Psyllid ID: psy1705

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI
ccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccEEEEcEEEEcccccHHHHHHHHHccccEEEEEEccccccccccccEEcccccccccccEEEEEEEccccEEEEEcccccccccccEEEEEccccccccccccccccc
cccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHcccccccccccccccccccccccccccEEHHHHcccccccEccccccHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcHHHcccHHHcccHHHHHHHHHHHccEEEccccccccccccccccHHHEEEccccEEEcccccHHHHHHHHHHcccEEEEEccccHHHHcccccEEcccccccccccEEEEEEEEEccEEEEEccEcccccEccEEEEEccccHHHcccccEEEEc
MTNKEWIIIFIFpqkkykkdyrkkatdskkklhwqsNHKKIHTHNQeaqqglhgytlrenhlsdlhprhYIKEMTRLTHSRIRRtlvrspesnesvlipdhldwrekgfitpdwnqedcgacyaFSIASAIQGQIFKSTSEIEELSIQQVVDCsiisgnlgcaggslrnTLNYVQFAGglmkeedypykgkqsickfkrpnivvdisswsvlppqdehALKVTLATVGpiavsinasphtFQLYasgiyddeactsdyVNHAMLLVGYTRNSWILKNwwshhwgdngymylkrgnnrcgiaNYAVYALI
mtnkewiiififpqkkykkdyrKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSrirrtlvrspesnesvlipdhldwREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI
MTNKEWIIIFIFPQkkykkdyrkkATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI
****EWIIIFIFPQKKYK*********************************LHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL********SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL*
MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM*********************VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI
MTNKEWIIIFIFPQKK********************NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI
*TNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTH********RSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query309 2.2.26 [Sep-21-2011]
Q9GLE3330 Cathepsin K OS=Sus scrofa yes N/A 0.932 0.872 0.403 1e-59
Q3ZKN1330 Cathepsin K OS=Canis fami yes N/A 0.932 0.872 0.407 1e-59
O35186329 Cathepsin K OS=Rattus nor yes N/A 0.935 0.878 0.411 2e-59
P43235329 Cathepsin K OS=Homo sapie yes N/A 0.932 0.875 0.407 3e-59
P55097329 Cathepsin K OS=Mus muscul yes N/A 0.935 0.878 0.408 3e-59
P61277329 Cathepsin K OS=Macaca mul yes N/A 0.932 0.875 0.400 4e-59
P61276329 Cathepsin K OS=Macaca fas N/A N/A 0.932 0.875 0.400 4e-59
P43236329 Cathepsin K OS=Oryctolagu yes N/A 0.922 0.866 0.4 6e-59
Q5E968329 Cathepsin K OS=Bos taurus yes N/A 0.922 0.866 0.396 1e-58
O60911334 Cathepsin L2 OS=Homo sapi no N/A 0.886 0.820 0.400 2e-57
>sp|Q9GLE3|CATK_PIG Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1 Back     alignment and function desciption
 Score =  230 bits (586), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 31  KKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 90

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 91  MTGLKVPPSHSRSNDTLYIPDWEGRT---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG 147

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 148 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 205

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 206 GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 265

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE C SD +NHA+L VGY     +  WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 266 YDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 325

Query: 305 VY 306
            +
Sbjct: 326 SF 327
Closely involved in osteoclastic bone resorption and may participate partially in the disorder of bone remodeling. Displays potent endoprotease activity against fibrinogen at acid pH. May play an important role in extracellular matrix degradation (By similarity). Mediates thyroxine liberation by limited proteolysis of thyroglobulin at neutral pH in vitro.
Sus scrofa (taxid: 9823)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: 3EC: 8
>sp|Q3ZKN1|CATK_CANFA Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1 Back     alignment and function description
>sp|O35186|CATK_RAT Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1 Back     alignment and function description
>sp|P43235|CATK_HUMAN Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1 Back     alignment and function description
>sp|P55097|CATK_MOUSE Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2 Back     alignment and function description
>sp|P61277|CATK_MACMU Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1 Back     alignment and function description
>sp|P61276|CATK_MACFA Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1 Back     alignment and function description
>sp|P43236|CATK_RABIT Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1 Back     alignment and function description
>sp|Q5E968|CATK_BOVIN Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2 Back     alignment and function description
>sp|O60911|CATL2_HUMAN Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
189233776330 PREDICTED: similar to CG5367 CG5367-PA [ 0.944 0.884 0.551 4e-98
383852029341 PREDICTED: cathepsin J-like [Megachile r 0.954 0.865 0.528 4e-92
380026639346 PREDICTED: cathepsin J-like [Apis florea 0.948 0.846 0.553 9e-92
340710175343 PREDICTED: cathepsin K-like [Bombus terr 0.935 0.842 0.537 2e-91
328789446344 PREDICTED: cathepsin J-like [Apis mellif 0.944 0.848 0.56 4e-91
350413611343 PREDICTED: cathepsin J-like [Bombus impa 0.928 0.836 0.531 2e-90
345486539332 PREDICTED: cathepsin L2-like [Nasonia vi 0.941 0.876 0.538 9e-90
322783986353 hypothetical protein SINV_08365 [Solenop 0.954 0.835 0.512 2e-89
307178052295 Cathepsin K [Camponotus floridanus] 0.912 0.955 0.540 1e-86
307195722345 Cathepsin K [Harpegnathos saltator] 0.954 0.855 0.52 4e-85
>gi|189233776|ref|XP_001814509.1| PREDICTED: similar to CG5367 CG5367-PA [Tribolium castaneum] gi|270015148|gb|EFA11596.1| cathepsin K precursor [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  363 bits (933), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 167/303 (55%), Positives = 223/303 (73%), Gaps = 11/303 (3%)

Query: 15  KKYKKDYRKKA---TDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           +K+K+ Y K      D+ +KL WQSN +KI  HN+EA +GLH Y ++EN LSD+  + Y+
Sbjct: 31  EKFKQSYNKTYYGYLDTSRKLAWQSNLEKIKKHNEEADKGLHSYYIKENDLSDMSTQSYL 90

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFS 126
           ++M +LT S  R+     PE    +      IP+ ++W EKGF TP +NQ+DCG+CYAFS
Sbjct: 91  QKMVKLTKSTHRKV---DPEVVGDLFELLHHIPEEVNWVEKGFETPSYNQKDCGSCYAFS 147

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
           IAS +Q QIFK T ++  LS QQ+VDCS+  GN GC GGSLRNTL Y++ AGGLM   DY
Sbjct: 148 IASVLQAQIFKQTEKLVPLSEQQIVDCSVSMGNYGCGGGSLRNTLRYLEKAGGLMTYSDY 207

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY  +Q  C+F +   +V++++W+VLP +DE AL++ +A +GP+A SINASPHTFQLY S
Sbjct: 208 PYLARQQRCRFDKHRAIVNLTTWAVLPARDERALELAVAKIGPVAASINASPHTFQLYHS 267

Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           G+YDD AC+S++VNHAML+VGYT+N+WILKNWW  HWG+ GYM L+RG NRCGIANYA Y
Sbjct: 268 GVYDDVACSSNHVNHAMLIVGYTKNAWILKNWWGKHWGEKGYMRLRRGKNRCGIANYAAY 327

Query: 307 ALI 309
           AL+
Sbjct: 328 ALV 330

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|383852029|ref|XP_003701533.1| PREDICTED: cathepsin J-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|380026639|ref|XP_003697053.1| PREDICTED: cathepsin J-like [Apis florea] Back     alignment and taxonomy information
>gi|340710175|ref|XP_003393670.1| PREDICTED: cathepsin K-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|328789446|ref|XP_394277.3| PREDICTED: cathepsin J-like [Apis mellifera] Back     alignment and taxonomy information
>gi|350413611|ref|XP_003490051.1| PREDICTED: cathepsin J-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|345486539|ref|XP_001604490.2| PREDICTED: cathepsin L2-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|322783986|gb|EFZ11138.1| hypothetical protein SINV_08365 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307178052|gb|EFN66897.1| Cathepsin K [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307195722|gb|EFN77562.1| Cathepsin K [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
FB|FBgn0032228338 CG5367 [Drosophila melanogaste 0.893 0.816 0.494 1.6e-77
UNIPROTKB|O60911334 CTSL2 "Cathepsin L2" [Homo sap 0.873 0.808 0.406 4.2e-57
UNIPROTKB|F1S4J6332 Ssc.54235 "Cathepsin L1" [Sus 0.906 0.843 0.391 4.2e-57
RGD|61810329 Ctsk "cathepsin K" [Rattus nor 0.883 0.829 0.424 3.3e-56
UNIPROTKB|P43235329 CTSK "Cathepsin K" [Homo sapie 0.880 0.826 0.416 5.3e-56
UNIPROTKB|G1K2A7333 CTSK "Cathepsin K" [Canis lupu 0.880 0.816 0.416 1.4e-55
UNIPROTKB|Q3ZKN1330 CTSK "Cathepsin K" [Canis lupu 0.880 0.824 0.416 1.4e-55
MGI|MGI:107823329 Ctsk "cathepsin K" [Mus muscul 0.883 0.829 0.421 1.4e-55
UNIPROTKB|Q9GLE3330 CTSK "Cathepsin K" [Sus scrofa 0.880 0.824 0.412 1.8e-55
ZFIN|ZDB-GENE-030131-106337 ctsl1a "cathepsin L, 1 a" [Dan 0.896 0.821 0.395 3.7e-55
FB|FBgn0032228 CG5367 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
 Identities = 138/279 (49%), Positives = 194/279 (69%)

Query:    34 WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
             ++ N K I  HNQ  ++G   + L+ N  +D+    Y+K   RL  S I  +     E  
Sbjct:    60 FEENFKVIEEHNQNYKEGQTSFRLKPNIFADMSTDGYLKGFLRLLKSNIEDSADNMAEIV 119

Query:    94 ESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
              S L   +P+ LDWR KGFITP +NQ  CG+CYAFSIA +I GQ+FK T +I  LS QQ+
Sbjct:   120 GSPLMANVPESLDWRSKGFITPPYNQLSCGSCYAFSIAESIMGQVFKRTGKILSLSKQQI 179

Query:   151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWS 210
             VDCS+  GN GC GGSLRNTL+Y+Q  GG+M+++DYPY  ++  C+F     VV+++SW+
Sbjct:   180 VDCSVSHGNQGCVGGSLRNTLSYLQSTGGIMRDQDYPYVARKGKCQFVPDLSVVNVTSWA 239

Query:   211 VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTR 270
             +LP +DE A++  +  +GP+A+SINASP TFQLY+ GIYDD  C+S  VNHAM+++G+ +
Sbjct:   240 ILPVRDEQAIQAAVTHIGPVAISINASPKTFQLYSDGIYDDPLCSSASVNHAMVVIGFGK 299

Query:   271 NSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
             + WILKNWW  +WG+NGY+ +++G N CGIANYA YA++
Sbjct:   300 DYWILKNWWGQNWGENGYIRIRKGVNMCGIANYAAYAIV 338
GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS
GO:0006508 "proteolysis" evidence=IEA
UNIPROTKB|O60911 CTSL2 "Cathepsin L2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S4J6 Ssc.54235 "Cathepsin L1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|61810 Ctsk "cathepsin K" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P43235 CTSK "Cathepsin K" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|G1K2A7 CTSK "Cathepsin K" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ZKN1 CTSK "Cathepsin K" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:107823 Ctsk "cathepsin K" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GLE3 CTSK "Cathepsin K" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-106 ctsl1a "cathepsin L, 1 a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P61277CATK_MACMU3, ., 4, ., 2, 2, ., 3, 80.40060.93200.8753yesN/A
Q9GLE3CATK_PIG3, ., 4, ., 2, 2, ., 3, 80.40390.93200.8727yesN/A
O35186CATK_RAT3, ., 4, ., 2, 2, ., 3, 80.41190.93520.8784yesN/A
P43235CATK_HUMAN3, ., 4, ., 2, 2, ., 3, 80.40720.93200.8753yesN/A
P43236CATK_RABIT3, ., 4, ., 2, 2, ., 3, 80.40.92230.8662yesN/A
Q3ZKN1CATK_CANFA3, ., 4, ., 2, 2, ., 3, 80.40720.93200.8727yesN/A
P55097CATK_MOUSE3, ., 4, ., 2, 2, ., 3, 80.40860.93520.8784yesN/A
Q5E968CATK_BOVIN3, ., 4, ., 2, 2, ., 3, 80.39670.92230.8662yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 2e-86
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 3e-80
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 4e-55
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 9e-41
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 1e-37
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 9e-34
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 2e-29
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 7e-23
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 2e-21
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 4e-18
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 5e-10
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 3e-08
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-07
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 9e-06
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 1e-05
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information 
 Score =  257 bits (659), Expect = 2e-86
 Identities = 100/213 (46%), Positives = 134/213 (62%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P+ +DWREKG +TP  +Q  CG+C+AFS   A++G     T ++  LS QQ+VDCS  SG
Sbjct: 1   PESVDWREKGAVTPVKDQGSCGSCWAFSTVGALEGAYAIKTGKLVSLSEQQLVDCS-TSG 59

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG+  N   YV+  GGL  E DYPY GK   CK+    +   I+ +S +PP DE 
Sbjct: 60  NNGCNGGNPDNAFEYVK-NGGLASESDYPYTGKDGTCKYNSSKVGAKITGYSNVPPGDEE 118

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTR----NSWI 274
           ALK  LA  GP++V+I+AS  +FQ Y  GIY    C++  +NHA+LLVGY      + WI
Sbjct: 119 ALKAALANYGPVSVAIDAS-SSFQFYKGGIYSGPCCSNTNLNHAVLLVGYGTENGVDYWI 177

Query: 275 LKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYA 307
           +KN W   WG+ GY+ + RG+N CGIA+YA Y 
Sbjct: 178 VKNSWGTSWGEKGYIRIARGSNLCGIASYASYP 210

Papain is an endopeptidase with specific substrate preferences, primarily for bulky hydrophobic or aromatic residues at the S2 subsite, a hydrophobic pocket in papain that accommodates the P2 sidechain of the substrate (the second residue away from the scissile bond). Most members of the papain subfamily are endopeptidases. Some exceptions to this rule can be explained by specific details of the catalytic domains like the occluding loop in cathepsin B which confers an additional carboxydipeptidyl activity and the mini-chain of cathepsin H resulting in an N-terminal exopeptidase activity. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds. Parasitic CPs act extracellularly to help invade tissues and cells, to hatch or to evade the host immune system. Mammalian CPs are primarily lysosomal enzymes with the exception of cathepsin W, which is retained in the endoplasmic reticulum. They are responsible for protein degradation in the lysosome. Papain-like CPs are synthesized as inactive proenzymes with N-terminal propeptide regions, which are removed upon activation. In addition to its inhibitory role, the propeptide is required for proper folding of the newly synthesized enzyme and its stabilization in denaturing pH conditions. Residues within the propeptide region also play a role in the transport of the proenzyme to lysosomes or acidified vesicles. Also included in this subfamily are proteins classified as non-peptidase homologs, which lack peptidase activity or have missing active site residues. Length = 210
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 309
KOG1542|consensus372 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543|consensus325 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544|consensus470 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.96
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.92
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.74
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.73
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.59
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 98.96
KOG4128|consensus 457 97.78
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 97.46
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 97.23
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.9
PF09778212 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP 92.68
COG4990195 Uncharacterized protein conserved in bacteria [Fun 92.52
PF12385166 Peptidase_C70: Papain-like cysteine protease AvrRp 89.95
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 86.76
cd02549141 Peptidase_C39A A sub-family of peptidase family C3 84.14
>KOG1542|consensus Back     alignment and domain information 
Probab=100.00  E-value=2e-86  Score=583.84  Aligned_cols=294  Identities=34%  Similarity=0.640  Sum_probs=262.3

Q ss_pred             HHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccC-ccccc
Q psy1705           7 IIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS-RIRRT   85 (309)
Q Consensus         7 ~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~-~~~~~   85 (309)
                      ...|..|+.+|+|+|.+.+|..+|+.||++|+..+++++.. +  .-|.+.|+|+|||||+|||+++++..+.. .....
T Consensus        68 ~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~-d--~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~  144 (372)
T KOG1542|consen   68 EDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQEN-D--PGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPG  144 (372)
T ss_pred             HHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhc-C--ccccccCccchhhcCHHHHHHHhhccccccccCcc
Confidence            56799999999999999999999999999999999988875 1  22778899999999999999998765542 11111


Q ss_pred             -cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCC
Q psy1705          86 -LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAG  164 (309)
Q Consensus        86 -~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~G  164 (309)
                       ....+ ......||++||||++|.||||||||+||||||||+++++|++++|++|++++||||+|+||+.  .++||+|
T Consensus       145 ~~~~~~-~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~--~d~gC~G  221 (372)
T KOG1542|consen  145 DAAEAP-IEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDS--CDNGCNG  221 (372)
T ss_pred             ccccCc-CCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccC--cCCcCCC
Confidence             11111 0135689999999999999999999999999999999999999999999999999999999996  5999999


Q ss_pred             CchHHHHHHHHHhCCCCCCCCCcCCCCCC-ccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhc
Q psy1705         165 GSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL  243 (309)
Q Consensus       165 G~~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~  243 (309)
                      |.+..||+|+++.+|+..|.+|||++..+ .|..+.....+.|.+|..++. ||++|.+.|.++|||+|+|++  ..+++
T Consensus       222 Gl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~~~~~~v~I~~f~~l~~-nE~~ia~wLv~~GPi~vgiNa--~~mQ~  298 (372)
T KOG1542|consen  222 GLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFDKSKIVVSIKDFSMLSN-NEDQIAAWLVTFGPLSVGINA--KPMQF  298 (372)
T ss_pred             CChhHHHHHHHHhCCccccccCCccccCCCccccchhhceEEEeccEecCC-CHHHHHHHHHhcCCeEEEEch--HHHHH
Confidence            99999999987777999999999999888 999999999999999999985 999999999999999999996  58999


Q ss_pred             cCCceecC--CCCCCCCCCeEEEEEEe-----CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEeeC
Q psy1705         244 YASGIYDD--EACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI  309 (309)
Q Consensus       244 y~~Gi~~~--~~~~~~~~~Hav~iVGy-----g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~  309 (309)
                      |++||..+  ..|+...++|||+||||     .++|||||||||++|||+||+||.||.|.|||+++++-+++
T Consensus       299 YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N~CGi~~mvss~~v  371 (372)
T KOG1542|consen  299 YRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGSNACGIADMVSSAAV  371 (372)
T ss_pred             hcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccccccccccchhhhhc
Confidence            99999998  67977779999999999     47899999999999999999999999999999999987653

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543|consensus Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544|consensus Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128|consensus Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF12385 Peptidase_C70: Papain-like cysteine protease AvrRpt2; InterPro: IPR022118 This is a family of cysteine proteases, found in actinobacteria, protobacteria and firmicutes Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>cd02549 Peptidase_C39A A sub-family of peptidase family C39 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 3e-58
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 1e-52
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 4e-52
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 1e-49
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 2e-48
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 2e-48
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 4e-48
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 4e-48
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 5e-48
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 1e-47
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 2e-47
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 4e-47
3hwn_A258 Cathepsin L With Az13010160 Length = 258 4e-46
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 4e-46
3of8_A221 Structural Basis For Reversible And Irreversible In 6e-45
3h89_A220 A Combined Crystallographic And Molecular Dynamics 7e-45
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 7e-45
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 6e-44
2vhs_A217 Cathsilicatein, A Chimera Length = 217 7e-44
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 7e-44
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 1e-43
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 1e-43
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 2e-41
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 3e-39
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 1e-38
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 3e-38
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 3e-38
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 3e-38
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 3e-38
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 3e-38
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 6e-38
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 6e-38
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 7e-38
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 1e-37
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 2e-37
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 2e-37
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 2e-37
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 5e-37
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 7e-37
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 7e-37
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 1e-36
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 3e-36
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 2e-35
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 2e-35
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 8e-34
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 9e-34
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 7e-32
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 2e-31
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 5e-31
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 1e-30
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 4e-30
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 1e-29
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 1e-29
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 7e-29
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 1e-28
2act_A220 Crystallographic Refinement Of The Structure Of Act 2e-28
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 4e-28
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 6e-28
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 7e-28
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 8e-28
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 2e-27
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 2e-27
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 2e-27
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 5e-27
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 6e-27
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 7e-27
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 2e-26
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 4e-26
1ppo_A216 Determination Of The Structure Of Papaya Protease O 2e-25
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 3e-25
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 5e-25
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 8e-25
1pci_A322 Procaricain Length = 322 9e-25
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 2e-24
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 2e-24
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 2e-23
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 3e-23
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 1e-22
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 5e-20
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 1e-19
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 2e-16
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 3e-16
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 4e-16
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 6e-15
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 3e-10
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 3e-10
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 3e-10
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 3e-10
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 4e-10
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 1e-08
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 2e-08
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 3e-08
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 4e-08
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 1e-07
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 2e-07
1mir_A322 Rat Procathepsin B Length = 322 4e-07
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 1e-06
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 2e-06
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 2e-06
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 3e-06
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 6e-05
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 8e-05
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 9e-05
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 1e-04
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure 
Iteration: 1

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 119/286 (41%), Positives = 168/286 (58%), Gaps = 14/286 (4%)
Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL----THSRIRRT 85
           ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++MT L    +HSR   T
Sbjct: 31  RRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDT 90
Query: 86  LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEEL 145
           L   PE       PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  L
Sbjct: 91  LY-IPEWEGRA--PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNL 147
Query: 146 SIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVD 205
           S Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY G++  C +        
Sbjct: 148 SPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAK 205
Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
              +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE+C SD +NHA+L 
Sbjct: 206 CRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLA 265
Query: 266 VGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A +
Sbjct: 266 VGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASF 311
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-115
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-113
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-112
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-111
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-107
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-106
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 6e-93
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 7e-92
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 8e-92
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 6e-91
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-90
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-90
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 3e-87
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 3e-85
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 7e-85
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-83
1cqd_A221 Protein (protease II); cysteine protease, glycopro 3e-83
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 7e-83
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 7e-83
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-82
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 3e-82
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 3e-82
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 5e-81
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-80
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 4e-80
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 8e-80
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 2e-79
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-76
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 2e-76
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 8e-76
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-75
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 6e-67
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 7e-61
3u8e_A222 Papain-like cysteine protease; papain-like cystein 1e-59
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 3e-57
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 9e-55
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 1e-53
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 1e-53
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 2e-53
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 6e-09
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
 Score =  334 bits (858), Expect = e-115
 Identities = 117/302 (38%), Positives = 170/302 (56%), Gaps = 8/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 15  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 74

Query: 74  MTRLTHSRIRRTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT L           +    E     PD +D+R+KG++TP  NQ  CG+C+AFS   A++
Sbjct: 75  MTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALE 134

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+ K T ++  LS Q +VDC   S N GC GG + N   YVQ   G+  E+ YPY G++
Sbjct: 135 GQLKKKTGKLLNLSPQNLVDCV--SENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE 192

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE
Sbjct: 193 ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDE 252

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
           +C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A + 
Sbjct: 253 SCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 312

Query: 308 LI 309
            +
Sbjct: 313 KM 314
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.81
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.79
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.99
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 97.87
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 97.77
3erv_A236 Putative C39-like peptidase; structural genomics, 93.03
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
Probab=100.00  E-value=1.4e-89  Score=629.32  Aligned_cols=306  Identities=31%  Similarity=0.583  Sum_probs=276.3

Q ss_pred             CChHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccC
Q psy1705           1 MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS   80 (309)
Q Consensus         1 ~~~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~   80 (309)
                      .++..+...|++||++|+|+|.+.+|+.+|+.||++|+++|++||+++++++.+|++|+|+|+|||.|||++++++...+
T Consensus        13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~   92 (331)
T 3qj3_A           13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMP   92 (331)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCC
T ss_pred             CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccc
Confidence            36888999999999999999998889999999999999999999999888899999999999999999999988765433


Q ss_pred             ccc--cc-cccCCC---CCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCC--CCcCCHHHHHh
Q psy1705          81 RIR--RT-LVRSPE---SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSE--IEELSIQQVVD  152 (309)
Q Consensus        81 ~~~--~~-~~~~~~---~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~--~~~lS~q~l~d  152 (309)
                      ...  .. .+..+.   .....+||++||||++|+||||||||.||||||||++++||++++++++.  .+.||+|+|+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~Lvd  172 (331)
T 3qj3_A           93 ADLHKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVD  172 (331)
T ss_dssp             SSTTTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHH
T ss_pred             ccccccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhh
Confidence            211  11 121110   00134899999999999999999999999999999999999999999998  89999999999


Q ss_pred             hcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEE
Q psy1705         153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV  232 (309)
Q Consensus       153 c~~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v  232 (309)
                      |+..  +.||+||++..|++|+++++||++|++|||.+.++.|........+++++|..|+..++++||++|+++|||+|
T Consensus       173 C~~~--~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v  250 (331)
T 3qj3_A          173 CVPN--ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAV  250 (331)
T ss_dssp             HCTT--SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCEEE
T ss_pred             hccC--CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCEEE
Confidence            9974  88999999999999999888999999999999999999888888889999999987799999999999999999


Q ss_pred             EEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC-CcccccceeeEe
Q psy1705         233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYA  307 (309)
Q Consensus       233 ~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p  307 (309)
                      +|++. .+|++|++|||..+.|+...++|||+||||    |++|||||||||++||++|||||+|+. |.|||++.++||
T Consensus       251 ~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p  329 (331)
T 3qj3_A          251 AFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVP  329 (331)
T ss_dssp             EECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEE
T ss_pred             EEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCceeee
Confidence            99998 559999999999999966789999999999    678999999999999999999999976 999999999999


Q ss_pred             eC
Q psy1705         308 LI  309 (309)
Q Consensus       308 ~~  309 (309)
                      +|
T Consensus       330 ~v  331 (331)
T 3qj3_A          330 TL  331 (331)
T ss_dssp             EC
T ss_pred             eC
Confidence            86
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 309
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 1e-58
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 3e-50
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 8e-48
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 1e-46
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 2e-46
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 6e-46
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 1e-45
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 2e-43
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 1e-42
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 2e-41
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 1e-40
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 3e-39
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 4e-39
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 6e-39
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 2e-38
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 3e-38
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 2e-37
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 7e-37
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 2e-36
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 6e-28
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 4e-04
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (478), Expect = 1e-58
 Identities = 108/307 (35%), Positives = 163/307 (53%), Gaps = 15/307 (4%)

Query: 15  KKYKKDYRKKATDSKKKLH---WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
            K+K  + +    +++      W+ N K I  HNQE ++G H +T+  N   D+    + 
Sbjct: 13  TKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFR 72

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           + M    + + R+  V           P  +DWREKG++TP  NQ  CG+C+AFS   A+
Sbjct: 73  QVMNGFQNRKPRKGKVFQEPLFYE--APRSVDWREKGYVTPVKNQGQCGSCWAFSATGAL 130

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+F+ T  +  LS Q +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  
Sbjct: 131 EGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEAT 190

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           +  CK+     V + + +    P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +
Sbjct: 191 EESCKYNPKYSVANDAGFVD-IPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFE 249

Query: 252 EACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
             C+S+ ++H +L+VGY   S        W++KN W   WG  GY+ + +   N CGIA+
Sbjct: 250 PDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIAS 309

Query: 303 YAVYALI 309
            A Y  +
Sbjct: 310 AASYPTV 316
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d3gcba_458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.76
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.7
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 97.4
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 97.1
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-84  Score=590.15  Aligned_cols=302  Identities=35%  Similarity=0.693  Sum_probs=269.1

Q ss_pred             hHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccCcc
Q psy1705           3 NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRI   82 (309)
Q Consensus         3 ~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~   82 (309)
                      +..+...|++||++|+|+|++ +|+.+|+.||.+|++.|++||+++..++.+|+||+|+|+|||+|||.+++.....+..
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            355678899999999999977 5889999999999999999999988889999999999999999999999876554332


Q ss_pred             ccc-cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCC
Q psy1705          83 RRT-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLG  161 (309)
Q Consensus        83 ~~~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~g  161 (309)
                      ... ....+   ...+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+...++.+
T Consensus        84 ~~~~~~~~~---~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~~~  160 (316)
T d1cs8a_          84 RKGKVFQEP---LFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEG  160 (316)
T ss_dssp             SCCEECCCC---TTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCG
T ss_pred             ccCccccCc---ccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccCCC
Confidence            222 22222   35689999999999999999999999999999999999999999999999999999999997767889


Q ss_pred             CCCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhh
Q psy1705         162 CAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF  241 (309)
Q Consensus       162 c~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f  241 (309)
                      |.||++..|++|++.++++.+|..|||.+....|..........+..+.... .+++.|+++|+.+|||+|++++...+|
T Consensus       161 c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv~v~i~~~~~~f  239 (316)
T d1cs8a_         161 CNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIP-KQEKALMKAVATVGPISVAIDAGHESF  239 (316)
T ss_dssp             GGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECC-SCHHHHHHHHHHHCCEEEEECCCSHHH
T ss_pred             CCCCchHHHHHHHHhcCccccccccccccccccccccccccccccccccccc-CcHHHHHHHHHHhCCeEEEEEeccchh
Confidence            9999999999999999568899999999988888877666667777777766 489999999999999999999977889


Q ss_pred             hccCCceecCCCCCCCCCCeEEEEEEe--------CCCEEEEEcCCCCCCCCCceEEEEec-CCcccccceeeEeeC
Q psy1705         242 QLYASGIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI  309 (309)
Q Consensus       242 ~~y~~Gi~~~~~~~~~~~~Hav~iVGy--------g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~~p~~  309 (309)
                      ++|++|||..+.|+...++|||+||||        |.+|||||||||++|||+|||||+|+ .|+|||++.++||+|
T Consensus       240 ~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~n~CGI~~~~~yP~v  316 (316)
T d1cs8a_         240 LFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV  316 (316)
T ss_dssp             HTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred             ccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCCCcCccCCeeeeeeC
Confidence            999999999999976778999999999        45799999999999999999999996 599999999999997
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure