RTF+      +H    H  
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG 51

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 68.0 bits (167), Expect = 6e-15
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 18/115 (15%)

Query: 43  KAVHLGERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCD--ICSKKSLKLSNVSCG 98
           KA+ +  + ++C   +CG ++     LQ HL  H+ + P+ C    C K    L +    
Sbjct: 4   KALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHH---- 59

Query: 99  WYPDESKDLKNHHNLHTGKRPYTC--PWCSRTFANGSNCRSHKRRMHPEELKLYE 151
                   L  H   HTG++ +TC    C   F   +N + H  R H  ++ +Y 
Sbjct: 60  --------LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYV 106

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 59.5 bits (145), Expect = 9e-12
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 15/118 (12%)

Query: 32  FSSRSAVTAHTKAVHLGER--PFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSK 87
           F++++ +  H        +   +VCH   CG++F     L+ H   H+   P++C     
Sbjct: 84  FTTKANMKKHFN-RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC----- 137

Query: 88  KSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
                 +  C         LK H  +H G        CS      +    H    H +
Sbjct: 138 -----PHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 10/96 (10%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
                      CG+++     L+ HL  H+ + P+ CD             CGW    S 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW----------DGCGWKFARSD 51

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 141
           +L  H+  HTG RP+ C  C R F+   +   H +R
Sbjct: 52  ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIH 74
          +F+    +T H    H G RPF C +C ++F+    L  H+  H
Sbjct: 46 KFARSDELTRH-YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 63.3 bits (155), Expect = 3e-14
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 13/93 (13%)

Query: 50  RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKN 109
           +PF C  C ++F+    L  H+  H+ + P+ CDIC +K  +                K 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDE------------RKR 49

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM 142
           H ++     P          +   +  +   R+
Sbjct: 50  HRDIQHIL-PILEDKVEELLSKNYHLENEVARL 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 49.4 bits (119), Expect = 7e-09
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLK 91
           FS    +T H +  H GE+PF C  CG+ FA     + H  I     P   D   +   K
Sbjct: 13  FSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHIL-PILEDKVEELLSK 70

Query: 92  LSNVSCGWYPDESKDLKNHHNLHTG 116
             ++         ++         G
Sbjct: 71  NYHL---------ENEVARLKKLVG 86

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 62.6 bits (153), Expect = 8e-14
 Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 32  FSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKS 89
             S               R   C    C + +     L+ HL  H+ + P+KC       
Sbjct: 3   SGSSGPDLEK-------RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW----- 50

Query: 90  LKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 141
                  C W    S +L  H+  HTG +P+ C  C+R+F+   +   H +R
Sbjct: 51  -----EGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.8 bits (91), Expect = 8e-05
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 31  RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSD 76
           RF+    +T H +  H G +PF C  C +SF+    L  H+  H +
Sbjct: 56  RFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 13/87 (14%)

Query: 46  HLGERPFVC--HECGQSFASKGILQEHLTI-HSDDAPWKCDICSKKSLKLSNVSCGWYPD 102
             G     C    CG+ F+++  L  H    H     + C             +CG   +
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP----------EPACGKSFN 51

Query: 103 ESKDLKNHHNLHTGKRPYTCPWCSRTF 129
             K LK H  LH+  R Y C +   + 
Sbjct: 52  FKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSK 87
          FS+R  +  H K  H+ ++ F C E  CG+SF  K  L+EH+ +HSD   + C+    
Sbjct: 19 FSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 2/32 (6%)

Query: 114 HTGKRPYTCPW--CSRTFANGSNCRSHKRRMH 143
            +G     C +  C R F+N      HK+  H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 59.7 bits (146), Expect = 7e-13
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 12/89 (13%)

Query: 52  FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHH 111
           F C  CG+SF     L  HL IHSD  P+ C  C K+  + S+            +K H 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSD------------MKKHT 49

Query: 112 NLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
            +HTG++P+ C  C + F+  SN  +H R
Sbjct: 50  FIHTGEKPHKCQVCGKAFSQSSNLITHSR 78

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.5 bits (145), Expect = 8e-13
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 15/80 (18%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLTIHS--DDAPWKCDICSKKSLKLSNVSCGWYPD 102
            H GE+P+ C+ C   F   G ++ H+      + A + C  C                 
Sbjct: 9   THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDT--------VIA---- 56

Query: 103 ESKDLKNHH-NLHTGKRPYT 121
              DL  H    H+   P +
Sbjct: 57  RKSDLGVHLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.2 bits (134), Expect = 4e-11
 Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 14/81 (17%)

Query: 65  GILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTG--KRPYTC 122
           G        HS + P++C IC  +  +               +K H           + C
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGT------------MKMHILQKHTENVAKFHC 48

Query: 123 PWCSRTFANGSNCRSHKRRMH 143
           P C    A  S+   H R+ H
Sbjct: 49  PHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.0 bits (105), Expect = 5e-07
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
             +    H+G++PY C  C   F      + H  + H E +  + 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH 47

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.1 bits (144), Expect = 1e-12
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 16/89 (17%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLTIH----SDDAPWKCDICSKKSLKLSNVSCGWY 100
            H GE+P+ C  C ++F  K +L  H   +       A + C  C K   + +       
Sbjct: 9   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT------ 62

Query: 101 PDESKDLKNHHNLHTGKRPYTCPWCSRTF 129
                 +  H +   G           + 
Sbjct: 63  ------MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 5/60 (8%)

Query: 32 FSSRSAVTAHTKAVHLGE----RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSK 87
          F  +  +  H K  +         FVC +CG++F  +  +  H    +     + +    
Sbjct: 25 FRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 107 LKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL--KLYE-SSLGKIF 158
             +    HTG++PY C  C +TF        H +R H        +  S  GK F
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTF 57

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 57.9 bits (141), Expect = 2e-12
 Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 44  AVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDE 103
           +      P  C EC  S +SK  L+ H  IH  D P+KC+ CS  + + SN         
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSN--------- 52

Query: 104 SKDLKNHHNLHTGKRPYTCP 123
              L  H     G       
Sbjct: 53  ---LSKHMKKFHGDMSGPSS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 57.5 bits (140), Expect = 5e-12
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 13/85 (15%)

Query: 36  SAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNV 95
                H   +   ++P+ C  C  SF  KG L  H T+H+ + P++C+IC  +  + +N 
Sbjct: 3   HHHHHH-SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN- 60

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPY 120
                      LK H  +H+G++PY
Sbjct: 61  -----------LKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 48.6 bits (117), Expect = 1e-08
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 67  LQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS 126
              H  +   D P+KCD C        N            L +H  +HTG++PY C  C 
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGN------------LASHKTVHTGEKPYRCNICG 52

Query: 127 RTFANGSNCRSHKR 140
             F   +N ++H R
Sbjct: 53  AQFNRPANLKTHTR 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 104 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                +H ++    +PY C  C  +F    N  SHK 
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT 38

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 55.9 bits (136), Expect = 1e-11
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDES 104
           +H GE+P+ C ECG++F+   IL +H  +H+ + P+KC  C K   + S           
Sbjct: 8   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSG---------- 57

Query: 105 KDLKNHHNLHTGKRPY 120
             L NH  +HT     
Sbjct: 58  --LINHQRIHTSGPSS 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.5 bits (134), Expect = 3e-11
 Identities = 14/89 (15%), Positives = 24/89 (26%), Gaps = 16/89 (17%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDA---PWKCDICSKKSLKLSNVSCGWYPD 102
             G     C  CG +   K  L  H   H++      + C+ C K+  K  +        
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDS-------- 53

Query: 103 ESKDLKNHHNL-HTGKRPYTCPWCSRTFA 130
               +  H +  H             +  
Sbjct: 54  ----VAAHRSKSHPALLLAPQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.9 bits (109), Expect = 1e-07
 Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 2/61 (3%)

Query: 31 RFSSRSAVTAHTK--AVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
              ++++  H +  A  +    F C  CG+ F     +  H +             S  
Sbjct: 16 TCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGP 75

Query: 89 S 89
          S
Sbjct: 76 S 76

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 53.3 bits (129), Expect = 2e-10
 Identities = 13/99 (13%), Positives = 22/99 (22%), Gaps = 38/99 (38%)

Query: 46  HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESK 105
             GE  + C  C + +        H                                   
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSH------------------------------ 34

Query: 106 DLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHP 144
                       + Y CP+C + F    N  +H + +H 
Sbjct: 35  --------KRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE 151
             G+  Y C  CSR + + SN   H    H   +K+Y 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYP 42

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 8/45 (17%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 31 RFSSRSAVTAHTK-AVHLGERPFVCHECGQSFASKGILQEHLTIH 74
           ++  S    H   +     + + C  C + F  K  +  H+ I 
Sbjct: 19 VYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.2 bits (129), Expect = 2e-10
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 13/87 (14%)

Query: 34  SRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLS 93
           S  +     +      R + C ECG+SF+    L +H   H+ + P+KCD C K  ++ S
Sbjct: 2   SSGSSGRS-EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60

Query: 94  NVSCGWYPDESKDLKNHHNLHTGKRPY 120
           +            L  HH +HTG  P 
Sbjct: 61  H------------LIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.0 bits (100), Expect = 4e-06
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWK 81
          FS  S ++ H +  H GE+P+ C ECG++F  +  L  H  +H+   P  
Sbjct: 28 FSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 104 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           S            +R Y C  C ++F++ S+   H+R
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR 39

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.5 bits (124), Expect = 1e-09
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 52  FVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKN 109
           +VCH   CG++F     L+ H   H+   P++C           +  C         LK 
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC----------PHEGCDKRFSLPSRLKR 51

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
           H  +H G        CS      +    H    H
Sbjct: 52  HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSK 87
          F   + +  H +  H  + P+ C    C + F+    L+ H  +H+     K D CS 
Sbjct: 13 FKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSF 69

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHL-TIHSDDAPWKCDICSK 87
           +     +P++C  CG+ F+    L  H+  +H+ + P KC +   
Sbjct: 4  GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFAS 63
          FS    +  H K VH  ERP  C       +S
Sbjct: 22 FSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 7/35 (20%), Positives = 17/35 (48%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
           +  +  +  +PY C  C + F+   +   H +++H
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 40/94 (42%)

Query: 50  RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKN 109
           R FVC  C ++FA +    EHL  H                                   
Sbjct: 1   RSFVCEVCTRAFARQ----EHLKRH----------------------------------- 21

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH 143
            +  HT ++PY C  C+R F        H +++H
Sbjct: 22  -YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.9 bits (89), Expect = 8e-05
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 32 FSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHL-TIHS 75
          F+ +  +  H    H  E+P+ C  C ++F  + +L  H   IHS
Sbjct: 12 FARQEHLKRH-YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 8e-08
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GERP+ C+ECG++F     L EHL  H  +     
Sbjct: 4  GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  +G+RPY C  C + F   S+   H  + H  E K    S G
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFRE-KSSGPSSG 46

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GERPF C+ECG+ F  +  L  HL +HS +     
Sbjct: 4  GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 9e-04
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  +G+RP+ C  C + F   S+   H  R+H  E K    S G
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLHSRE-KSSGPSSG 46

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G++PF C  CG+SF +KG L  H  IH+ +     
Sbjct: 6  SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++P+ C  C ++F    N  +H+R
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQR 33

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
             GE+PF C ECG+ F +      H   HS + P    
Sbjct: 6  SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 8e-05
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  +G++P+ C  C + F   S C SH+R
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR 33

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+ F     L  H  +H+ + P   
Sbjct: 6  SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  +G++P+ C  C + F   S   SH+R
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
             GE+P+ C ECG+ +  +  L  H  +H+ +      
Sbjct: 6  SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 4e-07
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
           +   GE+PF C  CG+SF  +  L  H  +H+ + P    
Sbjct: 4  GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 4e-04
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++P+ C  C ++F   S    H  
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM 33

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 44.2 bits (105), Expect = 5e-07
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 96  SCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR 141
           SC      S +L  H  +HTG++P+ C  C R F+   +  +H R 
Sbjct: 26  SCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKK 88
               + +  +        RP+ C    C + F+    L  H+ IH+   P++C IC + 
Sbjct: 2  EPHPMNNLLNYV---VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GE+PF C  C ++F+SK  L  H   H+++ P   
Sbjct: 2  SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P++C+ECG+SF  K  L  H  IH+ + P   
Sbjct: 6  SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C ++F   S+   H+R
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRR 33

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 5e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GERP  C+ECG+SF     L +H  IH+ + P   
Sbjct: 6  SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G + F C ECG++F  K  L  H  IH+ + P   
Sbjct: 6  SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 7/32 (21%), Positives = 14/32 (43%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG + + C  C + F   S    H++
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK 33

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE PF+C ECG+ F  K  L  H  IH+ + P   
Sbjct: 6  SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG+ P+ C  C + F + +N   H++
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQK 33

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+S+  +  L +H  +H+ + P   
Sbjct: 6  SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 43.0 bits (102), Expect = 7e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAP 79
            GE P++C +CG+SF  +G L  H    S   P
Sbjct: 6  SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
              E+P+ C +CG+ +  +  L  H  +H  +     
Sbjct: 6  SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  + ++PY C  C + +    N   H+R
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR 33

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GER + C ECG++FA K  L  H  IH+ + P   
Sbjct: 6  SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG+R Y C  C + FA  S    H +R+H  E K    S G
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMH-QRIHTGE-KPSGPSSG 46

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE P+ CHECG++F+ K  L  H   H+ + P   
Sbjct: 6  SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 40 AHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            + +   GE+PF C +CG++F+    L +H  IH+ + P   
Sbjct: 1  GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++P+ C  C + F++      H+ R+H  E K    S G
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTGE-KPSGPSSG 46

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+ F+ +  L  H  +H+ + P   
Sbjct: 6  SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++P+ C  C + F+  S    H +
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK 33

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F  +  L  H  IH+ + P   
Sbjct: 6  SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F + SN  +H++
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQK 33

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C +CG+SF  K  L+ H   H+ +     
Sbjct: 6  SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C ++F   S  R H++
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 44.2 bits (104), Expect = 8e-07
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 5/79 (6%)

Query: 45  VHLGERPFVCHECGQSFASKGILQEHLT-IHSDDAPWKCDICSKKSLKLSNVSCGWYPDE 103
           +   +       C ++F++   L  H+T  H         +C  +       S       
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSF----KA 74

Query: 104 SKDLKNHHNLHTGKRPYTC 122
              L NH  +HTG++    
Sbjct: 75  KYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHEC--------GQSFASKGILQEHLTIHSDDAPWKC 82
           FS+   +  H    H+G      H C        G+SF +K  L  H+ +H+ +     
Sbjct: 34 TFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            +GE+ + C EC   F+    L+ H  +H  + P   
Sbjct: 6  SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +   G++ + C  C   F+  S+ R H+ 
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F+ K IL  H   H+ + P   
Sbjct: 6  SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  +G++PY C  C +TF+  S   +H+R
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQR 33

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G+RP+ C ECG++F +K  L  H   H+ + P   
Sbjct: 6  SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG+RPY C  C + F   S+   H+R
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRR 33

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            GE P+ C ECG++F  K  L  H   H+ ++    
Sbjct: 5  SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GER + C ECG++F  K  L  H  IH  + P   
Sbjct: 6  SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+ F     L  H  +H+ + P   
Sbjct: 6  SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  +G++P+ C  C + F   S+  SH +R+H  E K    S G
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVHTGE-KPSGPSSG 46

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 9e-07
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            +GE+ + C  CG+ F+    LQ H  +H+ + P   
Sbjct: 6  SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 9e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
           +   GE+PF C ECG +F+    L +HL  H    P    
Sbjct: 4  GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.6 bits (88), Expect = 7e-05
 Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++P+ C  C   F+   +   H  R H         S G
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHERT-DPSGPSSG 46

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+ + C ECG+SF+    L +H  +HS + P   
Sbjct: 6  SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++ Y C  C ++F+       H+R
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER 33

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++FA K  L +H  IH+ + P   
Sbjct: 6  SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + FA  +N   H+R
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GERP++C  CG++F  +  L +H  IH+ + P   
Sbjct: 6  SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG+RPY C  C + F + SN   H++
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+ + C+ECG+ F+    L +H  IH+ + P   
Sbjct: 6  SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++ Y C  C + F+  S    H++
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G +P+VC+ECG++F SK  L  H   H+ ++    
Sbjct: 6  SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.5 bits (83), Expect = 5e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG +PY C  C + F + S    H R
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR 33

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG++F     L  HL IH+ + P   
Sbjct: 6  SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 40 AHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            + +   GE+P+ C+ECG+ F     L  H  +H+   P   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GE+P+ C ECG+SF+    L +H   H+ + P   
Sbjct: 4  GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 7/31 (22%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +   G++PY C  C ++F+       H  
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWI 33

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
             GE+P+ C+ CG++F     L +HL +H+ +      
Sbjct: 6  SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +  TG++PY+C  C + F   ++   H  R+H +E  L   S G
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHL-RVHTQE-TLSGPSSG 46

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            GE+P  C ECG++F  K  L  H   H DD     
Sbjct: 7  GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F+SK  L  H+  HS + P   
Sbjct: 6  SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +   G++PY C  C + F++ S    H  R H  E K    S G
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSGE-KPSGPSSG 46

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.1 bits (103), Expect = 1e-06
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 15/99 (15%)

Query: 48  GERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDL 107
            +  + C  C    +S      H  +  + A   C  CS +               S +L
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFF-------------SPEL 57

Query: 108 KNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE 146
           K  H      +  TC  C RTF +  +   H+  +H + 
Sbjct: 58  KQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG+ F  +  L  H  +H+ + P   
Sbjct: 6  SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 7e-05
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F    +  +H  
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHM 33

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C +CG+ + SK  L  H  +H+ + P   
Sbjct: 6  SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + + +  N   H++
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK 33

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            G  P+ C +C +SF+ K  L  H  +H+ + P   
Sbjct: 7  GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +   G  PY C  C ++F+       H +RMH  E K    S G
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMHTRE-KPSGPSSG 46

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG+SF     L +H  +HS + P   
Sbjct: 6  SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C ++F   S    H+R
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GE+P+ C ECG++F     L EH  IH+   P   
Sbjct: 4  GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P++C ECG++F  +  L +H  IH+   P   
Sbjct: 6  SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F   SN   H++
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F +   L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F   SN  +H+ 
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C +CG+SF  K  L  H  IH+ + P   
Sbjct: 6  SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F + S    H+R
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 40 AHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            + +   GE+P+ C  C ++F+    L +H  +HS + P   
Sbjct: 1  GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F++ ++   H+R
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQR 33

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            GE P+ C ECG+ F+ K  L  H   HS  +    
Sbjct: 7  GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F       +H  +H+   P   
Sbjct: 6  SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 6e-05
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F + S+C  H+R
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G +P+ C +C ++F+ K  L  H   H+   P   
Sbjct: 6  SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F ++  L  H   HS + P   
Sbjct: 6  SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C +CG++F  K  L  H   H+ +     
Sbjct: 6  SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  C ++F  K  L +H   H+ + P   
Sbjct: 6  SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C ECG+SF+    L  H  IH+ + P   
Sbjct: 6  SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++P+ C  C ++F+  S   +H+R
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQR 33

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  C +SF     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C ++F  GS+   H+R
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  +G++PY C  C + F   S+  +H R
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR 33

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+VC  CG++F     L  H  IH+ + P   
Sbjct: 6  SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  +G++PY C +C + F   +    H+R
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C++CG++F+ +  L  H  IH+   P   
Sbjct: 6  SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F+  S+  +H+ 
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G++ F C+EC ++F     L  H  IH+ + P   
Sbjct: 6  SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +   GK+ + C  C +TF   S+   H+R
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR 33

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+PF C EC ++F +K  L  H   H+ + P   
Sbjct: 6  SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 4e-04
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +  TG++P+ C  C + F   SN   H +R H  E K    S G
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTHTGE-KPSGPSSG 46

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F+    L +H  +H+ + P   
Sbjct: 6  SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ CHECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G +P++C+ECG++F+    L  H  IH+ + P   
Sbjct: 6  SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG +PY C  C + F+  S+  +H+ 
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+EC ++F +K  L  H   H+ ++    
Sbjct: 6  SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.5 bits (83), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F   SN   H+R
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQR 33

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C ECG++F     LQEH  IH+ + P   
Sbjct: 6  SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++PY C  C + F + S  + H+R
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQR 33

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+   P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG++PY C  C + F   S+  +H+ R+H    K    S G
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTGV-KPSGPSSG 46

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G +P+ C+ECG++F+    L  H  +H+ + P   
Sbjct: 6  SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  TG +PY C  C + F+  S    H+ R+H  E K    S G
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQ-RVHTGE-KPSGPSSG 46

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F   S+   H+ 
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG 33

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F+    L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +  TG++PY C  C + F+  S    H+R
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR 33

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
            G++P+ C EC ++F   G L +H  +H+ +     
Sbjct: 7  GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +     +   CHECG+ F  K  L +H  IH+ + P   
Sbjct: 4  GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.9 bits (97), Expect = 4e-06
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIH 74
               GE+P+ C  CG  F     L+ HL IH
Sbjct: 3  SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                 G++PY C  C   F +    +SH R
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR 32

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
           +  +  TGK+PY C  C + F   ++   H R  H  E K    S G
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHL-TIHSDDAPWKC 82
             G++P+ C ECG++F     L  H    H+ + P   
Sbjct: 6  SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  CG+SF  K  L  H  IH+ + P   
Sbjct: 6  SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  CG++F     L +H ++HS + P   
Sbjct: 6  SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             G++P+ C+ECG+ F     L  H  IH+ + P   
Sbjct: 6  SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C  CG++F+ +  L  H  IHS   P   
Sbjct: 6  SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GER   C +CG+ F       +H  IH+ + P   
Sbjct: 4  GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
           +  +   G+R + C  C + F   SN   H+R
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P  C ECG+SF+    L  H  IH+ + P   
Sbjct: 6  SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
             +  TG++P+ C  C ++F+  S    H+R
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQR 33

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 40.8 bits (96), Expect = 9e-06
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 16/79 (20%)

Query: 67  LQEHLTIHSDDAPWKCDI--CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW 124
                   S      C    C K   K S+            LK H   HTG++P++C W
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSH------------LKAHTRTHTGEKPFSCSW 52

Query: 125 --CSRTFANGSNCRSHKRR 141
             C R FA       H+R 
Sbjct: 53  KGCERRFARSDELSRHRRT 71

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
             GE+P+ C+ECG++F  K +L  H   H+  +    
Sbjct: 6  SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAP 79
             GE+P+ C +CG++F+ KG L  H+ +H+   P
Sbjct: 5  SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                 G++PY C  C + F+   +   H R
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.1 bits (93), Expect = 1e-05
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 12/65 (18%)

Query: 52  FVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHH 111
           ++C ECG       +L++H+  H+D  P+ C  C+       N            L  H 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGN------------LTKHM 49

Query: 112 NLHTG 116
                
Sbjct: 50  KSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.3 bits (91), Expect = 2e-05
 Identities = 15/49 (30%), Positives = 20/49 (40%)

Query: 97  CGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
           CG    +   LK H   HT  RPY C +C+ +F    N   H +     
Sbjct: 7   CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHS 75
          R    S +  H +  H   RP+ C  C  SF +KG L +H+   +
Sbjct: 10 RXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD 83
           +   GE+   C ECG++F     L+ H  +H  +      
Sbjct: 4  GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLG 155
             +  +G++ +TC  C + F   S  R H+ R+H  E K    S G
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGE-KCSGPSSG 46

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
           +   GE+P+ C EC ++F+    L +H  +H+  +    
Sbjct: 2  SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC 82
               + + C+ECG++F     L  H  IH+  +    
Sbjct: 6  SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIH 74
             GE+P+ C  CG  F     L+ H+ IH
Sbjct: 5  SSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                 G++PY C  C   F   ++ R+H  
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVL 32

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIH 74
           +   G+R + C ECG+SF  KG L  H  IH
Sbjct: 2  SSGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 38.1 bits (89), Expect = 5e-05
 Identities = 13/46 (28%), Positives = 16/46 (34%), Gaps = 3/46 (6%)

Query: 40 AHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCD 83
          +       GE+PF C    CG  F+    L  H   HS   P    
Sbjct: 2  SSGS-SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 35.0 bits (81), Expect = 7e-04
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 109 NHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKR 140
           +  +  TG++P+ C W  C   F+       H+R
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (87), Expect = 9e-05
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 43 KAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAP 79
           +   GE PF C +C + F  +  L +H   H+  + 
Sbjct: 4  GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.5 bits (84), Expect = 2e-04
 Identities = 10/39 (25%), Positives = 14/39 (35%)

Query: 48 GERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICS 86
            +   C  CG+ F     L  H   HS + P+     S
Sbjct: 9  TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 35.8 bits (82), Expect = 6e-04
 Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 19/86 (22%)

Query: 35  RSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSN 94
            S  +   + +HLG+R   C +CG  F          +  S      C+ C K S + + 
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAA 54

Query: 95  VSCGWYPDESKDLKNHHNLHTGKRPY 120
                       L       +GK+  
Sbjct: 55  ------------LNKDEGNESGKKTS 68

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1 Length = 35

 Score = 34.7 bits (79), Expect = 9e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSD 76
            G+RPFVC  C  +F +K     HL +H+D
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.86
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.84
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.8
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.72
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.72
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.71
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.68
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.68
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.65
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.64
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.63
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.55
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.52
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.52
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.51
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.51
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.49
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.49
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.47
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.47
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.47
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.47
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.46
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.44
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.43
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.42
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.42
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.42
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.4
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.38
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.36
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.35
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.35
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.34
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.31
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.31
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.31
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.3
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.3
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.29
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.26
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.24
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.18
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.16
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.13
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.12
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.11
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.06
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.02
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.02
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.98
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.97
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.97
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.96
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.96
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.95
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.95
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.93
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.92
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.92
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.91
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.91
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.91
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.91
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.9
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.89
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.88
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.87
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.82
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.81
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.81
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.79
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.79
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.76
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.76
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.74
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.71
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.7
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.65
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.64
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.61
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.6
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.6
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.58
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.53
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.52
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.46
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.41
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.37
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.37
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.37
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.34
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.28
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.28
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.26
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.25
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.25
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.24
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.24
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.23
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.19
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.17
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.17
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.17
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.46
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.16
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.16
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.15
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.15
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.15
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.42
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.13
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.13
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.13
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.13
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.12
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.4
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.11
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.1
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.1
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.06
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.06
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.27
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.27
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.98
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.91
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.07
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.74
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.72
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.61
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.21
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.97
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	96.0
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.72
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.54
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.3
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.26
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.26
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.86
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.56
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.54
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.27
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	90.44
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.35
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.77
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	83.97
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.19
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	81.67

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=5.6e-31  Score=179.54  Aligned_cols=146  Identities=30%  Similarity=0.580  Sum_probs=119.1

Q ss_pred             CCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCcccccc----
Q psy16925         17 ASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKL----   92 (166)
Q Consensus        17 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~----   92 (166)
                      ......|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|...    
T Consensus        16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   94 (190)
T 2i13_A           16 EPGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLR   94 (190)
T ss_dssp             ---------------CCSSHHHHHGGG-CC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             cCCCCCCcCCCCccccCCHHHHHHHHH-HcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHH
Confidence            344567999999999999999999987 789999999999999999999999999999999999999999999653    


Q ss_pred             ------------ccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHHhhhhhhh
Q psy16925         93 ------------SNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLY  160 (166)
Q Consensus        93 ------------~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~f~~  160 (166)
                                  .|+.|++.|.....|..|++.|++++||.|+.|++.|.....|..|++. |.++.++.|+.|++.|..
T Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~f~~  173 (190)
T 2i13_A           95 AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT-HTGEKPYKCPECGKSFSR  173 (190)
T ss_dssp             HHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHCCCCEECTTTCCEESS
T ss_pred             HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHh-cCCCCCeECCCCCCccCC
Confidence                        7999999999999999999999999999999999999999999999986 677789999999999987


Q ss_pred             hccc
Q psy16925        161 GKMK  164 (166)
Q Consensus       161 ~~~~  164 (166)
                      ...+
T Consensus       174 ~~~L  177 (190)
T 2i13_A          174 RDAL  177 (190)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=2.2e-27  Score=161.73  Aligned_cols=130  Identities=30%  Similarity=0.650  Sum_probs=115.6

Q ss_pred             CCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCcccccc-----
Q psy16925         18 STLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKL-----   92 (166)
Q Consensus        18 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~-----   92 (166)
                      .....|.|+.|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|...     
T Consensus        45 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  123 (190)
T 2i13_A           45 TGEKPYKCPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA  123 (190)
T ss_dssp             ---CCEECTTTCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCCCccCCCcCchhCCHHHHHHHHH-hcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHH
Confidence            34567999999999999999999997 799999999999999999999999999999999999999999999653     


Q ss_pred             -----------ccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHH
Q psy16925         93 -----------SNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus        93 -----------~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                                 .|+.|++.|.....|..|++.|++++||.|+.|++.|.....|..|++. |.|+.||
T Consensus       124 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~k~~  190 (190)
T 2i13_A          124 HQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT-HTGKKTS  190 (190)
T ss_dssp             HHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTT-C------
T ss_pred             HHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHh-cCCCCCC
Confidence                       7999999999999999999999999999999999999999999999986 6776653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.93  E-value=4e-27  Score=160.41  Aligned_cols=142  Identities=25%  Similarity=0.406  Sum_probs=126.9

Q ss_pred             CCCCccch--hhhhhhcCChHHHHHHHHHhhcCCCCeec--ccchhhcCChHHHHHHHhHcCCCCCccCC--cCCccccc
Q psy16925         18 STLGKYSL--ALMVTRFSSRSAVTAHTKAVHLGERPFVC--HECGQSFASKGILQEHLTIHSDDAPWKCD--ICSKKSLK   91 (166)
Q Consensus        18 ~~~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~--~C~~~~~~   91 (166)
                      .....|.|  +.|++.|.+...|..|++ .|.++++|.|  ..|++.|.....|..|++.|.++++|.|.  .|++.|..
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHH-HHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHH-hcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            34567999  789999999999999997 7999999999  88999999999999999999999999999  89998854


Q ss_pred             c------------------cc--ccCCCcCCCchhHHHHhhhhcCCCCcccCc--ccccccCChhhhhhhhhhcchhHHH
Q psy16925         92 L------------------SN--VSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus        92 ~------------------~c--~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                      .                  .|  ..|++.|...+.|..|+++|++++||.|+.  |++.|...+.|..|++. |.+   +
T Consensus        87 ~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~-H~~---~  162 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG---Y  162 (190)
T ss_dssp             HHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS-SCS---C
T ss_pred             HHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH-hCC---C
Confidence            2                  66  889999999999999999999999999988  99999999999999986 555   7


Q ss_pred             HHHH---hhhhhhhhccc
Q psy16925        150 YESS---LGKIFLYGKMK  164 (166)
Q Consensus       150 ~c~~---c~~~f~~~~~~  164 (166)
                      .|..   |++.|.....+
T Consensus       163 ~C~~~~~C~~~f~~~~~l  180 (190)
T 1tf6_A          163 PCKKDDSCSFVGKTWTLY  180 (190)
T ss_dssp             CCCSTTTCCCCCSCHHHH
T ss_pred             cCCCCCcCCCccccHHHH
Confidence            7888   99999876543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.6e-25  Score=142.37  Aligned_cols=116  Identities=28%  Similarity=0.560  Sum_probs=105.1

Q ss_pred             CCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhH---cCCCCCccCCcCCcccccccc
Q psy16925         18 STLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTI---HSDDAPWKCDICSKKSLKLSN   94 (166)
Q Consensus        18 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~---h~~~~~~~c~~C~~~~~~~~c   94 (166)
                      +....|.|.+|++.|.....|..|++ .|.++++|.|..|++.|.....|..|+..   +.++++|.|+.|++.|     
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f-----   76 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF-----   76 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHH-HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEE-----
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHH-hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCcc-----
Confidence            34567999999999999999999997 79999999999999999999999999885   5677888888766555     


Q ss_pred             ccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925         95 VSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus        95 ~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                             .....|..|++.|++++||.|++|++.|.....|..|++.+|.++
T Consensus        77 -------~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           77 -------RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             -------SSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             -------CCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence                   788999999999999999999999999999999999999888875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.9e-26  Score=151.29  Aligned_cols=133  Identities=26%  Similarity=0.454  Sum_probs=115.9

Q ss_pred             ccchhhhhhhcCChHHHHHHHHH--hhcCCCCeecccc-----hhhcCChHHHHHHHhHcCCCCCccCCcCCcccccccc
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKA--VHLGERPFVCHEC-----GQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSN   94 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~--~h~~~~~~~C~~C-----~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c   94 (166)
                      .|.|+.|++.|.+...|..|++.  .|.++++|.|.+|     ++.|.....|..|++.|.++++|.|+.          
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~----------   72 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF----------   72 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCS----------
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCC----------
Confidence            58899999999999999999975  5778899998753     489999999999999999999999974          


Q ss_pred             ccCCCcCCCchhHHHHhhhhcCCCCcccCc--ccccccCChhhhhhhhhhcchhHHHHHHH--hhhhhhhhccc
Q psy16925         95 VSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPEELKLYESS--LGKIFLYGKMK  164 (166)
Q Consensus        95 ~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~--c~~~f~~~~~~  164 (166)
                      ..|++.|.....|..|++.|++++||.|+.  |++.|.....|..|++..|.++.++.|..  |++.|.....+
T Consensus        73 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L  146 (155)
T 2gli_A           73 EGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSL  146 (155)
T ss_dssp             TTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHH
T ss_pred             CCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHH
Confidence            124455588899999999999999999998  99999999999999966789998999988  99999876544

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=1.1e-26  Score=149.56  Aligned_cols=100  Identities=15%  Similarity=0.252  Sum_probs=70.1

Q ss_pred             CCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCC
Q psy16925         19 TLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCG   98 (166)
Q Consensus        19 ~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~   98 (166)
                      ....|.|++|+++|.....|..|++ .|++++||.|..|++.|.....|..|++.|++++||.|+.|++.|         
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F---------   88 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSF---------   88 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEE---------
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCc---------
Confidence            3455777777777777777777776 677777777777777777777777777777777777776655444         


Q ss_pred             CcCCCchhHHHHhhhhcCCC------CcccCcccccccC
Q psy16925         99 WYPDESKDLKNHHNLHTGKR------PYTCPWCSRTFAN  131 (166)
Q Consensus        99 ~~f~~~~~l~~H~~~h~~~~------p~~C~~C~~~f~~  131 (166)
                         ...+.|..|+++|++++      +|+|..|++.|..
T Consensus        89 ---~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           89 ---INYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             ---SSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             ---CCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence               66677777777766543      3667777766653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=1.9e-24  Score=136.51  Aligned_cols=111  Identities=30%  Similarity=0.665  Sum_probs=102.1

Q ss_pred             CCCCccchhh--hhhhcCChHHHHHHHHHhhcCCCCeecc--cchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccc
Q psy16925         18 STLGKYSLAL--MVTRFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLS   93 (166)
Q Consensus        18 ~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~   93 (166)
                      +....|.|.+  |++.|.+...|..|++ .|.++++|.|.  .|++.|.....|..|++.|.++++|.|+.|++.|    
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f----   76 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF----   76 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE----
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHH-hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchh----
Confidence            3456799997  9999999999999998 79999999999  7999999999999999999999999998866655    


Q ss_pred             cccCCCcCCCchhHHHHhhhhcCCCCccc--CcccccccCChhhhhhhhh
Q psy16925         94 NVSCGWYPDESKDLKNHHNLHTGKRPYTC--PWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus        94 c~~c~~~f~~~~~l~~H~~~h~~~~p~~C--~~C~~~f~~~~~l~~H~~~  141 (166)
                              .....|..|++.|++++||.|  +.|++.|.....|..|++.
T Consensus        77 --------~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           77 --------SRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             --------SCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             --------CCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence                    788899999999999999999  8999999999999999885

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=1.6e-24  Score=142.98  Aligned_cols=119  Identities=29%  Similarity=0.518  Sum_probs=105.9

Q ss_pred             CCccchhhhhhhcCChHHHHHHHHHhhcCCCC--------eecccchhhcCChHHHHHHHhHcCCCCCccCCc--CCccc
Q psy16925         20 LGKYSLALMVTRFSSRSAVTAHTKAVHLGERP--------FVCHECGQSFASKGILQEHLTIHSDDAPWKCDI--CSKKS   89 (166)
Q Consensus        20 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~--------~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~   89 (166)
                      ...|.|..|++.|.+...|..|++..|.++.+        |.|..|++.|.....|..|++.|.++++|.|..  |++. 
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-  101 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI-  101 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE-
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc-
Confidence            45699999999999999999999855887665        799999999999999999999999999999986  6555 


Q ss_pred             cccccccCCCcCCCchhHHHHhhhhcCCCCcccCc--ccccccCChhhhhhhhhhcchhHHHHH
Q psy16925         90 LKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus        90 ~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                                 |.....|..|++.|++++||.|+.  |++.|.....|..|++. |.++.+|.|
T Consensus       102 -----------f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~~~c  153 (155)
T 2rpc_A          102 -----------FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV-HTSDKSGPS  153 (155)
T ss_dssp             -----------ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT-TTSCCCSCS
T ss_pred             -----------cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH-hcCCCCCCC
Confidence                       478899999999999999999997  99999999999999986 667767655

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=1.2e-23  Score=133.86  Aligned_cols=115  Identities=32%  Similarity=0.661  Sum_probs=98.8

Q ss_pred             Cccchh--hhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCC
Q psy16925         21 GKYSLA--LMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCG   98 (166)
Q Consensus        21 ~~~~C~--~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~   98 (166)
                      ..|.|+  .|++.|.+...|..|++ .| ++++|.|..|++.|.....|..|++.|.++++|.|..          ..|+
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------~~C~   71 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLH-TH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF----------EGCG   71 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHG-GG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCS----------TTCC
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHH-Hc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCC----------CCCc
Confidence            468999  89999999999999987 67 8899999999999999999999999999999999974          1244


Q ss_pred             CcCCCchhHHHHhhhhcCCCCcccC--cccccccCChhhhhhhhhhcchhHH
Q psy16925         99 WYPDESKDLKNHHNLHTGKRPYTCP--WCSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus        99 ~~f~~~~~l~~H~~~h~~~~p~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                      +.|.....|..|++.|++++||.|+  .|++.|...+.|..|++. |.++.+
T Consensus        72 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-H~~~k~  122 (124)
T 1ubd_C           72 KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT-HAKAKN  122 (124)
T ss_dssp             CEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHH-HC----
T ss_pred             CccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHH-Hccccc
Confidence            4558889999999999999999996  599999999999999997 444443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=2.7e-23  Score=133.74  Aligned_cols=108  Identities=24%  Similarity=0.433  Sum_probs=95.9

Q ss_pred             HHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCc
Q psy16925         41 HTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPY  120 (166)
Q Consensus        41 H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~  120 (166)
                      |.+.+|.|+++|.|.+|++.|.....|..|++.|+++++|.|+.|++.|            ...+.|..|+++|++++||
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F------------~~~~~L~~H~~~H~~~k~~   79 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVF------------PLAEYRTKHEIHHTGERRY   79 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEE------------SSHHHHHHHHHHHHTCCCE
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeec------------ccccchhhhccccCCCccc
Confidence            3345788999999999999999999999999999999999998866655            7888999999999999999


Q ss_pred             ccCcccccccCChhhhhhhhhhcchh-----HHHHHHHhhhhhhh
Q psy16925        121 TCPWCSRTFANGSNCRSHKRRMHPEE-----LKLYESSLGKIFLY  160 (166)
Q Consensus       121 ~C~~C~~~f~~~~~l~~H~~~~h~~~-----~~~~c~~c~~~f~~  160 (166)
                      .|++|++.|...+.|..|++.+|.++     .++.|..|++.|+.
T Consensus        80 ~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           80 QCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             EESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             cCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            99999999999999999999888543     45778999988864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=7.2e-22  Score=130.10  Aligned_cols=112  Identities=26%  Similarity=0.622  Sum_probs=99.2

Q ss_pred             CCCccchhh-----hhhhcCChHHHHHHHHHhhcCCCCeeccc--chhhcCChHHHHHHHhHcCCCCCccCCc--CCccc
Q psy16925         19 TLGKYSLAL-----MVTRFSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDI--CSKKS   89 (166)
Q Consensus        19 ~~~~~~C~~-----C~~~~~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~   89 (166)
                      ....|.|..     |++.|.+...|..|++ .|.++++|.|++  |++.|.....|..|++.|.++++|.|+.  |++.|
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  109 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAF  109 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTH-HHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEE
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHH-hcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCcc
Confidence            345577664     4589999999999987 799999999986  9999999999999999999999999987  55554


Q ss_pred             cccccccCCCcCCCchhHHHHh-hhhcCCCCcccCc--ccccccCChhhhhhhhhhc
Q psy16925         90 LKLSNVSCGWYPDESKDLKNHH-NLHTGKRPYTCPW--CSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus        90 ~~~~c~~c~~~f~~~~~l~~H~-~~h~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h  143 (166)
                                  ...+.|..|+ +.|++++||.|+.  |++.|.....|..|++.+|
T Consensus       110 ------------~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          110 ------------SNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             ------------SSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             ------------CCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence                        7888899998 8999999999988  9999999999999999866

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.85  E-value=1.1e-21  Score=133.48  Aligned_cols=122  Identities=25%  Similarity=0.407  Sum_probs=108.7

Q ss_pred             CCCccch--hhhhhhcCChHHHHHHHHHhhcCCCCeecc--cchhhcCChHHHHHHH-hHc-CCCCCccC--CcCCcccc
Q psy16925         19 TLGKYSL--ALMVTRFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHL-TIH-SDDAPWKC--DICSKKSL   90 (166)
Q Consensus        19 ~~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~-~~h-~~~~~~~c--~~C~~~~~   90 (166)
                      ....|.|  ..|++.|.+...|..|++ .|.++++|.|.  .|++.|.+...|..|+ +.| .++.+|.|  ..|++.|.
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~  117 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFK  117 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHHT-TTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECS
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHHH-HccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccC
Confidence            3456899  889999999999999987 79999999999  8999999999999998 667 46789999  88999996


Q ss_pred             cc----------------cccc--CCCcCCCchhHHHHhhhhcCCCCcccCc---ccccccCChhhhhhhhhhcc
Q psy16925         91 KL----------------SNVS--CGWYPDESKDLKNHHNLHTGKRPYTCPW---CSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus        91 ~~----------------~c~~--c~~~f~~~~~l~~H~~~h~~~~p~~C~~---C~~~f~~~~~l~~H~~~~h~  144 (166)
                      ..                .|+.  |++.|...+.|..|+++|++   |.|+.   |++.|.....|..|++.||.
T Consensus       118 ~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          118 KHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             SHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            53                8877  99999999999999999988   89999   99999999999999997653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.84  E-value=1.7e-22  Score=127.46  Aligned_cols=105  Identities=30%  Similarity=0.601  Sum_probs=94.2

Q ss_pred             cCCCCeeccc--chhhcCChHHHHHHHhHcCCCCCccCC--cCCccccccccccCCCcCCCchhHHHHhhhhcCCCCccc
Q psy16925         47 LGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCD--ICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC  122 (166)
Q Consensus        47 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C  122 (166)
                      +++++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++            .|.....|..|++.|++++||.|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~------------~f~~~~~l~~H~~~h~~~~~~~C   69 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCER------------RFSRSDQLKRHQRRHTGVKPFQC   69 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCC------------EESSHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcC------------ccCCHHHHHHHHHHcCCCCCccC
Confidence            4688999997  999999999999999999999999998  4554            55888999999999999999999


Q ss_pred             CcccccccCChhhhhhhhhhcchhHHHHH--HHhhhhhhhhccc
Q psy16925        123 PWCSRTFANGSNCRSHKRRMHPEELKLYE--SSLGKIFLYGKMK  164 (166)
Q Consensus       123 ~~C~~~f~~~~~l~~H~~~~h~~~~~~~c--~~c~~~f~~~~~~  164 (166)
                      +.|++.|.....|..|++. |.++.++.|  +.||+.|.....+
T Consensus        70 ~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~L  112 (119)
T 2jp9_A           70 KTCQRKFSRSDHLKTHTRT-HTGEKPFSCRWPSCQKKFARSDEL  112 (119)
T ss_dssp             TTTCCEESCHHHHHHHHHH-HHTCCCEECCSTTCCCEESSHHHH
T ss_pred             CccCchhCCHHHHHHHHHH-hcCCCCeeCCCCCCccccCCHHHH
Confidence            9999999999999999986 777789999  8999999876543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=3.3e-22  Score=126.92  Aligned_cols=105  Identities=27%  Similarity=0.439  Sum_probs=93.5

Q ss_pred             cCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhh---hcCCCCcccC
Q psy16925         47 LGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNL---HTGKRPYTCP  123 (166)
Q Consensus        47 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~---h~~~~p~~C~  123 (166)
                      +++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|            .....|..|+..   +.++++|.|+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~l~~H~~~~~~~~~~~~~~C~   70 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCY------------FRKENLLEHEARNCMNRSEQVFTCS   70 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBC------------SSHHHHHHHHHHCCCCSCCCCEECS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchh------------cCHHHHHHHHhhhhcCCCCCCeECC
Confidence            5678999999999999999999999999999999998866555            788899999985   5788999999


Q ss_pred             cccccccCChhhhhhhhhhcchhHHHHHHHhhhhhhhhccc
Q psy16925        124 WCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMK  164 (166)
Q Consensus       124 ~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~f~~~~~~  164 (166)
                      +|++.|.....|..|++. |.++.++.|..|++.|.....+
T Consensus        71 ~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l  110 (124)
T 2dlq_A           71 VCQETFRRRMELRLHMVS-HTGEMPYKCSSCSQQFMQKKDL  110 (124)
T ss_dssp             SSCCEESSHHHHHHHHHH-HSSSCSEECSSSCCEESSHHHH
T ss_pred             CCCCccCCHHHHHHHHHH-cCCCCCccCCCccchhCCHHHH
Confidence            999999999999999986 6677899999999999876543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=6.6e-20  Score=111.13  Aligned_cols=88  Identities=25%  Similarity=0.607  Sum_probs=74.9

Q ss_pred             cCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCC--CCcccCc
Q psy16925         47 LGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGK--RPYTCPW  124 (166)
Q Consensus        47 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~--~p~~C~~  124 (166)
                      +++++|.|..|++.|.....|..|++.|.++++|.|..|++.|            .....|..|++.|+++  +||.|+.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~l~~H~~~h~~~~~~~~~C~~   70 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF------------KRKDRMSYHVRSHDGSVGKPYICQS   70 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEE------------SCHHHHHHHHHHHCCCCCSSBCCSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCcc------------CCHHHHHHHHHHhcCCCCCceECCC
Confidence            4678899999999999999999998888888888888766554            7788899999988886  8999999


Q ss_pred             ccccccCChhhhhhhhhhcchh
Q psy16925        125 CSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       125 C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      |++.|.....|..|++..|+++
T Consensus        71 C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           71 CGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SCCCBSSHHHHHHHHHHTSCCC
T ss_pred             ccchhCCHHHHHHHHHHhcCCC
Confidence            9999999999999987678764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=2.8e-20  Score=112.95  Aligned_cols=85  Identities=29%  Similarity=0.652  Sum_probs=51.5

Q ss_pred             cCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccc
Q psy16925         47 LGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS  126 (166)
Q Consensus        47 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~  126 (166)
                      .++++|.|..|++.|.....|..|++.|.++++|.|..|++.|            .....|..|++.|++++||.|++|+
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~l~~H~~~h~~~~~~~C~~C~   71 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAA------------ADSSSLNKHLRIHSDERPFKCQICP   71 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEE------------SSHHHHHHHHHHSCCCCCEECSSSS
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCcc------------CCHHHHHHHHHHhCCCCCccCCCCC
Confidence            3455666666666666666666666666666666655544333            4555566666666666666666666


Q ss_pred             ccccCChhhhhhhhhhc
Q psy16925        127 RTFANGSNCRSHKRRMH  143 (166)
Q Consensus       127 ~~f~~~~~l~~H~~~~h  143 (166)
                      +.|.....|..|++.|+
T Consensus        72 ~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A           72 YASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             CEESSHHHHHHHHTTCC
T ss_pred             CccCCHHHHHHHHHHhc
Confidence            66666666666666543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=3.5e-21  Score=120.85  Aligned_cols=101  Identities=15%  Similarity=0.279  Sum_probs=84.3

Q ss_pred             hHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhH--cCCCCCcc-CCcCCccccccccccCCCcCCCchhHHHHh
Q psy16925         35 RSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTI--HSDDAPWK-CDICSKKSLKLSNVSCGWYPDESKDLKNHH  111 (166)
Q Consensus        35 ~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~--h~~~~~~~-c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~  111 (166)
                      ...|..|++ .|+++++|.|..|++.|.....|..|++.  |.+++++. |..|++.|          .|.....|..|+
T Consensus         4 ~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f----------~f~~~~~l~~H~   72 (115)
T 2dmi_A            4 GSSGKLYGS-IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW----------SKPRKRSLLEME   72 (115)
T ss_dssp             CCCCCCCCC-CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCC----------SSCCCCCCCCCC
T ss_pred             chhhhhhee-eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCccc----------ccccHHHHHHHh
Confidence            345677876 79999999999999999999999999998  66666544 76665544          126777889999


Q ss_pred             hhhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        112 NLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       112 ~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +.|++++||.|++|++.|.....|..|++.+|..+
T Consensus        73 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           73 GKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             hccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999877653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.80  E-value=1.2e-20  Score=119.89  Aligned_cols=103  Identities=28%  Similarity=0.536  Sum_probs=89.2

Q ss_pred             CCCCeecc--cchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCc-
Q psy16925         48 GERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW-  124 (166)
Q Consensus        48 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~-  124 (166)
                      ++++|.|+  .|++.|.+...|..|++.| ++++|.|..|++.|            .....|..|++.|++++||.|+. 
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f------------~~~~~l~~H~~~h~~~~~~~C~~~   68 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAF------------VESSKLKRHQLVHTGEKPFQCTFE   68 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEE------------SSHHHHHHHGGGTSCCCCEECCST
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchh------------CCHHHHHHHHHHcCCCCCeeCCCC
Confidence            36789999  8999999999999999999 78889988766555            78889999999999999999986 


Q ss_pred             -ccccccCChhhhhhhhhhcchhHHHHHH--Hhhhhhhhhccc
Q psy16925        125 -CSRTFANGSNCRSHKRRMHPEELKLYES--SLGKIFLYGKMK  164 (166)
Q Consensus       125 -C~~~f~~~~~l~~H~~~~h~~~~~~~c~--~c~~~f~~~~~~  164 (166)
                       |++.|.....|..|++. |.++.++.|+  .|++.|.....+
T Consensus        69 ~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~L  110 (124)
T 1ubd_C           69 GCGKRFSLDFNLRTHVRI-HTGDRPYVCPFDGCNKKFAQSTNL  110 (124)
T ss_dssp             TCCCEESCHHHHHHHHHH-HHCCCCCCCCSTTCCCCCSSTTTT
T ss_pred             CCcCccCCHHHHHHHHHH-hCCCCceECCCCCCCCccCCHHHH
Confidence             99999999999999986 6777799995  699999887654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=1e-19  Score=113.20  Aligned_cols=89  Identities=28%  Similarity=0.642  Sum_probs=80.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW  124 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~  124 (166)
                      .|+++++|.| .|++.|.....|..|++.|.++++|.|..|++.|            .....|..|++.|++++||.|+.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~l~~H~~~h~~~~~~~C~~   70 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKF------------KMKHHLVGHMKIHTGIKPYECNI   70 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEE------------SSSHHHHHHHTTTCCCCCEECSS
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCccc------------CCHHHHHHHHHHcCCCCCeeCCC
Confidence            5788999999 8999999999999999999999999998866655            78888999999999999999999


Q ss_pred             ccccccCChhhhhhhhhhcchh
Q psy16925        125 CSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       125 C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      |++.|.....|..|++.+|.+.
T Consensus        71 C~~~f~~~~~l~~H~~~~~~~~   92 (110)
T 2csh_A           71 CAKRFMWRDSFHRHVTSCTKSY   92 (110)
T ss_dssp             SCCEESCHHHHHHHHHHHHHHH
T ss_pred             CcchhcCHHHHHHHHHHccccc
Confidence            9999999999999999877643

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.79  E-value=9.1e-20  Score=109.37  Aligned_cols=86  Identities=34%  Similarity=0.820  Sum_probs=71.9

Q ss_pred             CCCCeecc--cchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         48 GERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        48 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ++++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|            .....|..|++.|++++||.|+.|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~l~~H~~~h~~~~~~~C~~C   68 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNF------------SRSDHLTTHIRTHTGEKPFACDIC   68 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE------------SCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCccc------------CCHHHHHHHHHHcCCCCCccCCCC
Confidence            36789998  5999999999999999999888888888766555            778889999999999999999999


Q ss_pred             cccccCChhhhhhhhhhcchh
Q psy16925        126 SRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       126 ~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      ++.|...+.|..|++. |.++
T Consensus        69 ~~~f~~~~~l~~H~~~-H~~~   88 (90)
T 1a1h_A           69 GRKFARSDERKRHTKI-HLRQ   88 (90)
T ss_dssp             CCEESSHHHHHHHHGG-GGC-
T ss_pred             CchhCCHHHHHHHHHH-hccc
Confidence            9999999999999886 4444

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=3.8e-19  Score=109.88  Aligned_cols=89  Identities=28%  Similarity=0.547  Sum_probs=53.3

Q ss_pred             CCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCC
Q psy16925         20 LGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGW   99 (166)
Q Consensus        20 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~   99 (166)
                      ...|.|.+|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|          
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f----------   83 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF----------   83 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHH-HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCC----------
T ss_pred             CcCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcc----------
Confidence            344666666666666666666655 466666666666666666666666666666666666655544333          


Q ss_pred             cCCCchhHHHHhhhhcCCCCcc
Q psy16925        100 YPDESKDLKNHHNLHTGKRPYT  121 (166)
Q Consensus       100 ~f~~~~~l~~H~~~h~~~~p~~  121 (166)
                        .....|..|++.|++++||.
T Consensus        84 --~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           84 --CQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             --SSHHHHHHHHHHTTSCCCCC
T ss_pred             --cCHHHHHHHHHHhCCCCCCc
Confidence              55555666666666665554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=4.8e-19  Score=109.44  Aligned_cols=89  Identities=28%  Similarity=0.660  Sum_probs=79.5

Q ss_pred             cCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccc
Q psy16925         47 LGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS  126 (166)
Q Consensus        47 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~  126 (166)
                      .++++|.|..|++.|.....|..|++.|.++++|.|..|++.|            .....|..|++.|++++||.|++|+
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~l~~H~~~h~~~~~~~C~~C~   80 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAF------------RRQDHLRDHRYIHSKEKPFKCQECG   80 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBC------------SCHHHHHHHGGGSCCCCTTSCSSSC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchh------------CCHHHHHHHHHHhCCCCCeECCCcC
Confidence            4578899999999999999999999999999999998866554            7888999999999999999999999


Q ss_pred             ccccCChhhhhhhhhhcchhHH
Q psy16925        127 RTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus       127 ~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                      +.|.....|..|++. |.++.+
T Consensus        81 ~~f~~~~~L~~H~~~-H~~~~~  101 (106)
T 2ee8_A           81 KGFCQSRTLAVHKTL-HMQTSS  101 (106)
T ss_dssp             CCCSSHHHHHHHHHH-TTSCCC
T ss_pred             CcccCHHHHHHHHHH-hCCCCC
Confidence            999999999999986 555433

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=2.1e-19  Score=105.91  Aligned_cols=80  Identities=39%  Similarity=0.839  Sum_probs=64.9

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccccccc
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFA  130 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~  130 (166)
                      ||.|..|++.|.....|..|++.|.++++|.|..|++.|            .....|..|++.|++++||.|+.|++.|.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   68 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF------------HQKSDMKKHTFIHTGEKPHKCQVCGKAFS   68 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEE------------SSHHHHHHHHHHHHTCCCEECTTTSCEES
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhh------------CCHHHHHHHHHHhcCCCCCcCCCcchhhC
Confidence            577888888888888888888888888888877755544            67778888888888888888888888888


Q ss_pred             CChhhhhhhhhh
Q psy16925        131 NGSNCRSHKRRM  142 (166)
Q Consensus       131 ~~~~l~~H~~~~  142 (166)
                      ..+.|..|++.|
T Consensus        69 ~~~~l~~H~~~H   80 (82)
T 2kmk_A           69 QSSNLITHSRKH   80 (82)
T ss_dssp             SHHHHHHHHHHH
T ss_pred             ChHHHHHHHHhh
Confidence            888888888764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.2e-18  Score=105.72  Aligned_cols=91  Identities=32%  Similarity=0.595  Sum_probs=82.2

Q ss_pred             CCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCcccccccccc
Q psy16925         17 ASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVS   96 (166)
Q Consensus        17 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~   96 (166)
                      ++..+.|.|.+|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|       
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-------   74 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYAS-------   74 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEE-------
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCcc-------
Confidence            355677999999999999999999997 799999999999999999999999999999999999998866655       


Q ss_pred             CCCcCCCchhHHHHhhhhcCCCCc
Q psy16925         97 CGWYPDESKDLKNHHNLHTGKRPY  120 (166)
Q Consensus        97 c~~~f~~~~~l~~H~~~h~~~~p~  120 (166)
                           .....|..|+++|+++++.
T Consensus        75 -----~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           75 -----RNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             -----SSHHHHHHHHTTCCSCCCC
T ss_pred             -----CCHHHHHHHHHHhcCCCCC
Confidence                 7889999999999988753

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=9.5e-20  Score=112.91  Aligned_cols=89  Identities=18%  Similarity=0.248  Sum_probs=49.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW  124 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~  124 (166)
                      .|+++++|.|..|++.|.....|..|++.|  .++|.|..|++            .|.....|..|++ |++++||.|++
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~------------~f~~~~~l~~H~~-H~~~~~~~C~~   74 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSL------------RFFSPELKQEHES-KCEYKKLTCLE   74 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCC------------CBSSHHHHHHHHH-HCSTGGGEEGG
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCC------------ccCCHHHHHHHHH-cCCCCCccCcc
Confidence            345555666666666666666666665555  24455544333            3345555666653 66666666666


Q ss_pred             ccccccCChhhhhhhhhhcchhHH
Q psy16925        125 CSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus       125 C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                      |++.|.....|..|++.+|.++.+
T Consensus        75 C~~~f~~~~~L~~H~~~~H~~~~~   98 (107)
T 1wjp_A           75 CMRTFKSSFSIWRHQVEVHNQNNM   98 (107)
T ss_dssp             GTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             ccchhCCHHHHHHHHHHHcCCCCC
Confidence            666666666666666544555443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.76  E-value=1.5e-19  Score=119.01  Aligned_cols=113  Identities=24%  Similarity=0.397  Sum_probs=93.2

Q ss_pred             cCCCCeecccchhhcCChHHHHHHHhH-cCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCc-
Q psy16925         47 LGERPFVCHECGQSFASKGILQEHLTI-HSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW-  124 (166)
Q Consensus        47 ~~~~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~-  124 (166)
                      ..+.+|.|..|++.|.+...|..|++. |.++.+.....|.    ...|..|++.|.....|..|++.|++++||.|+. 
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~----~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~   96 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY----WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFP   96 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCC----BTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCT
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcccc----ccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcC
Confidence            356789999999999999999999987 7766553222221    1345667777899999999999999999999998 


Q ss_pred             -ccccccCChhhhhhhhhhcchhHHHHHHH--hhhhhhhhccc
Q psy16925        125 -CSRTFANGSNCRSHKRRMHPEELKLYESS--LGKIFLYGKMK  164 (166)
Q Consensus       125 -C~~~f~~~~~l~~H~~~~h~~~~~~~c~~--c~~~f~~~~~~  164 (166)
                       |++.|.....|..|++. |.++.++.|..  |++.|.....+
T Consensus        97 ~C~~~f~~~~~L~~H~~~-h~~~~~~~C~~~~C~k~f~~~~~L  138 (155)
T 2rpc_A           97 GCGKIFARSENLKIHKRT-HTGEKPFKCEFEGCDRRFANSSDR  138 (155)
T ss_dssp             TTCCEESCHHHHHHHHTT-TCSSCSBCCSSTTCCCCBSSHHHH
T ss_pred             CCCCccCCHHHHHHHHHh-hCCCCCccCCCCCCCCccCCHHHH
Confidence             99999999999999985 77788999996  99999876543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=3e-18  Score=100.84  Aligned_cols=82  Identities=30%  Similarity=0.667  Sum_probs=74.7

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcC
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYP  101 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f  101 (166)
                      .|.|.+|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|            
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------   67 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAF------------   67 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEE------------
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhh------------
Confidence            3789999999999999999998 799999999999999999999999999999999999998866655            


Q ss_pred             CCchhHHHHhhhhcC
Q psy16925        102 DESKDLKNHHNLHTG  116 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~  116 (166)
                      ...+.|..|+++|+|
T Consensus        68 ~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           68 SQSSNLITHSRKHTG   82 (82)
T ss_dssp             SSHHHHHHHHHHHC-
T ss_pred             CChHHHHHHHHhhCC
Confidence            788999999999864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.1e-18  Score=105.48  Aligned_cols=97  Identities=20%  Similarity=0.280  Sum_probs=84.4

Q ss_pred             cCCcccCCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCcccc
Q psy16925         11 AAGFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSL   90 (166)
Q Consensus        11 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~   90 (166)
                      ..+.+.......|.|.+|++.|.....|..|++ .|  +++|.|..|++.|.....|..|+. |+++++|.|..|++.| 
T Consensus         5 ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f-   79 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHER-LC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTF-   79 (107)
T ss_dssp             CCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHH-HH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEEC-
T ss_pred             cccCcccCCCcCeECCCCCCccCCHHHHHHHHH-HC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchh-
Confidence            344556667778999999999999999999998 56  478999999999999999999996 9999999998866655 


Q ss_pred             ccccccCCCcCCCchhHHHHhh-hhcCCCCcccC
Q psy16925         91 KLSNVSCGWYPDESKDLKNHHN-LHTGKRPYTCP  123 (166)
Q Consensus        91 ~~~c~~c~~~f~~~~~l~~H~~-~h~~~~p~~C~  123 (166)
                                 .....|..|++ .|++++||.+.
T Consensus        80 -----------~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           80 -----------KSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             -----------SSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             -----------CCHHHHHHHHHHHcCCCCCCCCC
Confidence                       78899999997 89999999875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.72  E-value=7.8e-18  Score=100.62  Aligned_cols=84  Identities=32%  Similarity=0.778  Sum_probs=70.4

Q ss_pred             CCCeeccc--chhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccc
Q psy16925         49 ERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS  126 (166)
Q Consensus        49 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~  126 (166)
                      +.+|.|..  |++.|.....|..|++.|.++++|.|+.          ..|++.|.....|..|++.|++++||.|+.|+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   72 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW----------DGCGWKFARSDELTRHYRKHTGHRPFQCQKCD   72 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCS----------TTTCCEESSHHHHHHHHHHHHCCCCEECSSSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCC----------CCCCCccCCHHHHHHHHHHcCCCCCccCCCCC
Confidence            56788988  9999999999999999998888888862          12444557888899999999999999999999


Q ss_pred             ccccCChhhhhhhhhh
Q psy16925        127 RTFANGSNCRSHKRRM  142 (166)
Q Consensus       127 ~~f~~~~~l~~H~~~~  142 (166)
                      +.|...+.|..|++.|
T Consensus        73 ~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           73 RAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CEESSHHHHHHHGGGG
T ss_pred             cccCCHHHHHHHHHhh
Confidence            9999999999998863

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.72  E-value=5.5e-18  Score=101.51  Aligned_cols=85  Identities=31%  Similarity=0.693  Sum_probs=76.4

Q ss_pred             Cccchh--hhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCC
Q psy16925         21 GKYSLA--LMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCG   98 (166)
Q Consensus        21 ~~~~C~--~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~   98 (166)
                      ..|.|.  .|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|         
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f---------   72 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF---------   72 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE---------
T ss_pred             CceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchh---------
Confidence            468998  69999999999999997 799999999999999999999999999999999999998866655         


Q ss_pred             CcCCCchhHHHHhhhhcCCC
Q psy16925         99 WYPDESKDLKNHHNLHTGKR  118 (166)
Q Consensus        99 ~~f~~~~~l~~H~~~h~~~~  118 (166)
                         ...+.|..|+++|++++
T Consensus        73 ---~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           73 ---ARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             ---SSHHHHHHHHGGGGC--
T ss_pred             ---CCHHHHHHHHHHhcccC
Confidence               78899999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.71  E-value=2.6e-17  Score=100.44  Aligned_cols=84  Identities=30%  Similarity=0.708  Sum_probs=58.1

Q ss_pred             CCCeeccc--chhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccc
Q psy16925         49 ERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS  126 (166)
Q Consensus        49 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~  126 (166)
                      +++|.|..  |++.|.....|..|++.|.++++|.|..          ..|++.|.....|..|++.|++++||.|++|+
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   82 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW----------EGCDWRFARSDELTRHYRKHTGAKPFQCGVCN   82 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCS----------SSCCCEESSHHHHHHHHHHHTSCCSCBCSSSC
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCC----------CCCCCccCCHHHHHHHHHHhCCCCCeECCCCc
Confidence            45577765  7777777777777777777777777642          11333446667777777777777778887888


Q ss_pred             ccccCChhhhhhhhhh
Q psy16925        127 RTFANGSNCRSHKRRM  142 (166)
Q Consensus       127 ~~f~~~~~l~~H~~~~  142 (166)
                      +.|.....|..|++.|
T Consensus        83 ~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           83 RSFSRSDHLALHMKRH   98 (100)
T ss_dssp             CBCSSHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHh
Confidence            8888877887777754

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.5e-17  Score=99.59  Aligned_cols=87  Identities=25%  Similarity=0.505  Sum_probs=76.8

Q ss_pred             CCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCC--CCccCCcCCccccccccc
Q psy16925         18 STLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDD--APWKCDICSKKSLKLSNV   95 (166)
Q Consensus        18 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~--~~~~c~~C~~~~~~~~c~   95 (166)
                      +....|.|.+|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.++  ++|.|..|++.       
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~-------   74 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKG-------   74 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCC-------
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccch-------
Confidence            44567999999999999999999997 799999999999999999999999999999887  88998876655       


Q ss_pred             cCCCcCCCchhHHHHhh-hhcCC
Q psy16925         96 SCGWYPDESKDLKNHHN-LHTGK  117 (166)
Q Consensus        96 ~c~~~f~~~~~l~~H~~-~h~~~  117 (166)
                           |.....|..|++ .|.++
T Consensus        75 -----f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           75 -----FSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             -----BSSHHHHHHHHHHTSCCC
T ss_pred             -----hCCHHHHHHHHHHhcCCC
Confidence                 478899999986 67654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=1.6e-18  Score=103.63  Aligned_cols=83  Identities=23%  Similarity=0.509  Sum_probs=62.7

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccccc
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRT  128 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~  128 (166)
                      ++||.|..|++.|.....|..|++.|.++++|.|+.|++.|            .....|..|++.|++ .+|.|+.|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f------------~~~~~L~~H~~~h~~-~~~~c~~C~~~   67 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF------------ARSDERKRHRDIQHI-LPILEDKVEEL   67 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE------------SSHHHHHHHHHHHTH-HHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCcc------------CCHHHHHHHHHHhCC-CcchHHHHHHH
Confidence            46778888888888888888887777777777777655544            667777788777764 67888888888


Q ss_pred             ccCChhhhhhhhhhcc
Q psy16925        129 FANGSNCRSHKRRMHP  144 (166)
Q Consensus       129 f~~~~~l~~H~~~~h~  144 (166)
                      |.....|..|++.+|.
T Consensus        68 f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           68 LSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHH
Confidence            8888888888877664

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.68  E-value=1.6e-16  Score=96.88  Aligned_cols=90  Identities=23%  Similarity=0.461  Sum_probs=79.3

Q ss_pred             cccCCCCCccchhh--hhhhcCChHHHHHHHHHhhcCCCCeecc--cchhhcCChHHHHHHHhHcCCCCCccCCcCCccc
Q psy16925         14 FRNASTLGKYSLAL--MVTRFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKS   89 (166)
Q Consensus        14 ~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~   89 (166)
                      -.+......|.|..  |++.|.....|..|++ .|.++++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|
T Consensus         7 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   85 (100)
T 2ebt_A            7 GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSF   85 (100)
T ss_dssp             CCCCCSCCCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBC
T ss_pred             CcccccCcceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCcc
Confidence            34555667899997  9999999999999998 79999999996  5999999999999999999999999998866555


Q ss_pred             cccccccCCCcCCCchhHHHHhhhhcC
Q psy16925         90 LKLSNVSCGWYPDESKDLKNHHNLHTG  116 (166)
Q Consensus        90 ~~~~c~~c~~~f~~~~~l~~H~~~h~~  116 (166)
                                  .....|..|+++|++
T Consensus        86 ------------~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           86 ------------SRSDHLALHMKRHQN  100 (100)
T ss_dssp             ------------SSHHHHHHHHHHHCC
T ss_pred             ------------CCHHHHHHHHHHhCC
Confidence                        788999999998863

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=8.4e-17  Score=99.91  Aligned_cols=87  Identities=30%  Similarity=0.528  Sum_probs=78.0

Q ss_pred             cCCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccc
Q psy16925         16 NASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNV   95 (166)
Q Consensus        16 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~   95 (166)
                      ..+....|.| .|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.++++|.|+.|++.|      
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------   75 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRF------   75 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEE------
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchh------
Confidence            3455678999 99999999999999998 799999999999999999999999999999999999998866655      


Q ss_pred             cCCCcCCCchhHHHHhhhhcC
Q psy16925         96 SCGWYPDESKDLKNHHNLHTG  116 (166)
Q Consensus        96 ~c~~~f~~~~~l~~H~~~h~~  116 (166)
                            .....|..|++.|+.
T Consensus        76 ------~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           76 ------MWRDSFHRHVTSCTK   90 (110)
T ss_dssp             ------SCHHHHHHHHHHHHH
T ss_pred             ------cCHHHHHHHHHHccc
Confidence                  788899999998764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.68  E-value=4.4e-17  Score=90.12  Aligned_cols=43  Identities=30%  Similarity=0.667  Sum_probs=22.8

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      ...+.|..|+++|++++||.|++||++|...+.|..|++. |+|
T Consensus        15 ~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~-Htg   57 (60)
T 4gzn_C           15 RDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV-HQN   57 (60)
T ss_dssp             SSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG-GSC
T ss_pred             CCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc-cCC
Confidence            4444555555555555555555555555555555555543 444

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2e-16  Score=92.45  Aligned_cols=70  Identities=29%  Similarity=0.614  Sum_probs=40.5

Q ss_pred             CCCCeeccc--chhhcCChHHHHHHHh-HcCCCCCccCCc--CCccccccccccCCCcCCCchhHHHHhhhhcCCCCccc
Q psy16925         48 GERPFVCHE--CGQSFASKGILQEHLT-IHSDDAPWKCDI--CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC  122 (166)
Q Consensus        48 ~~~~~~C~~--C~~~f~~~~~l~~h~~-~h~~~~~~~c~~--C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C  122 (166)
                      ++++|.|..  |++.|.....|..|++ .|.++++|.|+.  |++.|            .....|..|+++|++++||.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f------------~~~~~L~~H~~~H~~~~~~~C   71 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSF------------NFKKHLKEHMKLHSDTRDYIC   71 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEE------------SSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCcc------------CCHHHHHHHHHHhCCCCCeeC
Confidence            445555554  6666666666666655 455556665554  33333            455556666666666666666


Q ss_pred             Ccccccc
Q psy16925        123 PWCSRTF  129 (166)
Q Consensus       123 ~~C~~~f  129 (166)
                      ++|++.|
T Consensus        72 ~~C~k~F   78 (79)
T 2dlk_A           72 EFSGPSS   78 (79)
T ss_dssp             CSSSCCC
T ss_pred             CCCCCCC
Confidence            6666655

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.65  E-value=9.6e-17  Score=88.73  Aligned_cols=55  Identities=27%  Similarity=0.626  Sum_probs=27.9

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +|.|.+|+++|.....|..|++ +|++++||.|.+|++.|.....|..|+++|+++
T Consensus         4 py~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            4 PFFCNFCGKTYRDASGLSRHRR-AHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CccCCCCCCEeCCHHHHHHHHH-HhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            3555555555555555555544 455555555555555555555555555555443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.64  E-value=1.5e-16  Score=94.09  Aligned_cols=78  Identities=29%  Similarity=0.614  Sum_probs=58.5

Q ss_pred             Ceec--ccchhhcCChHHHHHHHhHcCCCCCccCCc--CCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCc--
Q psy16925         51 PFVC--HECGQSFASKGILQEHLTIHSDDAPWKCDI--CSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW--  124 (166)
Q Consensus        51 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~--  124 (166)
                      ||.|  ..|++.|.....|..|++.|.++++|.|+.  |++.|            .....|..|++.|++   |.|+.  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f------------~~~~~l~~H~~~h~~---~~C~~~~   65 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF------------SLPSRLKRHEKVHAG---YPCKKDD   65 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEE------------SSHHHHHHHHHHHHS---EECCSCS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCcc------------CCHHHHHHHHHHhCC---CCCCCCC
Confidence            4677  777888877777777877777777777765  55444            667777888877776   78887  


Q ss_pred             -ccccccCChhhhhhhhhhc
Q psy16925        125 -CSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus       125 -C~~~f~~~~~l~~H~~~~h  143 (166)
                       |++.|.....|..|++.+|
T Consensus        66 ~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           66 SCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             SCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCccCCHHHHHHHHHhcC
Confidence             8888888888888877654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=1e-16  Score=100.28  Aligned_cols=95  Identities=15%  Similarity=0.159  Sum_probs=79.2

Q ss_pred             cCCCCCccchhhhhhhcCChHHHHHHHHHh--hcCCCCe-ecccchhhc--CChHHHHHHHhHcCCCCCccCCcCCcccc
Q psy16925         16 NASTLGKYSLALMVTRFSSRSAVTAHTKAV--HLGERPF-VCHECGQSF--ASKGILQEHLTIHSDDAPWKCDICSKKSL   90 (166)
Q Consensus        16 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~--h~~~~~~-~C~~C~~~f--~~~~~l~~h~~~h~~~~~~~c~~C~~~~~   90 (166)
                      .......|.|.+|++.|.....|..|++ .  |.+++++ .|..|++.|  .....|..|++.|+++++|.|..|++.| 
T Consensus        13 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f-   90 (115)
T 2dmi_A           13 IFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSF-   90 (115)
T ss_dssp             CCCCCCSEEBSSSSCEESSHHHHHHHHH-HTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBC-
T ss_pred             eeCCCCCEECCccCchhcCHHHHHHHHH-HhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCcc-
Confidence            3455677999999999999999999997 5  5556554 599999999  8999999999999999999998866555 


Q ss_pred             ccccccCCCcCCCchhHHHHhhhhcCCCCcccC
Q psy16925         91 KLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCP  123 (166)
Q Consensus        91 ~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~  123 (166)
                                 .....|..|++.|+.......+
T Consensus        91 -----------~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           91 -----------ESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             -----------SSHHHHHHHHHHTTTTTCSCCC
T ss_pred             -----------CCHHHHHHHHHHhCCcccCCCC
Confidence                       7889999999998776655544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=3.4e-16  Score=93.40  Aligned_cols=81  Identities=27%  Similarity=0.572  Sum_probs=73.9

Q ss_pred             Cccchhh--hhhhcCChHHHHHHHHHhhcCCCCeecc--cchhhcCChHHHHHHHhHcCCCCCccCCcCCcccccccccc
Q psy16925         21 GKYSLAL--MVTRFSSRSAVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVS   96 (166)
Q Consensus        21 ~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~   96 (166)
                      +.|.|+.  |++.|.....|..|++ .|.++++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|       
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-------   75 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAF-------   75 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEE-------
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCccc-------
Confidence            5699999  9999999999999997 79999999997  5999999999999999999999999998866655       


Q ss_pred             CCCcCCCchhHHHHhhhh
Q psy16925         97 CGWYPDESKDLKNHHNLH  114 (166)
Q Consensus        97 c~~~f~~~~~l~~H~~~h  114 (166)
                           ...+.|..|+++|
T Consensus        76 -----~~~~~l~~H~~~H   88 (89)
T 2wbs_A           76 -----SRSDHLALHMKRH   88 (89)
T ss_dssp             -----SSHHHHHHHGGGG
T ss_pred             -----CCHHHHHHHHHhh
Confidence                 7888999999887

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=5e-16  Score=90.69  Aligned_cols=72  Identities=32%  Similarity=0.563  Sum_probs=66.2

Q ss_pred             CCCCccchhh--hhhhcCChHHHHHHHHHhhcCCCCeeccc--chhhcCChHHHHHHHhHcCCCCCccCCcCCccc
Q psy16925         18 STLGKYSLAL--MVTRFSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSKKS   89 (166)
Q Consensus        18 ~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~   89 (166)
                      +....|.|..  |++.|.....|..|++..|.++++|.|..  |++.|.....|..|++.|+++++|.|..|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3455688887  99999999999999976799999999999  999999999999999999999999999999877

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.62  E-value=4.3e-16  Score=92.93  Aligned_cols=66  Identities=26%  Similarity=0.500  Sum_probs=58.6

Q ss_pred             CCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHHhhhhhhhhccc
Q psy16925         97 CGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGKMK  164 (166)
Q Consensus        97 c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~f~~~~~~  164 (166)
                      |++.|.....|..|++.|++++||.|+.|++.|.....|..|++.+|.  .++.|..|++.|.....+
T Consensus         9 C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            9 CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHL   74 (88)
T ss_dssp             TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhh
Confidence            445558899999999999999999999999999999999999998773  699999999999877543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=6.4e-16  Score=91.60  Aligned_cols=78  Identities=22%  Similarity=0.464  Sum_probs=55.7

Q ss_pred             HHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCC----CCccCCcCCccccccccccCCCcCCCchhHHHHhhhh
Q psy16925         39 TAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDD----APWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLH  114 (166)
Q Consensus        39 ~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~----~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h  114 (166)
                      ..|++ +|+++++|.|..|++.|.....|..|++.+..+    ++|.|..|++.            |.....|..|++.|
T Consensus         4 ~~H~~-~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~------------f~~~~~L~~H~~~h   70 (86)
T 1x6h_A            4 GSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKT------------FTRRNTMARHADNC   70 (86)
T ss_dssp             TCCST-TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCE------------ESCHHHHHHHHHHC
T ss_pred             ccccc-eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCCh------------hCCHHHHHHHHHHc
Confidence            34555 677788888888888888888888887665543    56776665444            46777788888888


Q ss_pred             cCCCCcccCcccccc
Q psy16925        115 TGKRPYTCPWCSRTF  129 (166)
Q Consensus       115 ~~~~p~~C~~C~~~f  129 (166)
                      ++++++.|..|+.+|
T Consensus        71 ~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           71 AGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCCSCCCCCCCCCC
T ss_pred             cCCCCcccCCCCCCC
Confidence            888888887777654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.4e-15  Score=86.77  Aligned_cols=59  Identities=31%  Similarity=0.662  Sum_probs=25.6

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCcc
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWK   81 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~   81 (166)
                      .|.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.....|..|++.|++++||.
T Consensus        18 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           18 RYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             SSBCSSSCCBCSCHHHHHHHHT-TTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             CEECCCCCcccCCHHHHHHHHH-HcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            3444444444444444444443 3444444444444444444444444444444444443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=6.3e-15  Score=85.61  Aligned_cols=66  Identities=35%  Similarity=0.701  Sum_probs=60.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCccc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC  122 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C  122 (166)
                      .+.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|            .....|..|+++|++++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF------------IQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEE------------SSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCcc------------CCHHHHHHHHHHhCCCCCCCC
Confidence            356789999999999999999999999999999999998866655            788999999999999999998

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=2.7e-15  Score=88.74  Aligned_cols=53  Identities=23%  Similarity=0.436  Sum_probs=45.2

Q ss_pred             ccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhH
Q psy16925         95 VSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL  147 (166)
Q Consensus        95 ~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~  147 (166)
                      +.|++.|.....|..|+++|++++||.|++|++.|.....|..|++..|++|+
T Consensus        32 ~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           32 PVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            33555558888999999999999999999999999999999999887888763

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=4.9e-15  Score=90.55  Aligned_cols=65  Identities=17%  Similarity=0.348  Sum_probs=31.2

Q ss_pred             CCCCeecccchhhcCChHHHHHHHh-Hc---CCCCCccCCcCCccccccccccCCCcCCCchhHHHH-hhhhcCCCCccc
Q psy16925         48 GERPFVCHECGQSFASKGILQEHLT-IH---SDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNH-HNLHTGKRPYTC  122 (166)
Q Consensus        48 ~~~~~~C~~C~~~f~~~~~l~~h~~-~h---~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H-~~~h~~~~p~~C  122 (166)
                      +++||.|..|++.|.....|..|++ .|   .+++||.|..|++.|            ...+.|..| +++|++++||.|
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F------------~~~~~L~~H~~r~Htgekpy~C   82 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT------------KRYDALSEHNLKYHPGEENFKL   82 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEE------------SSTHHHHTHHHHTSTTCCCEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCccc------------CCHHHHHHHHHHhcCCCCCeeC
Confidence            4445555555555555555555544 24   334445444433333            344445555 445555555555


Q ss_pred             Cc
Q psy16925        123 PW  124 (166)
Q Consensus       123 ~~  124 (166)
                      .+
T Consensus        83 ~~   84 (102)
T 2ghf_A           83 TM   84 (102)
T ss_dssp             EE
T ss_pred             Cc
Confidence            44

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.53  E-value=7.3e-15  Score=86.67  Aligned_cols=81  Identities=19%  Similarity=0.355  Sum_probs=69.5

Q ss_pred             ccch--hhhhhhcCChHHHHHHHHHhhcCCCCeeccc--chhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccC
Q psy16925         22 KYSL--ALMVTRFSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSC   97 (166)
Q Consensus        22 ~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c   97 (166)
                      .|.|  +.|++.|.....|..|++ .|.++++|.|+.  |++.|.....|..|++.|++   |.|..++         .|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~---------~C   67 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDD---------SC   67 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCS---------SC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCC---------CC
Confidence            3789  999999999999999987 799999999998  99999999999999999987   6776611         15


Q ss_pred             CCcCCCchhHHHHhhhhc
Q psy16925         98 GWYPDESKDLKNHHNLHT  115 (166)
Q Consensus        98 ~~~f~~~~~l~~H~~~h~  115 (166)
                      ++.|.....|..|++.|+
T Consensus        68 ~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           68 SFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CCEESSHHHHHHHHHHCC
T ss_pred             CCccCCHHHHHHHHHhcC
Confidence            555688899999998764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1.6e-14  Score=83.20  Aligned_cols=57  Identities=32%  Similarity=0.668  Sum_probs=26.0

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCC
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAP   79 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   79 (166)
                      .|.|..|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|++++|
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHH-HHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CeECCCCCceeCCHHHHHHHHH-HcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            3444444444444444444443 34444444444444444444444444444444433

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=1e-15  Score=97.63  Aligned_cols=81  Identities=17%  Similarity=0.333  Sum_probs=65.0

Q ss_pred             CCCeecccchhhcC------ChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCccc
Q psy16925         49 ERPFVCHECGQSFA------SKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTC  122 (166)
Q Consensus        49 ~~~~~C~~C~~~f~------~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C  122 (166)
                      ++.+.|..|.+.|.      ....|..|+ .|++++||.|..|++.|            .....|..|+++|  ++||.|
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f------------~~~~~l~~H~~~H--~~~~~C  103 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPF------------SSSVSLKQHIRYT--EHTKVC  103 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEE------------SSHHHHHHHHHHT--CCCCBC
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCccc------------CCHhHHHHHHHHC--CCCCCC
Confidence            45577888877766      455566665 57788999998866655            7788899999998  889999


Q ss_pred             CcccccccCChhhhhhhhhhcc
Q psy16925        123 PWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       123 ~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      +.|++.|...+.|..|++.+|.
T Consensus       104 ~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A          104 PVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             TTTCCBCSSHHHHHHHHHHTTC
T ss_pred             CCCCcccCCHHHHHHHHHHHCC
Confidence            9999999999999999987664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=7.1e-15  Score=89.85  Aligned_cols=72  Identities=22%  Similarity=0.353  Sum_probs=64.2

Q ss_pred             ccCCCCCccchhhhhhhcCChHHHHHHHHHhh---cCCCCeecccchhhcCChHHHHHH-HhHcCCCCCccCCcCC
Q psy16925         15 RNASTLGKYSLALMVTRFSSRSAVTAHTKAVH---LGERPFVCHECGQSFASKGILQEH-LTIHSDDAPWKCDICS   86 (166)
Q Consensus        15 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h---~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~~~~~~~c~~C~   86 (166)
                      .+-.....|.|.+|++.|.....|..|++..|   .+++||.|..|++.|.....|..| ++.|++++||.|..+.
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            35556677999999999999999999987568   668999999999999999999999 8999999999998744

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=5.8e-16  Score=90.09  Aligned_cols=68  Identities=28%  Similarity=0.499  Sum_probs=47.2

Q ss_pred             HHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhh-hhcCC-CCcccCcccccccCChhhhhhhhhhcch
Q psy16925         68 QEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHN-LHTGK-RPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus        68 ~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~-~h~~~-~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      .+|++.|+++++|.|..|++.|            .....|..|++ .|.++ +||.|+.|++.|.....|..|++.+|.+
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f------------~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARF------------TQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEE------------SCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CccccccCCCCCeECCCcCchh------------CCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            3456667777777776655444            56667777775 45553 6788888888888888888888877766


Q ss_pred             hH
Q psy16925        146 EL  147 (166)
Q Consensus       146 ~~  147 (166)
                      +.
T Consensus        72 ~~   73 (77)
T 2ct1_A           72 SG   73 (77)
T ss_dssp             SC
T ss_pred             CC
Confidence            54

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.7e-15  Score=92.21  Aligned_cols=72  Identities=17%  Similarity=0.296  Sum_probs=39.4

Q ss_pred             HHHHHHHHHhhcCCCCeecccchhhcC-ChHHHHHHHhHcCC-CCCccCCcCCccccccccccCCCcCCCchhHHHHhhh
Q psy16925         36 SAVTAHTKAVHLGERPFVCHECGQSFA-SKGILQEHLTIHSD-DAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNL  113 (166)
Q Consensus        36 ~~l~~H~~~~h~~~~~~~C~~C~~~f~-~~~~l~~h~~~h~~-~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~  113 (166)
                      ..+..|++ .|.++++|.|..|++.|. ....|..|++.|.+ +++|.|..|++.|            .....|..|++.
T Consensus        10 ~~~~~h~~-~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F------------~~~~~L~~H~~~   76 (98)
T 2gqj_A           10 GPEEQWQR-AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF------------KSKAGLNYHTMA   76 (98)
T ss_dssp             CSCSHHHH-TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCC------------SCHHHHHHHHHH
T ss_pred             CcHHHHHH-HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCcc------------CCHHHHHHHHHH
Confidence            34445544 455556666666666666 55666666555555 5555555433332            455555666555


Q ss_pred             hcCCCCc
Q psy16925        114 HTGKRPY  120 (166)
Q Consensus       114 h~~~~p~  120 (166)
                      |++++|.
T Consensus        77 h~~~kp~   83 (98)
T 2gqj_A           77 EHSAKPS   83 (98)
T ss_dssp             HSCSCSS
T ss_pred             HcCCCCC
Confidence            5555553

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.51  E-value=2.5e-14  Score=82.40  Aligned_cols=64  Identities=34%  Similarity=0.900  Sum_probs=58.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPY  120 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~  120 (166)
                      .+.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|            .....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f------------~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF------------NRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEE------------SCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchh------------CCHHHHHHHHHhcCCCCCC
Confidence            567889999999999999999999999999999999998866655            7889999999999999997

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=7.3e-14  Score=84.62  Aligned_cols=74  Identities=15%  Similarity=0.225  Sum_probs=49.7

Q ss_pred             hcCChHHHHHHHHHhhcCCCCeecccchhhc-CChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHH
Q psy16925         31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSF-ASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKN  109 (166)
Q Consensus        31 ~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f-~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~  109 (166)
                      .+.....|..|.+ .+.++++|.|..|++.| .....|..|++.| ++++|.|..|++.|            .....|..
T Consensus        15 ~~~~~~~~~~~~~-~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F------------~~~~~L~~   80 (96)
T 2ctd_A           15 VYAAGSLEEQWYL-EIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQL------------RSLAGMKY   80 (96)
T ss_dssp             SSCTTCHHHHHHH-HHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCC------------SSHHHHHH
T ss_pred             CCCCchHHHHHHH-HhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCee------------CCHHHHHH
Confidence            4566666667665 56667777777777777 7777777777777 77777776644443            56666777


Q ss_pred             H-hhhhcCCC
Q psy16925        110 H-HNLHTGKR  118 (166)
Q Consensus       110 H-~~~h~~~~  118 (166)
                      | +++|+++.
T Consensus        81 H~~~~H~~~p   90 (96)
T 2ctd_A           81 HVMANHNSLP   90 (96)
T ss_dssp             HHHHHTCCCS
T ss_pred             HhHHhcCCCC
Confidence            7 66665443

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=7.9e-14  Score=82.43  Aligned_cols=77  Identities=18%  Similarity=0.301  Sum_probs=66.6

Q ss_pred             CcccCCCCCccchhhhhhhcCChHHHHHHHHHhhcCC---CCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccc
Q psy16925         13 GFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGE---RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKS   89 (166)
Q Consensus        13 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~---~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~   89 (166)
                      ..+.......|.|.+|++.|.....|..|++..+..+   ++|.|..|++.|.....|..|++.|.++.++.|..|+..+
T Consensus         6 H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A            6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            3344556678999999999999999999997555543   7899999999999999999999999999999999988654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.47  E-value=3.3e-14  Score=77.65  Aligned_cols=47  Identities=34%  Similarity=0.664  Sum_probs=39.8

Q ss_pred             CCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhc
Q psy16925         97 CGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus        97 c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      |++.|.....|..|+++|++++||.|+.|++.|.....|..|++.+|
T Consensus        10 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C           10 CGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             TCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            44455788888999999999999999999999999999999988766

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.2e-14  Score=86.17  Aligned_cols=75  Identities=16%  Similarity=0.279  Sum_probs=63.2

Q ss_pred             hhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcC-CCchhHHHHhhhhcCCCCcccCcccccccCChhhhh
Q psy16925         59 QSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYP-DESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRS  137 (166)
Q Consensus        59 ~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f-~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~  137 (166)
                      ..|.....+..|++.+.++++|.|+.|+            +.| .....|..|++.| +++||.|.+|++.|.....|..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~------------k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~   80 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQ------------AVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKY   80 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTC------------SCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHH
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCC------------CCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHH
Confidence            3567778888999999999999998755            556 6788899999999 9999999999999999999999


Q ss_pred             hhhhhcchh
Q psy16925        138 HKRRMHPEE  146 (166)
Q Consensus       138 H~~~~h~~~  146 (166)
                      |++..|+++
T Consensus        81 H~~~~H~~~   89 (96)
T 2ctd_A           81 HVMANHNSL   89 (96)
T ss_dssp             HHHHHTCCC
T ss_pred             HhHHhcCCC
Confidence            943457654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=6.9e-14  Score=79.65  Aligned_cols=62  Identities=32%  Similarity=0.591  Sum_probs=30.3

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRP  119 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p  119 (166)
                      ++++++|.|..|++.|.....|..|++.|.++++|.|..|++.|            .....|..|++.|++++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f------------~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDT------------KQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEE------------SSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCcc------------CCHHHHHHHHHHHhCCCC
Confidence            34445555555555555555555555555555555444433322            344445555555544443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=2.9e-14  Score=81.74  Aligned_cols=58  Identities=36%  Similarity=0.728  Sum_probs=36.7

Q ss_pred             HcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhh
Q psy16925         73 IHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus        73 ~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      .|+++++|.|..|++.|            .....|..|++.|++++||.|++|++.|.....|..|++.|
T Consensus         8 ~H~~~k~~~C~~C~k~f------------~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAF------------SRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             TTTTCCCEECSSSCCEE------------SSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCCccCCCCCCcc------------CCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            45556666665544433            55566666666666666777777777777777777776653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.3e-14  Score=88.29  Aligned_cols=72  Identities=15%  Similarity=0.287  Sum_probs=57.2

Q ss_pred             cCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCC-CchhHHHHhhhhcC-CCCcccCcccccccCChhhhhh
Q psy16925         61 FASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPD-ESKDLKNHHNLHTG-KRPYTCPWCSRTFANGSNCRSH  138 (166)
Q Consensus        61 f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~-~~~~l~~H~~~h~~-~~p~~C~~C~~~f~~~~~l~~H  138 (166)
                      +.....+..|++.|.++++|.|..|++.|            . ....|..|++.|++ ++||.|++|++.|.....|..|
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f------------~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H   73 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVT------------RKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYH   73 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCC------------SSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHH
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCCh------------hhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHH
Confidence            44455667788888888888888765544            6 77788889888888 8889999999999999999999


Q ss_pred             hhhhcc
Q psy16925        139 KRRMHP  144 (166)
Q Consensus       139 ~~~~h~  144 (166)
                      ++.||.
T Consensus        74 ~~~h~~   79 (98)
T 2gqj_A           74 TMAEHS   79 (98)
T ss_dssp             HHHHSC
T ss_pred             HHHHcC
Confidence            887654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=2.6e-14  Score=83.15  Aligned_cols=45  Identities=20%  Similarity=0.544  Sum_probs=26.6

Q ss_pred             CCchhHHHHhhhhcC---CCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        102 DESKDLKNHHNLHTG---KRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~---~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      .....|..|++.|++   ++||.|++|++.|.....|..|++.+|+++
T Consensus        18 ~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A           18 RQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             SSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            445555555555553   556666666666666666666665556554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=1.3e-13  Score=81.49  Aligned_cols=61  Identities=20%  Similarity=0.305  Sum_probs=51.7

Q ss_pred             cCCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHH-hHcCCC
Q psy16925         16 NASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHL-TIHSDD   77 (166)
Q Consensus        16 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~-~~h~~~   77 (166)
                      .......|.|++|++.|.....|..|++ .|++++||.|.+|++.|.....|..|+ +.|+.+
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3444566899999999999999999987 799999999999999999999999996 557655

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.7e-13  Score=78.42  Aligned_cols=61  Identities=38%  Similarity=0.850  Sum_probs=35.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGK  117 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~  117 (166)
                      +|+++++|.|..|++.|.....|..|++.|.++++|.|..|++.|            .....|..|+++|+++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f------------~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAF------------SQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEE------------SSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCccc------------CCHHHHHHHHHhcCCC
Confidence            355556666666666666666666666666666666555544333            4555566666665544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=3.9e-14  Score=79.71  Aligned_cols=59  Identities=22%  Similarity=0.617  Sum_probs=38.0

Q ss_pred             HcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhh-h-cCCCCcccCcccccccCChhhhhhhhhhc
Q psy16925         73 IHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNL-H-TGKRPYTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus        73 ~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~-h-~~~~p~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      .|+++++|.|+.|++.|            .....|..|++. | .+++||.|+.|++.|...+.|..|++.+|
T Consensus         4 ~h~~~k~~~C~~C~k~f------------~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVY------------THISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEEETTEEECTTTCCEE------------SSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccCCCcceECCCCcchh------------CCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            35555666665544433            555666666665 5 46677777777777777777777777655

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.4e-13  Score=75.94  Aligned_cols=52  Identities=27%  Similarity=0.549  Sum_probs=42.4

Q ss_pred             ccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925         95 VSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus        95 ~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      ..|++.|.....|..|++.|++++||.|+.|++.|.....|..|++..|+++
T Consensus         6 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            6 EVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             TTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            3455556788888899888888899999999999999999999976667764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.42  E-value=1.9e-13  Score=86.96  Aligned_cols=81  Identities=19%  Similarity=0.261  Sum_probs=68.0

Q ss_pred             CccchhhhhhhcC------ChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCcccccccc
Q psy16925         21 GKYSLALMVTRFS------SRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSN   94 (166)
Q Consensus        21 ~~~~C~~C~~~~~------~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c   94 (166)
                      ..+.|++|.+.|.      ....|..|+  .|++++||.|..|++.|.....|..|++.|  ++||.|+.|++.      
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~------  109 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKE------  109 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCB------
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcc------
Confidence            3477999988776      555666665  488899999999999999999999999998  888988876655      


Q ss_pred             ccCCCcCCCchhHHHHhhhhcCC
Q psy16925         95 VSCGWYPDESKDLKNHHNLHTGK  117 (166)
Q Consensus        95 ~~c~~~f~~~~~l~~H~~~h~~~  117 (166)
                            |...+.|..|++.|++.
T Consensus       110 ------f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          110 ------FTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             ------CSSHHHHHHHHHHTTCC
T ss_pred             ------cCCHHHHHHHHHHHCCc
Confidence                  57889999999999875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.2e-13  Score=77.54  Aligned_cols=64  Identities=22%  Similarity=0.315  Sum_probs=58.0

Q ss_pred             CCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCcc
Q psy16925         17 ASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWK   81 (166)
Q Consensus        17 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~   81 (166)
                      .+....|.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.....|..|++.|.+++|..
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHG-GGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            344567999999999999999999997 6999999999999999999999999999998887643

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.38  E-value=3.9e-13  Score=73.27  Aligned_cols=55  Identities=27%  Similarity=0.487  Sum_probs=43.1

Q ss_pred             cchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCC
Q psy16925         23 YSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDA   78 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   78 (166)
                      |.|..|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|.+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH-HTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcCCCCcCcCCCHHHHHHHHH-hcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            678888888888888888876 6777888888888888888888888877776653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.36  E-value=4.3e-13  Score=73.08  Aligned_cols=51  Identities=29%  Similarity=0.573  Sum_probs=39.8

Q ss_pred             cccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcc
Q psy16925         94 NVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus        94 c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      |..|++.|.....|..|++.|++++||.|+.|++.|.....|..|++.++.
T Consensus         4 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            444556667788888888888888888888888888888888888876544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=4.9e-13  Score=75.12  Aligned_cols=59  Identities=17%  Similarity=0.454  Sum_probs=30.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhH-c-CCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTI-H-SDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHT  115 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~-h-~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~  115 (166)
                      .|++++||.|..|++.|.....|..|++. | .++++|.|+.|++.|            ...+.|..|++.++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f------------~~~~~L~~H~~~~H   64 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEF------------TRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEE------------SCHHHHHHHHHHHT
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCcc------------CCHHHHHHHHHHHc
Confidence            34555555555555555555555555554 4 345555555443333            44555555555543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=6.6e-13  Score=79.92  Aligned_cols=60  Identities=22%  Similarity=0.305  Sum_probs=27.1

Q ss_pred             cchhhhhhhcCChHHHHHHHHHhhcCCCC--------eecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         23 YSLALMVTRFSSRSAVTAHTKAVHLGERP--------FVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~--------~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      +.|..|++.|.....|..|++..|.++++        |.|..|++.|.....|..|++.|++++||.|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            34555555555555555554422444443        4444444444444444444444444444443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.34  E-value=8.6e-13  Score=71.87  Aligned_cols=54  Identities=28%  Similarity=0.425  Sum_probs=39.3

Q ss_pred             CccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcC
Q psy16925         21 GKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        21 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~   75 (166)
                      ..|.|.+|++.|.....|..|++ .|.+++||.|+.|++.|.....|..|++.|.
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLR-THTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHH-HHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHH-HcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            45777777777777777777776 5777777777777777777777777776654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=3.8e-12  Score=76.52  Aligned_cols=70  Identities=20%  Similarity=0.245  Sum_probs=52.4

Q ss_pred             CCeecccchhhcCChHHHHHHHhH-cCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTI-HSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCP  123 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~  123 (166)
                      ..+.|..|++.|.....|..|++. |.++++..+..|.    ...|..|++.|.....|..|+++|++++||.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~----~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY----WEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCC----CTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCcccee----ccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            346799999999999999999987 8887763222221    123445666668888899999999999999886

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=2.1e-15  Score=86.51  Aligned_cols=37  Identities=11%  Similarity=0.129  Sum_probs=20.6

Q ss_pred             CCCcccCcccccccCChhhhhhhhhhcchhHHHHHHHh
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSL  154 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c  154 (166)
                      ++||.|+.|++.|...+.|..|++. |.++.++.|+.|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~-H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGN-ESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSC-CCCCCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHh-hcCCCCCCCCCC
Confidence            4556666666666666666666554 444445555443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=2.1e-12  Score=74.91  Aligned_cols=62  Identities=21%  Similarity=0.457  Sum_probs=32.6

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCC---CCCccCCcCCccccccccccCCCcCCCchhHHHHh-hhhcCCCC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSD---DAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHH-NLHTGKRP  119 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~---~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~-~~h~~~~p  119 (166)
                      |+++++|.|.+|++.|.....|..|++.|.+   +++|.|..|++.|            .....|..|+ ..|.+++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f------------~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRF------------EKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEE------------SSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchh------------CCHHHHHHHHHHhCCCCCC
Confidence            4455556666666666555555555555553   4555555444333            4555555555 33444444

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=5.1e-12  Score=73.14  Aligned_cols=40  Identities=30%  Similarity=0.771  Sum_probs=19.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHh-HcCCC-CCccCCc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLT-IHSDD-APWKCDI   84 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~-~~~~c~~   84 (166)
                      .|++++||.|.+|++.|.....|..|++ .|.++ ++|.|+.
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~   50 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH   50 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC
Confidence            3444555555555555555555555543 34332 4444444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=8.4e-13  Score=75.64  Aligned_cols=40  Identities=33%  Similarity=0.770  Sum_probs=23.5

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhh
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      .....|..|++.|.+++||.|+.|++.|...+.|..|++.
T Consensus        32 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G           32 SRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             SSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            4555555555555555666666666666666666666553

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2.8e-12  Score=70.55  Aligned_cols=55  Identities=24%  Similarity=0.593  Sum_probs=45.3

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHH-hHcCCC
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHL-TIHSDD   77 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~-~~h~~~   77 (166)
                      .|.|.+|++.|.....|..|++ .|.++++|.|+.|++.|.....|..|+ +.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHH-TTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4788888888888888888886 688888888888888888888888886 566654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3.6e-15  Score=85.53  Aligned_cols=71  Identities=24%  Similarity=0.440  Sum_probs=58.8

Q ss_pred             hHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhh
Q psy16925         35 RSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLH  114 (166)
Q Consensus        35 ~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h  114 (166)
                      ...|..|++ .|.++++|.|..|++.|.....|..       +++|.|+.|++.|            ...+.|..|++.|
T Consensus         3 ~~~l~~H~~-~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f------------~~~~~l~~H~~~H   62 (73)
T 2ctu_A            3 SGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDS------------CQEAALNKDEGNE   62 (73)
T ss_dssp             CCSCCCCCC-CCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTC------------SCCCSSCCCSSCC
T ss_pred             chhHHHHHH-HhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhh------------cCHHHHHHHHHhh
Confidence            345667876 7999999999999999999887765       6778887766554            7778899999999


Q ss_pred             cCCCCcccCcc
Q psy16925        115 TGKRPYTCPWC  125 (166)
Q Consensus       115 ~~~~p~~C~~C  125 (166)
                      ++++||.|++|
T Consensus        63 ~~~~~~~C~~C   73 (73)
T 2ctu_A           63 SGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCSSCCCC
T ss_pred             cCCCCCCCCCC
Confidence            99999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=4.5e-12  Score=72.52  Aligned_cols=67  Identities=28%  Similarity=0.615  Sum_probs=56.0

Q ss_pred             HHHHHHHHhhcCCCCeecc--cchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhh
Q psy16925         37 AVTAHTKAVHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLH  114 (166)
Q Consensus        37 ~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h  114 (166)
                      .+..|.+..+.++++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|            ...+.|..|+++|
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f------------~~~~~l~~H~~~H   72 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF------------SRSDHLTTHIRTH   72 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE------------SCHHHHHHHHTTC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchh------------CCHHHHHHHHHhc
Confidence            4455666678899999997  5999999999999999999999999998866655            7888999999887


Q ss_pred             c
Q psy16925        115 T  115 (166)
Q Consensus       115 ~  115 (166)
                      +
T Consensus        73 t   73 (73)
T 1f2i_G           73 T   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=8.9e-12  Score=69.98  Aligned_cols=55  Identities=16%  Similarity=0.277  Sum_probs=34.3

Q ss_pred             CCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecc-cchhhcCChHHHHHHHhHcCCC
Q psy16925         20 LGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCH-ECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        20 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~-~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ...|.|.+|++.|. ...|..|++ . ++++||.|. .|++.|.....|..|++.|.+.
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~-~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQY-Q-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHH-H-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCeeccccCCccC-HHHHHHHHH-H-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            44566666666666 666666665 3 566666666 6666666666666666665443

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.1e-11  Score=68.46  Aligned_cols=37  Identities=16%  Similarity=0.372  Sum_probs=23.3

Q ss_pred             chhHHHHhhhhcCCCCcccC-cccccccCChhhhhhhhh
Q psy16925        104 SKDLKNHHNLHTGKRPYTCP-WCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       104 ~~~l~~H~~~h~~~~p~~C~-~C~~~f~~~~~l~~H~~~  141 (166)
                      .+.|..|+++ ++++||.|+ .|++.|...+.|..|++.
T Consensus        22 ~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A           22 FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHh
Confidence            5556666665 666666666 666666666666666654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.7e-11  Score=63.62  Aligned_cols=41  Identities=37%  Similarity=0.639  Sum_probs=30.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.6e-11  Score=63.20  Aligned_cols=41  Identities=32%  Similarity=0.542  Sum_probs=31.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56777777777777777777777777777777777777665

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.9e-11  Score=63.44  Aligned_cols=41  Identities=32%  Similarity=0.599  Sum_probs=28.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            56667777777777777777777777777777777776654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.8e-12  Score=67.76  Aligned_cols=44  Identities=32%  Similarity=0.461  Sum_probs=24.0

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS  153 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  153 (166)
                      |+++|++++||.|++|++.|...+.|..|++..|.++.++.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            44555555556666666666655556555552345555555443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2e-11  Score=63.39  Aligned_cols=41  Identities=32%  Similarity=0.561  Sum_probs=27.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            46666677777777777777777777666666666666654

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.5e-11  Score=62.97  Aligned_cols=41  Identities=32%  Similarity=0.614  Sum_probs=29.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777654

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.8e-11  Score=63.55  Aligned_cols=41  Identities=32%  Similarity=0.661  Sum_probs=28.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            46667777777777777777777777777777777766654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.1e-11  Score=63.31  Aligned_cols=41  Identities=32%  Similarity=0.617  Sum_probs=28.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777776654

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.8e-11  Score=62.82  Aligned_cols=41  Identities=32%  Similarity=0.677  Sum_probs=30.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56777777777777777777777777777777777777654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.13  E-value=2e-11  Score=63.42  Aligned_cols=41  Identities=29%  Similarity=0.645  Sum_probs=26.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.13  E-value=1.8e-11  Score=63.56  Aligned_cols=41  Identities=32%  Similarity=0.666  Sum_probs=23.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555543

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.4e-11  Score=63.12  Aligned_cols=41  Identities=34%  Similarity=0.636  Sum_probs=29.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.12  E-value=2.6e-11  Score=62.98  Aligned_cols=24  Identities=33%  Similarity=0.494  Sum_probs=12.5

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           23 SRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444455555555555555555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.5e-11  Score=63.02  Aligned_cols=38  Identities=32%  Similarity=0.718  Sum_probs=15.7

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      |+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            33344444444444444444444444444444444433

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=63.31  Aligned_cols=41  Identities=34%  Similarity=0.625  Sum_probs=29.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|++++||.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.5e-11  Score=63.05  Aligned_cols=41  Identities=34%  Similarity=0.612  Sum_probs=29.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            6 SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777654

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=63.32  Aligned_cols=41  Identities=32%  Similarity=0.606  Sum_probs=25.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.3e-11  Score=63.14  Aligned_cols=41  Identities=32%  Similarity=0.647  Sum_probs=26.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2.2e-11  Score=63.23  Aligned_cols=41  Identities=29%  Similarity=0.613  Sum_probs=27.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46666667777777777777777777666666666666654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.8e-11  Score=63.54  Aligned_cols=44  Identities=25%  Similarity=0.488  Sum_probs=34.6

Q ss_pred             HHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         70 HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        70 h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      |++.|+++++|.|+.|++.|            ...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F------------~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVF------------TQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBC------------SSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCee------------CCHHHHHHHhhhcCCCCCCCCCCC
Confidence            55677888888887755544            778888888888888888888876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.12  E-value=2.7e-11  Score=62.89  Aligned_cols=37  Identities=27%  Similarity=0.608  Sum_probs=14.5

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em0_A            7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP   43 (46)
T ss_dssp             SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCS
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCC
Confidence            3333333343333333333333333333333333333

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=7.1e-11  Score=63.53  Aligned_cols=44  Identities=25%  Similarity=0.742  Sum_probs=26.7

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHh-HcCCCCCccCCcCCccc
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLT-IHSDDAPWKCDICSKKS   89 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~C~~~~   89 (166)
                      +.++++|.|..|++.|.....|..|++ .|+++++|.|..|++.|
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F   51 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP   51 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCC
Confidence            445566666666666666666666654 56666666666655555

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3e-11  Score=62.76  Aligned_cols=35  Identities=23%  Similarity=0.558  Sum_probs=12.9

Q ss_pred             CCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         48 GERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        48 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      ++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2elz_A            9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP   43 (46)
T ss_dssp             CCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCS
T ss_pred             CCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            33333333333333333333333333333333333

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2e-11  Score=63.42  Aligned_cols=41  Identities=29%  Similarity=0.542  Sum_probs=28.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            6 SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56667777777777777777777777777777777776654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.3e-11  Score=63.16  Aligned_cols=41  Identities=34%  Similarity=0.676  Sum_probs=28.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46667777777777777777777777777777777776654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.12  E-value=2.3e-11  Score=63.20  Aligned_cols=41  Identities=29%  Similarity=0.609  Sum_probs=27.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            46666666666666666666666666666666666666654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.12  E-value=2e-11  Score=63.38  Aligned_cols=41  Identities=24%  Similarity=0.428  Sum_probs=26.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46666666666666666666666666666666666666554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2e-11  Score=63.43  Aligned_cols=41  Identities=32%  Similarity=0.587  Sum_probs=26.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46666666666666666666666666666666666666554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=6.3e-11  Score=63.74  Aligned_cols=46  Identities=26%  Similarity=0.484  Sum_probs=27.1

Q ss_pred             cCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhh-hhcCCCCcccCcccccccC
Q psy16925         74 HSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHN-LHTGKRPYTCPWCSRTFAN  131 (166)
Q Consensus        74 h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~-~h~~~~p~~C~~C~~~f~~  131 (166)
                      |.++++|.|..|++.|            .....|..|++ .|++++||.|++|++.|++
T Consensus         7 ~~~~k~~~C~~C~k~f------------~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGF------------SRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEE------------SSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCccc------------CCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3445556655544333            55666666665 6666666666666666654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.12  E-value=1.9e-11  Score=63.49  Aligned_cols=44  Identities=23%  Similarity=0.449  Sum_probs=36.0

Q ss_pred             HHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         70 HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        70 h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      |++.|+++++|.|+.|++.|            ...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F------------~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCF------------SQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCC------------SSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCccc------------CCHHHHHHHHHHcCCCCCcCCCCC
Confidence            56778888888888755544            788889999999999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.8e-12  Score=67.45  Aligned_cols=44  Identities=25%  Similarity=0.428  Sum_probs=25.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHHh
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSL  154 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c  154 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGG-GSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            45556666666666666666666666666553 455555555443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.5e-11  Score=63.02  Aligned_cols=41  Identities=37%  Similarity=0.669  Sum_probs=25.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.7e-11  Score=63.67  Aligned_cols=41  Identities=34%  Similarity=0.577  Sum_probs=28.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56666777777777777777777777766766666666654

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=62.90  Aligned_cols=41  Identities=34%  Similarity=0.501  Sum_probs=29.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777654

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.7e-11  Score=62.88  Aligned_cols=41  Identities=24%  Similarity=0.306  Sum_probs=29.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.1e-11  Score=62.67  Aligned_cols=41  Identities=32%  Similarity=0.563  Sum_probs=30.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56777777777777777777777777777777777777655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=62.90  Aligned_cols=41  Identities=29%  Similarity=0.533  Sum_probs=25.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.11  E-value=2.8e-11  Score=62.84  Aligned_cols=44  Identities=23%  Similarity=0.481  Sum_probs=23.0

Q ss_pred             HHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         70 HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        70 h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      |++.|+++++|.|+.|++.|            ...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F------------~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAF------------SQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBC------------SCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchh------------CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555433333            455555555555555555555544

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.8e-11  Score=62.81  Aligned_cols=41  Identities=32%  Similarity=0.673  Sum_probs=29.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777654

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.11  E-value=2.5e-11  Score=62.97  Aligned_cols=41  Identities=34%  Similarity=0.630  Sum_probs=26.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46666666666666666666666666666666666666554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=63.35  Aligned_cols=41  Identities=29%  Similarity=0.631  Sum_probs=27.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46666667777777777777777667666666666666654

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=62.97  Aligned_cols=41  Identities=32%  Similarity=0.665  Sum_probs=29.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            6 SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            56667777777777777777777777777777777776654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.4e-11  Score=63.07  Aligned_cols=24  Identities=25%  Similarity=0.438  Sum_probs=12.2

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           23 SHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCHHHHHHHHHHhcCCCCCCCCCC
Confidence            444455555555555555555444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.4e-11  Score=63.04  Aligned_cols=41  Identities=34%  Similarity=0.587  Sum_probs=24.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666665544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.2e-11  Score=63.20  Aligned_cols=41  Identities=32%  Similarity=0.675  Sum_probs=23.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555556666666666666666666555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=63.14  Aligned_cols=41  Identities=29%  Similarity=0.590  Sum_probs=30.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777655

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=63.37  Aligned_cols=44  Identities=23%  Similarity=0.394  Sum_probs=35.4

Q ss_pred             HHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         70 HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        70 h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      |++.|+++++|.|..|++.|            ...+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F------------~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGY------------NRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBC------------SSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchh------------CCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55678888888887755544            778889999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.7e-11  Score=62.89  Aligned_cols=42  Identities=26%  Similarity=0.423  Sum_probs=18.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHH-CCSSSCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHh-cCCCCCCCCC
Confidence            33444444444444444444444444444432 3344444443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2e-11  Score=63.41  Aligned_cols=41  Identities=32%  Similarity=0.682  Sum_probs=27.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            46666666776677777666666666666666666666654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.6e-11  Score=62.93  Aligned_cols=41  Identities=24%  Similarity=0.416  Sum_probs=28.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46666777777777777777777777766766666666654

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.3e-11  Score=62.54  Aligned_cols=24  Identities=25%  Similarity=0.443  Sum_probs=12.7

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|+.|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           23 SDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555555555555555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.4e-11  Score=63.10  Aligned_cols=42  Identities=24%  Similarity=0.389  Sum_probs=19.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKI-HTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGG-TSCSSCSCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            34444445555555555555555555555443 3444444443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.7e-11  Score=62.89  Aligned_cols=41  Identities=34%  Similarity=0.696  Sum_probs=30.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            56777777777777777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=62.49  Aligned_cols=24  Identities=25%  Similarity=0.303  Sum_probs=12.2

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|+.|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           23 SFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444455555555555555555443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.7e-11  Score=62.40  Aligned_cols=24  Identities=21%  Similarity=0.217  Sum_probs=12.2

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|++.|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           23 SSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CChHHHHHHHHHhCCCCCCCCCCC
Confidence            444455555555555555555444

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.10  E-value=2.5e-11  Score=62.98  Aligned_cols=43  Identities=33%  Similarity=0.464  Sum_probs=20.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS  153 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  153 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-HTGVKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGG-SSSCCCSCCTT
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            34444455555555555555555555555443 44444444443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.6e-11  Score=62.92  Aligned_cols=42  Identities=29%  Similarity=0.447  Sum_probs=19.3

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHH-HSCCCTTSSS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            33444444444444455545444444444443 3344444443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.10  E-value=3.8e-11  Score=62.31  Aligned_cols=41  Identities=27%  Similarity=0.474  Sum_probs=29.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777654

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.5e-11  Score=63.04  Aligned_cols=24  Identities=25%  Similarity=0.398  Sum_probs=12.0

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|++.|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           23 RHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CChHHHHHHHhhcCCCCCCCCCCC
Confidence            444445555555555555555444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=62.46  Aligned_cols=44  Identities=25%  Similarity=0.365  Sum_probs=22.2

Q ss_pred             HHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         70 HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        70 h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      |++.|+++++|.|+.|++.|            ...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f------------~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSF------------TWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBC------------SSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhh------------CCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33445555555555433332            445555555555555555555544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=62.49  Aligned_cols=24  Identities=21%  Similarity=0.218  Sum_probs=12.4

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|+.|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           23 CGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555555555555544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=62.46  Aligned_cols=24  Identities=25%  Similarity=0.474  Sum_probs=12.1

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           23 SQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444445555555555555555444

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.3e-11  Score=62.51  Aligned_cols=42  Identities=21%  Similarity=0.357  Sum_probs=22.0

Q ss_pred             hHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         72 TIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        72 ~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      +.|+++++|.|..|++.|            ...+.|..|+++|++++||.|+.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f------------~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAF------------SSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEE------------SSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCCCcCccCCCCCccc------------CCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345555555555443333            455555555555555555555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=62.81  Aligned_cols=42  Identities=29%  Similarity=0.494  Sum_probs=19.4

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRI-HTGVKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGG-GSCCCSCSSC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHH-cCCCCCCCCC
Confidence            33444444445555555555554445444442 3344444443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=62.45  Aligned_cols=24  Identities=29%  Similarity=0.422  Sum_probs=12.1

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|++.|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           23 GLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444445555555555555555444

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3e-11  Score=62.72  Aligned_cols=24  Identities=25%  Similarity=0.432  Sum_probs=11.9

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|++.|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           23 TKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444445555555555555555443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.10  E-value=3.1e-11  Score=62.68  Aligned_cols=24  Identities=25%  Similarity=0.473  Sum_probs=12.1

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|+.|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           23 SRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444445555555555555555443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.4e-11  Score=63.12  Aligned_cols=41  Identities=27%  Similarity=0.602  Sum_probs=23.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555566666666666666666666555555555555543

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.09  E-value=3.4e-11  Score=62.45  Aligned_cols=43  Identities=33%  Similarity=0.482  Sum_probs=21.5

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS  153 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  153 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~   45 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HSGEKPSGPSS   45 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGG-GTSCCCCSTTC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHH-hCCCCCCCCCC
Confidence            44445555555555555555555555555443 44444444443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.7e-11  Score=62.37  Aligned_cols=24  Identities=21%  Similarity=0.294  Sum_probs=11.9

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           23 TIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444445555555555555555443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=3.4e-11  Score=62.48  Aligned_cols=43  Identities=28%  Similarity=0.427  Sum_probs=21.8

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS  153 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  153 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMV-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGG-GTTCCCSSTTC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            34445555555555555555555555555443 44444444443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.8e-11  Score=62.82  Aligned_cols=43  Identities=21%  Similarity=0.423  Sum_probs=21.6

Q ss_pred             HhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         71 LTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        71 ~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ++.|+++++|.|..|++.|            ...+.|..|+++|++++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F------------~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAF------------SRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEE------------SSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCccc------------CcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445555555555433333            445555555555555555555544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.1e-11  Score=62.67  Aligned_cols=41  Identities=29%  Similarity=0.473  Sum_probs=18.8

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      +++|++++||.|+.|++.|...+.|..|++. |.++.+|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTT-TCCCCCSCCS
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCC
Confidence            3444444444444444444444444444443 3344444443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=8.4e-11  Score=60.69  Aligned_cols=42  Identities=24%  Similarity=0.441  Sum_probs=31.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICS   86 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~   86 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            466777777777777777777777777777777777777664

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.4e-12  Score=66.40  Aligned_cols=43  Identities=33%  Similarity=0.544  Sum_probs=24.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS  153 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  153 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTT-TTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            45556666666666666666666666666553 45555555543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.09  E-value=8.2e-11  Score=67.02  Aligned_cols=58  Identities=29%  Similarity=0.496  Sum_probs=44.7

Q ss_pred             cCCCCCccchhh--hhhhcCChHHHHHHHHHhhcCCCCeeccc--chhhcCChHHHHHHHhHc
Q psy16925         16 NASTLGKYSLAL--MVTRFSSRSAVTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIH   74 (166)
Q Consensus        16 ~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~h   74 (166)
                      +......|.|..  |++.|.....|..|++ .|.++++|.|.+  |++.|.....|..|++.|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHH-HHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHH-hcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            444556788877  8888888888888876 688888888864  888888888888887654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.4e-11  Score=62.49  Aligned_cols=43  Identities=30%  Similarity=0.508  Sum_probs=21.8

Q ss_pred             HhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         71 LTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        71 ~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ++.|+++++|.|..|++.|            ...+.|..|+++|++++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f------------~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAF------------HRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEE------------SSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccccCCCcCeECCCCCCee------------CChHHHHHHHHHcCCCCCCCCCCC
Confidence            3445555555555433333            445555555555555555555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.7e-11  Score=62.90  Aligned_cols=42  Identities=33%  Similarity=0.559  Sum_probs=18.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHH-HHCSSCSSSC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHh-cCCCCCCCCC
Confidence            33444444444444444444444444444442 3344444443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.9e-11  Score=62.76  Aligned_cols=24  Identities=25%  Similarity=0.353  Sum_probs=12.6

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|+.|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           23 SVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555555555555544

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.8e-11  Score=62.83  Aligned_cols=37  Identities=32%  Similarity=0.731  Sum_probs=14.6

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      |+++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            3333334444444444444444444333333333333

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.2e-11  Score=62.62  Aligned_cols=42  Identities=24%  Similarity=0.302  Sum_probs=18.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-HTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTT-TSCSCCSSCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            33444444444444444444444444444433 3444444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.9e-11  Score=62.79  Aligned_cols=42  Identities=31%  Similarity=0.498  Sum_probs=20.2

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |++.|++++||.|++|++.|...+.|..|++. |.++.++.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKR-HFREKSSGPS   44 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHH-HHSTTSSCCS
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHH-HcCCCCCCCC
Confidence            34444555555555555555555555555443 3444444443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=62.35  Aligned_cols=24  Identities=29%  Similarity=0.459  Sum_probs=12.9

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|++.|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           23 GDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445555555555555555555544

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=63.33  Aligned_cols=44  Identities=25%  Similarity=0.479  Sum_probs=35.6

Q ss_pred             HHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         70 HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        70 h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      |++.|+++++|.|+.|++.|            ...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f------------~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVF------------TQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEE------------SSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchh------------CCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678888888888766554            778889999999999999999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.1e-11  Score=62.65  Aligned_cols=24  Identities=29%  Similarity=0.486  Sum_probs=12.0

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|++.|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           23 TQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCHHHHHHHHHHHCCCCCCCCCCC
Confidence            444445555555555555555443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.9e-11  Score=62.23  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=22.1

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS  153 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  153 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.++.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT-HVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHH-CCSCCCSCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            44445555555555555555555555555543 44444444443

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4e-11  Score=62.20  Aligned_cols=42  Identities=29%  Similarity=0.529  Sum_probs=20.1

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV-HTGEKPSGPS   44 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGG-GSCCCCSCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            34444455555555555555555555555443 3444444443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.6e-11  Score=62.38  Aligned_cols=41  Identities=29%  Similarity=0.347  Sum_probs=18.1

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      +++|++++||.|+.|++.|...+.|..|++. |+++.++.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRV-HMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTT-TCCSCSSCCS
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            3444444444444444444444444444432 3333344433

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.08  E-value=9.7e-11  Score=66.70  Aligned_cols=45  Identities=40%  Similarity=0.880  Sum_probs=33.9

Q ss_pred             CCCcCCCchhHHHHhhhhcCCCCcccCc--ccccccCChhhhhhhhh
Q psy16925         97 CGWYPDESKDLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRR  141 (166)
Q Consensus        97 c~~~f~~~~~l~~H~~~h~~~~p~~C~~--C~~~f~~~~~l~~H~~~  141 (166)
                      |++.|.....|..|++.|++++||.|++  |++.|.....|..|++.
T Consensus        25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            4455567777888888888888888854  88888888888888764

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.1e-11  Score=63.31  Aligned_cols=41  Identities=32%  Similarity=0.647  Sum_probs=22.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35555555555555555555555555555555555555443

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=62.48  Aligned_cols=41  Identities=24%  Similarity=0.461  Sum_probs=27.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45666666666666666666666666666666666666654

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4e-11  Score=62.22  Aligned_cols=24  Identities=21%  Similarity=0.144  Sum_probs=12.4

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||+|+.|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           23 FQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444455555555555555555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5e-11  Score=61.85  Aligned_cols=40  Identities=33%  Similarity=0.682  Sum_probs=28.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDI   84 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   84 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667777777777777777777777777777777777654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.3e-11  Score=62.09  Aligned_cols=41  Identities=32%  Similarity=0.615  Sum_probs=19.0

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      +++|++++||.|++|++.|...+.|..|++. |.++.++.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRS-HSGEKPSGPS   44 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHH-SCCSSCCSSC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHH-hCCCCCCCCC
Confidence            3444444445555555555544445444443 3444444443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.8e-11  Score=62.15  Aligned_cols=41  Identities=27%  Similarity=0.562  Sum_probs=25.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHh-HcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLT-IHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++ .|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4566666666666666666666666666 6666666666554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.06  E-value=5.3e-11  Score=61.78  Aligned_cols=24  Identities=21%  Similarity=0.216  Sum_probs=12.6

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      .....|..|+++|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           23 SGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.1e-11  Score=62.66  Aligned_cols=43  Identities=28%  Similarity=0.465  Sum_probs=21.5

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESS  153 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  153 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++.|..
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~   45 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-HTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTT-SCSCCSSCCSC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHh-hCCCCCCCCCC
Confidence            34445555555555555555555555555443 44444444443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=1.2e-10  Score=60.95  Aligned_cols=41  Identities=24%  Similarity=0.429  Sum_probs=26.8

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICS   86 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~   86 (166)
                      +.++++|.|.+|++.|.....|..|++.|+++++|.|..|+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            45566666666666666666666666666666666666665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.06  E-value=7.7e-12  Score=67.40  Aligned_cols=50  Identities=16%  Similarity=0.238  Sum_probs=41.0

Q ss_pred             CCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHH
Q psy16925         98 GWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus        98 ~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                      ++.|.....|..|++.|++++||.|+.|++.|...+.|..|++. |+++.+
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp   52 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLEL-RHFAKP   52 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHH-HTTTSC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHH-hccCCC
Confidence            45567777788899999999999999999999999999999875 666544

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.3e-11  Score=61.02  Aligned_cols=40  Identities=38%  Similarity=0.708  Sum_probs=29.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDI   84 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   84 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677777777777777777777777777777777777764

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4e-11  Score=62.23  Aligned_cols=41  Identities=32%  Similarity=0.537  Sum_probs=18.1

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      +++|++++||.|++|++.|...+.|..|++. |.++.+|.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRT-HTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHHHH-HSSCCCSSSC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHHHH-cCCCCCCCCC
Confidence            3344444444444444444444444444443 3333344443

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.4e-11  Score=61.75  Aligned_cols=43  Identities=28%  Similarity=0.397  Sum_probs=22.8

Q ss_pred             HhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         71 LTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        71 ~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ++.|+++++|.|+.|++.|            ...+.|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f------------~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGY------------KRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEE------------SSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchh------------CCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3445555555555444333            455555556555555556655554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.04  E-value=3.1e-12  Score=71.07  Aligned_cols=52  Identities=13%  Similarity=0.378  Sum_probs=28.4

Q ss_pred             HHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhh
Q psy16925         70 HLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCR  136 (166)
Q Consensus        70 h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~  136 (166)
                      |++.|++++||.|+.|++.|            ...+.|.   +.|++++||.|+.|++.|....++.
T Consensus         5 h~~~H~~~k~~~C~~C~k~F------------~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTF------------TDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEE------------EHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             HHHHcCCCCCccCCCCCchh------------ccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            44555666666666555444            2222332   4566666666666666666555543

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-11  Score=64.27  Aligned_cols=41  Identities=32%  Similarity=0.515  Sum_probs=23.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRV-HTGERSSGP   43 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHH-CSSCCSCST
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCCCC
Confidence            44555666666666666666666666666553 455545444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.02  E-value=1.2e-10  Score=59.11  Aligned_cols=39  Identities=31%  Similarity=0.597  Sum_probs=29.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567777788888888887777777777777777777763

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.02  E-value=9.1e-13  Score=73.25  Aligned_cols=51  Identities=16%  Similarity=0.224  Sum_probs=44.4

Q ss_pred             HHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHHhhhhhhhhc
Q psy16925        108 KNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGKIFLYGK  162 (166)
Q Consensus       108 ~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~~f~~~~  162 (166)
                      ..|+++|++++||.|+.|++.|...+.|.    ..|+++.+|.|..||+.|....
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECT
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCc
Confidence            35788999999999999999999888775    4588999999999999997654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=59.20  Aligned_cols=41  Identities=29%  Similarity=0.513  Sum_probs=28.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46666777777777777777777777777777777766654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=60.42  Aligned_cols=42  Identities=29%  Similarity=0.509  Sum_probs=21.1

Q ss_pred             HhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCc
Q psy16925         71 LTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPW  124 (166)
Q Consensus        71 ~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~  124 (166)
                      ++.|+++++|.|..|++.|            ...+.|..|++.|++++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f------------~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAF------------RQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEE------------SSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCEECCcCCchh------------CCHHHHHHHHHHhCCCCCCCCCC
Confidence            3445555555555433333            44455555555555555555543

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.7e-11  Score=63.72  Aligned_cols=42  Identities=29%  Similarity=0.472  Sum_probs=25.6

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|++|++.|.....|..|++. |.++.+|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-HSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTT-TTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHh-cCCCCCCCCC
Confidence            44556666666666666666666666666654 5555555543

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.00  E-value=1.4e-10  Score=60.08  Aligned_cols=39  Identities=38%  Similarity=0.729  Sum_probs=30.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            6 SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            577778888888888888888888888788877777775

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=58.69  Aligned_cols=38  Identities=26%  Similarity=0.573  Sum_probs=27.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|++++||.|..|++.|.....|..|++.|+++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            46677777777777777777777777777777777665

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.6e-11  Score=63.85  Aligned_cols=42  Identities=26%  Similarity=0.472  Sum_probs=24.4

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |+++.+|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-HTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTT-TSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            45556666666666666666666666666553 4555555443

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.4e-10  Score=60.11  Aligned_cols=39  Identities=33%  Similarity=0.641  Sum_probs=29.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            567777777777777777777777777777777777775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-11  Score=63.53  Aligned_cols=41  Identities=27%  Similarity=0.488  Sum_probs=23.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTT-TSCSCCSST
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHh-cCCCCCCCC
Confidence            44555666666666666666666666666553 445545444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=59.67  Aligned_cols=39  Identities=28%  Similarity=0.632  Sum_probs=30.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            6 SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            577777888888888888888888888778777777775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.6e-10  Score=59.89  Aligned_cols=39  Identities=38%  Similarity=0.683  Sum_probs=29.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            6 SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567777777777777777777777777777777777765

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-11  Score=61.85  Aligned_cols=40  Identities=23%  Similarity=0.441  Sum_probs=27.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY  150 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  150 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~   41 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV-HTGSGPSS   41 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGG-TSCCSCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHH-hCCCCCCC
Confidence            55667777777777777777777777777764 55555543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.9e-11  Score=61.50  Aligned_cols=40  Identities=25%  Similarity=0.445  Sum_probs=29.0

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY  150 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  150 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTT-TSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHh-cCCCCCCC
Confidence            55667777888888888888888888888774 55655544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=59.99  Aligned_cols=39  Identities=33%  Similarity=0.701  Sum_probs=27.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            6 SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            466667777777777777777777777667766666665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.6e-10  Score=59.93  Aligned_cols=41  Identities=32%  Similarity=0.601  Sum_probs=22.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555543

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=59.53  Aligned_cols=39  Identities=33%  Similarity=0.707  Sum_probs=30.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            6 SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            577777888888888888888888887778777777775

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=59.34  Aligned_cols=39  Identities=36%  Similarity=0.663  Sum_probs=30.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            577777788888888888888888887777777777775

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=59.60  Aligned_cols=42  Identities=26%  Similarity=0.606  Sum_probs=33.2

Q ss_pred             HHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         41 HTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        41 H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      |++ .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCC-CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccc-cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 577788888888888888888888888888888888775

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.6e-10  Score=59.89  Aligned_cols=39  Identities=28%  Similarity=0.698  Sum_probs=25.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            466666666666666666666666666666666666664

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.3e-10  Score=58.69  Aligned_cols=39  Identities=26%  Similarity=0.542  Sum_probs=30.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|++++||.|..|++.|.....|..|++.|+++++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            6 SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            577777888888888888888888887777777777763

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=59.45  Aligned_cols=39  Identities=33%  Similarity=0.626  Sum_probs=30.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            577777788888888888888888887777777777775

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.8e-11  Score=62.85  Aligned_cols=42  Identities=19%  Similarity=0.284  Sum_probs=29.4

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcch-hHHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE-ELKLYES  152 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~c~  152 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.+ +.+|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERI-HTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTT-CCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            56667777777777777777777777777764 555 6665553

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.1e-10  Score=59.46  Aligned_cols=39  Identities=26%  Similarity=0.607  Sum_probs=27.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            6 SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            466667777777777777777777777777777766664

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.2e-11  Score=62.61  Aligned_cols=41  Identities=22%  Similarity=0.475  Sum_probs=28.3

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERT-HARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHH-CCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHh-cCCCCCCCC
Confidence            56667777777777777777777777777764 555555443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=58.48  Aligned_cols=39  Identities=28%  Similarity=0.583  Sum_probs=29.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            577777777777777777777777777777777777763

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.96  E-value=2.1e-10  Score=58.22  Aligned_cols=38  Identities=29%  Similarity=0.569  Sum_probs=19.7

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHH
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                      +++|++++||.|++|++.|...+.|..|++. |.++.+|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~   39 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRT-HAGESGP   39 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGG-GCCCCSC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHh-cCCCCCC
Confidence            3445555555555555555555555555543 4444343

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.6e-11  Score=63.84  Aligned_cols=41  Identities=27%  Similarity=0.508  Sum_probs=24.5

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HTGERHSGP   43 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHH-HTCCCBTTT
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHH-cCCCCCCCC
Confidence            45556666666666666666666666666554 445545544

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-11  Score=62.34  Aligned_cols=41  Identities=29%  Similarity=0.462  Sum_probs=25.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT-HTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTT-TCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhh-cCCCCCCCC
Confidence            55566666677777777777777777777654 555555443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=59.38  Aligned_cols=39  Identities=28%  Similarity=0.583  Sum_probs=31.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|++++||.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            6 SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            577778888888888888888888888888888877775

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.96  E-value=7e-11  Score=63.54  Aligned_cols=49  Identities=18%  Similarity=0.246  Sum_probs=35.0

Q ss_pred             hcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCc
Q psy16925         31 RFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPW   80 (166)
Q Consensus        31 ~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   80 (166)
                      .|.....|..|++ .|+++++|.|..|++.|.....|..|++.|++++||
T Consensus         5 ~~~~~~~l~~h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRS-RSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHH-HHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHH-hcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            4556666666765 677777777777777777777777777777777665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.7e-10  Score=59.74  Aligned_cols=39  Identities=33%  Similarity=0.712  Sum_probs=25.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            466666666666666666666666666666666666664

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=59.52  Aligned_cols=39  Identities=38%  Similarity=0.804  Sum_probs=28.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            6 SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            566677777777777777777777777777777777665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=4.2e-10  Score=58.85  Aligned_cols=26  Identities=27%  Similarity=0.462  Sum_probs=15.4

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcccc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWCSR  127 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C~~  127 (166)
                      .....|..|+++|++++||.|++|++
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           23 RDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            45555666666666666666666653

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=59.26  Aligned_cols=39  Identities=36%  Similarity=0.734  Sum_probs=26.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            6 SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            466666777777777777777777776667666666664

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=59.30  Aligned_cols=39  Identities=28%  Similarity=0.572  Sum_probs=27.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            466677777777777777777777777777777776665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=4.8e-10  Score=57.76  Aligned_cols=41  Identities=20%  Similarity=0.456  Sum_probs=24.5

Q ss_pred             cCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCccc
Q psy16925         74 HSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCS  126 (166)
Q Consensus        74 h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~  126 (166)
                      |+++++|.|..|++.|            ...+.|..|+++|++++||.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f------------~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRF------------KRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEEC------------SCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCccc------------CCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5555666665544433            5556666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=59.42  Aligned_cols=39  Identities=38%  Similarity=0.709  Sum_probs=26.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            6 SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            466666666666666666666666666666666666664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-11  Score=63.49  Aligned_cols=41  Identities=27%  Similarity=0.481  Sum_probs=27.1

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRL-HSREKSSGP   43 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHH-HHHTTCCCS
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHH-hCCCCCCCC
Confidence            55666677777777777777777777777664 555555544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-11  Score=62.64  Aligned_cols=41  Identities=24%  Similarity=0.470  Sum_probs=28.8

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKT-HSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTT-SSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHH-cCCCCCCCC
Confidence            56677777777777777777777777777764 555555444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=59.03  Aligned_cols=39  Identities=33%  Similarity=0.598  Sum_probs=28.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            6 SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            567777777777777777777777777777777777663

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=59.44  Aligned_cols=39  Identities=38%  Similarity=0.768  Sum_probs=28.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            566777777777777777777777777777777777765

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=59.36  Aligned_cols=39  Identities=33%  Similarity=0.732  Sum_probs=26.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            466666777777777777777777777667666666664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=59.35  Aligned_cols=39  Identities=33%  Similarity=0.738  Sum_probs=25.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            6 SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            456666666666666666666666666666666666664

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.4e-11  Score=62.51  Aligned_cols=41  Identities=27%  Similarity=0.532  Sum_probs=23.3

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|++|++.|.....|..|++. |.++.+|.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRV-HSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGG-SCCSCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCCCC
Confidence            34455566666666666666666666666553 444444443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.3e-10  Score=59.31  Aligned_cols=39  Identities=28%  Similarity=0.636  Sum_probs=26.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            466666777777777777777777776666666666664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2e-10  Score=59.49  Aligned_cols=22  Identities=27%  Similarity=0.409  Sum_probs=11.0

Q ss_pred             CCchhHHHHhhhhcCCCCcccC
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCP  123 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~  123 (166)
                      ...+.|..|+++|++++||.|+
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A           23 KTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCHHHHHHHHHhcCCCCCCCCC
Confidence            4444455555555555555543

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3e-10  Score=58.83  Aligned_cols=41  Identities=27%  Similarity=0.477  Sum_probs=21.0

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-HTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTT-TTTSSCCCC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHh-hCCCCCCCC
Confidence            44455555555555555555555555555543 444444433

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.5e-10  Score=59.10  Aligned_cols=39  Identities=38%  Similarity=0.762  Sum_probs=29.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            6 SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            567777777777777777777777777777777777775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.95  E-value=2.8e-10  Score=57.67  Aligned_cols=38  Identities=34%  Similarity=0.678  Sum_probs=29.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            57777788888888888888888888877877777765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.8e-10  Score=58.93  Aligned_cols=24  Identities=25%  Similarity=0.188  Sum_probs=12.5

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      ...+.|..|+++|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           23 SGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555555555555555544

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.4e-10  Score=58.59  Aligned_cols=39  Identities=31%  Similarity=0.566  Sum_probs=17.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~   41 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRV-HTGEKPS   41 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGG-GCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCC
Confidence            33444444445555555555555555555443 3333333

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=59.21  Aligned_cols=41  Identities=32%  Similarity=0.453  Sum_probs=19.3

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRI-HTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTT-TSCCCCCSS
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHH-hCCCCCCCC
Confidence            34444455555555555555555555555443 344434333

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.4e-10  Score=59.21  Aligned_cols=24  Identities=25%  Similarity=0.360  Sum_probs=12.8

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      .....|..|++.|++++||.|++|
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           23 RYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CChHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555555555555555544

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.5e-11  Score=63.02  Aligned_cols=41  Identities=22%  Similarity=0.352  Sum_probs=28.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS-HERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHH-HHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHH-hCCCCCCCC
Confidence            56667777777777777777777777777764 555555554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.4e-10  Score=58.62  Aligned_cols=40  Identities=25%  Similarity=0.466  Sum_probs=18.5

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY  150 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  150 (166)
                      |+++|++++||.|+.|++.|.....|..|++. |.++.+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~   42 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKI-HTGERPSG   42 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTT-TSCCCCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHH-hCCCCCCC
Confidence            34444444455555555555555555555443 33433433

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.2e-10  Score=59.42  Aligned_cols=39  Identities=31%  Similarity=0.678  Sum_probs=25.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            456666666666666666666666666666666666654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.8e-11  Score=62.13  Aligned_cols=41  Identities=32%  Similarity=0.545  Sum_probs=26.6

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRT-HTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHH-TTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHH-hCCCCCCCC
Confidence            55666677777777777777777777777664 555555443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.8e-10  Score=58.36  Aligned_cols=38  Identities=16%  Similarity=0.335  Sum_probs=26.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            6 SGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             ccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            46667777777777777777777777777777776665

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.3e-10  Score=58.64  Aligned_cols=38  Identities=34%  Similarity=0.671  Sum_probs=23.9

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            6 SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            45566666666666666666666666666666666655

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4e-10  Score=58.37  Aligned_cols=41  Identities=27%  Similarity=0.528  Sum_probs=19.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-HTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGG-GTTCCCSSC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHh-cCCCCCCCC
Confidence            34445555555555555555555555555443 344444333

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.8e-10  Score=58.40  Aligned_cols=31  Identities=32%  Similarity=0.710  Sum_probs=14.4

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhh
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      |+++|++++||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR   33 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHG
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHH
Confidence            3344444444444444444444444444444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.4e-11  Score=61.88  Aligned_cols=41  Identities=17%  Similarity=0.320  Sum_probs=26.3

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKT-HAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGG-GCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCcCC
Confidence            55566666777777777777777777777664 555555444

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.7e-10  Score=57.20  Aligned_cols=37  Identities=24%  Similarity=0.598  Sum_probs=19.7

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHH
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                      +++|++++||.|++|++.|...+.|..|++. |.++.+
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   38 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKM-HTVKSG   38 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHH-TSCCSS
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHH-hCCCCC
Confidence            3445555555555555555555555555553 444444

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.94  E-value=2.6e-10  Score=59.10  Aligned_cols=41  Identities=27%  Similarity=0.508  Sum_probs=19.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|.....|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRI-HTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHH-HTTSCSSSS
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHH-hCCCCCCCC
Confidence            34445555555555555555555555555443 344444433

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.4e-11  Score=61.78  Aligned_cols=40  Identities=23%  Similarity=0.405  Sum_probs=26.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY  150 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  150 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI-HTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHH-HHSCCSSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHH-cCCCCCCC
Confidence            45567777777777777777777777777664 55554443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.4e-10  Score=58.58  Aligned_cols=41  Identities=29%  Similarity=0.524  Sum_probs=20.2

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~C   43 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRI-HTGEKPSGP   43 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGG-TSSCCSSCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHh-cCCCCCcCC
Confidence            34445555555555555555555555555443 444444433

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.1e-10  Score=58.77  Aligned_cols=30  Identities=30%  Similarity=0.749  Sum_probs=13.9

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhh
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      +++|++++||.|+.|++.|...+.|..|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQK   33 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHH
Confidence            334444444444444444444444444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.9e-10  Score=58.81  Aligned_cols=41  Identities=29%  Similarity=0.542  Sum_probs=20.2

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~~C   43 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-HTGEKPSGP   43 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHH-HHSCCCSSS
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHh-cCCCCCCCC
Confidence            44445555555555555555555555555443 344444443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4e-10  Score=58.31  Aligned_cols=40  Identities=30%  Similarity=0.497  Sum_probs=18.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY  150 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  150 (166)
                      |+++|++++||.|+.|++.|.....|..|++. |.++.+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~   42 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-HTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTT-TCCSCCSS
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHH-hCCCCCCC
Confidence            34444445555555555555555555555443 33433433

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.1e-10  Score=58.73  Aligned_cols=41  Identities=27%  Similarity=0.462  Sum_probs=21.2

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-HSGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHH-HCCCSCSCT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHH-cCCCCCCCC
Confidence            44455555555555555555555555555543 444444444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.92  E-value=3.7e-11  Score=61.03  Aligned_cols=39  Identities=21%  Similarity=0.454  Sum_probs=25.0

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~~k~~   40 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CSQSGPS   40 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHH-TTCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhh-cCCCCCC
Confidence            44556666777777777777777777777664 5555443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.92  E-value=9.1e-10  Score=56.14  Aligned_cols=39  Identities=23%  Similarity=0.428  Sum_probs=27.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            456667777777777777777777777777777777664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.3e-10  Score=58.62  Aligned_cols=39  Identities=31%  Similarity=0.724  Sum_probs=30.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            577777788888888888888888787777777777775

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.6e-10  Score=58.49  Aligned_cols=40  Identities=30%  Similarity=0.455  Sum_probs=19.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY  150 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  150 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.++.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~   42 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRI-HRGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGG-GCSCCCCS
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhH-hCCCCCCC
Confidence            34445555555555555555555555555443 34443433

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.4e-10  Score=58.60  Aligned_cols=39  Identities=23%  Similarity=0.433  Sum_probs=27.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCC-CCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSD-DAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~-~~~~~c~   83 (166)
                      .|++++||.|..|++.|.....|..|++.|++ +++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46667777777777777777777777777777 6777664

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.3e-10  Score=58.60  Aligned_cols=41  Identities=29%  Similarity=0.511  Sum_probs=21.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-HTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHT-SCSSSSSCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hCCCCCCCC
Confidence            44455555555555555555555555555543 444444443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.7e-10  Score=58.06  Aligned_cols=22  Identities=32%  Similarity=0.570  Sum_probs=11.4

Q ss_pred             CCchhHHHHhhhhcCCCCcccC
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCP  123 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~  123 (166)
                      ...+.|..|+++|++++||.|+
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A           23 TQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCCC
Confidence            4444555555555555555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.5e-10  Score=57.91  Aligned_cols=38  Identities=34%  Similarity=0.687  Sum_probs=24.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|++++||.|..|++.|.....|..|++.|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             ccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45666666666666666666666666666666666654

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.4e-10  Score=58.62  Aligned_cols=39  Identities=28%  Similarity=0.637  Sum_probs=23.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455556666666666666666666666666665655554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.9e-10  Score=58.28  Aligned_cols=38  Identities=34%  Similarity=0.802  Sum_probs=21.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45555555555555555555555555555555555544

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.1e-10  Score=58.19  Aligned_cols=38  Identities=32%  Similarity=0.691  Sum_probs=25.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|++++||.|..|++.|.....|..|++.|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            46666667777777777766666666666666666654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.4e-10  Score=57.62  Aligned_cols=38  Identities=24%  Similarity=0.483  Sum_probs=25.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            45666666677777777666666666666666666665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.4e-10  Score=56.80  Aligned_cols=39  Identities=36%  Similarity=0.725  Sum_probs=30.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            467777788888888888887888887777777777775

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.3e-11  Score=62.07  Aligned_cols=41  Identities=24%  Similarity=0.462  Sum_probs=24.5

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HTGKKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTT-SCCCCCCCS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHH-hCCCCCCCC
Confidence            45556666666666666666666666666654 455545444

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.5e-10  Score=58.08  Aligned_cols=41  Identities=32%  Similarity=0.542  Sum_probs=20.9

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   43 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-HTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTT-TSSCCSSCS
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCCCC
Confidence            44445555555555555555555555555543 444444433

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.8e-11  Score=61.31  Aligned_cols=40  Identities=18%  Similarity=0.330  Sum_probs=28.3

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLY  150 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  150 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~   42 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI-HTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHH-HCCCCCCS
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHH-hCCCCCCC
Confidence            56677777777787788888777777777765 55555543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1e-09  Score=55.31  Aligned_cols=38  Identities=39%  Similarity=0.708  Sum_probs=28.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            46677777777777777777777777777777777765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.4e-09  Score=56.28  Aligned_cols=39  Identities=28%  Similarity=0.520  Sum_probs=28.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            466677777777777777777777777777777777764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.6e-09  Score=56.43  Aligned_cols=41  Identities=32%  Similarity=0.514  Sum_probs=28.6

Q ss_pred             hhcCCCCeecc--cchhhcCChHHHHHHHhHcCCCCCccCCcC
Q psy16925         45 VHLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPWKCDIC   85 (166)
Q Consensus        45 ~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C   85 (166)
                      .|+++++|.|.  .|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46667777776  677777777777777777777777776654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2.9e-10  Score=58.89  Aligned_cols=39  Identities=36%  Similarity=0.632  Sum_probs=28.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|++++||.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            6 SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777777777777777777777777777777777664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3e-10  Score=58.81  Aligned_cols=39  Identities=38%  Similarity=0.744  Sum_probs=25.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            6 SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            466666666666666666666666666666666666654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.3e-10  Score=58.21  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=21.8

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.++.+|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   43 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-HTQETLSGP   43 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHH-HSSCCSSSC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHH-hCCCCCCCC
Confidence            44455555555555555555555555555553 344444433

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.9e-11  Score=60.31  Aligned_cols=39  Identities=26%  Similarity=0.430  Sum_probs=26.7

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHH
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                      |+++|++++||.|++|++.|...+.|..|++. |.++.++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~   41 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERT-HAGVSGP   41 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGG-GSSCSCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhH-hcCCCCC
Confidence            56667777777777777777777777777764 5555443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3.8e-10  Score=57.84  Aligned_cols=38  Identities=24%  Similarity=0.464  Sum_probs=27.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|++++||.|..|++.|.....|..|++.|++++||.|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            56677777777777777777777777777777777665

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.5e-10  Score=56.34  Aligned_cols=38  Identities=32%  Similarity=0.589  Sum_probs=28.0

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      .|+++++|.|.+|++.|.....|..|++.|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            6 SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            56777777777777777777777777777777777664

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.1e-09  Score=56.11  Aligned_cols=38  Identities=21%  Similarity=0.274  Sum_probs=19.1

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHH
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                      +++|++++||.|++|++.|...+.|..|++. |.++.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~   41 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQAL-HAGESGP   41 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHH-HTTSCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHH-HCCCCCC
Confidence            3445555555555555555555555555543 3444333

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.82  E-value=3.5e-09  Score=53.90  Aligned_cols=22  Identities=18%  Similarity=0.199  Sum_probs=11.8

Q ss_pred             CCchhHHHHhhhhcCCCCcccC
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCP  123 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~  123 (166)
                      ...+.|..|+++|++++||.|+
T Consensus        21 ~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A           21 SEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CChHHHHHHHHhhCCCCCccCC
Confidence            4455555555555555555554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.9e-10  Score=57.35  Aligned_cols=36  Identities=25%  Similarity=0.465  Sum_probs=23.2

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcchhHHH
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                      +|++++||.|++|++.|...+.|..|++. |.++.+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~   39 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERI-HTGSGPS   39 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGG-CCCCSCS
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHH-hCCCCCc
Confidence            45666677777777777777777777654 5555444

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.4e-09  Score=56.64  Aligned_cols=24  Identities=25%  Similarity=0.379  Sum_probs=13.8

Q ss_pred             CCchhHHHHhhhhcCCCCcccCcc
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      .....|..|+++|++++||.|+.|
T Consensus        25 ~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           25 SRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455555566655655566655554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2e-10  Score=66.14  Aligned_cols=64  Identities=19%  Similarity=0.205  Sum_probs=48.0

Q ss_pred             HHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcch
Q psy16925         66 ILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus        66 ~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      .|..|++.+.+.+++.|..|+..|             ....|..|. .+.+++|+.|+.|++.|. ...|..|++. |++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-------------~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~-c~~   67 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-------------SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV-CGR   67 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-------------CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH-BTT
T ss_pred             HHHhhCcccCCCcccCCcccChHh-------------hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH-ccC
Confidence            345566677778888887766655             366788888 788888899999988877 4788888875 443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.79  E-value=1.5e-09  Score=53.33  Aligned_cols=35  Identities=31%  Similarity=0.694  Sum_probs=31.0

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      |+++|++++||.|+.|++.|...+.|..|++. |.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH-hcc
Confidence            67889999999999999999999999999886 443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4e-09  Score=54.48  Aligned_cols=22  Identities=23%  Similarity=0.490  Sum_probs=12.1

Q ss_pred             CCchhHHHHhhhhcCCCCcccC
Q psy16925        102 DESKDLKNHHNLHTGKRPYTCP  123 (166)
Q Consensus       102 ~~~~~l~~H~~~h~~~~p~~C~  123 (166)
                      .....|..|+++|++++||.|.
T Consensus        23 ~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A           23 LQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CChHHHHHHHHHhCCCCCCCCC
Confidence            4455555555555555555553

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.6e-09  Score=55.71  Aligned_cols=38  Identities=29%  Similarity=0.579  Sum_probs=19.7

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      +|++++||.|+.|++.|.....|..|++. |.++.+|.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C   43 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRI-HTGEKSGPS   43 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTT-TSSCCCCCS
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHH-hCCCCCCCC
Confidence            44555555555555555555555555543 444444433

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.76  E-value=6.9e-09  Score=51.54  Aligned_cols=37  Identities=24%  Similarity=0.461  Sum_probs=28.0

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKC   82 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   82 (166)
                      |+++++|.|..|++.|.....|..|++.|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4567778888888888888888888888877777764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=8.1e-10  Score=61.57  Aligned_cols=38  Identities=26%  Similarity=0.502  Sum_probs=25.5

Q ss_pred             hcCCCCcccCc--ccccccCChhhhhhhhhhcchhHHHHH
Q psy16925        114 HTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPEELKLYE  151 (166)
Q Consensus       114 h~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c  151 (166)
                      .++++||+|+.  |+++|...+.|..|++..|+++.|+.|
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            45677777754  777777777777776555777666554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=6.8e-10  Score=65.83  Aligned_cols=43  Identities=21%  Similarity=0.461  Sum_probs=37.2

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSK   87 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~   87 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++||.|..+..
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            5788899999999999999999999999999888998876553

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=1.4e-08  Score=56.54  Aligned_cols=40  Identities=25%  Similarity=0.370  Sum_probs=32.6

Q ss_pred             hcCCCCeeccc--chhhcCChHHHHHHH-hHcCCCCCccCCcC
Q psy16925         46 HLGERPFVCHE--CGQSFASKGILQEHL-TIHSDDAPWKCDIC   85 (166)
Q Consensus        46 h~~~~~~~C~~--C~~~f~~~~~l~~h~-~~h~~~~~~~c~~C   85 (166)
                      +++++||+|.+  |++.|.....|..|+ ++|++++|+.|..-
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            56788888865  889998888888886 57888888887653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=2.5e-09  Score=63.37  Aligned_cols=46  Identities=17%  Similarity=0.325  Sum_probs=33.0

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhHHHHHHHhhh
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYESSLGK  156 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~c~~  156 (166)
                      +.++|++++||.|+.|++.|.....|..|++. |+++.++.|..|.+
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~-Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNI-HNEEFQKRAKRQER   61 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHH-HHHHHHHHCCCCSC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHH-hCCCCCcccchhhh
Confidence            34567777778888888888777777777764 67777777766653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.65  E-value=2.2e-08  Score=48.21  Aligned_cols=34  Identities=26%  Similarity=0.410  Sum_probs=27.6

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCCC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAP   79 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   79 (166)
                      |+++++|.|..|++.|.....|..|++.|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5678888888888888888888888888877653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.64  E-value=3.2e-09  Score=52.78  Aligned_cols=34  Identities=26%  Similarity=0.523  Sum_probs=20.4

Q ss_pred             cCCCCcccCcccccccCChhhhhhhhhhcchhHHH
Q psy16925        115 TGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELKL  149 (166)
Q Consensus       115 ~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  149 (166)
                      ++++||.|++|++.|...+.|..|++. |.++.++
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~   35 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNV-HRRDRAR   35 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHT-TCCSCTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHH-cCCCccc
Confidence            455666666666666666666666654 4444443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.63  E-value=2.6e-08  Score=48.02  Aligned_cols=34  Identities=38%  Similarity=0.777  Sum_probs=27.5

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCCC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDAP   79 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   79 (166)
                      |+++++|.|..|++.|.....|..|++.|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6678888888888888888888888888877653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.63  E-value=6.4e-09  Score=50.20  Aligned_cols=32  Identities=28%  Similarity=0.570  Sum_probs=27.0

Q ss_pred             hcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       114 h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      |++++||.|+.|++.|...+.|..|++. |.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIRE-VHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHH-TSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHH-HcCC
Confidence            6788899999999999999999999886 4444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=5.7e-09  Score=51.27  Aligned_cols=34  Identities=15%  Similarity=0.307  Sum_probs=28.9

Q ss_pred             hhhcCCCCcccCcccccccCChhhhhh-hhhhcchh
Q psy16925        112 NLHTGKRPYTCPWCSRTFANGSNCRSH-KRRMHPEE  146 (166)
Q Consensus       112 ~~h~~~~p~~C~~C~~~f~~~~~l~~H-~~~~h~~~  146 (166)
                      ++|++++||.|+.|++.|...+.|..| ++. |+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~-H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQK-HSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHH-TCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHH-ccCc
Confidence            468899999999999999999999999 654 6553

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=9.1e-09  Score=50.36  Aligned_cols=34  Identities=26%  Similarity=0.631  Sum_probs=28.5

Q ss_pred             hhhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        112 NLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       112 ~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      ++|++++||.|+.|++.|...+.|..|++. |.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-h~~~   35 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKT-NHPE   35 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHH-HCSS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHH-HcCC
Confidence            467889999999999999999999999886 4443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.61  E-value=1.1e-08  Score=53.37  Aligned_cols=36  Identities=22%  Similarity=0.469  Sum_probs=28.2

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcchhHH
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                      +|++++||.|.+|++.|.....|..|++..|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            478899999999999999999999999844666543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.60  E-value=7.8e-09  Score=50.53  Aligned_cols=26  Identities=19%  Similarity=0.386  Sum_probs=23.8

Q ss_pred             hcCCCCcccCcccccccCChhhhhhh
Q psy16925        114 HTGKRPYTCPWCSRTFANGSNCRSHK  139 (166)
Q Consensus       114 h~~~~p~~C~~C~~~f~~~~~l~~H~  139 (166)
                      +.+++||.|++|+++|...++|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46789999999999999999999997

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.6e-08  Score=48.63  Aligned_cols=35  Identities=17%  Similarity=0.516  Sum_probs=28.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDDAP   79 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   79 (166)
                      .|+++++|.|..|++.|.....|..|++.|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            47778888888888888888888888888877654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.60  E-value=7e-09  Score=50.11  Aligned_cols=33  Identities=33%  Similarity=0.794  Sum_probs=27.2

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +|++++||.|++|++.|...+.|..|++. |.++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   33 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKV-HTDT   33 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGG-GTSC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHH-cCCC
Confidence            36788899999999999999999999886 5444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.1e-09  Score=62.95  Aligned_cols=65  Identities=23%  Similarity=0.324  Sum_probs=47.8

Q ss_pred             HHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcC
Q psy16925         37 AVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTG  116 (166)
Q Consensus        37 ~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~  116 (166)
                      .|..|++ .+.+++++.|..|+..|. ...|..|+ .+.+++++.|+.|++.+            . ...|..|++++.+
T Consensus         4 ~L~~H~~-~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~------------~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            4 GSSGHEE-TECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNV------------L-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCSCCCC-CCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEE------------E-TTGGGTHHHHBTT
T ss_pred             HHHhhCc-ccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcC------------c-HHHHHHHHHHccC
Confidence            3455654 577888888888888884 78888888 78888888888777654            2 3557778877766


Q ss_pred             C
Q psy16925        117 K  117 (166)
Q Consensus       117 ~  117 (166)
                      +
T Consensus        68 ~   68 (75)
T 2d9k_A           68 E   68 (75)
T ss_dssp             B
T ss_pred             C
Confidence            5

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.4e-08  Score=50.31  Aligned_cols=33  Identities=15%  Similarity=0.275  Sum_probs=27.8

Q ss_pred             hhcCCCCcccCc--ccccccCChhhhhhhhhhcchh
Q psy16925        113 LHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       113 ~h~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      .+++++||+|++  |+++|...+.|..|++. |+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~-Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKV-HTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHH-HSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCCC
Confidence            367899999986  99999999999999886 5553

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.53  E-value=3.3e-08  Score=48.26  Aligned_cols=32  Identities=31%  Similarity=0.546  Sum_probs=25.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      .|++++||.|+.|++.|.....|..|++.|++
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            57778888888888888888888888877765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.52  E-value=7.2e-08  Score=45.92  Aligned_cols=30  Identities=30%  Similarity=0.547  Sum_probs=17.4

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCCCCCc
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSDDAPW   80 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   80 (166)
                      ||.|..|++.|.....|..|++.|+++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555666666555565565555555554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=2.8e-08  Score=48.55  Aligned_cols=33  Identities=24%  Similarity=0.519  Sum_probs=28.3

Q ss_pred             hhhcCCCCcccCcccccccCC-hhhhhhhhhhcch
Q psy16925        112 NLHTGKRPYTCPWCSRTFANG-SNCRSHKRRMHPE  145 (166)
Q Consensus       112 ~~h~~~~p~~C~~C~~~f~~~-~~l~~H~~~~h~~  145 (166)
                      ++|++++||.|+.|++.|... +.|..|++. |++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~-H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWA-HEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHH-HHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHh-cCC
Confidence            357889999999999999999 999999886 544

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=3e-08  Score=48.13  Aligned_cols=33  Identities=24%  Similarity=0.419  Sum_probs=28.4

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      .|++++||.|++|++.|...+.|..|++. |+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLV-HGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTT-TSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHH-hcCC
Confidence            47788999999999999999999999886 5553

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=3.9e-08  Score=47.71  Aligned_cols=33  Identities=27%  Similarity=0.599  Sum_probs=28.4

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +|++++||.|++|++.|...+.|..|++. |+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNR-HSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHH-SSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHH-hccC
Confidence            57889999999999999999999999886 5543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=1.2e-07  Score=46.82  Aligned_cols=33  Identities=27%  Similarity=0.324  Sum_probs=27.2

Q ss_pred             hhcCCCCeeccc--chhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHE--CGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      .+++++||+|..  |++.|.....|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            356788899976  999999999999998888764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.2e-07  Score=45.82  Aligned_cols=33  Identities=27%  Similarity=0.523  Sum_probs=27.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      .|++++||.|..|++.|.....|..|++.|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            477788888888888888888888888888765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=1e-07  Score=46.80  Aligned_cols=35  Identities=29%  Similarity=0.624  Sum_probs=25.5

Q ss_pred             hcCCCCeecc--cchhhcCChHHHHHHHhHcCCCCCc
Q psy16925         46 HLGERPFVCH--ECGQSFASKGILQEHLTIHSDDAPW   80 (166)
Q Consensus        46 h~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~   80 (166)
                      |+++++|.|.  .|++.|.....|..|++.|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4567777777  4777777777777777777776665

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.5e-07  Score=45.52  Aligned_cols=33  Identities=30%  Similarity=0.534  Sum_probs=27.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      .|++++||.|..|++.|.....|..|++.|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            467888888988998888888888888888765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=5.8e-08  Score=47.02  Aligned_cols=32  Identities=34%  Similarity=0.619  Sum_probs=27.6

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      +|.+++||.|+.|++.|.....|..|++. |++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRK-HTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHH-HTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHH-ccC
Confidence            47788999999999999999999999886 444

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.4e-07  Score=45.66  Aligned_cols=33  Identities=21%  Similarity=0.422  Sum_probs=26.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      .|++++||.|..|++.|.....|..|++.|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            467788888888888888888888888887764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.5e-07  Score=45.44  Aligned_cols=33  Identities=33%  Similarity=0.709  Sum_probs=25.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      .|+++++|.|..|++.|.....|..|++.|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            466777888888888888888888888777665

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=4.1e-08  Score=48.26  Aligned_cols=34  Identities=29%  Similarity=0.667  Sum_probs=24.6

Q ss_pred             hcCCCCcccC--cccccccCChhhhhhhhhhcchhHH
Q psy16925        114 HTGKRPYTCP--WCSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus       114 h~~~~p~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                      |++++||.|+  .|++.|...+.|..|++. |.++.+
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHK-HEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHH-HHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            4567788888  488888888888888775 555543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.3e-07  Score=46.08  Aligned_cols=33  Identities=24%  Similarity=0.341  Sum_probs=26.2

Q ss_pred             hhcCCCCeecccchhhcCCh-HHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASK-GILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~-~~l~~h~~~h~~~   77 (166)
                      .|++++||.|..|++.|... ..|..|++.|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46778888888888888888 8888888877654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2.5e-07  Score=44.69  Aligned_cols=33  Identities=33%  Similarity=0.612  Sum_probs=26.4

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      .|.++++|.|..|++.|.....|..|++.|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            466778888888888888888888888888765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.3e-07  Score=45.70  Aligned_cols=32  Identities=22%  Similarity=0.446  Sum_probs=27.1

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      .|.+++||.|++|++.|.....|..|++. |++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLL-HTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHH-HSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHH-hcC
Confidence            46788899999999999999999999886 444

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.37  E-value=4.2e-08  Score=50.83  Aligned_cols=38  Identities=26%  Similarity=0.465  Sum_probs=31.7

Q ss_pred             HHHhhhhcCCCCcccC--cccccccCChhhhhhhhhhcchh
Q psy16925        108 KNHHNLHTGKRPYTCP--WCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       108 ~~H~~~h~~~~p~~C~--~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      ..|...|++++||.|+  .|++.|...+.|..|++. |+++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~-H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHH-HTTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHH-ccCC
Confidence            3456679999999995  799999999999999986 5553

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.37  E-value=1.8e-07  Score=48.60  Aligned_cols=35  Identities=20%  Similarity=0.507  Sum_probs=27.3

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHh-HcCCCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLT-IHSDDAP   79 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~   79 (166)
                      +|+++++|.|..|++.|.....|..|++ .|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3778889999999999999999999988 8877643

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.37  E-value=4.3e-08  Score=46.74  Aligned_cols=22  Identities=23%  Similarity=0.684  Sum_probs=11.5

Q ss_pred             CcccCcccccccCChhhhhhhh
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      ||.|++|++.|...+.|..|++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~   23 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHIT   23 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH
T ss_pred             cccCCCCCchhCCHHHHHHHHH
Confidence            4555555555555555555544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.4e-07  Score=45.62  Aligned_cols=32  Identities=22%  Similarity=0.549  Sum_probs=27.1

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      .|.+++||.|+.|++.|.....|..|++. |.+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRI-HTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHH-HCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHH-hCC
Confidence            46778899999999999999999999886 444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.34  E-value=2e-07  Score=45.45  Aligned_cols=26  Identities=35%  Similarity=0.687  Sum_probs=21.0

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHH
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHL   71 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~   71 (166)
                      +.+++||.|..|++.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45678888888888888888888887

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.9e-07  Score=44.88  Aligned_cols=33  Identities=24%  Similarity=0.411  Sum_probs=27.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHH-HhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEH-LTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~~~   77 (166)
                      .|++++||.|..|++.|.....|..| ++.|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            57788899999999999999999999 7877653

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=1.8e-07  Score=42.21  Aligned_cols=26  Identities=27%  Similarity=0.627  Sum_probs=22.9

Q ss_pred             CCCcccCcccccccCChhhhhhhhhh
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      ++||.|+.|++.|...+.|..|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            47899999999999999999998763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=2.5e-07  Score=41.64  Aligned_cols=25  Identities=24%  Similarity=0.606  Sum_probs=22.3

Q ss_pred             CCCcccCcccccccCChhhhhhhhh
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      ++||.|+.|++.|...+.|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHH
Confidence            4789999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.28  E-value=2.9e-08  Score=46.96  Aligned_cols=30  Identities=17%  Similarity=0.427  Sum_probs=23.4

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcchhHH
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHPEELK  148 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  148 (166)
                      +||.|++|++.|...+.|..|++. |+++.+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~-H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKT-AFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTS-SSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHH-HccCCC
Confidence            478888888888888888888875 666543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.26  E-value=3.8e-07  Score=41.94  Aligned_cols=29  Identities=24%  Similarity=0.660  Sum_probs=23.0

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +||.|+.|++.|...+.|..|+...|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            47899999999999999999943346654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.25  E-value=5.4e-07  Score=43.88  Aligned_cols=32  Identities=25%  Similarity=0.639  Sum_probs=25.0

Q ss_pred             hcCCCCeeccc--chhhcCChHHHHHHHhHcCCC
Q psy16925         46 HLGERPFVCHE--CGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        46 h~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      |+++++|.|.+  |++.|.....|..|++.|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            66778888874  888888888888888877664

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.25  E-value=2.1e-07  Score=45.39  Aligned_cols=32  Identities=28%  Similarity=0.516  Sum_probs=26.9

Q ss_pred             hcCCCCcccC--cccccccCChhhhhhhhhhcchh
Q psy16925        114 HTGKRPYTCP--WCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       114 h~~~~p~~C~--~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      |++++||.|.  .|++.|...+.|..|++. |+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW-HTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHH-HHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCCC
Confidence            6788999998  499999999999999886 5554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.24  E-value=8.1e-07  Score=40.65  Aligned_cols=29  Identities=34%  Similarity=0.756  Sum_probs=20.6

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ++||.|..|++.|.....|..|++.|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35677777777777777777777776654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.24  E-value=5.2e-07  Score=41.35  Aligned_cols=27  Identities=30%  Similarity=0.699  Sum_probs=21.7

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcc
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      +||.|+.|++.|...+.|..|++.|+.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            468888888888888888888886553

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=3.8e-07  Score=41.30  Aligned_cols=26  Identities=31%  Similarity=0.701  Sum_probs=23.0

Q ss_pred             CCCcccCcccccccCChhhhhhhhhh
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      ++||.|+.|++.|...+.|..|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhc
Confidence            47899999999999999999998863

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.19  E-value=6.1e-07  Score=49.91  Aligned_cols=28  Identities=18%  Similarity=0.477  Sum_probs=16.5

Q ss_pred             hcCCCCcccCcccccccCChhhhhhhhh
Q psy16925        114 HTGKRPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       114 h~~~~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      +.+++||.|.+|++.|...+.|..|++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~   35 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQ   35 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhh
Confidence            3445566666666666666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.17  E-value=7.4e-07  Score=40.57  Aligned_cols=27  Identities=22%  Similarity=0.535  Sum_probs=22.4

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcch
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      +||.|+.|++.|...+.|..|++. |.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILL-HEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTG-GGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHH-hcC
Confidence            478899999999999999999886 544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.17  E-value=1.1e-06  Score=40.02  Aligned_cols=28  Identities=29%  Similarity=0.648  Sum_probs=18.5

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +||.|..|++.|.....|..|++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566777777777777777776666543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.17  E-value=5.4e-08  Score=45.99  Aligned_cols=29  Identities=21%  Similarity=0.441  Sum_probs=15.6

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCCCCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSDDAP   79 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   79 (166)
                      ||.|..|++.|.....|..|++.|++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            45555555555555555555555555444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.4e-07  Score=41.29  Aligned_cols=25  Identities=32%  Similarity=0.796  Sum_probs=21.9

Q ss_pred             CCcccCcccccccCChhhhhhhhhh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      +||.|+.|++.|...+.|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5799999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.16  E-value=5.9e-07  Score=41.16  Aligned_cols=28  Identities=29%  Similarity=0.778  Sum_probs=23.0

Q ss_pred             CCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      ++||.|+.|++.|.....|..|++. |.+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~-h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLET-HDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHT-TCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHH-hcc
Confidence            4688999999999999999999876 444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.16  E-value=1.4e-06  Score=38.96  Aligned_cols=26  Identities=35%  Similarity=0.685  Sum_probs=19.5

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHc
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      ++||.|..|++.|.....|..|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35777777888887777777777765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=8.3e-07  Score=40.27  Aligned_cols=24  Identities=25%  Similarity=0.667  Sum_probs=20.6

Q ss_pred             CCcccCcccccccCChhhhhhhhh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      +||.|+.|++.|...+.|..|++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH
Confidence            478899999999999999999876

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=1.3e-06  Score=40.85  Aligned_cols=29  Identities=34%  Similarity=0.830  Sum_probs=23.3

Q ss_pred             CCCcccC--cccccccCChhhhhhhhhhcchh
Q psy16925        117 KRPYTCP--WCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       117 ~~p~~C~--~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      ++||.|+  .|++.|...+.|..|++. |+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKS-HQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGG-GTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHH-ccCC
Confidence            4688998  899999999999999886 5443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.15  E-value=1.6e-06  Score=39.36  Aligned_cols=27  Identities=33%  Similarity=0.787  Sum_probs=15.9

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ||.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455666666666666666666555543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3.1e-07  Score=42.01  Aligned_cols=28  Identities=32%  Similarity=0.740  Sum_probs=23.2

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +||.|+.|++.|...+.|..|++. |.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQ-HTGE   28 (29)
Confidence            478999999999999999999886 5443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=1.2e-06  Score=39.31  Aligned_cols=26  Identities=27%  Similarity=0.543  Sum_probs=18.8

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHc
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      ++||.|..|++.|.....|..|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35677777777777777777777665

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=1.8e-06  Score=48.01  Aligned_cols=33  Identities=21%  Similarity=0.375  Sum_probs=28.5

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCCC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDDA   78 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   78 (166)
                      +.+++||.|..|++.|.....|..|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            567889999999999999999999999998754

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.13  E-value=9.8e-07  Score=40.10  Aligned_cols=25  Identities=32%  Similarity=0.735  Sum_probs=20.5

Q ss_pred             CCcccCcccccccCChhhhhhhhhh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      +||.|+.|++.|...+.|..|++.|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHh
Confidence            4788888888888888888888763

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=1.6e-06  Score=39.13  Aligned_cols=27  Identities=33%  Similarity=0.863  Sum_probs=19.5

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcC
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~   75 (166)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            356777777777777777777777664

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.12  E-value=2.2e-06  Score=39.99  Aligned_cols=28  Identities=29%  Similarity=0.694  Sum_probs=18.7

Q ss_pred             CCeecc--cchhhcCChHHHHHHHhHcCCC
Q psy16925         50 RPFVCH--ECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        50 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +||.|.  .|++.|.....|..|++.|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            466676  6777777777777776666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.40  E-value=3.5e-07  Score=42.07  Aligned_cols=28  Identities=36%  Similarity=0.750  Sum_probs=23.7

Q ss_pred             CCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      ++||.|+.|++.|...+.|..|++. |.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~-h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRI-HTG   28 (30)
Confidence            4689999999999999999999886 444

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=1.4e-06  Score=39.54  Aligned_cols=27  Identities=48%  Similarity=1.074  Sum_probs=16.7

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ||.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            566666666666666666666665543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.10  E-value=2.1e-06  Score=39.20  Aligned_cols=27  Identities=19%  Similarity=0.427  Sum_probs=15.9

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +|.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            455666666666666666665555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.10  E-value=1.4e-06  Score=38.95  Aligned_cols=26  Identities=35%  Similarity=0.763  Sum_probs=20.2

Q ss_pred             CcccCcccccccCChhhhhhhhhhcch
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      ||.|+.|++.|...+.|..|++. |++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~-h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRV-HKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGG-TCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHH-cCC
Confidence            57888899988888888888875 443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.06  E-value=1.5e-06  Score=39.38  Aligned_cols=26  Identities=35%  Similarity=0.695  Sum_probs=14.9

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      ||.|..|++.|.....|..|++.|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            45555566666555555555555544

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.06  E-value=1.5e-06  Score=40.28  Aligned_cols=27  Identities=33%  Similarity=0.930  Sum_probs=21.4

Q ss_pred             CCcccC--cccccccCChhhhhhhhhhcch
Q psy16925        118 RPYTCP--WCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       118 ~p~~C~--~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      +||.|+  .|++.|...+.|..|++. |++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~-H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRT-HTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHH-hcC
Confidence            478887  888888888888888876 544

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.06  E-value=2.5e-06  Score=39.50  Aligned_cols=27  Identities=37%  Similarity=0.858  Sum_probs=16.9

Q ss_pred             Ceecc--cchhhcCChHHHHHHHhHcCCC
Q psy16925         51 PFVCH--ECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        51 ~~~C~--~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ||.|.  .|++.|.....|..|++.|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56665  6666666666666666666544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.06  E-value=8.9e-07  Score=40.21  Aligned_cols=27  Identities=30%  Similarity=0.656  Sum_probs=21.5

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcch
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      +||.|+.|++.|.....|..|++. |.+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRI-HSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHH-HHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHH-hcC
Confidence            478888888888888888888875 444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.2e-07  Score=40.92  Aligned_cols=27  Identities=44%  Similarity=1.013  Sum_probs=16.2

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcCC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      +||.|..|++.|.....|..|++.|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            456666666666666666666655544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.2e-07  Score=40.68  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=14.7

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      ||.|..|++.|.....|..|++.|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45555555555555555555555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.00  E-value=1.8e-06  Score=44.41  Aligned_cols=33  Identities=21%  Similarity=0.596  Sum_probs=26.0

Q ss_pred             hhcCCCCeecc--cchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCH--ECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      .|++++||.|.  .|++.|.....|..|++.|+++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            47778888885  6888888888888888888765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.98  E-value=3e-06  Score=37.74  Aligned_cols=24  Identities=33%  Similarity=0.739  Sum_probs=12.9

Q ss_pred             eecccchhhcCChHHHHHHHhHcC
Q psy16925         52 FVCHECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~h~~~h~   75 (166)
                      |.|..|++.|.....|..|++.|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            455555555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.91  E-value=4.4e-06  Score=38.14  Aligned_cols=26  Identities=31%  Similarity=0.764  Sum_probs=14.3

Q ss_pred             CeecccchhhcCChHHHHHH-HhHcCC
Q psy16925         51 PFVCHECGQSFASKGILQEH-LTIHSD   76 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h-~~~h~~   76 (166)
                      ||.|..|++.|.....|..| ++.|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 344544

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.07  E-value=2e-06  Score=38.06  Aligned_cols=24  Identities=38%  Similarity=0.982  Sum_probs=13.4

Q ss_pred             CeecccchhhcCChHHHHHHHhHc
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      ||.|..|++.|.....|..|++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.74  E-value=9.3e-06  Score=36.63  Aligned_cols=25  Identities=28%  Similarity=0.594  Sum_probs=21.8

Q ss_pred             CCcccC--cccccccCChhhhhhhhhh
Q psy16925        118 RPYTCP--WCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       118 ~p~~C~--~C~~~f~~~~~l~~H~~~~  142 (166)
                      +||.|+  .|++.|...+.|..|++.|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            478999  9999999999999998863

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.72  E-value=2e-05  Score=35.47  Aligned_cols=25  Identities=44%  Similarity=0.990  Sum_probs=16.9

Q ss_pred             Ceecc--cchhhcCChHHHHHHHhHcC
Q psy16925         51 PFVCH--ECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        51 ~~~C~--~C~~~f~~~~~l~~h~~~h~   75 (166)
                      +|.|.  .|++.|.....|..|++.|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  67777777777777766664

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.61  E-value=6.4e-05  Score=41.38  Aligned_cols=47  Identities=21%  Similarity=0.309  Sum_probs=34.1

Q ss_pred             CCCcCCCchhHHHHh-hhhcCCC------CcccC--cccccccCChhhhhhhhhhc
Q psy16925         97 CGWYPDESKDLKNHH-NLHTGKR------PYTCP--WCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus        97 c~~~f~~~~~l~~H~-~~h~~~~------p~~C~--~C~~~f~~~~~l~~H~~~~h  143 (166)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            667777777777776 3565443      68885  68888888888888887654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.21  E-value=0.00046  Score=37.84  Aligned_cols=45  Identities=18%  Similarity=0.307  Sum_probs=21.3

Q ss_pred             hhhhcCChHHHHHHHHHhhcCCC------Ceecc--cchhhcCChHHHHHHHh
Q psy16925         28 MVTRFSSRSAVTAHTKAVHLGER------PFVCH--ECGQSFASKGILQEHLT   72 (166)
Q Consensus        28 C~~~~~~~~~l~~H~~~~h~~~~------~~~C~--~C~~~f~~~~~l~~h~~   72 (166)
                      |++.|.+...|..|+...|.+.+      +|.|.  .|+..+.....|..|++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            44555555555555543444333      34443  34444444444444443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.97  E-value=0.00014  Score=45.15  Aligned_cols=31  Identities=26%  Similarity=0.415  Sum_probs=27.4

Q ss_pred             hhhhcCCCCcccCcccccccCChhhhhhhhh
Q psy16925        111 HNLHTGKRPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       111 ~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      ...++|++||.|..|++.|...+.|..|++.
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            3457889999999999999999999999874

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=96.00  E-value=0.0032  Score=29.64  Aligned_cols=28  Identities=18%  Similarity=0.198  Sum_probs=23.1

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCC
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGE   49 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~   49 (166)
                      .|.|++|.+.+.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            3889999999999999999988777653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.72  E-value=0.0042  Score=31.28  Aligned_cols=23  Identities=26%  Similarity=0.489  Sum_probs=20.1

Q ss_pred             CCcccCcccccccCChhhhhhhh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      .+|.|+.|+..|.....|+.|+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            56889999999999999998886

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.54  E-value=0.0024  Score=39.61  Aligned_cols=29  Identities=21%  Similarity=0.332  Sum_probs=23.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhH
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTI   73 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~   73 (166)
                      .++++++|.|..|++.|.+...|..|++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            46677888888888888888888888654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.30  E-value=0.011  Score=29.84  Aligned_cols=28  Identities=14%  Similarity=0.134  Sum_probs=19.6

Q ss_pred             cCCCCCccchhhhhhhcCChHHHHHHHH
Q psy16925         16 NASTLGKYSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        16 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      +..+.+.|.|+-|+..|+....|..|+.
T Consensus         6 ~~~~~~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A            6 SGQDGGRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SSCCSSCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ccccCCceeCCcccccccchHHHHhhhh
Confidence            3444567777777777777777777765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.26  E-value=0.0054  Score=40.29  Aligned_cols=52  Identities=17%  Similarity=0.252  Sum_probs=33.1

Q ss_pred             ccccCCCcCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchhH
Q psy16925         93 SNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL  147 (166)
Q Consensus        93 ~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~  147 (166)
                      .|+.|+..+ ....+..|....-..++..|+.|+..+.. ..+..|... ++|+.
T Consensus       112 ~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~-~~~~~  163 (170)
T 3hcs_A          112 DCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQN-CPLAL  163 (170)
T ss_dssp             ECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTT-CCC--
T ss_pred             ECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHh-CcChh
Confidence            455666665 45567778776667777778888776653 456777664 55543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.26  E-value=0.017  Score=36.06  Aligned_cols=24  Identities=17%  Similarity=0.108  Sum_probs=19.6

Q ss_pred             CCccchhhhhhhcCChHHHHHHHH
Q psy16925         20 LGKYSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        20 ~~~~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      ...+.|.+|...|.+...+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~   53 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQ   53 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHC
Confidence            345789999999999998888874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.86  E-value=0.023  Score=35.46  Aligned_cols=82  Identities=16%  Similarity=0.180  Sum_probs=52.2

Q ss_pred             CCCeecccchhhcCChHHHHHHH--hHcCCC-CCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCCcccCcc
Q psy16925         49 ERPFVCHECGQSFASKGILQEHL--TIHSDD-APWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRPYTCPWC  125 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~--~~h~~~-~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p~~C~~C  125 (166)
                      .+++.|..|...|.+...+..|.  +.|... +.+.+. ++...     +.-++.+....    +...+.+...|.|..|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~-~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~C~~C   99 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAI-NQGED-----SVPAKKFKAAP----AEISDGEDRSKCCPVC   99 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHH-TTCCC-----CCSCCCCSCCS----SCCSSCCCTTTEETTT
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcc-cCccc-----CCCCCccCCCc----cccccCCCCCeEcCCC
Confidence            57789999999999999999999  566422 122221 11000     00011111111    1123456678999999


Q ss_pred             cccccCChhhhhhhh
Q psy16925        126 SRTFANGSNCRSHKR  140 (166)
Q Consensus       126 ~~~f~~~~~l~~H~~  140 (166)
                      +..|.....+..|..
T Consensus       100 ~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A          100 NMTFSSPVVAESHYI  114 (127)
T ss_dssp             TEECSSHHHHHHHHT
T ss_pred             CCEeCCHHHHHHHHC
Confidence            999999999999975

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.56  E-value=0.0092  Score=28.07  Aligned_cols=28  Identities=18%  Similarity=0.526  Sum_probs=22.7

Q ss_pred             CcccCcccccccCChhhhhhhhhhcchh
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      .|.||+|.+.|.....|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            3788999888888888888888777643

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.54  E-value=0.23  Score=32.35  Aligned_cols=56  Identities=18%  Similarity=0.268  Sum_probs=30.3

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcCCCCCccCCcCCccccccccccCCCcCCCchhHHHHhhhhcCCCC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSNVSCGWYPDESKDLKNHHNLHTGKRP  119 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~C~~~~~~~~c~~c~~~f~~~~~l~~H~~~h~~~~p  119 (166)
                      .+..|+.|+..+ ....|..|....-+.+.-.|+.|+..+             ....+..|...+.|+.+
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-------------~~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-------------AFEDKEIHDQNCPLALE  164 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-------------EGGGHHHHHTTCCC---
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-------------CHHHHHhHHHhCcChhh
Confidence            345566666555 344566665544444444555554433             34568889888877654

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.27  E-value=0.14  Score=23.37  Aligned_cols=26  Identities=15%  Similarity=0.229  Sum_probs=21.6

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhc
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHL   47 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~   47 (166)
                      +..|..|.+.+++...|..|++..|.
T Consensus         9 kqhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            46799999999999999999886554

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.44  E-value=0.15  Score=28.68  Aligned_cols=28  Identities=36%  Similarity=0.626  Sum_probs=23.0

Q ss_pred             cccCccccccc-------CChhhhhhhhhhcchhH
Q psy16925        120 YTCPWCSRTFA-------NGSNCRSHKRRMHPEEL  147 (166)
Q Consensus       120 ~~C~~C~~~f~-------~~~~l~~H~~~~h~~~~  147 (166)
                      -.|..|++.+.       ..+.|.+|++..|+.+.
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~   63 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREEL   63 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHH
Confidence            47888888887       46789999999998764

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.35  E-value=0.4  Score=22.59  Aligned_cols=26  Identities=15%  Similarity=0.060  Sum_probs=20.6

Q ss_pred             CCCCccchhhhhhhcCChHHHHHHHH
Q psy16925         18 STLGKYSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        18 ~~~~~~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      .+...+.|..|+.+|+....+..|.+
T Consensus         4 ~~~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            4 AEVMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCCCSEETTTTEECSSHHHHHHHHH
T ss_pred             CccCcCeeccccceehhhHHHhhhhe
Confidence            34456788888888888888888876

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.77  E-value=0.15  Score=28.76  Aligned_cols=35  Identities=17%  Similarity=0.316  Sum_probs=22.1

Q ss_pred             chhHHHHhhhhcCCCCcccCcccccccCChhhhhhh
Q psy16925        104 SKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHK  139 (166)
Q Consensus       104 ~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~  139 (166)
                      +..+..|...-.+...|.|-.|++.|.. ...+.|-
T Consensus        22 K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A           22 KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            3456777665555556788888888874 4455553

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=83.97  E-value=0.39  Score=21.35  Aligned_cols=22  Identities=5%  Similarity=0.051  Sum_probs=16.9

Q ss_pred             ccchhhhhhhcCChHHHHHHHH
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      ++.|+.|.....+...+..|.+
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4778888888888888877765

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.19  E-value=0.56  Score=27.01  Aligned_cols=25  Identities=28%  Similarity=0.381  Sum_probs=18.3

Q ss_pred             ccccCCCcCCCchhHHHHhhhhcCCCCc
Q psy16925         93 SNVSCGWYPDESKDLKNHHNLHTGKRPY  120 (166)
Q Consensus        93 ~c~~c~~~f~~~~~l~~H~~~h~~~~p~  120 (166)
                      .|.+||+.|..   |..|+.++++..|.
T Consensus        23 iClecGK~fK~---LkRHL~~~hgltpe   47 (87)
T 2jsp_A           23 VCLECGGSFKS---LKRHLTTHHSMTPE   47 (87)
T ss_dssp             ECTBTCCEESB---HHHHHHHTTCSCHH
T ss_pred             EecccchhhHH---HHHHHHHccCCCHH
Confidence            56677777774   88999997776653

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=81.67  E-value=1  Score=23.26  Aligned_cols=21  Identities=19%  Similarity=0.417  Sum_probs=18.9

Q ss_pred             cccCcccccccCChhhhhhhh
Q psy16925        120 YTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      -.|..|+..|..+-+++.|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            589999999999999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	166
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.003
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (109), Expect = 2e-08
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL 147
           H+G++PY C  C   F      + H  + H E +
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (93), Expect = 4e-06
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEH-LTIHSDD 77
           H GE+P+ C+ C   F   G ++ H L  H+++
Sbjct: 2  THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 2e-07
 Identities = 13/31 (41%), Positives = 22/31 (70%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHS 75
          +H GE+P+ C ECG++F+   IL +H  +H+
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 5e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKR 140
           H+G++PY C  C + F+  S    H+R
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQR 28

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (100), Expect = 4e-07
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 45 VHLGERPFVCHECGQSFASKGILQEHLTIHSD 76
           H GE+P+ C  C ++F  K +L  H   + D
Sbjct: 2  THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 4e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPE 145
           HTG++PY C  C +TF        H +R H  
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 1e-06
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 49 ERPFVCHECGQSFASKGILQEHL-TIHSDDAPWKCDI 84
           +P++C  CG+ F+    L  H+  +H+ + P KC +
Sbjct: 3  GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 5e-04
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 115 TGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE 146
           +  +PY C  C + F+   +   H +++H  E
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (89), Expect = 1e-05
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 46 HLGERPFVCHECGQSFASKGILQEHLTIHSD 76
            G+RPFVC  C  +F +K     HL +H+D
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.0 bits (73), Expect = 0.003
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEEL 147
            +GKRP+ C  C   F   +NC  H  ++H + L
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHL-KVHTDTL 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 3e-05
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 40 AHTKAVHLGERPFVCHECGQSFASKGILQEHLTIHS 75
            ++      R + C ECG+SF+    L +H   H+
Sbjct: 1  GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                  +R Y C  C ++F++ S+   H+R
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 4e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 41 HTKAVHLGERPFVCHECGQSFASKGILQEHLTIH 74
           T+    G +PF C +C +SF+    L  H   H
Sbjct: 2  STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKR 140
                TG +P+ CP C R+F+   +   H++
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (84), Expect = 8e-05
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 49 ERPFVCHECGQSFASKGILQEHLTIHS 75
          ++PF C  C ++F+    L  H+  H+
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 1e-04
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 49 ERPFVCHECGQSFASKGILQEHLTIHSDDAPWKCDICSKKSLKLSN 94
          ++ + C +CG+SF  K     H+++H    P+ C +C KK     +
Sbjct: 1  DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHH 45

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.8 bits (78), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 50 RPFVCHECGQSFASKGILQEHLTIHS 75
          R FVC  C ++FA +  L+ H   H+
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHT 26

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 0.001
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 52 FVCHE--CGQSFASKGILQEHLTIHSDDAPWKCD 83
          F C E  CG+SF  K  L+EH+ +HSD   + C+
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.8 bits (73), Expect = 0.002
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 50 RPFVCHECGQSFASKGILQEHLTIHS 75
          +P+ C ECG++F+    L  H  IH+
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.5 bits (72), Expect = 0.003
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 50 RPFVCHECGQSFASKGILQEHLTIHS 75
          + F C EC + F     L +H+  H 
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQ 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	166
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.55
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.33
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.32
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.29
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.28
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.26
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.25
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.16
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.11
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.09
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.02
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.01
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.0
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.99
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.97
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.97
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.97
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.95
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.93
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.92
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.87
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.81
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.78
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.74
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.74
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.67
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.65
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.62
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.55
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.54
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.52
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.47
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.44
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.43
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.24
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.23
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.05
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.9
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.89
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.86
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.74
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.72
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.71
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.65
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.65
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.57
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.53
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.39
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.29
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.25
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.22
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.22
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.21
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.19
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.15
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.09
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.09
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.07
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.97
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.92
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.9
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.87
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.84
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.8
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.76
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.72
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.72
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.67
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.6
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.56
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.5
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.42
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.39
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.23
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.11
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.04
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.03
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.55
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.34
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.24
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.76
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.74
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.54
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.33
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.07
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.91
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.78
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.23
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.86
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.0
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.0
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	91.94
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.27
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.17
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.73
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.48
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.19
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	89.04
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.85
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.38
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	85.59
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.45
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	84.33
d2ct5a1	60	Zinc finger BED domain-containing protein 1 {Human	81.44
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	80.58

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.7e-16  Score=83.49  Aligned_cols=42  Identities=24%  Similarity=0.470  Sum_probs=32.4

Q ss_pred             cCCCchhHHHHhhhhcCCCCcccCcccccccCChhhhhhhhh
Q psy16925        100 YPDESKDLKNHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       100 ~f~~~~~l~~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      .|.....|..|+++|++++||.|++||++|...+.|..|++.
T Consensus        11 ~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1          11 SFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             EESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             eECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            346677777787788888888888888888888888888765

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.5e-15  Score=79.66  Aligned_cols=51  Identities=35%  Similarity=0.646  Sum_probs=28.4

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchhhcCChHHHHHHHhHc
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      +|.|+ |+++|.....|..|++ +|++++||.|..|++.|.....|..|+++|
T Consensus         3 ~y~C~-Cgk~F~~~~~l~~H~~-~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           3 LYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CEECT-TSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCCC-CCCeECCHHHhHHHhh-ccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            45553 5555555555555544 455555555555555555555555555443

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.1e-13  Score=67.49  Aligned_cols=37  Identities=27%  Similarity=0.605  Sum_probs=33.4

Q ss_pred             HHhhhhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        109 NHHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       109 ~H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +|+++|++++||.|++||++|...++|..|++. |+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~-HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCcc-CCCC
Confidence            478899999999999999999999999999885 7775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.7e-13  Score=65.75  Aligned_cols=35  Identities=29%  Similarity=0.684  Sum_probs=32.1

Q ss_pred             hhhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        112 NLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       112 ~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      |+|+||+||.|+.|+++|+..++|..|++.+|.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            57999999999999999999999999998888764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=3.8e-13  Score=64.62  Aligned_cols=33  Identities=36%  Similarity=0.783  Sum_probs=30.2

Q ss_pred             hhhcCCCCcccCcccccccCChhhhhhhhhhcc
Q psy16925        112 NLHTGKRPYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       112 ~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      |+|++++||+|.+|+++|...+.|..|++.|+.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            579999999999999999999999999998654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=4.1e-13  Score=64.95  Aligned_cols=33  Identities=30%  Similarity=0.715  Sum_probs=30.8

Q ss_pred             HhhhhcCCCCcccCcccccccCChhhhhhhhhh
Q psy16925        110 HHNLHTGKRPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       110 H~~~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      |.|+|++|+||+|++|+++|...++|..|++.|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            678999999999999999999999999999864

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=7.3e-13  Score=61.98  Aligned_cols=33  Identities=36%  Similarity=0.805  Sum_probs=29.3

Q ss_pred             hhcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        113 LHTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       113 ~h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +|++++||+|.+||++|...+.|..|++. |+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~-HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHG-GGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccc-cCCC
Confidence            48899999999999999999999999886 7764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.2e-13  Score=67.28  Aligned_cols=36  Identities=22%  Similarity=0.515  Sum_probs=23.8

Q ss_pred             CCCcccCcccccccCChhhhhhhhhhcchhHHHHHH
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRMHPEELKLYES  152 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  152 (166)
                      ++||+|.+||++|...++|..|++.+|++++||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            566666666666666666666666556666666553

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=5.1e-12  Score=61.35  Aligned_cols=36  Identities=31%  Similarity=0.934  Sum_probs=26.3

Q ss_pred             CCCCeecccchhhcCChHHHHHHHh-HcCCCCCccCC
Q psy16925         48 GERPFVCHECGQSFASKGILQEHLT-IHSDDAPWKCD   83 (166)
Q Consensus        48 ~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~   83 (166)
                      .++||+|..||+.|...++|..|++ +|++++||.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4677777777777777777777754 57777777775

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=8.8e-12  Score=58.21  Aligned_cols=33  Identities=39%  Similarity=0.982  Sum_probs=28.8

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +|++++||.|..|++.|...+.|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478899999999999999999999999988875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=9e-12  Score=58.96  Aligned_cols=32  Identities=34%  Similarity=0.864  Sum_probs=28.4

Q ss_pred             hcCCCCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        114 HTGKRPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       114 h~~~~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      |+|++||+|++|++.|.+.++|..|++. |+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~-Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc-cCCc
Confidence            6899999999999999999999999986 6653

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1e-11  Score=60.34  Aligned_cols=33  Identities=30%  Similarity=0.656  Sum_probs=26.5

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +|++++||.|..||+.|...+.|..|+++|+||
T Consensus         6 ~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           6 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            677888888888888888888888888888764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=2.3e-11  Score=54.50  Aligned_cols=28  Identities=29%  Similarity=0.774  Sum_probs=24.5

Q ss_pred             CCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      |+||+|++|+++|...+.|..|++. |+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~-HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRT-HTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH-HHC
T ss_pred             CcCccCCCCcCEecccccccccCCC-ccC
Confidence            6899999999999999999999886 554

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.2e-10  Score=55.61  Aligned_cols=33  Identities=33%  Similarity=0.793  Sum_probs=29.6

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +|++++||+|.+|++.|...+.|..|+++|..+
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            689999999999999999999999999998764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=1.2e-10  Score=54.97  Aligned_cols=32  Identities=41%  Similarity=0.834  Sum_probs=28.4

Q ss_pred             hcCCCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         46 HLGERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        46 h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      |++++||.|.+|++.|.+..+|..|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67899999999999999999999999998754

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=5.8e-11  Score=57.16  Aligned_cols=32  Identities=31%  Similarity=0.546  Sum_probs=27.7

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHcCC
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      .|++++||+|..|++.|.....|..|++.|..
T Consensus         5 ~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             ccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            68899999999999999999999999888853

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=9.7e-11  Score=52.41  Aligned_cols=28  Identities=29%  Similarity=0.746  Sum_probs=23.5

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcCC
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      |+||+|+.|++.|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888865

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=8.8e-11  Score=53.09  Aligned_cols=28  Identities=21%  Similarity=0.695  Sum_probs=23.7

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +||.|++|+++|.+.+.|..|++. |+||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~-Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKT-HQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHG-GGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCc-cCCc
Confidence            588899999999999999999886 7765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.97  E-value=7.1e-11  Score=53.49  Aligned_cols=28  Identities=36%  Similarity=0.797  Sum_probs=23.3

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +||.|++|+++|...+.|..|++. |+||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~-HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRS-HTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT-TTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCc-ccCC
Confidence            588888888888888888888885 7765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.95  E-value=1.9e-10  Score=52.01  Aligned_cols=29  Identities=34%  Similarity=0.783  Sum_probs=21.1

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcCCCC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHSDDA   78 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   78 (166)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.1e-10  Score=50.94  Aligned_cols=25  Identities=32%  Similarity=0.741  Sum_probs=23.0

Q ss_pred             CCcccCcccccccCChhhhhhhhhh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      +||+|.+||++|...+.|..|++.|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            6999999999999999999999863

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.9e-10  Score=51.36  Aligned_cols=29  Identities=28%  Similarity=0.698  Sum_probs=19.1

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcCCCC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHSDDA   78 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   78 (166)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46666666666666666666666666653

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.87  E-value=7.4e-11  Score=59.76  Aligned_cols=39  Identities=26%  Similarity=0.577  Sum_probs=33.0

Q ss_pred             hHHHHhhhhcCCCCcccCc--ccccccCChhhhhhhhhhcchh
Q psy16925        106 DLKNHHNLHTGKRPYTCPW--CSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       106 ~l~~H~~~h~~~~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      .+..|+. |++++||.|+.  |+++|...+.|..|++. |+||
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~-Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHH-HTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhccc-ccCC
Confidence            3555664 99999999977  99999999999999886 7776

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=9.3e-10  Score=52.38  Aligned_cols=30  Identities=30%  Similarity=0.737  Sum_probs=26.1

Q ss_pred             hhcCCCCeecccchhhcCChHHHHHHHhHc
Q psy16925         45 VHLGERPFVCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        45 ~h~~~~~~~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      +|++|+||.|++|++.|....+|..|++.+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            588999999999999999999999997553

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1e-09  Score=52.12  Aligned_cols=27  Identities=41%  Similarity=0.721  Sum_probs=12.8

Q ss_pred             CCCcCCCchhHHHHhhhhcCCCCcccC
Q psy16925         97 CGWYPDESKDLKNHHNLHTGKRPYTCP  123 (166)
Q Consensus        97 c~~~f~~~~~l~~H~~~h~~~~p~~C~  123 (166)
                      |++.|...+.|..|+++|++++||.|+
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            444444444444444444444444443

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=9.8e-10  Score=47.87  Aligned_cols=26  Identities=38%  Similarity=0.913  Sum_probs=20.6

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~   75 (166)
                      +||+|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888887763

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.3e-09  Score=50.90  Aligned_cols=32  Identities=47%  Similarity=0.980  Sum_probs=27.9

Q ss_pred             eeccc--chhhcCChHHHHHHHhHcCCCCCccCC
Q psy16925         52 FVCHE--CGQSFASKGILQEHLTIHSDDAPWKCD   83 (166)
Q Consensus        52 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~   83 (166)
                      |.|+.  |++.|.....|.+|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67888  888888888888888888888888886

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.6e-09  Score=49.10  Aligned_cols=28  Identities=29%  Similarity=0.774  Sum_probs=21.7

Q ss_pred             CCcccCc--ccccccCChhhhhhhhhhcchh
Q psy16925        118 RPYTCPW--CSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       118 ~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +||.|+.  |+++|...+.|..|++. |+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRS-HTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHH-TTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCc-CcCC
Confidence            5788877  88888888888888775 6664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.3e-09  Score=47.11  Aligned_cols=28  Identities=29%  Similarity=0.643  Sum_probs=18.9

Q ss_pred             CCeeccc--chhhcCChHHHHHHHhHcCCC
Q psy16925         50 RPFVCHE--CGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        50 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +||.|++  |++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4666766  777777777777777776654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=2.1e-09  Score=48.80  Aligned_cols=28  Identities=32%  Similarity=0.839  Sum_probs=21.4

Q ss_pred             CCcccCc--ccccccCChhhhhhhhhhcchh
Q psy16925        118 RPYTCPW--CSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       118 ~p~~C~~--C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +||.|+.  |+++|...+.|..|++. |+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRI-HTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHH-HHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccc-cCCC
Confidence            5788866  88888888888888775 6664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=4.3e-09  Score=53.08  Aligned_cols=39  Identities=18%  Similarity=0.478  Sum_probs=28.4

Q ss_pred             HHHHHHHhhcCCCCeeccc--chhhcCChHHHHHHHhHcCCCC
Q psy16925         38 VTAHTKAVHLGERPFVCHE--CGQSFASKGILQEHLTIHSDDA   78 (166)
Q Consensus        38 l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~   78 (166)
                      +..|+  .|++++||.|.+  |++.|...++|..|+++|++++
T Consensus         7 l~~h~--~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC--EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh--hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34444  377788888866  8888888888888888887764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=7.2e-09  Score=46.98  Aligned_cols=28  Identities=39%  Similarity=0.836  Sum_probs=18.7

Q ss_pred             CCeeccc--chhhcCChHHHHHHHhHcCCC
Q psy16925         50 RPFVCHE--CGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        50 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      +||.|++  |++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4666765  777777777777777666654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.9e-08  Score=45.95  Aligned_cols=27  Identities=37%  Similarity=0.838  Sum_probs=14.9

Q ss_pred             Ceeccc--chhhcCChHHHHHHHhHcCCC
Q psy16925         51 PFVCHE--CGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        51 ~~~C~~--C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ||.|++  |++.|...++|..|+++|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            455532  555555555555555555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.54  E-value=2.4e-08  Score=45.86  Aligned_cols=26  Identities=31%  Similarity=0.814  Sum_probs=23.5

Q ss_pred             CCCcccCc--ccccccCChhhhhhhhhh
Q psy16925        117 KRPYTCPW--CSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       117 ~~p~~C~~--C~~~f~~~~~l~~H~~~~  142 (166)
                      |+||.|+.  |+++|...+.|.+|++.|
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            68999987  999999999999999874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=1.2e-08  Score=46.61  Aligned_cols=28  Identities=36%  Similarity=0.940  Sum_probs=19.4

Q ss_pred             CCcccC--cccccccCChhhhhhhhhhcchh
Q psy16925        118 RPYTCP--WCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       118 ~p~~C~--~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +||.|+  .|+++|...++|..|++. |+||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~-Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRT-HTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCc-cccc
Confidence            467774  477777777777777765 6654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=3e-08  Score=43.93  Aligned_cols=25  Identities=44%  Similarity=1.031  Sum_probs=21.7

Q ss_pred             CCcccCc--ccccccCChhhhhhhhhh
Q psy16925        118 RPYTCPW--CSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       118 ~p~~C~~--C~~~f~~~~~l~~H~~~~  142 (166)
                      +||.|+.  |+++|...++|..|++.|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            5899977  999999999999998863

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.44  E-value=1.9e-08  Score=45.08  Aligned_cols=27  Identities=41%  Similarity=0.930  Sum_probs=20.0

Q ss_pred             CCcccCc--ccccccCChhhhhhhhhhcch
Q psy16925        118 RPYTCPW--CSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       118 ~p~~C~~--C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      +||.|++  |+++|+..+.|..|++. |+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~-HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI-HTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH-HHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc-cCC
Confidence            5778866  88888888888888774 543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.43  E-value=7.5e-08  Score=44.13  Aligned_cols=28  Identities=29%  Similarity=0.735  Sum_probs=20.3

Q ss_pred             CCCeeccc--chhhcCChHHHHHHHhHcCC
Q psy16925         49 ERPFVCHE--CGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        49 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~   76 (166)
                      |+||.|++  |++.|....+|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777776  77777777777777777764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=5.4e-08  Score=43.54  Aligned_cols=27  Identities=33%  Similarity=0.842  Sum_probs=16.0

Q ss_pred             CCeeccc--chhhcCChHHHHHHHhHcCC
Q psy16925         50 RPFVCHE--CGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        50 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~   76 (166)
                      +||.|++  |++.|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3566655  66666666666666665543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=1.4e-07  Score=41.68  Aligned_cols=24  Identities=38%  Similarity=0.840  Sum_probs=13.1

Q ss_pred             Ceeccc--chhhcCChHHHHHHHhHc
Q psy16925         51 PFVCHE--CGQSFASKGILQEHLTIH   74 (166)
Q Consensus        51 ~~~C~~--C~~~f~~~~~l~~h~~~h   74 (166)
                      ||.|++  |++.|...++|.+|++.|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            455554  555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.23  E-value=2.2e-07  Score=39.71  Aligned_cols=26  Identities=27%  Similarity=0.767  Sum_probs=23.1

Q ss_pred             CCCcccCcccccccCChhhhhhhhhh
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      |+||.|..||+.|+.+....+|.+.|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            68999999999999999999998764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=8.2e-07  Score=36.65  Aligned_cols=25  Identities=28%  Similarity=0.700  Sum_probs=18.8

Q ss_pred             CcccCcccccccCChhhhhhhhhhcc
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      |++|+.|++.|+.+..|..|++. |+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~-ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRC-HT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG-CC
T ss_pred             CCccchhhhHhcchhHHHHHhhc-cC
Confidence            56788888888888888888775 44

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.6e-06  Score=36.64  Aligned_cols=29  Identities=38%  Similarity=0.678  Sum_probs=19.5

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcCCC
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ++||+|+.|.....+.+.|..|.+.|+++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            45677777777777777777777666653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=8.1e-07  Score=37.61  Aligned_cols=28  Identities=32%  Similarity=0.638  Sum_probs=22.6

Q ss_pred             CCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      ++||+|..|.+.-...++|..|++. |+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~-htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRS-HTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTT-CCS
T ss_pred             CCcceeeecccccCCchheEEeeec-ccC
Confidence            5788888888888888888888886 655

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.6e-06  Score=35.78  Aligned_cols=23  Identities=35%  Similarity=0.833  Sum_probs=10.7

Q ss_pred             ecccchhhcCChHHHHHHHhHcC
Q psy16925         53 VCHECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        53 ~C~~C~~~f~~~~~l~~h~~~h~   75 (166)
                      +|..|++-|+.+..|..|++.|+
T Consensus         3 kc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             ccchhhhHhcchhHHHHHhhccC
Confidence            44444444444444444444443

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.4e-06  Score=37.85  Aligned_cols=29  Identities=21%  Similarity=0.364  Sum_probs=13.9

Q ss_pred             cchhhhhhhcCChHHHHHHHHHhhcCCCCe
Q psy16925         23 YSLALMVTRFSSRSAVTAHTKAVHLGERPF   52 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~   52 (166)
                      ..|++|++.|.+...|.+|.. .|++|+||
T Consensus         6 ~~ce~cgk~frdvyhlnrhkl-shs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKL-SHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGG-GSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhc-ccCCCCCC
Confidence            344555555555555555533 44444444

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.6e-06  Score=38.39  Aligned_cols=33  Identities=27%  Similarity=0.580  Sum_probs=29.6

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcCCCCCcc
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHSDDAPWK   81 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~   81 (166)
                      .+...|..||+.|.+...|.+|...|++++||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            345689999999999999999999999999973

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=4.7e-06  Score=35.49  Aligned_cols=27  Identities=41%  Similarity=0.851  Sum_probs=20.7

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcC
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~   75 (166)
                      |+||.|.+||+.|....+..+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            567888888888888877777777663

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=4.2e-06  Score=36.18  Aligned_cols=28  Identities=32%  Similarity=0.748  Sum_probs=20.5

Q ss_pred             CCCeecccchhhcCChHHHHHHHhHcCC
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      ++||.|++|...|..+..+.-|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4677777777777777777777777654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=2.5e-06  Score=36.87  Aligned_cols=26  Identities=31%  Similarity=0.742  Sum_probs=23.2

Q ss_pred             CCCcccCcccccccCChhhhhhhhhh
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      ++||+|++|+..|..+.....|.+.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrsh   26 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSH   26 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeecc
Confidence            58999999999999999998998864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.74  E-value=4.4e-06  Score=36.43  Aligned_cols=28  Identities=29%  Similarity=0.732  Sum_probs=25.5

Q ss_pred             CcccCcccccccCChhhhhhhhhhcchh
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      ||.|.+|++.|+...-|.+|++..|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            7999999999999999999999888763

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=5.7e-06  Score=34.75  Aligned_cols=26  Identities=27%  Similarity=0.579  Sum_probs=18.0

Q ss_pred             cccCcccccccCChhhhhhhhhhcchh
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +.|.+||++|...+.|.+|+.. |+||
T Consensus         3 hvc~ecgkaf~essklkrh~lv-htge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLV-HTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGG-TSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhc-ccCC
Confidence            4677777777777777777663 5553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=9.4e-06  Score=33.05  Aligned_cols=23  Identities=35%  Similarity=0.736  Sum_probs=19.8

Q ss_pred             cccCcccccccCChhhhhhhhhh
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            67889999999999999998863

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.9e-05  Score=33.50  Aligned_cols=26  Identities=31%  Similarity=0.813  Sum_probs=14.0

Q ss_pred             eecccchhhcCChHHHHHHHhHcCCC
Q psy16925         52 FVCHECGQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~h~~~h~~~   77 (166)
                      |.|+.|+......+-|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            44555555555555555555555543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.6e-05  Score=33.38  Aligned_cols=24  Identities=38%  Similarity=0.886  Sum_probs=12.6

Q ss_pred             ecccchhhcCChHHHHHHHhHcCC
Q psy16925         53 VCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        53 ~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      .|..||+.|...+.|.+|+..|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455555555555555555555544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=2.2e-05  Score=33.46  Aligned_cols=29  Identities=31%  Similarity=0.706  Sum_probs=24.1

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcchh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHPEE  146 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~~~  146 (166)
                      +||+|..|...-+..++|..|....|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            58899999988889999999988777543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=1.5e-05  Score=34.43  Aligned_cols=26  Identities=31%  Similarity=0.908  Sum_probs=21.1

Q ss_pred             CCcccCc--ccccccCChhhhhhhhhhc
Q psy16925        118 RPYTCPW--CSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus       118 ~p~~C~~--C~~~f~~~~~l~~H~~~~h  143 (166)
                      +||.|..  |++++...++|+.|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5788855  8889999999999988765

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=2.8e-05  Score=36.30  Aligned_cols=26  Identities=31%  Similarity=0.714  Sum_probs=23.0

Q ss_pred             cCCCCcccCcccccccCChhhhhhhh
Q psy16925        115 TGKRPYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       115 ~~~~p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      +|-+||+|..|++.|-+..++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46799999999999999999988854

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=4.3e-05  Score=31.92  Aligned_cols=25  Identities=32%  Similarity=0.614  Sum_probs=22.5

Q ss_pred             CCcccCcccccccCChhhhhhhhhh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      +||+|..|.+.-...++|..|++.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            6899999999999999999998863

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=5.8e-05  Score=32.81  Aligned_cols=27  Identities=41%  Similarity=0.951  Sum_probs=18.6

Q ss_pred             CCcccCc--ccccccCChhhhhhhhhhcc
Q psy16925        118 RPYTCPW--CSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       118 ~p~~C~~--C~~~f~~~~~l~~H~~~~h~  144 (166)
                      +||.|+.  |.+.|+..++...|+...|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4677755  88888888887777633344

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=9.6e-05  Score=31.26  Aligned_cols=28  Identities=25%  Similarity=0.246  Sum_probs=25.0

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhhcCCC
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVHLGER   50 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~   50 (166)
                      +|.|++|+.+....+.|..|++ .|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIR-sHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIR-THTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHH-HhcCCC
Confidence            4889999999999999999998 788763

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.00016  Score=29.79  Aligned_cols=22  Identities=32%  Similarity=0.309  Sum_probs=10.3

Q ss_pred             cCCCcCCCchhHHHHhhhhcCC
Q psy16925         96 SCGWYPDESKDLKNHHNLHTGK  117 (166)
Q Consensus        96 ~c~~~f~~~~~l~~H~~~h~~~  117 (166)
                      .|.+.|.++..|..|-+.|+|+
T Consensus         5 ~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           5 TCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             TTCCCCSSHHHHHHHHHHHSSC
T ss_pred             chHHHHHHhHhhhhccccccCC
Confidence            3444444444455555544444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=7.5e-05  Score=31.76  Aligned_cols=22  Identities=23%  Similarity=0.511  Sum_probs=11.6

Q ss_pred             CeecccchhhcCChHHHHHHHh
Q psy16925         51 PFVCHECGQSFASKGILQEHLT   72 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~   72 (166)
                      ||.|+.|.....+.++|..|+.
T Consensus         2 py~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhh
Confidence            4555555555555555555544

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00015  Score=30.26  Aligned_cols=26  Identities=38%  Similarity=0.819  Sum_probs=20.4

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~   75 (166)
                      +||+|..|...-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57888888888888888888887774

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.19  E-value=9.8e-05  Score=29.93  Aligned_cols=23  Identities=35%  Similarity=0.769  Sum_probs=15.4

Q ss_pred             eecccchhhcCChHHHHHHHhHc
Q psy16925         52 FVCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        52 ~~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666777777777777766655

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.15  E-value=0.00016  Score=29.80  Aligned_cols=26  Identities=31%  Similarity=0.524  Sum_probs=20.0

Q ss_pred             ecccchhhcCChHHHHHHHhHcCCCC
Q psy16925         53 VCHECGQSFASKGILQEHLTIHSDDA   78 (166)
Q Consensus        53 ~C~~C~~~f~~~~~l~~h~~~h~~~~   78 (166)
                      .|+.|.+.|.++.-|..|-+.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            47778888888888888877777763

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.09  E-value=0.00024  Score=32.84  Aligned_cols=27  Identities=30%  Similarity=0.694  Sum_probs=15.2

Q ss_pred             CCeecccchhhcCChHHHHHHHhHcCC
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      +.|.|..|++.|.+...|.-|++.|..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcc
Confidence            345566666666655555555555543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.09  E-value=9.6e-05  Score=29.96  Aligned_cols=25  Identities=36%  Similarity=0.845  Sum_probs=21.5

Q ss_pred             CcccCcccccccCChhhhhhhhhhc
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      ||+|+.|...|-.+.+|+.|+...|
T Consensus         2 pykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999986543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.07  E-value=0.00011  Score=31.03  Aligned_cols=24  Identities=33%  Similarity=0.844  Sum_probs=18.4

Q ss_pred             CCcccCc--ccccccCChhhhhhhhh
Q psy16925        118 RPYTCPW--CSRTFANGSNCRSHKRR  141 (166)
Q Consensus       118 ~p~~C~~--C~~~f~~~~~l~~H~~~  141 (166)
                      .||+|+.  |++.|+..+.|.+|...
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhc
Confidence            4777754  88888888888888764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00011  Score=31.14  Aligned_cols=27  Identities=33%  Similarity=0.736  Sum_probs=22.5

Q ss_pred             CCcccCcccccccCChhhhhhhhhhcc
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      +||+|..|.....+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999998888889999999876553

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00034  Score=29.53  Aligned_cols=23  Identities=39%  Similarity=0.842  Sum_probs=16.7

Q ss_pred             CeecccchhhcCChHHHHHHHhH
Q psy16925         51 PFVCHECGQSFASKGILQEHLTI   73 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~   73 (166)
                      ||.|..|...|.++.+|..|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56777777777777777777654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.90  E-value=0.00052  Score=28.90  Aligned_cols=26  Identities=27%  Similarity=0.620  Sum_probs=14.6

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      -|.|..|...|...-+|..|+-.|++
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            45555555555555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00025  Score=30.77  Aligned_cols=22  Identities=18%  Similarity=0.312  Sum_probs=13.9

Q ss_pred             ccCCCcCCCchhHHHHh-hhhcC
Q psy16925         95 VSCGWYPDESKDLKNHH-NLHTG  116 (166)
Q Consensus        95 ~~c~~~f~~~~~l~~H~-~~h~~  116 (166)
                      +.|++.|.+.++...|+ |+|..
T Consensus         8 ~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           8 EGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             TTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CChhhhhcchhhhhhhccccccC
Confidence            34666667777777775 56643

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.84  E-value=0.00023  Score=32.88  Aligned_cols=25  Identities=32%  Similarity=0.724  Sum_probs=18.2

Q ss_pred             CCcccCcccccccCChhhhhhhhhh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      +.|+|..|++.|.....|--|++.|
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTT
T ss_pred             CccCCCCCCCccCCcccccchHhhh
Confidence            4577777777777777777777654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.80  E-value=0.00038  Score=28.15  Aligned_cols=23  Identities=39%  Similarity=0.804  Sum_probs=20.2

Q ss_pred             CCeecccchhhcCChHHHHHHHh
Q psy16925         50 RPFVCHECGQSFASKGILQEHLT   72 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~   72 (166)
                      .||+|..|...|.++..|+.|+.
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            37999999999999999999864

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00022  Score=30.15  Aligned_cols=23  Identities=30%  Similarity=0.829  Sum_probs=20.8

Q ss_pred             CcccCcccccccCChhhhhhhhh
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~  141 (166)
                      ||.|..|..+|..+.+|..|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68999999999999999999874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00072  Score=28.98  Aligned_cols=16  Identities=19%  Similarity=0.636  Sum_probs=7.0

Q ss_pred             chhhcCChHHHHHHHh
Q psy16925         57 CGQSFASKGILQEHLT   72 (166)
Q Consensus        57 C~~~f~~~~~l~~h~~   72 (166)
                      |++++...++|..|++
T Consensus        10 C~K~YtdPSSLRKH~k   25 (29)
T d2glia5          10 CTKRYTDPSSLRKHVK   25 (29)
T ss_dssp             TCCEESSHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHH
Confidence            4444444444444443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.72  E-value=0.00063  Score=28.59  Aligned_cols=24  Identities=29%  Similarity=0.780  Sum_probs=13.9

Q ss_pred             Ceeccc--chhhcCChHHHHHHHhHc
Q psy16925         51 PFVCHE--CGQSFASKGILQEHLTIH   74 (166)
Q Consensus        51 ~~~C~~--C~~~f~~~~~l~~h~~~h   74 (166)
                      ||+|+.  |++.|...+.|.+|...|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            556655  666666666666665443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00036  Score=31.99  Aligned_cols=26  Identities=31%  Similarity=0.829  Sum_probs=17.8

Q ss_pred             CCCCccc--CcccccccCChhhhhhhhh
Q psy16925        116 GKRPYTC--PWCSRTFANGSNCRSHKRR  141 (166)
Q Consensus       116 ~~~p~~C--~~C~~~f~~~~~l~~H~~~  141 (166)
                      .++||.|  +-|+.+|.+...|..|...
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~K   30 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhh
Confidence            3677777  5577777777777777654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.60  E-value=0.0005  Score=28.48  Aligned_cols=22  Identities=27%  Similarity=0.779  Sum_probs=19.0

Q ss_pred             CcccCcccccccCChhhhhhhh
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      ||+|+.||+-+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999888864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.56  E-value=0.00041  Score=29.23  Aligned_cols=28  Identities=29%  Similarity=0.553  Sum_probs=20.5

Q ss_pred             CCCcccCcccccccCChhhhhhhhhhcch
Q psy16925        117 KRPYTCPWCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       117 ~~p~~C~~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      ++.|.|..|...|...-.|+.|+.. |+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvs-htg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVS-HTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHH-HSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeec-ccC
Confidence            4457788888888888888888764 554

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00046  Score=28.70  Aligned_cols=25  Identities=32%  Similarity=0.735  Sum_probs=21.8

Q ss_pred             cccCcccccccCChhhhhhhhhhcc
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      |.||.|+-..+.+++|..|++..|+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            7899999999999999999987663

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00066  Score=28.30  Aligned_cols=24  Identities=29%  Similarity=0.508  Sum_probs=20.1

Q ss_pred             CcccCcccccccCChhhhhhhhhh
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRRM  142 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~~  142 (166)
                      |-+|++|.++-+.+..|+.|.+.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            567899999999999999998864

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0012  Score=30.17  Aligned_cols=26  Identities=38%  Similarity=0.905  Sum_probs=18.3

Q ss_pred             CCCeeccc--chhhcCChHHHHHHHhHc
Q psy16925         49 ERPFVCHE--CGQSFASKGILQEHLTIH   74 (166)
Q Consensus        49 ~~~~~C~~--C~~~f~~~~~l~~h~~~h   74 (166)
                      ++||.|..  |+.+|.++..|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            67777744  777777777777776655

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.23  E-value=0.0012  Score=27.85  Aligned_cols=26  Identities=38%  Similarity=0.759  Sum_probs=13.1

Q ss_pred             Ceeccc--chhhcCChHHHHHHHhHcCC
Q psy16925         51 PFVCHE--CGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        51 ~~~C~~--C~~~f~~~~~l~~h~~~h~~   76 (166)
                      ||.|..  |.+.|.+...|.+|...|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            444443  55555555555555554443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.0017  Score=27.39  Aligned_cols=24  Identities=29%  Similarity=0.614  Sum_probs=16.1

Q ss_pred             CCeecccchhhcCChHHHHHHHhH
Q psy16925         50 RPFVCHECGQSFASKGILQEHLTI   73 (166)
Q Consensus        50 ~~~~C~~C~~~f~~~~~l~~h~~~   73 (166)
                      +||+|..|.....+.++|..|+..
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            366777777777777777777543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0025  Score=29.52  Aligned_cols=24  Identities=25%  Similarity=0.779  Sum_probs=18.4

Q ss_pred             CCCCeecccchhhcCChHHHHHHH
Q psy16925         48 GERPFVCHECGQSFASKGILQEHL   71 (166)
Q Consensus        48 ~~~~~~C~~C~~~f~~~~~l~~h~   71 (166)
                      +-+||.|..|++.|.-..++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            567888888888888877777774

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.03  E-value=0.001  Score=28.79  Aligned_cols=21  Identities=29%  Similarity=0.841  Sum_probs=12.6

Q ss_pred             CeecccchhhcCChHHHHHHH
Q psy16925         51 PFVCHECGQSFASKGILQEHL   71 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~   71 (166)
                      ||.|.+|++.|....-|.+|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHHH
Confidence            455666666666666666664

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.0024  Score=30.72  Aligned_cols=26  Identities=19%  Similarity=0.511  Sum_probs=21.5

Q ss_pred             CcccCcccccccCChhhhhhhhhhcc
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      -|.|..|++.|.....|+.|...|..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            47899999999999999999876543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0054  Score=27.33  Aligned_cols=20  Identities=25%  Similarity=0.034  Sum_probs=13.8

Q ss_pred             CCcCCCchhHHHHhhhhcCC
Q psy16925         98 GWYPDESKDLKNHHNLHTGK  117 (166)
Q Consensus        98 ~~~f~~~~~l~~H~~~h~~~  117 (166)
                      ++.|.+...|..|+|.|++|
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45567777777777777764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.24  E-value=0.004  Score=26.18  Aligned_cols=27  Identities=22%  Similarity=0.592  Sum_probs=15.5

Q ss_pred             CCcccC--cccccccCChhhhhhhhhhcch
Q psy16925        118 RPYTCP--WCSRTFANGSNCRSHKRRMHPE  145 (166)
Q Consensus       118 ~p~~C~--~C~~~f~~~~~l~~H~~~~h~~  145 (166)
                      +||.|.  -|.+.|...-.|.+|... |+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~t-htg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLT-HTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHH-HHT
T ss_pred             CCcCcccccccccchhhhhhhhhhcc-ccC
Confidence            355553  366777766666666543 443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.76  E-value=0.0052  Score=24.76  Aligned_cols=24  Identities=33%  Similarity=0.917  Sum_probs=18.1

Q ss_pred             cccCcccccccCChhhhhhhhhhc
Q psy16925        120 YTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus       120 ~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      |.|+.|-+.|..+.+...|....|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            568888888888888777776555

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.74  E-value=0.0084  Score=24.66  Aligned_cols=21  Identities=43%  Similarity=0.879  Sum_probs=14.4

Q ss_pred             CeecccchhhcCChHHHHHHH
Q psy16925         51 PFVCHECGQSFASKGILQEHL   71 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~   71 (166)
                      ||.|..||+.+..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            466777777777777776664

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.0068  Score=25.05  Aligned_cols=25  Identities=20%  Similarity=0.275  Sum_probs=14.9

Q ss_pred             ccchhhhhhhcCChHHHHHHHHHhh
Q psy16925         22 KYSLALMVTRFSSRSAVTAHTKAVH   46 (166)
Q Consensus        22 ~~~C~~C~~~~~~~~~l~~H~~~~h   46 (166)
                      +|.|+.|.-....+++|..|++..|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3556666666666666666665433

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.33  E-value=0.024  Score=23.40  Aligned_cols=22  Identities=45%  Similarity=0.709  Sum_probs=11.3

Q ss_pred             ecccchhhcCChHHHHHHHhHc
Q psy16925         53 VCHECGQSFASKGILQEHLTIH   74 (166)
Q Consensus        53 ~C~~C~~~f~~~~~l~~h~~~h   74 (166)
                      +|+.|..+.+++..|..|.++|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4555555555555555554444

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.07  E-value=0.011  Score=23.72  Aligned_cols=21  Identities=29%  Similarity=0.566  Sum_probs=10.3

Q ss_pred             cchhhhhhhcCChHHHHHHHH
Q psy16925         23 YSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      |.|+.|-+.|..+..+..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            344555555555555555444

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.91  E-value=0.0099  Score=26.44  Aligned_cols=20  Identities=20%  Similarity=0.373  Sum_probs=15.4

Q ss_pred             hhhcCChHHHHHHHhHcCCC
Q psy16925         58 GQSFASKGILQEHLTIHSDD   77 (166)
Q Consensus        58 ~~~f~~~~~l~~h~~~h~~~   77 (166)
                      ++.|.....|..|++.|+++
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45688888888888888764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.0066  Score=31.46  Aligned_cols=43  Identities=14%  Similarity=0.249  Sum_probs=24.5

Q ss_pred             CcccCCCCCccchhhhhhhcCChHHHHHHHHHhhcCCCCeecccchh
Q psy16925         13 GFRNASTLGKYSLALMVTRFSSRSAVTAHTKAVHLGERPFVCHECGQ   59 (166)
Q Consensus        13 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~   59 (166)
                      ..+|++....|.|+.|+++|+....+..    .-.....|.|..|+.
T Consensus         5 ~~rd~~~~~~y~Cp~C~~~ys~Lda~~L----~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_           5 DERDSTNRASFKCPVCSSTFTDLEANQL----FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHHH----EETTTTEEBCSSSCC
T ss_pred             hhhccccCCceECCCCCCCcchhhHHHh----cCcCCCeEEecCCCC
Confidence            3456666666777777777666665532    122344566666654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.23  E-value=0.024  Score=27.13  Aligned_cols=25  Identities=28%  Similarity=0.596  Sum_probs=18.8

Q ss_pred             CeecccchhhcCChHHHHHHHhHcC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHS   75 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~   75 (166)
                      .|.|..|++.|.....|..|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4678888888888888888766663

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.86  E-value=0.047  Score=23.93  Aligned_cols=26  Identities=27%  Similarity=0.758  Sum_probs=18.7

Q ss_pred             CeecccchhhcCChHHHHHHHhHcCC
Q psy16925         51 PFVCHECGQSFASKGILQEHLTIHSD   76 (166)
Q Consensus        51 ~~~C~~C~~~f~~~~~l~~h~~~h~~   76 (166)
                      .|.|..|+++|.....+.+|...-++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888777777655443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.00  E-value=0.035  Score=23.20  Aligned_cols=25  Identities=16%  Similarity=0.142  Sum_probs=17.1

Q ss_pred             cchhhhhhhcCChHHHHHHHHHhhc
Q psy16925         23 YSLALMVTRFSSRSAVTAHTKAVHL   47 (166)
Q Consensus        23 ~~C~~C~~~~~~~~~l~~H~~~~h~   47 (166)
                      |.|..|++...+...+..|+...|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            5677777777777777777665554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.00  E-value=0.035  Score=26.42  Aligned_cols=28  Identities=32%  Similarity=0.617  Sum_probs=23.7

Q ss_pred             CCCCcccCcccccccCChhhhhhhhhhc
Q psy16925        116 GKRPYTCPWCSRTFANGSNCRSHKRRMH  143 (166)
Q Consensus       116 ~~~p~~C~~C~~~f~~~~~l~~H~~~~h  143 (166)
                      .+.|-.|++|+....+.-+|++|+..-|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4678899999999999999999987555

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.27  E-value=0.042  Score=23.83  Aligned_cols=22  Identities=23%  Similarity=0.529  Sum_probs=18.2

Q ss_pred             CcccCcccccccCChhhhhhhh
Q psy16925        119 PYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       119 p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      .|.|+-||-.|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            3788889999999988888864

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.17  E-value=0.026  Score=29.65  Aligned_cols=28  Identities=11%  Similarity=0.085  Sum_probs=23.1

Q ss_pred             cCCCCCccchhhhhhhcCChHHHHHHHH
Q psy16925         16 NASTLGKYSLALMVTRFSSRSAVTAHTK   43 (166)
Q Consensus        16 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~   43 (166)
                      |....+.|-|..|.+.|.+...|..|.+
T Consensus         9 D~pG~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1           9 DLPGGGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCCCEEecccccCccCCHHHHHHHHc
Confidence            4455677899999999999999988876

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.73  E-value=0.067  Score=22.70  Aligned_cols=23  Identities=30%  Similarity=0.515  Sum_probs=16.3

Q ss_pred             ccCCCcCCCchhHHHHhhhhcCC
Q psy16925         95 VSCGWYPDESKDLKNHHNLHTGK  117 (166)
Q Consensus        95 ~~c~~~f~~~~~l~~H~~~h~~~  117 (166)
                      ++|+..|.-.+.|..|+-.|+||
T Consensus         9 ~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           9 ADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CCcchhhccchhhhHHhhhhcCC
Confidence            55777777777777777777664

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.48  E-value=0.037  Score=24.33  Aligned_cols=29  Identities=34%  Similarity=0.618  Sum_probs=24.1

Q ss_pred             CCCCcccCcccccccCChhhhhhhhhhcc
Q psy16925        116 GKRPYTCPWCSRTFANGSNCRSHKRRMHP  144 (166)
Q Consensus       116 ~~~p~~C~~C~~~f~~~~~l~~H~~~~h~  144 (166)
                      ++..|.|..|.+.+..-+++.+|....|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            34568999999999999999999876664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.19  E-value=0.031  Score=29.35  Aligned_cols=23  Identities=30%  Similarity=0.573  Sum_probs=20.3

Q ss_pred             CCcccCcccccccCChhhhhhhh
Q psy16925        118 RPYTCPWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       118 ~p~~C~~C~~~f~~~~~l~~H~~  140 (166)
                      ..|.|..|++.|.+...|..|++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            34889999999999999999986

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.04  E-value=0.1  Score=23.83  Aligned_cols=13  Identities=31%  Similarity=0.810  Sum_probs=8.9

Q ss_pred             CCCCcccCccccc
Q psy16925        116 GKRPYTCPWCSRT  128 (166)
Q Consensus       116 ~~~p~~C~~C~~~  128 (166)
                      ++.|-.||.|+..
T Consensus        17 g~~P~~CPvCg~~   29 (37)
T d1nnqa2          17 DEAPEYCPVCGAP   29 (37)
T ss_dssp             SCCCSBCTTTCCB
T ss_pred             CCCCCcCCCCCCc
Confidence            4566788888753

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.85  E-value=0.13  Score=21.20  Aligned_cols=20  Identities=15%  Similarity=0.361  Sum_probs=13.8

Q ss_pred             cCCCcCCCchhHHHHhhhhc
Q psy16925         96 SCGWYPDESKDLKNHHNLHT  115 (166)
Q Consensus        96 ~c~~~f~~~~~l~~H~~~h~  115 (166)
                      .|++-|.+.+.+..|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            46677777777777776663

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.38  E-value=0.28  Score=23.16  Aligned_cols=24  Identities=29%  Similarity=0.516  Sum_probs=13.8

Q ss_pred             CCCeecccchhhcCChHHHHHHHh
Q psy16925         49 ERPFVCHECGQSFASKGILQEHLT   72 (166)
Q Consensus        49 ~~~~~C~~C~~~f~~~~~l~~h~~   72 (166)
                      +.|..|+.|+....+..+|.+|..
T Consensus        22 ~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHH
Confidence            445556666666666666655543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=85.59  E-value=0.23  Score=22.42  Aligned_cols=14  Identities=36%  Similarity=0.762  Sum_probs=8.9

Q ss_pred             cCCCCcccCccccc
Q psy16925        115 TGKRPYTCPWCSRT  128 (166)
Q Consensus       115 ~~~~p~~C~~C~~~  128 (166)
                      .++.|-+||.|+..
T Consensus        16 ~g~~Pe~CPvCg~~   29 (36)
T d1yuza2          16 KGEDFEKCPICFRP   29 (36)
T ss_dssp             ESSCCSBCTTTCCB
T ss_pred             eCCCCCcCCCCCCc
Confidence            34556678888753

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.45  E-value=0.23  Score=20.11  Aligned_cols=16  Identities=31%  Similarity=0.437  Sum_probs=6.4

Q ss_pred             CCCcCCCchhHHHHhh
Q psy16925         97 CGWYPDESKDLKNHHN  112 (166)
Q Consensus        97 c~~~f~~~~~l~~H~~  112 (166)
                      |++.|.-...|..|+-
T Consensus         9 c~kafkkhnqlkvhqf   24 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQF   24 (28)
T ss_dssp             CCCEESSHHHHHHHHH
T ss_pred             chHHHhhccceEEEee
Confidence            3333344444444433

>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: BED zinc finger
domain: Zinc finger BED domain-containing protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.44  E-value=0.33  Score=24.32  Aligned_cols=30  Identities=33%  Similarity=0.481  Sum_probs=23.7

Q ss_pred             CcccCcccccccC---ChhhhhhhhhhcchhHH
Q psy16925        119 PYTCPWCSRTFAN---GSNCRSHKRRMHPEELK  148 (166)
Q Consensus       119 p~~C~~C~~~f~~---~~~l~~H~~~~h~~~~~  148 (166)
                      ...|.+|.+.++.   .++|+.|++..|+.+-.
T Consensus        22 ~i~C~lC~k~i~~~GNTtNl~~HL~~rHp~ef~   54 (60)
T d2ct5a1          22 KIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFC   54 (60)
T ss_dssp             CCEETTTTEECCCCSSTHHHHHHHHHSCHHHHH
T ss_pred             chHHHHHHHHhcccCCcchHHHHHHhcCHHHHH
Confidence            3679999887754   67899999999987643

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.58  E-value=0.34  Score=19.99  Aligned_cols=18  Identities=39%  Similarity=0.737  Sum_probs=10.5

Q ss_pred             CcccccccCChhhhhhhh
Q psy16925        123 PWCSRTFANGSNCRSHKR  140 (166)
Q Consensus       123 ~~C~~~f~~~~~l~~H~~  140 (166)
                      +-||+.|+....|..|.+
T Consensus         6 ~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTTCCEESSHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHH
Confidence            346666666666655554