Psyllid ID: psy17097

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATREPPPWEPESYKLIVNINTEVKSIPVTKKGVYFAFRDQGACISLLAIKV
Secondary Structure (PSIPRED)
cEEEcccccccccEEEEEEEccccccccccEEEEcEEEcccccEEEEEEEEEEEccccccccccccccEEEEEEEEEcccccccccccccccEEEEEEEEEEEEEEccccEEEEEEEEcccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccEEcccccccEEEEEEEccccccccccEcccccccccEEEEEEEEEEEccccccccccccccccEEEEEEEcccccccccccccccccEEEEEEcEEcccccccccEEEEEHccccEEEEEEEEc
Coil and Loop (DISEMBL)
WVEESFTNFEKGINWRSYVVCDVAYhnvnnwlwtpfiergnanrIYIEIKFTirdcalfpgnalsckeTFSLLYYEfdaatrepppwepesyKLIVNINTevksipvtkkgvYFAFRDQGACISLLAIKV
Flexible Loop (DISEMBL)
wveesftnfekginwrSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATREPPPWEPESYKLIVNINTEVKSIPVTKKGVYFAFRDQGACISLLAIKV
Low Complexity Region (SEG)
WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATREPPPWEPESYKLIVNINTEVKSIPVTKKGVYFAFRDQGACISLLAIKV
Disordered region (IsUnstruct)
*****FTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATREPPPWEPESYKLIVNINTEVKSIPVTKKGVYFAFRDQGACISLLAI**
Disordered Region (DISOPRED)
WVEESF*NFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDA*******WEPESYKLIVNINTEVKSIPVTKKGVYFAFRDQGACISLLAIKV
Disordered Region (DISEMBL)
WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATREPPPWEPESYKLIVNINTEVKSIPVTKKGVYFAFRDQGACISLLAIKV
Disordered Region (DISPRO)
W**ESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATREPPPWEPESYKLIVNINTEVKSIPVTKKGVYFAFRDQGACISLLAIKV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATREPPPWEPESYKLIVNINTEVKSIPVTKKGVYFAFRDQGACISLLAIKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
P29323	1055	Ephrin type-B receptor 2	yes	N/A	0.976	0.120	0.416	1e-25
P28693	1004	Ephrin type-B receptor 2	yes	N/A	0.976	0.126	0.416	2e-25
P54763	994	Ephrin type-B receptor 2	yes	N/A	0.976	0.127	0.416	3e-25
P09759	984	Ephrin type-B receptor 1	no	N/A	0.976	0.129	0.409	5e-25
Q8CBF3	984	Ephrin type-B receptor 1	no	N/A	0.976	0.129	0.409	5e-25
P54762	984	Ephrin type-B receptor 1	no	N/A	0.976	0.129	0.409	6e-25
Q07498	988	Ephrin type-B receptor 3	no	N/A	0.969	0.127	0.402	3e-24
Q90344	987	Ephrin type-B receptor 2	N/A	N/A	0.976	0.128	0.395	6e-24
P54753	998	Ephrin type-B receptor 3	no	N/A	0.969	0.126	0.402	1e-23
O13146	981	Ephrin type-A receptor 3	no	N/A	0.992	0.131	0.393	1e-23

>sp|P29323|EPHB2_HUMAN Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 PE=1 SV=5

 Score =  115 bits (287), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P  
Sbjct: 44  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSV 103

Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------EPESYKL------IVNINTEV 102
             SCKETF+L YYE  FD+AT+  P W              ES+        ++ INTEV
Sbjct: 104 PGSCKETFNLYYYEADFDSATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEV 163

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 164 RSFGPVSRSGFYLAFQDYGGCMSLIAVRV 192

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Functions in axon guidance during development. Involved in the guidance of commissural axons, that form a major interhemispheric connection between the 2 temporal lobs of the cerebral cortex. Also involved in guidance of contralateral inner ear efferent growth cones at the midline and of retinal ganglion cell axons to the optic disk. Beside axon guidance, also regulates dendritic spines development and maturation and stimulates the formation of excitatory synapses. Upon activation by EFNB1, abolishes the ARHGEF15-mediated negative regulation on excitatory synapse formation. Controls other aspects of development including angiogenesis, palate development and in inner ear development through regulation of endolymph production. Forward and reverse signaling through the EFNB2/EPHB2 complex regulate movement and adhesion of cells that tubularize the urethra and septate the cloaca. May function as a tumor suppressor.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 1

>sp|P28693|EPHB2_CHICK Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3

 Score =  114 bits (284), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T +I R  A+RI++E+KF++RDC+  P  
Sbjct: 45  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKYIRRRGAHRIHVEMKFSVRDCSSIPNV 104

Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------EPESYKL------IVNINTEV 102
             SCKETF+L YYE  FD+AT+  P W              ES+        ++ INTEV
Sbjct: 105 PGSCKETFNLYYYESDFDSATKTFPNWMENPWMKVDTIAADESFSQVDLGGRVMKINTEV 164

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV+K G Y AF+D G C+SL+A++V
Sbjct: 165 RSFGPVSKNGFYLAFQDYGGCMSLIAVRV 193

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Functions in axon guidance during development. Beside axon guidance, also regulates dendritic spines development and maturation and stimulates the formation of excitatory synapses.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P54763|EPHB2_MOUSE Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 PE=1 SV=2

 Score =  113 bits (283), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P  
Sbjct: 52  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSV 111

Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------EPESYKL------IVNINTEV 102
             SCKETF+L YYE  FD AT+  P W              ES+        ++ INTEV
Sbjct: 112 PGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEV 171

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 172 RSFGPVSRNGFYLAFQDYGGCMSLIAVRV 200

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Functions in axon guidance during development. Involved in the guidance of commissural axons, that form a major interhemispheric connection between the 2 temporal lobs of the cerebral cortex. Also involved in guidance of contralateral inner ear efferent growth cones at the midline and of retinal ganglion cell axons to the optic disk. Beside axon guidance, also regulates dendritic spines development and maturation and stimulates the formation of excitatory synapses. Upon activation by EFNB1, abolishes the ARHGEF15-mediated negative regulation on excitatory synapse formation. Controls other aspects of development including angiogenesis, palate development and in inner ear development through regulation of endolymph production. Forward and reverse signaling through the EFNB2/EPHB2 complex regulate movement and adhesion of cells that tubularize the urethra and septate the cloaca. May function as a tumor suppressor.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P09759|EPHB1_RAT Ephrin type-B receptor 1 OS=Rattus norvegicus GN=Ephb1 PE=1 SV=2

 Score =  112 bits (281), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 88/149 (59%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   N NNWL T FI R  A+RIY E++FT+RDC+  P  
Sbjct: 43  EEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNV 102

Query: 63  ALSCKETFSLLYYEFDA--ATREPPPWEPESY------------------KLIVNINTEV 102
             SCKETF+L YYE D+  AT++   W    Y                    ++ +NTEV
Sbjct: 103 PGSCKETFNLYYYETDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEV 162

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  P+T+ G Y AF+D GAC+SLL+++V
Sbjct: 163 RSFGPLTRNGFYLAFQDYGACMSLLSVRV 191

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Cognate/functional ephrin ligands for this receptor include EFNB1, EFNB2 and EFNB3. During nervous system development, regulates retinal axon guidance redirecting ipsilaterally ventrotemporal retinal ganglion cells axons at the optic chiasm midline. This probably requires repulsive interaction with EFNB2. In the adult nervous system together with EFNB3, regulates chemotaxis, proliferation and polarity of the hippocampus neural progenitors. Beside its role in axon guidance plays also an important redundant role with other ephrin-B receptors in development and maturation of dendritic spines and synapse formation. May also regulate angiogenesis. More generally, may play a role in targeted cell migration and adhesion. Upon activation by EFNB1 and probably other ephrin-B ligands activates the MAPK/ERK and the JNK signaling cascades to regulate cell migration and adhesion respectively.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q8CBF3|EPHB1_MOUSE Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 PE=1 SV=1

 Score =  112 bits (281), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 88/149 (59%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   N NNWL T FI R  A+RIY E++FT+RDC+  P  
Sbjct: 43  EEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNV 102

Query: 63  ALSCKETFSLLYYEFDA--ATREPPPWEPESY------------------KLIVNINTEV 102
             SCKETF+L YYE D+  AT++   W    Y                    ++ +NTEV
Sbjct: 103 PGSCKETFNLYYYETDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEV 162

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  P+T+ G Y AF+D GAC+SLL+++V
Sbjct: 163 RSFGPLTRNGFYLAFQDYGACMSLLSVRV 191

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Cognate/functional ephrin ligands for this receptor include EFNB1, EFNB2 and EFNB3. During nervous system development, regulates retinal axon guidance redirecting ipsilaterally ventrotemporal retinal ganglion cells axons at the optic chiasm midline. This probably requires repulsive interaction with EFNB2. In the adult nervous system together with EFNB3, regulates chemotaxis, proliferation and polarity of the hippocampus neural progenitors. Beside its role in axon guidance plays also an important redundant role with other ephrin-B receptors in development and maturation of dendritic spines and synapse formation. May also regulate angiogenesis. More generally, may play a role in targeted cell migration and adhesion. Upon activation by EFNB1 and probably other ephrin-B ligands activates the MAPK/ERK and the JNK signaling cascades to regulate cell migration and adhesion respectively.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P54762|EPHB1_HUMAN Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 PE=1 SV=1

 Score =  112 bits (281), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 88/149 (59%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   N NNWL T FI R  A+RIY E++FT+RDC+  P  
Sbjct: 43  EEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNV 102

Query: 63  ALSCKETFSLLYYEFDA--ATREPPPWEPESY------------------KLIVNINTEV 102
             SCKETF+L YYE D+  AT++   W    Y                    ++ +NTEV
Sbjct: 103 PGSCKETFNLYYYETDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEV 162

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  P+T+ G Y AF+D GAC+SLL+++V
Sbjct: 163 RSFGPLTRNGFYLAFQDYGACMSLLSVRV 191

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Cognate/functional ephrin ligands for this receptor include EFNB1, EFNB2 and EFNB3. During nervous system development, regulates retinal axon guidance redirecting ipsilaterally ventrotemporal retinal ganglion cells axons at the optic chiasm midline. This probably requires repulsive interaction with EFNB2. In the adult nervous system together with EFNB3, regulates chemotaxis, proliferation and polarity of the hippocampus neural progenitors. Beside its role in axon guidance plays also an important redundant role with other ephrin-B receptors in development and maturation of dendritic spines and synapse formation. May also regulate angiogenesis. More generally, may play a role in targeted cell migration and adhesion. Upon activation by EFNB1 and probably other ephrin-B ligands activates the MAPK/ERK and the JNK signaling cascades to regulate cell migration and adhesion respectively.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q07498|EPHB3_CHICK Ephrin type-B receptor 3 (Fragment) OS=Gallus gallus GN=EPHB3 PE=2 SV=1

 Score =  110 bits (274), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 18/144 (12%)

Query: 4   ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   N NNWL T FI+R +  R+Y+E+KFT+RDC   P  
Sbjct: 35  EEVSGYDEAMNPIRTYQVCNVREANQNNWLRTKFIQRQDVQRVYVELKFTVRDCNSIPNI 94

Query: 63  ALSCKETFSLLYYE--FDAATREPPPWEPESYKLIVNI--------------NTEVKSI- 105
             SCKETF+L YYE   D+A+   P W    Y  +  I              NT+V+S  
Sbjct: 95  PGSCKETFNLFYYESDTDSASANSPFWMENPYIKVDTIAPDESFSKLESGRVNTKVRSFG 154

Query: 106 PVTKKGVYFAFRDQGACISLLAIK 129
           P++K G Y AF+D GAC+SL++++
Sbjct: 155 PLSKNGFYLAFQDLGACMSLISVR 178

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Generally has an overlapping and redundant function with EPHB2. Like EPHB2, functions in axon guidance during development. Beside its role in axon guidance plays also an important redundant role with other ephrin-B receptors in development and maturation of dendritic spines and the formation of excitatory synapses. May control other aspects of development through regulation of cell migration and positioning.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q90344|EPHB2_COTJA Ephrin type-B receptor 2 OS=Coturnix coturnix japonica GN=EPHB2 PE=2 SV=1

 Score =  109 bits (272), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T +I R  A+RI++E+KF++RDC+  P  
Sbjct: 45  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKYIRRRGAHRIHVEMKFSVRDCSSIPNV 104

Query: 63  ALSCKETFSLLYYE--FDAATREPPPWEPESYK------------------LIVNINTEV 102
             SCKETF+L YYE  FD+AT+  P W    +                    ++ INTEV
Sbjct: 105 PGSCKETFNLYYYESDFDSATKTFPNWMENPWMKVDTIAADERFSQVDLGGRVMKINTEV 164

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV+K G Y AF+D   C+SL+A++V
Sbjct: 165 RSFGPVSKNGFYLAFQDYWGCMSLIAVRV 193

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Functions in axon guidance during development. Beside axon guidance, also regulates dendritic spines development and maturation and stimulates the formation of excitatory synapses.

Coturnix coturnix japonica (taxid: 93934)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P54753|EPHB3_HUMAN Ephrin type-B receptor 3 OS=Homo sapiens GN=EPHB3 PE=1 SV=2

 Score =  108 bits (270), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 18/144 (12%)

Query: 4   ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R +  R+Y+E+KFT+RDC   P  
Sbjct: 63  EEVSGYDEAMNPIRTYQVCNVRESSQNNWLRTGFIWRRDVQRVYVELKFTVRDCNSIPNI 122

Query: 63  ALSCKETFSLLYYEFDA--ATREPPPWEPESYKLIVNI--------------NTEVKSI- 105
             SCKETF+L YYE D+  A+   P W    Y  +  I              NT+V+S  
Sbjct: 123 PGSCKETFNLFYYEADSDVASASSPFWMENPYVKVDTIAPDESFSRLDAGRVNTKVRSFG 182

Query: 106 PVTKKGVYFAFRDQGACISLLAIK 129
           P++K G Y AF+DQGAC+SL++++
Sbjct: 183 PLSKAGFYLAFQDQGACMSLISVR 206

Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Generally has an overlapping and redundant function with EPHB2. Like EPHB2, functions in axon guidance during development regulating for instance the neurons forming the corpus callosum and the anterior commissure, 2 major interhemispheric connections between the temporal lobs of the cerebral cortex. Beside its role in axon guidance plays also an important redundant role with other ephrin-B receptors in development and maturation of dendritic spines and the formation of excitatory synapses. Controls other aspects of development through regulation of cell migration and positioning. This includes angiogenesis, palate development and thymic epithelium development for instance. Forward and reverse signaling through the EFNB2/EPHB3 complex also regulate migration and adhesion of cells that tubularize the urethra and septate the cloaca. Finally, plays an important role in intestinal epithelium differentiation segregating progenitor from differentiated cells in the crypt.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|O13146|EPHA3_DANRE Ephrin type-A receptor 3 OS=Danio rerio GN=epha3 PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 87/150 (58%), Gaps = 21/150 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + E+ I  R+Y VC+V   N NNWL T  I+R  A R+Y+EIKFT+RDC   P
Sbjct: 52  WEEISVMD-ERNIPMRTYQVCNVMEANQNNWLRTGLIQREGAQRVYVEIKFTLRDCNSLP 110

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKL-------------------IVNINTE 101
           G   +CKETF++ Y+E + A   P     ES  +                   ++ +NTE
Sbjct: 111 GVPGTCKETFNVYYHESNNAVAAPLRHIRESQYIKIDTIAADESFTQTDVGDRVMKLNTE 170

Query: 102 VKSIP-VTKKGVYFAFRDQGACISLLAIKV 130
           V+ I  ++K+G+Y AF+D GACI+L++++V
Sbjct: 171 VRDISGLSKRGLYLAFQDLGACIALVSVRV 200

Receptor tyrosine kinase which binds promiscuously membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous for ephrin-A ligands it binds preferentially efna5. Upon activation by efna5 regulates cell-cell adhesion, cytoskeletal organization and cell migration. Plays a role in cardiac cells migration and differentiation probably through activation by efna1. Involved in the retinotectal mapping of neurons. May also control the segregation but not the guidance of motor and sensory axons during neuromuscular circuit development.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
321468300	936	hypothetical protein DAPPUDRAFT_104369 [	1.0	0.138	0.834	2e-64
345493863	1014	PREDICTED: ephrin type-A receptor 4-A-li	1.0	0.128	0.820	3e-64
270012761	1007	Eph receptor tyrosine kinase [Tribolium	1.0	0.129	0.834	3e-64
189239812	911	PREDICTED: similar to ephrin receptor is	1.0	0.142	0.834	3e-64
345493865	1023	PREDICTED: ephrin type-A receptor 4-A-li	1.0	0.127	0.820	5e-64
322797536	986	hypothetical protein SINV_04228 [Solenop	1.0	0.131	0.820	3e-63
241839420	902	eph receptor tyrosine kinase, putative [	1.0	0.144	0.772	4e-63
383854812	999	PREDICTED: ephrin type-A receptor 4-A-li	1.0	0.130	0.809	7e-63
61316393	996	Eph receptor tyrosine kinase precursor [	1.0	0.130	0.813	1e-62
350427811	1055	PREDICTED: ephrin type-A receptor 4-A-li	1.0	0.123	0.806	2e-62

>gi|321468300|gb|EFX79285.1| hypothetical protein DAPPUDRAFT_104369 [Daphnia pulex]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 121/145 (83%), Positives = 127/145 (87%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNFEKGINWRSYVVCDVAY+NVNNWLWTPFIERG ANRIYIEIKF++RDC+LFP
Sbjct: 8   WVEESFTNFEKGINWRSYVVCDVAYNNVNNWLWTPFIERGEANRIYIEIKFSMRDCSLFP 67

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           G ALSCKETFSLLYYEFDAATREPPPWEPESYKLI               V INTEV+SI
Sbjct: 68  GTALSCKETFSLLYYEFDAATREPPPWEPESYKLIDRIAADEGRFTSSNEVIINTEVRSI 127

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGACISLLAI+V
Sbjct: 128 PVTKKGVYFAFRDQGACISLLAIRV 152

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493863|ref|XP_001606593.2| PREDICTED: ephrin type-A receptor 4-A-like isoform 1 [Nasonia vitripennis]

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 119/145 (82%), Positives = 128/145 (88%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNF+KGINWRSYVVCDVAY+NVNNWLWTPFI+RG ANR+YIEIKFT+RDC+LFP
Sbjct: 57  WVEESFTNFDKGINWRSYVVCDVAYNNVNNWLWTPFIDRGPANRMYIEIKFTVRDCSLFP 116

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           GNALSCKETFSLLYYEFDAAT+EPPPWEP+SYKLI               V INTEVKSI
Sbjct: 117 GNALSCKETFSLLYYEFDAATKEPPPWEPDSYKLIGRIAANEGRFNSNTEVIINTEVKSI 176

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGACISLLAIK+
Sbjct: 177 PVTKKGVYFAFRDQGACISLLAIKI 201

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270012761|gb|EFA09209.1| Eph receptor tyrosine kinase [Tribolium castaneum]

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 121/145 (83%), Positives = 127/145 (87%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNF+KGINWRSYVVCDVAY+NVNNWLWTPFI+RG ANRIYIEIKFTIRDC+LFP
Sbjct: 51  WVEESFTNFQKGINWRSYVVCDVAYNNVNNWLWTPFIDRGVANRIYIEIKFTIRDCSLFP 110

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           GNALSCKETFSLLYYEFDAATREPPPW+ + YKLI               VNINTEVKSI
Sbjct: 111 GNALSCKETFSLLYYEFDAATREPPPWDADRYKLIGRIAAGEGRFNSNSEVNINTEVKSI 170

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGACISLLAIKV
Sbjct: 171 PVTKKGVYFAFRDQGACISLLAIKV 195

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239812|ref|XP_966603.2| PREDICTED: similar to ephrin receptor isoform 1 [Tribolium castaneum]

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 121/145 (83%), Positives = 127/145 (87%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNF+KGINWRSYVVCDVAY+NVNNWLWTPFI+RG ANRIYIEIKFTIRDC+LFP
Sbjct: 51  WVEESFTNFQKGINWRSYVVCDVAYNNVNNWLWTPFIDRGVANRIYIEIKFTIRDCSLFP 110

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           GNALSCKETFSLLYYEFDAATREPPPW+ + YKLI               VNINTEVKSI
Sbjct: 111 GNALSCKETFSLLYYEFDAATREPPPWDADRYKLIGRIAAGEGRFNSNSEVNINTEVKSI 170

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGACISLLAIKV
Sbjct: 171 PVTKKGVYFAFRDQGACISLLAIKV 195

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493865|ref|XP_003427167.1| PREDICTED: ephrin type-A receptor 4-A-like isoform 2 [Nasonia vitripennis]

 Score =  248 bits (634), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 119/145 (82%), Positives = 128/145 (88%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNF+KGINWRSYVVCDVAY+NVNNWLWTPFI+RG ANR+YIEIKFT+RDC+LFP
Sbjct: 57  WVEESFTNFDKGINWRSYVVCDVAYNNVNNWLWTPFIDRGPANRMYIEIKFTVRDCSLFP 116

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           GNALSCKETFSLLYYEFDAAT+EPPPWEP+SYKLI               V INTEVKSI
Sbjct: 117 GNALSCKETFSLLYYEFDAATKEPPPWEPDSYKLIGRIAANEGRFNSNTEVIINTEVKSI 176

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGACISLLAIK+
Sbjct: 177 PVTKKGVYFAFRDQGACISLLAIKI 201

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322797536|gb|EFZ19580.1| hypothetical protein SINV_04228 [Solenopsis invicta]

 Score =  246 bits (627), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 119/145 (82%), Positives = 125/145 (86%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNF+KGINWRSYVVCDVAY NVNNWLWTPFIERG ANR+YIEI FT RDC+LFP
Sbjct: 1   WVEESFTNFDKGINWRSYVVCDVAYTNVNNWLWTPFIERGPANRMYIEINFTTRDCSLFP 60

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           GNALSCKETFSLLYYEFDAAT+EPPPWEP+SYKLI               V INTEVKSI
Sbjct: 61  GNALSCKETFSLLYYEFDAATKEPPPWEPDSYKLIGRIAPGEGRFNTNTEVMINTEVKSI 120

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGACIS+LAIKV
Sbjct: 121 PVTKKGVYFAFRDQGACISILAIKV 145

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241839420|ref|XP_002415239.1| eph receptor tyrosine kinase, putative [Ixodes scapularis] gi|215509451|gb|EEC18904.1| eph receptor tyrosine kinase, putative [Ixodes scapularis]

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 112/145 (77%), Positives = 124/145 (85%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNFE+GINWRSYVVCDVAY NVNNWLWTPFIERG A+RIYIE+KF++RDC LFP
Sbjct: 22  WVEESFTNFEQGINWRSYVVCDVAYENVNNWLWTPFIERGPAHRIYIELKFSMRDCNLFP 81

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           G ALSCKETFSLLYYEFDAATREPPPWEPESY+ +               V INTEV+S+
Sbjct: 82  GMALSCKETFSLLYYEFDAATREPPPWEPESYRPVDRIAADEGRFTSNAEVIINTEVRSV 141

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGAC+SL+A+KV
Sbjct: 142 PVTKKGVYFAFRDQGACLSLIAVKV 166

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854812|ref|XP_003702914.1| PREDICTED: ephrin type-A receptor 4-A-like [Megachile rotundata]

 Score =  244 bits (623), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 119/147 (80%), Positives = 126/147 (85%), Gaps = 17/147 (11%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNF+KGINWRSYVVCDVAY+NVNNWLWTPFIERG ANR+YIEIKFT RDC+LFP
Sbjct: 42  WVEESFTNFDKGINWRSYVVCDVAYNNVNNWLWTPFIERGPANRMYIEIKFTTRDCSLFP 101

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI-----------------VNINTEVK 103
           GNALSCKETFSLLYYEFDAAT+EPPPWE +SYKLI                 V INTEVK
Sbjct: 102 GNALSCKETFSLLYYEFDAATKEPPPWETDSYKLIGRIAAGDGRFNTNTNTEVVINTEVK 161

Query: 104 SIPVTKKGVYFAFRDQGACISLLAIKV 130
           SIPVTKKGVYFAFRDQGACIS+LAIKV
Sbjct: 162 SIPVTKKGVYFAFRDQGACISILAIKV 188

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|61316393|ref|NP_001013024.1| Eph receptor tyrosine kinase precursor [Apis mellifera] gi|60256561|gb|AAX14899.1| ephrin receptor [Apis mellifera]

 Score =  244 bits (622), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/145 (81%), Positives = 125/145 (86%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNF+KGINWRSYVVCDVAY+NVNNWLWTPFIERG ANR+YIEIKFT RDC+LFP
Sbjct: 42  WVEESFTNFDKGINWRSYVVCDVAYNNVNNWLWTPFIERGPANRMYIEIKFTTRDCSLFP 101

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           GNALSCKETFSLLYYEFD AT+EPPPWE +SYKLI               V INTEVKSI
Sbjct: 102 GNALSCKETFSLLYYEFDVATKEPPPWETDSYKLIGRIAAGEGRFNTNTEVVINTEVKSI 161

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGACIS+LAIKV
Sbjct: 162 PVTKKGVYFAFRDQGACISILAIKV 186

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427811|ref|XP_003494889.1| PREDICTED: ephrin type-A receptor 4-A-like [Bombus impatiens]

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/145 (80%), Positives = 125/145 (86%), Gaps = 15/145 (10%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           WVEESFTNF+KGINWRSYVVCDVAY+NVNNWLWTPFIERG ANR+YIEI+FT RDC+LFP
Sbjct: 101 WVEESFTNFDKGINWRSYVVCDVAYNNVNNWLWTPFIERGPANRMYIEIQFTTRDCSLFP 160

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
           GNALSCKETFSLLYYEFD AT+EPPPWE +SYKLI               V INTEVKSI
Sbjct: 161 GNALSCKETFSLLYYEFDVATKEPPPWETDSYKLIGRIAAGEGRFNTNTGVVINTEVKSI 220

Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           PVTKKGVYFAFRDQGACIS+LAIKV
Sbjct: 221 PVTKKGVYFAFRDQGACISILAIKV 245

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
FB|FBgn0025936	1096	Eph "Eph receptor tyrosine kin	1.0	0.118	0.772	3.5e-57
UNIPROTKB|F8WDG5	281	EPHB1 "Ephrin type-B receptor	0.684	0.316	0.456	7.4e-27
UNIPROTKB|F1SL88	239	F1SL88 "Uncharacterized protei	0.684	0.372	0.456	7.4e-27
ZFIN|ZDB-GENE-080220-42	256	zgc:171602 "zgc:171602" [Danio	0.684	0.347	0.456	2.5e-26
UNIPROTKB|F1MHZ5	282	EPHA4 "Uncharacterized protein	0.592	0.273	0.525	1.3e-25
UNIPROTKB|F1SR65	289	F1SR65 "Uncharacterized protei	0.592	0.266	0.525	1.3e-25
UNIPROTKB|I3LG50	253	I3LG50 "Uncharacterized protei	0.592	0.304	0.525	1.3e-25
UNIPROTKB|Q6NVW1	482	EPHB2 "Ephrin type-B receptor	0.646	0.174	0.471	3.1e-25
UNIPROTKB|F1MII5	953	F1MII5 "Uncharacterized protei	0.684	0.093	0.456	2.7e-24
UNIPROTKB|F1PNA5	984	EPHB1 "Uncharacterized protein	0.684	0.090	0.456	3e-24

FB|FBgn0025936 Eph "Eph receptor tyrosine kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 597 (215.2 bits), Expect = 3.5e-57, P = 3.5e-57
 Identities = 112/145 (77%), Positives = 126/145 (86%)

Query:     1 WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
             WVEESFT+F KGINWRSYVVCDVAYHNVNNWLW+PFI+RG+ANR+YIEI+FTIRDC+LFP
Sbjct:   112 WVEESFTDFVKGINWRSYVVCDVAYHNVNNWLWSPFIDRGSANRLYIEIQFTIRDCSLFP 171

Query:    61 GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI---------------VNINTEVKSI 105
             GNALSCKETFSLL+YEFDAATREPPPW+ +SY+LI               V+INTEVKSI
Sbjct:   172 GNALSCKETFSLLFYEFDAATREPPPWQTDSYRLIARIAAGEGRFNQNSDVDINTEVKSI 231

Query:   106 PVTKKGVYFAFRDQGACISLLAIKV 130
              V KKGVYFAFRDQGACIS+LA+KV
Sbjct:   232 AVNKKGVYFAFRDQGACISVLAVKV 256

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=ISS;NAS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005003 "ephrin receptor activity" evidence=ISS

GO:0007165 "signal transduction" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS;NAS

GO:0004713 "protein tyrosine kinase activity" evidence=NAS

GO:0007409 "axonogenesis" evidence=NAS

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0048013 "ephrin receptor signaling pathway" evidence=IEA

GO:0016319 "mushroom body development" evidence=IMP

GO:0035011 "melanotic encapsulation of foreign target" evidence=IMP

GO:0007422 "peripheral nervous system development" evidence=IMP

UNIPROTKB|F8WDG5 EPHB1 "Ephrin type-B receptor 1" [Homo sapiens (taxid:9606)]

 Score = 209 (78.6 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
 Identities = 42/92 (45%), Positives = 58/92 (63%)

Query:     4 ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
             E  + +++ +N  R+Y VC+V   N NNWL T FI R  A+RIY E++FT+RDC+  P  
Sbjct:    43 EEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNV 102

Query:    63 ALSCKETFSLLYYEFDA--ATREPPPWEPESY 92
               SCKETF+L YYE D+  AT++   W    Y
Sbjct:   103 PGSCKETFNLYYYETDSVIATKKSAFWSEAPY 134

GO:0005003 "ephrin receptor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SL88 F1SL88 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 209 (78.6 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
 Identities = 42/92 (45%), Positives = 58/92 (63%)

Query:     4 ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
             E  + +++ +N  R+Y VC+V   N NNWL T FI R  A+RIY E++FT+RDC+  P  
Sbjct:     2 EEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNV 61

Query:    63 ALSCKETFSLLYYEFDA--ATREPPPWEPESY 92
               SCKETF+L YYE D+  AT++   W    Y
Sbjct:    62 PGSCKETFNLYYYETDSVIATKKSAFWSEAPY 93

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005003 "ephrin receptor activity" evidence=IEA

ZFIN|ZDB-GENE-080220-42 zgc:171602 "zgc:171602" [Danio rerio (taxid:7955)]

 Score = 205 (77.2 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 42/92 (45%), Positives = 57/92 (61%)

Query:     4 ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
             E  + +++ +N  R+Y VC+V   N NNWL T FI R  A RIY+E++FT+RDC+  P  
Sbjct:    29 EEVSGYDENLNTIRTYQVCNVFESNQNNWLLTTFIARRGAQRIYVEMRFTVRDCSSIPRV 88

Query:    63 ALSCKETFSLLYYEFDA--ATREPPPWEPESY 92
               SCKETF+L YYE D+  AT+    W    Y
Sbjct:    89 PGSCKETFNLYYYETDSVIATKGTAFWMEAPY 120

GO:0005003 "ephrin receptor activity" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0048013 "ephrin receptor signaling pathway" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

UNIPROTKB|F1MHZ5 EPHA4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 198 (74.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
 Identities = 41/78 (52%), Positives = 50/78 (64%)

Query:     1 WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
             W E S  + EK    R+Y VC+V   + NNWL T +I R  A R+YIEIKFT+RDC   P
Sbjct:    54 WEEVSIMD-EKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLP 112

Query:    61 GNALSCKETFSLLYYEFD 78
             G   +CKETF+L YYE D
Sbjct:   113 GVMGTCKETFNLYYYESD 130

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005003 "ephrin receptor activity" evidence=IEA

UNIPROTKB|F1SR65 F1SR65 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 198 (74.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
 Identities = 41/78 (52%), Positives = 50/78 (64%)

Query:     1 WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
             W E S  + EK    R+Y VC+V   + NNWL T +I R  A R+YIEIKFT+RDC   P
Sbjct:    50 WEEVSIMD-EKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLP 108

Query:    61 GNALSCKETFSLLYYEFD 78
             G   +CKETF+L YYE D
Sbjct:   109 GVMGTCKETFNLYYYESD 126

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005003 "ephrin receptor activity" evidence=IEA

UNIPROTKB|I3LG50 I3LG50 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 198 (74.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
 Identities = 41/78 (52%), Positives = 50/78 (64%)

Query:     1 WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
             W E S  + EK    R+Y VC+V   + NNWL T +I R  A R+YIEIKFT+RDC   P
Sbjct:    25 WEEVSIMD-EKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLP 83

Query:    61 GNALSCKETFSLLYYEFD 78
             G   +CKETF+L YYE D
Sbjct:    84 GVMGTCKETFNLYYYESD 101

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005003 "ephrin receptor activity" evidence=IEA

UNIPROTKB|Q6NVW1 EPHB2 "Ephrin type-B receptor 2" [Homo sapiens (taxid:9606)]

 Score = 210 (79.0 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
 Identities = 41/87 (47%), Positives = 59/87 (67%)

Query:     4 ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
             E  + +++ +N  R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P  
Sbjct:    44 EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSV 103

Query:    63 ALSCKETFSLLYYE--FDAATREPPPW 87
               SCKETF+L YYE  FD+AT+  P W
Sbjct:   104 PGSCKETFNLYYYEADFDSATKTFPNW 130

GO:0005003 "ephrin receptor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1MII5 F1MII5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 209 (78.6 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
 Identities = 42/92 (45%), Positives = 58/92 (63%)

Query:     4 ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
             E  + +++ +N  R+Y VC+V   N NNWL T FI R  A+RIY E++FT+RDC+  P  
Sbjct:    21 EEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNV 80

Query:    63 ALSCKETFSLLYYEFDA--ATREPPPWEPESY 92
               SCKETF+L YYE D+  AT++   W    Y
Sbjct:    81 PGSCKETFNLYYYETDSVIATKKSAFWSEAPY 112

GO:0070372 "regulation of ERK1 and ERK2 cascade" evidence=IEA

GO:0061351 "neural precursor cell proliferation" evidence=IEA

GO:0060997 "dendritic spine morphogenesis" evidence=IEA

GO:0060326 "cell chemotaxis" evidence=IEA

GO:0051965 "positive regulation of synapse assembly" evidence=IEA

GO:0050965 "detection of temperature stimulus involved in sensory perception of pain" evidence=IEA

GO:0048593 "camera-type eye morphogenesis" evidence=IEA

GO:0046328 "regulation of JNK cascade" evidence=IEA

GO:0045121 "membrane raft" evidence=IEA

GO:0031901 "early endosome membrane" evidence=IEA

GO:0031589 "cell-substrate adhesion" evidence=IEA

GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030010 "establishment of cell polarity" evidence=IEA

GO:0021952 "central nervous system projection neuron axonogenesis" evidence=IEA

GO:0021631 "optic nerve morphogenesis" evidence=IEA

GO:0008046 "axon guidance receptor activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005005 "transmembrane-ephrin receptor activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1PNA5 EPHB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 209 (78.6 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
 Identities = 42/92 (45%), Positives = 58/92 (63%)

Query:     4 ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
             E  + +++ +N  R+Y VC+V   N NNWL T FI R  A+RIY E++FT+RDC+  P  
Sbjct:    43 EEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFIHRRGAHRIYAEMRFTVRDCSSLPNV 102

Query:    63 ALSCKETFSLLYYEFDA--ATREPPPWEPESY 92
               SCKETF+L YYE D+  AT++   W    Y
Sbjct:   103 PGSCKETFNLYYYETDSVIATKKSAFWSEAPY 134

GO:0070372 "regulation of ERK1 and ERK2 cascade" evidence=IEA

GO:0061351 "neural precursor cell proliferation" evidence=IEA

GO:0060997 "dendritic spine morphogenesis" evidence=IEA

GO:0060326 "cell chemotaxis" evidence=IEA

GO:0051965 "positive regulation of synapse assembly" evidence=IEA

GO:0050965 "detection of temperature stimulus involved in sensory perception of pain" evidence=IEA

GO:0048593 "camera-type eye morphogenesis" evidence=IEA

GO:0046328 "regulation of JNK cascade" evidence=IEA

GO:0045121 "membrane raft" evidence=IEA

GO:0031901 "early endosome membrane" evidence=IEA

GO:0031589 "cell-substrate adhesion" evidence=IEA

GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030010 "establishment of cell polarity" evidence=IEA

GO:0021952 "central nervous system projection neuron axonogenesis" evidence=IEA

GO:0021631 "optic nerve morphogenesis" evidence=IEA

GO:0008046 "axon guidance receptor activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005005 "transmembrane-ephrin receptor activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	130
pfam01404	178	pfam01404, Ephrin_lbd, Ephrin receptor ligand bind	2e-65
cd10319	177	cd10319, EphR_LBD, Ligand Binding Domain of Ephrin	5e-63
smart00615	177	smart00615, EPH_lbd, Ephrin receptor ligand bindin	4e-54
cd10473	173	cd10473, EphR_LBD_A, Ligand Binding Domain of Ephr	1e-36
cd10472	176	cd10472, EphR_LBD_B, Ligand Binding Domain of Ephr	5e-35
cd10477	178	cd10477, EphR_LBD_B2, Ligand Binding Domain of Eph	2e-32
cd10478	173	cd10478, EphR_LBD_B3, Ligand Binding Domain of Eph	1e-31
cd10476	176	cd10476, EphR_LBD_B1, Ligand Binding Domain of Eph	2e-30
cd10482	174	cd10482, EphR_LBD_A4, Ligand Binding Domain of Eph	3e-30
cd10485	177	cd10485, EphR_LBD_A7, Ligand Binding Domain of Eph	6e-30
cd10480	174	cd10480, EphR_LBD_A2, Ligand Binding Domain of Eph	1e-29
cd10487	173	cd10487, EphR_LBD_A10, Ligand Binding Domain of Ep	6e-29
cd10483	173	cd10483, EphR_LBD_A5, Ligand Binding Domain of Eph	5e-28
cd10486	173	cd10486, EphR_LBD_A8, Ligand Binding Domain of Eph	9e-28
cd10481	173	cd10481, EphR_LBD_A3, Ligand Binding Domain of Eph	1e-27
cd10474	180	cd10474, EphR_LBD_B4, Ligand Binding Domain of Eph	7e-27
cd10484	173	cd10484, EphR_LBD_A6, Ligand Binding Domain of Eph	3e-26
cd10475	180	cd10475, EphR_LBD_B6, Ligand Binding Domain of Eph	3e-24
cd10479	177	cd10479, EphR_LBD_A1, Ligand Binding Domain of Eph	2e-20

>gnl|CDD|216481 pfam01404, Ephrin_lbd, Ephrin receptor ligand binding domain

 Score =  195 bits (498), Expect = 2e-65
 Identities = 73/151 (48%), Positives = 94/151 (62%), Gaps = 22/151 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + E G   R+Y VC+V   N NNWL T FIERG A RIY+E+KFT+RDC+ FP
Sbjct: 24  WEEVSGVD-ENGRPIRTYQVCNVMEPNQNNWLRTNFIERGGAQRIYVELKFTVRDCSSFP 82

Query: 61  GNALSCKETFSLLYYEFDA--ATREPPPWEPESYKLI------------------VNINT 100
           G A SCKETF+L YYE D   A +EPP W    Y  I                  + +NT
Sbjct: 83  GVAGSCKETFNLYYYESDTDYAGKEPPNWRESPYTKIDTIAADESFTQRDLGSRVMKLNT 142

Query: 101 EVKSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           E +SI P++K+G Y AF+DQGAC++LL+++V
Sbjct: 143 ETRSIGPLSKRGFYLAFQDQGACMALLSVRV 173

The Eph receptors, which bind to ephrins pfam00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand. Length = 178

>gnl|CDD|198439 cd10319, EphR_LBD, Ligand Binding Domain of Ephrin Receptors

 Score =  189 bits (483), Expect = 5e-63
 Identities = 80/150 (53%), Positives = 99/150 (66%), Gaps = 21/150 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W EES  + + G N R+YVVC+VA  N +NWL TPFIER  A RIY+E+KFT+RDC  FP
Sbjct: 25  WDEESGLDPD-GANIRTYVVCNVAMPNQDNWLRTPFIERRGAQRIYVELKFTVRDCESFP 83

Query: 61  GNALSCKETFSLLYYEFDA--ATREPPPWEPESYKLI-----------------VNINTE 101
           GNA SCKETF+L YYE D   AT+E PPW  + Y  I                   +NTE
Sbjct: 84  GNARSCKETFNLYYYESDHDTATKEFPPWNEDPYTKIDTIAADESFKSSNEDTTEKLNTE 143

Query: 102 VKSI-PVTKKGVYFAFRDQGACISLLAIKV 130
            +SI P+TK+G Y AF+DQGAC+SLL++KV
Sbjct: 144 TRSIGPLTKRGFYLAFQDQGACMSLLSVKV 173

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). They are subdivided into 2 groups, A and B type receptors, depending on their ligand ephrin-A or ephrin-B, respectively. In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 177

>gnl|CDD|128877 smart00615, EPH_lbd, Ephrin receptor ligand binding domain

 Score =  167 bits (425), Expect = 4e-54
 Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 22/151 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + E G   R+Y VC+V   N NNWL T FI R  A RIY+E+KFT+RDC+  P
Sbjct: 24  WEEVSGMD-ENGTPIRTYQVCNVQEGNQNNWLRTNFIRRRGAQRIYVELKFTVRDCSSLP 82

Query: 61  GNALSCKETFSLLYYEFDA--ATREPPPWEPESYKLIVNI------------------NT 100
           G   SCKETF+L YYE D   AT   P W    Y  +  I                  NT
Sbjct: 83  GVGGSCKETFNLYYYESDTDTATNTLPNWMENPYTKVDTIAADESFTGGDVGKRNVKLNT 142

Query: 101 EVKSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           EV+S+ P++KKG Y AF+DQGAC++L++++V
Sbjct: 143 EVRSLGPLSKKGFYLAFQDQGACVALVSVRV 173

Length = 177

>gnl|CDD|198441 cd10473, EphR_LBD_A, Ligand Binding Domain of Ephrin type-A Receptors

 Score =  122 bits (309), Expect = 1e-36
 Identities = 61/132 (46%), Positives = 82/132 (62%), Gaps = 17/132 (12%)

Query: 16  RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYY 75
           R+Y VC+V   N NNWL T +I RG A RIYIE+KFT+RDC  FPG   +CKETF+L Y 
Sbjct: 38  RTYQVCNVMEPNQNNWLRTNWIYRGEAQRIYIELKFTLRDCNSFPGVLGTCKETFNLYYM 97

Query: 76  EFDA----ATREPPPWE------PESYKL------IVNINTEVKSI-PVTKKGVYFAFRD 118
           E D       RE    +       ES+        I+ +NTEV+ + P+TKKG Y AF+D
Sbjct: 98  ESDLDLGRNIRENQFTKIDTIAADESFTQGDLGDRIMKLNTEVREVGPLTKKGFYLAFQD 157

Query: 119 QGACISLLAIKV 130
            GAC++L++++V
Sbjct: 158 VGACVALVSVRV 169

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 173

>gnl|CDD|198440 cd10472, EphR_LBD_B, Ligand Binding Domain of Ephrin type-B receptors

 Score =  118 bits (298), Expect = 5e-35
 Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 21/136 (15%)

Query: 16  RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYY 75
           R+Y VC+V   N NNWL T FI R  A+R+Y+E+KFT+RDC+  P    SCKETF+L YY
Sbjct: 37  RTYQVCNVFESNQNNWLRTKFIRRRGAHRVYVEMKFTVRDCSSIPNVPGSCKETFNLYYY 96

Query: 76  E--FDAATREPPPW------------EPESYKLI------VNINTEVKSI-PVTKKGVYF 114
           E   D AT+  P W              ES+  +      + +NTEV+S  P+++ G Y 
Sbjct: 97  ESDSDIATKTSPFWMENPYVKVDTIAADESFSQVDLGGRVMKVNTEVRSFGPLSRNGFYL 156

Query: 115 AFRDQGACISLLAIKV 130
           AF+D GAC+SL++++V
Sbjct: 157 AFQDYGACMSLISVRV 172

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. They play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphB receptors are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of colon cancer progression. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 176

>gnl|CDD|198445 cd10477, EphR_LBD_B2, Ligand Binding Domain of Ephrin type-B Receptor 2

 Score =  112 bits (281), Expect = 2e-32
 Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T +I R  A+RI++E+KF++RDC+  P  
Sbjct: 26  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKYIRRRGAHRIHVEMKFSVRDCSSIPSV 85

Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------EPESYKL------IVNINTEV 102
             SCKETF+L YYE  FD+AT+  P W              ES+        ++ INTEV
Sbjct: 86  PGSCKETFNLYYYESDFDSATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEV 145

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 146 RSFGPVSRNGFYLAFQDYGGCMSLIAVRV 174

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. EphB2 plays a role in cell positioning in the gastrointestinal tract by being expressed in proliferating progenitor cells. It also has been implicated in colorectal cancer. A loss of EphB2, as well as EphA4, also precedes memory decline in a murine model of Alzheimers disease. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 178

>gnl|CDD|198446 cd10478, EphR_LBD_B3, Ligand Binding Domain of Ephrin type-B Receptor 3

 Score =  110 bits (275), Expect = 1e-31
 Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 17/132 (12%)

Query: 16  RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYY 75
           R+Y VC+V   N NNWL T FI R +  R+Y+E+KFT+RDC   P    SCKETF+L YY
Sbjct: 38  RTYQVCNVRESNQNNWLRTGFIPRRDVQRVYVELKFTVRDCNSIPNIPGSCKETFNLFYY 97

Query: 76  EFDA--ATREPPPWEPESYKLIVNI--------------NTEVKSI-PVTKKGVYFAFRD 118
           E D+  A+   P W    Y  +  I              NT+V+S  P++K G Y AF+D
Sbjct: 98  ESDSDSASASSPFWMENPYVKVDTIAPDESFSRLDSGRVNTKVRSFGPLSKAGFYLAFQD 157

Query: 119 QGACISLLAIKV 130
            GAC+SL++++ 
Sbjct: 158 LGACMSLISVRA 169

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. EphB3 plays a role in cell positioning in the gastrointestinal tract by being preferentially expressed in Paneth cells. It also has been implicated in early colorectal cancer and early stage squamous cell lung cancer. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 173

>gnl|CDD|198444 cd10476, EphR_LBD_B1, Ligand Binding Domain of Ephrin type-B Receptor 1

 Score =  107 bits (267), Expect = 2e-30
 Identities = 61/149 (40%), Positives = 88/149 (59%), Gaps = 22/149 (14%)

Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   N NNWL T FI R  A+RIY E++FT+RDC+  P  
Sbjct: 24  EEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNV 83

Query: 63  ALSCKETFSLLYYEFDA--ATREPPPWEPESY------------------KLIVNINTEV 102
             SCKETF+L YYE D+  AT++   W    Y                    ++ +NTEV
Sbjct: 84  PGSCKETFNLYYYETDSVIATKKSAFWTEAPYLKVDTIAADESFSQVDFGGRLMKVNTEV 143

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  P+T+ G Y AF+D GAC+SLL+++V
Sbjct: 144 RSFGPLTRNGFYLAFQDYGACMSLLSVRV 172

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. Using EphB1 knockout-mice, EphB1 has been shown to be essential to the development of long-term potentiation (LTP), a cellular model of synaptic plasticity, learning and memory formation. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 176

>gnl|CDD|198450 cd10482, EphR_LBD_A4, Ligand Binding Domain of Ephrin type-A Receptor 4

 Score =  106 bits (265), Expect = 3e-30
 Identities = 62/148 (41%), Positives = 87/148 (58%), Gaps = 20/148 (13%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + EK    R+Y VC+V   + NNWL T +I R  A R+YIEIKFT+RDC   P
Sbjct: 25  WEEVSIMD-EKNTPIRTYQVCNVMEPSQNNWLRTDWIPREGAQRVYIEIKFTLRDCNSLP 83

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKL-----------------IVNINTEVK 103
           G   +CKETF+L YYE +   +E    E +  K+                 I+ +NTEV+
Sbjct: 84  GVMGTCKETFNLYYYESNN-DKERFIRENQFVKIDTIAADESFTQVDIGDRIMKLNTEVR 142

Query: 104 SI-PVTKKGVYFAFRDQGACISLLAIKV 130
            + P++KKG Y AF+D GACI+L++++V
Sbjct: 143 DVGPLSKKGFYLAFQDVGACIALVSVRV 170

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. A loss of EphA4, as well as EphB2, precedes memory decline in a murine model of Alzheimers disease. EphA4 has been shown to have a negative effect on axon regeneration and functional restoration in corticospinal lesions and is downregulated in some cervical cancers. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 174

>gnl|CDD|198453 cd10485, EphR_LBD_A7, Ligand Binding Domain of Ephrin type-A Receptor 7

 Score =  105 bits (264), Expect = 6e-30
 Identities = 61/132 (46%), Positives = 83/132 (62%), Gaps = 17/132 (12%)

Query: 16  RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYY 75
           R+Y VC V   N NNWL T +I +GNA RI++E+KFT+RDC   PG   +CKETF+L YY
Sbjct: 40  RTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYY 99

Query: 76  EFDAAT----REPPPWE------PESY------KLIVNINTEVKSI-PVTKKGVYFAFRD 118
           E D  T    RE    +       ES+      +  + +NTEV+ I P++KKG Y AF+D
Sbjct: 100 ETDYDTGRNIRENQYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQD 159

Query: 119 QGACISLLAIKV 130
            GACI+L+++KV
Sbjct: 160 VGACIALVSVKV 171

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA7 has been implicated in various cancers, including prostate, gastic and colorectal cancers. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 177

>gnl|CDD|198448 cd10480, EphR_LBD_A2, Ligand Binding Domain of Ephrin type-A Receptor 2

 Score =  104 bits (262), Expect = 1e-29
 Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 17/130 (13%)

Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEF 77
           Y VC+V     +NWL T +I R  A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 40  YSVCNVMSGEQDNWLRTNWIYRSEAERIFIELKFTVRDCNSFPGGAGSCKETFNLYYAES 99

Query: 78  DA--------------ATREPPPWEPES--YKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
           D                T  P      S      V +N E +S+ P+T+KG Y AF+D G
Sbjct: 100 DVDYGTNFQKRQFRKIDTIAPDEITVSSDFETRNVKLNVEERSVGPLTRKGFYLAFQDIG 159

Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 160 ACVALLSVRV 169

EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA2 negatively regulates cell differentiation and has been shown to be overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. Length = 174

>gnl|CDD|198455 cd10487, EphR_LBD_A10, Ligand Binding Domain of Ephrin type-A Receptor 10

 Score =  103 bits (257), Expect = 6e-29
 Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 17/132 (12%)

Query: 16  RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYY 75
           R+Y VC+V   N NNWL T +I RG   RI+IE++FT+RDC   PG A +CKETF+L Y 
Sbjct: 38  RTYQVCNVMEPNQNNWLQTGWISRGRGQRIFIELQFTLRDCNSIPGVAGTCKETFNLYYA 97

Query: 76  EFDA----ATREPPPWE------PESY------KLIVNINTEVKSI-PVTKKGVYFAFRD 118
           E DA      RE  P +       ES+      +  + +NTEV+ I  ++++G + AF+D
Sbjct: 98  ESDADLGRRLRESRPRKIDTIAADESFTQGDLGERKMKLNTEVREIGHLSRRGFHLAFQD 157

Query: 119 QGACISLLAIKV 130
            GAC++L++++V
Sbjct: 158 VGACVALVSVRV 169

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction results in cell-cell repulsion or adhesion. Length = 173

>gnl|CDD|198451 cd10483, EphR_LBD_A5, Ligand Binding Domain of Ephrin type-A Receptor 5

 Score =  100 bits (251), Expect = 5e-28
 Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 17/131 (12%)

Query: 17  SYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE 76
           +Y VC V   N NNWL T +I    A+RI+IE+KFT+RDC   PG   +CKETF++ Y+E
Sbjct: 39  TYQVCKVMEQNQNNWLLTSWISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNVYYFE 98

Query: 77  ----------------FDAATREPPPWEPESYKLIVNINTEVKSI-PVTKKGVYFAFRDQ 119
                            D    +    E +    ++ +NTEV+ + P+TKKG Y AF+D 
Sbjct: 99  SNDEDGRNIRENQYIKIDTIAADESFTELDLGDRVMKLNTEVRDVGPLTKKGFYLAFQDL 158

Query: 120 GACISLLAIKV 130
           GACI+L++++V
Sbjct: 159 GACIALVSVRV 169

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA5 is almost exclusively expressed in the nervous system. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 173

>gnl|CDD|198454 cd10486, EphR_LBD_A8, Ligand Binding Domain of Ephrin type-A Receptor 8

 Score =  100 bits (249), Expect = 9e-28
 Identities = 54/131 (41%), Positives = 81/131 (61%), Gaps = 17/131 (12%)

Query: 17  SYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE 76
           +Y VC+V   N NNWL T +++R  A R+Y EIKFT+RDC   PG   +CKETF+L YYE
Sbjct: 39  TYQVCNVMSPNQNNWLRTNWVQRDGARRVYAEIKFTLRDCNSMPGVLGTCKETFNLYYYE 98

Query: 77  FD----AATREPPPWE------PESYKLI------VNINTEVKSI-PVTKKGVYFAFRDQ 119
            D     +T E    +       ES+  +      + +NTEV+ + P++K+G Y AF+D 
Sbjct: 99  SDRDLGTSTWESQFLKIDTIAADESFTNVDLGVRRLKLNTEVRGVGPLSKRGFYLAFQDI 158

Query: 120 GACISLLAIKV 130
           GACI++++++V
Sbjct: 159 GACIAIVSVRV 169

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA8 has been implicated in various cancers. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 173

>gnl|CDD|198449 cd10481, EphR_LBD_A3, Ligand Binding Domain of Ephrin type-A Receptor 3

 Score = 99.7 bits (248), Expect = 1e-27
 Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 17/132 (12%)

Query: 16  RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYY 75
           R+Y VC+V  H+ NNWL T +I R +A +IY+E+KFT+RDC   P    +CKETF+L Y 
Sbjct: 38  RTYQVCNVMDHSQNNWLRTNWIPRNSAQKIYVELKFTLRDCNSIPLVLGTCKETFNLYYM 97

Query: 76  EFDAA----------TREPPPWEPESYKL------IVNINTEVKSI-PVTKKGVYFAFRD 118
           E D            T+       ES+        I+ +NTEV+ + PV+KKG Y AF+D
Sbjct: 98  ESDEDQGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEVREVGPVSKKGFYLAFQD 157

Query: 119 QGACISLLAIKV 130
            GAC++L++++V
Sbjct: 158 VGACVALVSVRV 169

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA3 has been implicated in leukemia, lung and other cancers. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. Length = 173

>gnl|CDD|198442 cd10474, EphR_LBD_B4, Ligand Binding Domain of Ephrin type-B Receptor 4

 Score = 98.1 bits (244), Expect = 7e-27
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 24/144 (16%)

Query: 10  EKGINWRSYVVCDVAY-HNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKE 68
           E+  + R+Y VCD        +WL T ++ R  A  +Y  ++FT+ +C   P    SCKE
Sbjct: 34  EEQHSVRTYEVCDAQRAGGQAHWLRTGWVPRRGAVHVYATLRFTMLECLSLPRAGRSCKE 93

Query: 69  TFSLLYYEFDA--ATREPPPWEPESYKLI--------------------VNINTEVKSIP 106
           TF++ YYE DA  AT   P W    Y  +                    VN+ T ++  P
Sbjct: 94  TFTVFYYESDADTATAHTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVNVKT-LRLGP 152

Query: 107 VTKKGVYFAFRDQGACISLLAIKV 130
           ++K G Y AF+DQGAC++LL++ +
Sbjct: 153 LSKAGFYLAFQDQGACMALLSLHL 176

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. EphB4 plays a role in osteoblast differentiation and has been linked to multiple myeloma. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 180

>gnl|CDD|198452 cd10484, EphR_LBD_A6, Ligand Binding Domain of Ephrin type-A Receptor 6

 Score = 96.2 bits (239), Expect = 3e-26
 Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 21/133 (15%)

Query: 17  SYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE 76
           +Y VC+V   N NNWL T +I R  A +IY+E+KFT+RDC   P    +CKETF+L Y E
Sbjct: 39  TYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVVGTCKETFNLHYME 98

Query: 77  FDAATREPPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFR 117
            D A      ++P  Y  I                  + +NTEV+ + P+T+KG Y AF+
Sbjct: 99  SDEA--HAVKFKPNQYSKIDTIAADESFTQMDLGDRILKLNTEVREVGPITRKGFYLAFQ 156

Query: 118 DQGACISLLAIKV 130
           D GACI+L++++V
Sbjct: 157 DIGACIALVSVRV 169

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA6, like other Eph receptors and their ephrin ligands, seems to play a role in neural development, underlying learning and memory. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 173

>gnl|CDD|198443 cd10475, EphR_LBD_B6, Ligand Binding Domain of Ephrin type-B Receptor 6

 Score = 91.5 bits (227), Expect = 3e-24
 Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 24/139 (17%)

Query: 16  RSYVVCDVAYH--NVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLL 73
           R++ VC+VA      +NWL T FIER  A+R+++ + F++RDCA       +C+ETF+L 
Sbjct: 38  RTFEVCNVAAQGPGQDNWLRTHFIERRGAHRVHVRLHFSVRDCASLGVPGGTCRETFTLY 97

Query: 74  YYEFDA--ATREPPPWEPESYKLI-------------------VNINTEVKSI-PVTKKG 111
           Y + D      +   W    +  +                   + +N + +S  P+T++G
Sbjct: 98  YRQADEPDEPADKSEWHEGPWTKVDTIAADESFPASLGKGGQGLQMNVKERSFGPLTQRG 157

Query: 112 VYFAFRDQGACISLLAIKV 130
            Y AF+D GAC+SL+A+KV
Sbjct: 158 FYLAFQDSGACLSLVAVKV 176

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. EphB6, a kinase-defective member of this family, is downregulated in MDA-MB-231-breast cancer cells and myeloid cancers and upregulated in neuroblasoma and glioblastoma. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Length = 180

>gnl|CDD|198447 cd10479, EphR_LBD_A1, Ligand Binding Domain of Ephrin type-A Receptor 1

 Score = 81.2 bits (200), Expect = 2e-20
 Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 24/126 (19%)

Query: 27  NVNNWLWTPFIERGN-ANRIYIEIKFTIRDCALFPGNA--LSCKETFSLLYYEFD----- 78
           + ++WL + +I RG  A+RIY+E++FT+RDC  FPG A  L CKETF+L Y E D     
Sbjct: 50  DTDHWLRSNWIYRGEEASRIYVELQFTVRDCKSFPGGAGPLGCKETFNLYYMESDQDVGI 109

Query: 79  -------------AATREPPPWEPESYKLIVNINTEVKSI-PVTKKGVYFAFRDQGACIS 124
                        AA +     +  S    V +N E  S+  +T++G+Y AF + GAC++
Sbjct: 110 QLRRPLFQKVTTVAADQSFTIRDLASGS--VKLNVERCSLGKLTRRGLYLAFHNPGACVA 167

Query: 125 LLAIKV 130
           L++++V
Sbjct: 168 LVSVRV 173

Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA1 is downregulated in some advanced colorectal and myeloid cancers and upregulated in neuroblasoma and glioblastoma. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. Length = 177

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
PF01404	178	Ephrin_lbd: Ephrin receptor ligand binding domain;	100.0
KOG0196|consensus	996		100.0
smart00615	177	EPH_lbd Ephrin receptor ligand binding domain.	100.0
smart00615	177	EPH_lbd Ephrin receptor ligand binding domain.	100.0
PF07675	167	Cleaved_Adhesin: Cleaved Adhesin Domain; InterPro:	94.79

>PF01404 Ephrin_lbd: Ephrin receptor ligand binding domain; InterPro: IPR001090 Interactions between the Eph receptor tyrosine kinases and their membrane-bound ligands, ephrins are promiscuous, but largely fall into two groups: EphA receptors bind to GPI-anchored ephrin-A ligands, while EphB receptors bind to ephrin-B proteins that have a transmembrane and cytoplasmic domain []

Probab=100.00  E-value=3.6e-64  Score=393.12  Aligned_cols=127  Identities=50%  Similarity=0.990  Sum_probs=110.9

Q ss_pred             cceecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR   82 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~   82 (130)
                      ||+|++|++.+ +||||||+|+.++|||||||+||+|+||+||||||+||||||+|+|+++++|||||||||||+|.+.+
T Consensus        25 ~e~s~~d~~~~~~rty~vC~v~~~~q~NWLrT~~I~r~~A~rv~Vel~Ft~rdC~s~~~~~~sCkETFnLyy~esd~~~~  104 (178)
T PF01404_consen   25 EEVSGLDENGNPIRTYQVCNVMESNQNNWLRTPFIPRRGASRVYVELKFTMRDCSSFPGVAGSCKETFNLYYYESDSDDA  104 (178)
T ss_dssp             EEEEEEETTSEEEEEEEEEGTTSSS-EEEEE---EE-TT-SSEEEEEEEEEB-GGGSTTSTTTSBSEEEEEEEEESSSTT
T ss_pred             eecccccCCCCeeEEEeeCCCCCCCCCCeEEcccEECCCCcEEEEEEEEEehhcccCCCCCCcccceeeeeeeecccccc
Confidence            57888987766 99999999999999999999999999999999999999999999999999999999999999998433


Q ss_pred             --CCCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 --EPPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 --~~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                        ..|+|++++|+||                  +++|+|+|+| ||||+||||||||+||||||+||||
T Consensus       105 ~~~~~~~~~~~y~kvdTIAade~f~~~~~~~~~~~~Nte~~s~g~ls~~GfYLAfqD~GAC~aL~sVrV  173 (178)
T PF01404_consen  105 TSNSPAWNENPYTKVDTIAADESFTQSDFGDRSVKLNTETRSFGPLSKRGFYLAFQDQGACMALLSVRV  173 (178)
T ss_dssp             TSSSSSSSGCCSEEEEEEE-SSEBEEEECTTEEEEEEEEEEEES--SSSEEEEEEEESSBEEEEEEEEE
T ss_pred             cccccccCcccccccccccccccccccccCCceeEEEeeeeeccccCcceEEEEeccCCceEEEEEEEE
Confidence              4689999999999                  5899999999 9999999999999999999999997

Remarkably, ephrin-B proteins transduce signals, such that bidirectional signalling can occur upon interaction with Eph receptor. An important role of Eph receptors and ephrins is to mediate cell-contact-dependent repulsion. Eph receptors and ephrins also act at boundaries to channel neuronal growth cones along specific pathways, restrict the migration of neural crest cells, and via bidirectional signalling prevent intermingling between hindbrain segments. Intriguingly, Eph receptors and ephrins can also trigger an adhesive response of endothelial cells and are required for the remodelling of blood vessels []. Biochemical studies suggest that the extent of multimerisation of Eph receptors modulates the cellular response and that the actin cytoskeleton is one major target of the intracellular pathways activated by Eph receptors []. Eph receptors and ephrins have thus emerged as key regulators of the repulsion and adhesion of cells that underlie the establishment, maintenance, and remodelling of patterns of cellular organisation [].; GO: 0005003 ephrin receptor activity, 0005524 ATP binding, 0016020 membrane; PDB: 2BBA_A 2HLE_A 3NRU_L 1SHW_B 1KGY_A 3ETP_A 1NUK_A 2WO2_A 3CKH_A 2WO3_A ....

>KOG0196|consensus

Probab=100.00  E-value=5.3e-61  Score=437.38  Aligned_cols=127  Identities=54%  Similarity=0.946  Sum_probs=122.9

Q ss_pred             cceecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR   82 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~   82 (130)
                      ||+|++||+.. +||||||||++++|||||||+||+|+||+||||||+||+|||+|+|+++++|||||||||||+|.|.+
T Consensus        52 ee~s~~De~~~~irtYqvCnv~~~~qnNWLrT~~I~r~~A~RiyiEl~FTvRDC~S~p~~~gsCKETFnLyy~EsD~d~~  131 (996)
T KOG0196|consen   52 EEVSGTDENGTPIRTYQVCNVMEPNQNNWLRTNFIERRGAQRIYIELKFTVRDCNSLPGVAGSCKETFNLYYYESDADTG  131 (996)
T ss_pred             hhhhhhcccCCceEEEEecccccCCCCcccccCcEecCCceEEEEEEEEeehhhhcCCCCCccccceeeeEEEeeccccC
Confidence            57899999645 99999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 EPPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 ~~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                      ..|+|++++|+||                  ||+|||+|+| ||||+||||||||+|||||||||||
T Consensus       132 ~~~~~~e~~~~kIDtIAadesf~~~d~~~r~mklNte~rs~Gpltk~GfYlAFqd~GAC~aLlsVrv  198 (996)
T KOG0196|consen  132 TKPIWRENPFVKIDTIAADESFTQSDLGDRVMKLNTEVRSVGPLTKKGFYLAFQDQGACLALLSVRV  198 (996)
T ss_pred             CCcccccccceeeeeeeccCceecccCccceeEeeeeeEeccccccceEEEEEecCCceEEEEEEEe
Confidence            8889999999999                  8999999999 9999999999999999999999997

>smart00615 EPH_lbd Ephrin receptor ligand binding domain

Probab=100.00  E-value=9.3e-44  Score=276.05  Aligned_cols=125  Identities=50%  Similarity=0.945  Sum_probs=108.4

Q ss_pred             eecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC--
Q psy17097          6 FTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR--   82 (130)
Q Consensus         6 ~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~--   82 (130)
                      ++++|+... +|+|++|++++++|+|||||+||+|++|+||||||+|++|+|+++|+..++|||||+|||+|+|.+.+  
T Consensus        27 ~~~~~~~~~~~~~~~~c~~~~~~~~nwl~t~~i~~r~a~ri~~elrf~~r~c~~~~~c~eTcketf~~~~~~~~~~~~~~  106 (177)
T smart00615       27 VSGMDENGTPIRTYQVCNVQEGNQNNWLRTNFIRRRGAQRIYVELKFTVRDCSSLPGVGGSCKETFNLYYYESDTDTATN  106 (177)
T ss_pred             ccCcCCCcceEEEEeeCCCCCccccCccCcccccccceEEEEEEEEEEEecCCCCCCCcccccceeehheeccccccccc
Confidence            445555544 99999999998999999999999999999999999999999999999889999999999999987654  


Q ss_pred             CCCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 EPPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 ~~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                      ..|+|.+.+|+|+                  +++|++++.+ |++++||||||||+|||||||+|||
T Consensus       107 ~~~~~~~k~~tka~t~a~~~~~~~~~~~~~n~~vn~~~~~~~~~~~~gFy~a~~~~g~c~~~v~~kv  173 (177)
T smart00615      107 TLPNWMENPYTKVDTIAADESFTGGDVGKRNVKLNTEVRSLGPLSKKGFYLAFQDQGACVALVSVRV  173 (177)
T ss_pred             cCcccccCCCeEeeeeeccccccccccccceeEEeeeecccCCccHHHHHHHhhhheeeEEEEEEEE
Confidence            3577888999998                  3455556666 6788999999999999999999986

>smart00615 EPH_lbd Ephrin receptor ligand binding domain

Probab=100.00  E-value=2.2e-34  Score=223.57  Aligned_cols=127  Identities=6%  Similarity=-0.193  Sum_probs=117.0

Q ss_pred             cceecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR   82 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~   82 (130)
                      +|+++.+++.+ +|+||+|++..+.|+|||++.||.+.+++|+++||+|+||+|.++++..++|||||++||++++.+.+
T Consensus        21 ~~~w~~~~~~~~~~~~~~~~~~c~~~~~~~~nwl~t~~i~~r~a~ri~~elrf~~r~c~~~~~c~eTcketf~~~~~~~~  100 (177)
T smart00615       21 PEGWEEVSGMDENGTPIRTYQVCNVQEGNQNNWLRTNFIRRRGAQRIYVELKFTVRDCSSLPGVGGSCKETFNLYYYESD  100 (177)
T ss_pred             ccCcccccCcCCCcceEEEEeeCCCCCccccCccCcccccccceEEEEEEEEEEEecCCCCCCCcccccceeehheeccc
Confidence            56777787755 99999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             CCC--CCCCCCceeE-EEe-----------------eEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 EPP--PWEPESYKLI-VNI-----------------NTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 ~~~--~~~~~~y~KV-~~~-----------------N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                      ..+  +|+++.|.|+ .++                 |+|++++ |++++|||+||||+||||||+++||
T Consensus       101 ~~~~~~~~~~~~~k~~tka~t~a~~~~~~~~~~~~~n~~vn~~~~~~~~~~~~gFy~a~~~~g~c~~~v  169 (177)
T smart00615      101 TDTATNTLPNWMENPYTKVDTIAADESFTGGDVGKRNVKLNTEVRSLGPLSKKGFYLAFQDQGACVALV  169 (177)
T ss_pred             cccccccCcccccCCCeEeeeeeccccccccccccceeEEeeeecccCCccHHHHHHHhhhheeeEEEE
Confidence            655  4999999999 677                 5789999 9999999999999999999999996

>PF07675 Cleaved_Adhesin: Cleaved Adhesin Domain; InterPro: IPR011628 This conserved region is found in a group of haemagglutinins and peptidases, e

Probab=94.79  E-value=0.038  Score=42.17  Aligned_cols=42  Identities=26%  Similarity=0.484  Sum_probs=24.2

Q ss_pred             CCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecC
Q psy17097         27 NVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDA   79 (130)
Q Consensus        27 ~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~   79 (130)
                      .+||||.||=|  .|++    .|+|.++.-.     .....|+|.++|.-++.
T Consensus        60 ~~DnWLISP~l--~g~~----~i~f~v~~~~-----~~~~~E~y~V~~Sttg~  101 (167)
T PF07675_consen   60 TADNWLISPQL--SGAQ----TISFWVKSQD-----ASYGPEHYEVLYSTTGN  101 (167)
T ss_dssp             --EEEEE-S----TT-E----EEEEEEEECT-----TTC---EEEEEEESS-S
T ss_pred             CCCceEEecCc--CCCC----EEEEEEEecc-----CCCCCceEEEEEecCCC
Confidence            57999999999  7765    5788887633     23468999999997654

g. IPR001769 from INTERPRO, that, in Porphyromonas gingivalis (Bacteroides gingivalis), form components of the major extracellular virulence complex RgpA-Kgp - a mixture of proteinases and adhesins []. These domains are cleaved from the original polyprotein and form part of the adhesins [].; PDB: 3KM5_B 3M1H_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	130
2qbx_A	208	Ephb2SNEW ANTAGONISTIC PEPTIDE COMPLEX Length = 208		1e-25
1kgy_A	181	Crystal Structure Of The Ephb2-Ephrinb2 Complex Len		5e-25
1nuk_A	183	Crystal Structure Of The Ligand-Binding Domain Of T		5e-25
1shw_B	181	Ephb2 EPHRINA5 COMPLEX STRUCTURE Length = 181		5e-25
3etp_A	187	The Crystal Structure Of The Ligand-Binding Domain		1e-24
3nru_A	187	Ligand Binding Domain Of Epha7 Length = 187		4e-24
3gxu_A	175	Crystal Structure Of Eph Receptor And Ephrin Comple		1e-23
2wo1_A	185	Crystal Structure Of The Epha4 Ligand Binding Domai		1e-23
3ckh_A	181	Crystal Structure Of Eph A4 Receptor Length = 181		1e-23
3p1i_A	200	Ligand Binding Domain Of Human Ephrin Type-B Recept		2e-23
2x11_A	545	Crystal Structure Of The Complete Epha2 Ectodomain		6e-22
3fl7_A	536	Crystal Structure Of The Human Ephrin A2 Ectodomain		8e-22
3mx0_A	409	Crystal Structure Of Epha2 Ectodomain In Complex Wi		1e-21
3hei_A	174	Ligand Recognition By A-Class Eph Receptors: Crysta		1e-21
3c8x_A	206	Crystal Structure Of The Ligand Binding Domain Of H		1e-21
3czu_A	207	Crystal Structure Of The Human Ephrin A2- Ephrin A1		1e-21
2x10_A	545	Crystal Structure Of The Complete Epha2 Ectodomain		3e-21
3mbw_A	330	Crystal Structure Of The Human Ephrin A2 Lbd And Cr		3e-21
2bba_A	185	Crystal Structure And Thermodynamic Characterizatio		1e-16
2hle_A	188	Structural And Biophysical Characterization Of The		1e-16

>pdb|2QBX|A Chain A, Ephb2SNEW ANTAGONISTIC PEPTIDE COMPLEX Length = 208

Iteration: 1
 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 22/149 (14%)
Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P  
Sbjct: 56  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSV 115
Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------EPESYKL------IVNINTEV 102
             SCKETF+L YYE  FD+AT+  P W              ES+        ++ INTEV
Sbjct: 116 PGSCKETFNLYYYEADFDSATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEV 175
Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 176 RSFGPVSRSGFYLAFQDYGGCMSLIAVRV 204

>pdb|1KGY|A Chain A, Crystal Structure Of The Ephb2-Ephrinb2 Complex Length = 181

Iteration: 1
 Score =  109 bits (272), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 22/149 (14%)
Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P  
Sbjct: 26  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSV 85
Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------EPESYKL------IVNINTEV 102
             SCKETF+L YYE  FD AT+  P W              ES+        ++ INTEV
Sbjct: 86  PGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEV 145
Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 146 RSFGPVSRNGFYLAFQDYGGCMSLIAVRV 174

>pdb|1NUK|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The Ephb2 Receptor Tyrosine Kinase Length = 183

Iteration: 1
 Score =  109 bits (272), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 22/149 (14%)
Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P  
Sbjct: 25  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSV 84
Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------EPESYKL------IVNINTEV 102
             SCKETF+L YYE  FD AT+  P W              ES+        ++ INTEV
Sbjct: 85  PGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEV 144
Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 145 RSFGPVSRNGFYLAFQDYGGCMSLIAVRV 173

>pdb|1SHW|B Chain B, Ephb2 EPHRINA5 COMPLEX STRUCTURE Length = 181

Iteration: 1
 Score =  109 bits (272), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 22/149 (14%)
Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P  
Sbjct: 26  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSV 85
Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------EPESYKL------IVNINTEV 102
             SCKETF+L YYE  FD AT+  P W              ES+        ++ INTEV
Sbjct: 86  PGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEV 145
Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 146 RSFGPVSRNGFYLAFQDYGGCMSLIAVRV 174

>pdb|3ETP|A Chain A, The Crystal Structure Of The Ligand-Binding Domain Of The Ephb2 Receptor At 2.0 A Resolution Length = 187

Iteration: 1
 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 89/149 (59%), Gaps = 22/149 (14%)
Query: 4   ESFTNFEKGINW-RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P  
Sbjct: 32  EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSV 91
Query: 63  ALSCKETFSLLYYE--FDAATREPPPW------------------EPESYKLIVNINTEV 102
             SCKETF+L YYE  FD AT+  P W                  + +    ++ INTEV
Sbjct: 92  PGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESISQVDLGGRVMKINTEV 151
Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           +S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 152 RSFGPVSRNGFYLAFQDYGGCMSLIAVRV 180

>pdb|3NRU|A Chain A, Ligand Binding Domain Of Epha7 Length = 187

Iteration: 1
 Score =  106 bits (264), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 82/132 (62%), Gaps = 17/132 (12%)
Query: 16  RSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYY 75
           R+Y VC V   N NNWL T +I +GNA RI++E+KFT+RDC   PG   +CKETF+L YY
Sbjct: 40  RTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYY 99
Query: 76  EFDAAT----RE------PPPWEPESY------KLIVNINTEVKSI-PVTKKGVYFAFRD 118
           E D  T    RE            ES+      +  + +NTEV+ I P++KKG Y AF+D
Sbjct: 100 ETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQD 159
Query: 119 QGACISLLAIKV 130
            GACI+L+++KV
Sbjct: 160 VGACIALVSVKV 171

>pdb|3GXU|A Chain A, Crystal Structure Of Eph Receptor And Ephrin Complex Length = 175

Iteration: 1
 Score =  104 bits (260), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 18/147 (12%)
Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + EK    R+Y VC+V   + NNWL T +I R  A R+YIEIKFT+RDC   P
Sbjct: 26  WEEVSIMD-EKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLP 84
Query: 61  GNALSCKETFSLLYYE----------------FDAATREPPPWEPESYKLIVNINTEVKS 104
           G   +CKETF+L YYE                 D    +    + +    I+ +NTE++ 
Sbjct: 85  GVMGTCKETFNLYYYESDNDKERFIRENQFVKIDTIAADESFTQVDIGDRIMKLNTEIRD 144
Query: 105 I-PVTKKGVYFAFRDQGACISLLAIKV 130
           + P++KKG Y AF+D GACI+L++++V
Sbjct: 145 VGPLSKKGFYLAFQDVGACIALVSVRV 171

>pdb|2WO1|A Chain A, Crystal Structure Of The Epha4 Ligand Binding Domain Length = 185

Iteration: 1
 Score =  104 bits (260), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 18/147 (12%)
Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + EK    R+Y VC+V   + NNWL T +I R  A R+YIEIKFT+RDC   P
Sbjct: 28  WEEVSIMD-EKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLP 86
Query: 61  GNALSCKETFSLLYYE----------------FDAATREPPPWEPESYKLIVNINTEVKS 104
           G   +CKETF+L YYE                 D    +    + +    I+ +NTE++ 
Sbjct: 87  GVMGTCKETFNLYYYESDNDKERFIRENQFVKIDTIAADESFTQVDIGDRIMKLNTEIRD 146
Query: 105 I-PVTKKGVYFAFRDQGACISLLAIKV 130
           + P++KKG Y AF+D GACI+L++++V
Sbjct: 147 VGPLSKKGFYLAFQDVGACIALVSVRV 173

>pdb|3CKH|A Chain A, Crystal Structure Of Eph A4 Receptor Length = 181

Iteration: 1
 Score =  104 bits (260), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 18/147 (12%)
Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + EK    R+Y VC+V   + NNWL T +I R  A R+YIEIKFT+RDC   P
Sbjct: 26  WEEVSIMD-EKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLP 84
Query: 61  GNALSCKETFSLLYYE----------------FDAATREPPPWEPESYKLIVNINTEVKS 104
           G   +CKETF+L YYE                 D    +    + +    I+ +NTE++ 
Sbjct: 85  GVMGTCKETFNLYYYESDNDKERFIRENQFVKIDTIAADESFTQVDIGDRIMKLNTEIRD 144
Query: 105 I-PVTKKGVYFAFRDQGACISLLAIKV 130
           + P++KKG Y AF+D GACI+L++++V
Sbjct: 145 VGPLSKKGFYLAFQDVGACIALVSVRV 171

>pdb|3P1I|A Chain A, Ligand Binding Domain Of Human Ephrin Type-B Receptor 3 Length = 200

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 18/145 (12%)
Query: 4   ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGN 62
           E  + +++ +N  R+Y VC+V   + NNWL T FI R +  R+Y+E+KFT+RDC   P  
Sbjct: 52  EEVSGYDEAMNPIRTYQVCNVRESSQNNWLRTGFIWRRDVQRVYVELKFTVRDCNSIPNI 111
Query: 63  ALSCKETFSLLYYEFDA--ATREPPPWEPESYKLIVNI--------------NTEVKSI- 105
             SCKETF+L YYE D+  A+   P W    Y  +  I              NT+V+S  
Sbjct: 112 PGSCKETFNLFYYEADSDVASASSPFWMENPYVKVDTIAPDESFSRLDAGRVNTKVRSFG 171
Query: 106 PVTKKGVYFAFRDQGACISLLAIKV 130
           P++K G Y AF+DQGAC+SL++++ 
Sbjct: 172 PLSKAGFYLAFQDQGACMSLISVRA 196

>pdb|2X11|A Chain A, Crystal Structure Of The Complete Epha2 Ectodomain In Complex With Ephrin A5 Receptor Binding Domain Length = 545

Iteration: 1
 Score = 99.0 bits (245), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 17/130 (13%)
Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE- 76
           Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 69  YSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAES 128
Query: 77  ---------------FDAATREPPPWEPESYKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
                           D    +      +     V +N E +S+ P+T+KG Y AF+D G
Sbjct: 129 DLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIG 188
Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 189 ACVALLSVRV 198

>pdb|3FL7|A Chain A, Crystal Structure Of The Human Ephrin A2 Ectodomain Length = 536

Iteration: 1
 Score = 98.6 bits (244), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 17/130 (13%)
Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE- 76
           Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 72  YSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAES 131
Query: 77  ---------------FDAATREPPPWEPESYKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
                           D    +      +     V +N E +S+ P+T+KG Y AF+D G
Sbjct: 132 DLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIG 191
Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 192 ACVALLSVRV 201

>pdb|3MX0|A Chain A, Crystal Structure Of Epha2 Ectodomain In Complex With Ephrin-A5 Length = 409

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 17/130 (13%)
Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE- 76
           Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 41  YSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAES 100
Query: 77  ---------------FDAATREPPPWEPESYKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
                           D    +      +     V +N E +S+ P+T+KG Y AF+D G
Sbjct: 101 DLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIG 160
Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 161 ACVALLSVRV 170

>pdb|3HEI|A Chain A, Ligand Recognition By A-Class Eph Receptors: Crystal Structures Of The Epha2 Ligand-Binding Domain And The Epha2EPHRIN-A1 Complex Length = 174

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 17/130 (13%)
Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE- 76
           Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 40  YSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAES 99
Query: 77  ---------------FDAATREPPPWEPESYKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
                           D    +      +     V +N E +S+ P+T+KG Y AF+D G
Sbjct: 100 DLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIG 159
Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 160 ACVALLSVRV 169

>pdb|3C8X|A Chain A, Crystal Structure Of The Ligand Binding Domain Of Human Ephrin A2 (Epha2) Receptor Protein Kinase Length = 206

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 17/130 (13%)
Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE- 76
           Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 71  YSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAES 130
Query: 77  ---------------FDAATREPPPWEPESYKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
                           D    +      +     V +N E +S+ P+T+KG Y AF+D G
Sbjct: 131 DLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIG 190
Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 191 ACVALLSVRV 200

>pdb|3CZU|A Chain A, Crystal Structure Of The Human Ephrin A2- Ephrin A1 Complex Length = 207

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 17/130 (13%)
Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYE- 76
           Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 72  YSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAES 131
Query: 77  ---------------FDAATREPPPWEPESYKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
                           D    +      +     V +N E +S+ P+T+KG Y AF+D G
Sbjct: 132 DLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIG 191
Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 192 ACVALLSVRV 201

>pdb|2X10|A Chain A, Crystal Structure Of The Complete Epha2 Ectodomain Length = 545

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 76/130 (58%), Gaps = 17/130 (13%)
Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEF 77
           Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 69  YSVCNVXSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAES 128
Query: 78  DAA--------------TREPPPWEPES--YKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
           D                T  P      S      V +N E +S+ P+T+KG Y AF+D G
Sbjct: 129 DLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIG 188
Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 189 ACVALLSVRV 198

>pdb|3MBW|A Chain A, Crystal Structure Of The Human Ephrin A2 Lbd And Crd Domains In Complex With Ephrin A1 Length = 330

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 76/130 (58%), Gaps = 17/130 (13%)
Query: 18  YVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEF 77
           Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A SCKETF+L Y E 
Sbjct: 71  YSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAES 130
Query: 78  DAA--------------TREPPPWEPES--YKLIVNINTEVKSI-PVTKKGVYFAFRDQG 120
           D                T  P      S      V +N E +S+ P+T+KG Y AF+D G
Sbjct: 131 DLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIG 190
Query: 121 ACISLLAIKV 130
           AC++LL+++V
Sbjct: 191 ACVALLSVRV 200

>pdb|2BBA|A Chain A, Crystal Structure And Thermodynamic Characterization Of The Ephb4 Receptor In Complex With An Ephrin-B2 Antagonist Peptide Reveals The Determinants For Receptor Specificity Length = 185

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 22/137 (16%)
Query: 16  RSYVVCDVAYH-NVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLY 74
           R+Y VCDV       +WL T ++ R  A  +Y  ++FT+ +C   P    SCKETF++ Y
Sbjct: 45  RTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLRFTMLECLSLPRAGRSCKETFTVFY 104
Query: 75  YEFDA--ATREPPPWEPESYKLIVNINTE----------------VKSI---PVTKKGVY 113
           YE DA  AT   P W    Y  +  +  E                VK++   P++K G Y
Sbjct: 105 YESDADTATALTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVNVKTLRLGPLSKAGFY 164
Query: 114 FAFRDQGACISLLAIKV 130
            AF+DQGAC++LL++ +
Sbjct: 165 LAFQDQGACMALLSLHL 181

>pdb|2HLE|A Chain A, Structural And Biophysical Characterization Of The Ephb4-ephrinb2 Protein Protein Interaction And Receptor Specificity Length = 188

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 22/137 (16%)
Query: 16  RSYVVCDVAYH-NVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLY 74
           R+Y VCDV       +WL T ++ R  A  +Y  ++FT+ +C   P    SCKETF++ Y
Sbjct: 48  RTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLRFTMLECLSLPRAGRSCKETFTVFY 107
Query: 75  YEFDA--ATREPPPWEPESYKLIVNINTE----------------VKSI---PVTKKGVY 113
           YE DA  AT   P W    Y  +  +  E                VK++   P++K G Y
Sbjct: 108 YESDADTATALTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVNVKTLRLGPLSKAGFY 167
Query: 114 FAFRDQGACISLLAIKV 130
            AF+DQGAC++LL++ +
Sbjct: 168 LAFQDQGACMALLSLHL 184

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	130
2qbx_A	208	Ephrin type-B receptor 2; receptor tyrosine kinase	5e-55
3p1i_A	200	Ephrin type-B receptor 3; ATP-binding, kinase, nuc	7e-54
3c8x_A	206	Ephrin type-A receptor 2; ATP-binding, kinase, nuc	1e-51
2bba_A	185	Ephrin type-B receptor 4; EPHB4, tumorigenesis, an	2e-51
3etp_A	187	Ephrin type-B receptor 2; EPH receptor, tyrosine k	4e-51
2wo1_A	185	Ephrin type-A receptor; glycoprotein, AXON guidanc	1e-50
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	1e-48

>2qbx_A Ephrin type-B receptor 2; receptor tyrosine kinase, BI-directional signaling, tumorigenesis, angiogenesis, signaling protein, structural genomics; 2.30A {Homo sapiens} Length = 208

 Score =  170 bits (431), Expect = 5e-55
 Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 22/151 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + E     R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P
Sbjct: 55  WEEVSGYD-ENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIP 113

Query: 61  GNALSCKETFSLLYYE--FDAATREPPPWEPESYKLI------------------VNINT 100
               SCKETF+L YYE  FD+AT+  P W    +  +                  + INT
Sbjct: 114 SVPGSCKETFNLYYYEADFDSATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINT 173

Query: 101 EVKSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           EV+S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 174 EVRSFGPVSRSGFYLAFQDYGGCMSLIAVRV 204

>3p1i_A Ephrin type-B receptor 3; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; 2.10A {Homo sapiens} Length = 200

 Score =  166 bits (422), Expect = 7e-54
 Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 18/147 (12%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + E     R+Y VC+V   + NNWL T FI R +  R+Y+E+KFT+RDC   P
Sbjct: 51  WEEVSGYD-EAMNPIRTYQVCNVRESSQNNWLRTGFIWRRDVQRVYVELKFTVRDCNSIP 109

Query: 61  GNALSCKETFSLLYYEFDA--ATREPPPWEPESYKLIVNI--------------NTEVKS 104
               SCKETF+L YYE D+  A+   P W    Y  +  I              NT+V+S
Sbjct: 110 NIPGSCKETFNLFYYEADSDVASASSPFWMENPYVKVDTIAPDESFSRLDAGRVNTKVRS 169

Query: 105 I-PVTKKGVYFAFRDQGACISLLAIKV 130
             P++K G Y AF+DQGAC+SL++++ 
Sbjct: 170 FGPLSKAGFYLAFQDQGACMSLISVRA 196

>3c8x_A Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; 1.95A {Homo sapiens} PDB: 3skj_E 3czu_A* 3hei_A 3hpn_A Length = 206

 Score =  161 bits (409), Expect = 1e-51
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 21/146 (14%)

Query: 4   ESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNA 63
           +   N    +    Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A
Sbjct: 57  DLMQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGA 116

Query: 64  LSCKETFSLLYYEFDAATREPPPWEPESYKLI------------------VNINTEVKSI 105
            SCKETF+L Y E D        ++   +  I                  V +N E +S+
Sbjct: 117 SSCKETFNLYYAESD--LDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSV 174

Query: 106 -PVTKKGVYFAFRDQGACISLLAIKV 130
            P+T+KG Y AF+D GAC++LL+++V
Sbjct: 175 GPLTRKGFYLAFQDIGACVALLSVRV 200

>2bba_A Ephrin type-B receptor 4; EPHB4, tumorigenesis, angiogenesis, peptide mimetics, signal protein, structural genomics, PSI-2; 1.65A {Homo sapiens} SCOP: b.18.1.4 PDB: 2hle_A Length = 185

 Score =  160 bits (405), Expect = 2e-51
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 22/152 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAY-HNVNNWLWTPFIERGNANRIYIEIKFTIRDCALF 59
             EE     E+  + R+Y VCDV       +WL T ++ R  A  +Y  ++FT+ +C   
Sbjct: 30  QWEELSGLDEEQHSVRTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLRFTMLECLSL 89

Query: 60  PGNALSCKETFSLLYYEFDA--ATREPPPWEPESYKLI------------------VNIN 99
           P    SCKETF++ YYE DA  AT   P W    Y  +                    +N
Sbjct: 90  PRAGRSCKETFTVFYYESDADTATALTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVN 149

Query: 100 TEVKSI-PVTKKGVYFAFRDQGACISLLAIKV 130
            +   + P++K G Y AF+DQGAC++LL++ +
Sbjct: 150 VKTLRLGPLSKAGFYLAFQDQGACMALLSLHL 181

>3etp_A Ephrin type-B receptor 2; EPH receptor, tyrosine kinase, alternative splicing, ATP- binding, glycoprotein, kinase, membrane, nucleotide- binding; 2.00A {Mus musculus} PDB: 1nuk_A 1kgy_A 1shw_B* Length = 187

 Score =  159 bits (403), Expect = 4e-51
 Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 22/151 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + E     R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P
Sbjct: 31  WEEVSGYD-ENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIP 89

Query: 61  GNALSCKETFSLLYYE--FDAATREPPPWEPESYKLI------------------VNINT 100
               SCKETF+L YYE  FD AT+  P W    +  +                  + INT
Sbjct: 90  SVPGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESISQVDLGGRVMKINT 149

Query: 101 EVKSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           EV+S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 150 EVRSFGPVSRNGFYLAFQDYGGCMSLIAVRV 180

>2wo1_A Ephrin type-A receptor; glycoprotein, AXON guidance, vascular development, cell SURF receptor, transferase, cell signaling; 1.85A {Homo sapiens} PDB: 2wo2_A* 2wo3_A* 3ckh_A 3gxu_A 3nru_A Length = 185

 Score =  157 bits (399), Expect = 1e-50
 Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 22/149 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + EK    R+Y VC+V   + NNWL T +I R  A R+YIEIKFT+RDC   P
Sbjct: 28  WEEVSIMD-EKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLP 86

Query: 61  GNALSCKETFSLLYYEFDAATREPPPWEPESYKLI------------------VNINTEV 102
           G   +CKETF+L YYE D    +        +  I                  + +NTE+
Sbjct: 87  GVMGTCKETFNLYYYESD--NDKERFIRENQFVKIDTIAADESFTQVDIGDRIMKLNTEI 144

Query: 103 KSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           + + P++KKG Y AF+D GACI+L++++V
Sbjct: 145 RDVGPLSKKGFYLAFQDVGACIALVSVRV 173

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score =  162 bits (410), Expect = 1e-48
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 21/146 (14%)

Query: 4   ESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNA 63
           +   N    +    Y VC+V   + +NWL T ++ RG A RI+IE+KFT+RDC  FPG A
Sbjct: 58  DLMQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGA 117

Query: 64  LSCKETFSLLYYEFDAATREPPPWEPESYKLI------------------VNINTEVKSI 105
            SCKETF+L Y E D        ++   +  I                  V +N E +S+
Sbjct: 118 SSCKETFNLYYAESDLDYG--TNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSV 175

Query: 106 -PVTKKGVYFAFRDQGACISLLAIKV 130
            P+T+KG Y AF+D GAC++LL+++V
Sbjct: 176 GPLTRKGFYLAFQDIGACVALLSVRV 201

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	130
3etp_A	187	Ephrin type-B receptor 2; EPH receptor, tyrosine k	100.0
3p1i_A	200	Ephrin type-B receptor 3; ATP-binding, kinase, nuc	100.0
2bba_A	185	Ephrin type-B receptor 4; EPHB4, tumorigenesis, an	100.0
2wo1_A	185	Ephrin type-A receptor; glycoprotein, AXON guidanc	100.0
2qbx_A	208	Ephrin type-B receptor 2; receptor tyrosine kinase	100.0
3c8x_A	206	Ephrin type-A receptor 2; ATP-binding, kinase, nuc	100.0
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	100.0
3m1h_A	178	Lysine specific cysteine protease; beta jelly roll	96.76
3km5_A	180	Lysine specific cysteine protease; beta jelly roll	94.58

>3etp_A Ephrin type-B receptor 2; EPH receptor, tyrosine kinase, alternative splicing, ATP- binding, glycoprotein, kinase, membrane, nucleotide- binding; 2.00A {Mus musculus} SCOP: b.18.1.4 PDB: 1nuk_A 1kgy_A 1shw_B*

Probab=100.00  E-value=1e-69  Score=426.36  Aligned_cols=127  Identities=45%  Similarity=0.866  Sum_probs=121.1

Q ss_pred             cceecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR   82 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~   82 (130)
                      ||+|++|++.+ +||||||+|++++|||||||+||+|+||+||||||+||||||+|+|+++++|||||||||||+|.+.+
T Consensus        32 eEvs~~d~~~~~~rtYqvC~v~~~~qnNWLrT~~I~r~~A~Rv~VEl~FtvRdC~s~p~~~~sCKETFnLyy~esd~~~~  111 (187)
T 3etp_A           32 EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSVPGSCKETFNLYYYEADFDLA  111 (187)
T ss_dssp             EEEEEECTTSCEEEEEEECCTTSSSCCEEEECCCEECTTCSSEEEEEEEEECCGGGSTTCCTTCCCEEEEEEEEESSSCC
T ss_pred             ceeeeecCCCceeEEEeECCCCCCCCCcceecccEEcCCCcEEEEEEEEeeccccccCCCCCcccceeeEEEEecCcccC
Confidence            67999999866 99999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             C--CCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 E--PPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 ~--~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                      .  .|+|++++|+||                  +++|||+|+| ||||+||||||||+||||||+||||
T Consensus       112 ~~~~p~~~~~~y~KVdTIAAdesf~~~~~g~r~~klN~e~r~~gplsk~GfYLAFqd~GAC~aL~sVrV  180 (187)
T 3etp_A          112 TKTFPNWMENPWVKVDTIAADESISQVDLGGRVMKINTEVRSFGPVSRNGFYLAFQDYGGCMSLIAVRV  180 (187)
T ss_dssp             CSSSSCSSBTTBEEEEEEECCSCEEEEEETTEEEEEEEEEEEECCCCSSEEEEEEEESSCCEEEEEEEE
T ss_pred             CCcccccCcCCceEEEEEecCCccccccccccceeeeEEEEeccccccceEEEEEcCCCceEEEEEEEE
Confidence            4  579999999999                  5899999999 9999999999999999999999997

>3p1i_A Ephrin type-B receptor 3; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.3e-68  Score=423.30  Aligned_cols=127  Identities=44%  Similarity=0.882  Sum_probs=120.5

Q ss_pred             cceecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR   82 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~   82 (130)
                      ||+|++|++.+ +||||||+|++++|||||||+||+|+||+||||||+||||||+|+|+++++|||||||||||+|.+.+
T Consensus        52 eEvs~~d~~~~~iRtYqVCnv~~~~qnNWLRT~~I~R~~A~RvyVEl~FTvRDC~s~p~~~~sCKETFnLyY~EsD~d~~  131 (200)
T 3p1i_A           52 EEVSGYDEAMNPIRTYQVCNVRESSQNNWLRTGFIWRRDVQRVYVELKFTVRDCNSIPNIPGSCKETFNLFYYEADSDVA  131 (200)
T ss_dssp             EEEEEECTTCCEEEEEEECCTTSSSCCEEEECCCEECTTCSSEEEEEEEEEBCGGGSTTCCTTCBCCEEEEEEEESSCCC
T ss_pred             eEEEeEcCCCceeEEEeECCCCCCCCCceeecCcEECCCccEEEEEEEEeeccccccCCCCCcccceeEEEEEecccccc
Confidence            67999999866 99999999999999999999999999999999999999999999999999999999999999998654


Q ss_pred             --CCCCCCCCCceeE--------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 --EPPPWEPESYKLI--------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 --~~~~~~~~~y~KV--------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                        ..|+|++++|+||              .++|||+|+| ||||+||||||||+||||||+||||
T Consensus       132 ~~~~~~~~e~~y~KVdTIAADesf~~~d~~klNte~r~igplsk~GfYLAFqD~GAC~aLlsVrV  196 (200)
T 3p1i_A          132 SASSPFWMENPYVKVDTIAPDESFSRLDAGRVNTKVRSFGPLSKAGFYLAFQDQGACMSLISVRA  196 (200)
T ss_dssp             CTTSCSCCSSCCEEEEEECCSCCBC---CCCCEEEEEEECCCCSSEEEEEEEESSBCEEEEEEEE
T ss_pred             cccCCCcccCCCceeEEEecCCccccCCccceeEEEEeccccccceEEEEEccCCceEEEEEEEE
Confidence              3689999999999              2799999999 9999999999999999999999997

>2bba_A Ephrin type-B receptor 4; EPHB4, tumorigenesis, angiogenesis, peptide mimetics, signal protein, structural genomics, PSI-2; 1.65A {Homo sapiens} SCOP: b.18.1.4 PDB: 2hle_A

Probab=100.00  E-value=1.2e-67  Score=414.07  Aligned_cols=127  Identities=36%  Similarity=0.772  Sum_probs=120.6

Q ss_pred             cceecccCCcc-eEEEEecccCCC-CCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYH-NVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAAT   81 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~-~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~   81 (130)
                      ||+|++|++.+ +||||||+|+.+ +|||||||+||+|+||+||||||+||||||+|+|+++++|||||||||||+|.+.
T Consensus        32 eevs~~d~~~~~~rtYqVCnv~~~~~qnNWLrT~~I~r~~A~Ri~VEl~Ft~RdC~s~p~~~~sCKETFnLyy~esd~d~  111 (185)
T 2bba_A           32 EELSGLDEEQHSVRTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLRFTMLECLSLPRAGRSCKETFTVFYYESDADT  111 (185)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSSCTTCEEEEECCCEECTTCSSEEEEEEEEEBCGGGSTTCCTTCCSEEEEEEEEESSSC
T ss_pred             eeeeeecCCCCceeEEeECCCCCCCCCCCeeccCcEEcCCceEEEEEEEEEeeccccCCCCCCcCcCEeEEEEEEccccc
Confidence            67899998855 999999999999 9999999999999999999999999999999999999999999999999999877


Q ss_pred             CC--CCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         82 RE--PPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        82 ~~--~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                      +.  .|+|++++|+||                  +++|+|+|+| ||||+||||||||+||||||+||||
T Consensus       112 ~~~~~p~w~e~~y~KVdTIAAdesF~~~~~~~~~~~~Nte~r~igplsk~GfYLAFqD~GAC~aL~sVrV  181 (185)
T 2bba_A          112 ATALTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVNVKTLRLGPLSKAGFYLAFQDQGACMALLSLHL  181 (185)
T ss_dssp             CCSSCSCSSBTTBEEEEEEECSSCBBCCTTSCCBCCCEEEEEEECCCCSSEEEEEEEEESCEEEEEEEEE
T ss_pred             CccCCcccCcCCceEEEEEecCCCccccccCcceeEEEEEEEEecccCCCeEEEEEccCCcEEEEEEEEE
Confidence            65  378999999999                  4799999999 9999999999999999999999997

>2wo1_A Ephrin type-A receptor; glycoprotein, AXON guidance, vascular development, cell SURF receptor, transferase, cell signaling; 1.85A {Homo sapiens} PDB: 2wo2_A* 2wo3_A* 3ckh_A 3gxu_A 3nru_A

Probab=100.00  E-value=2.7e-67  Score=412.06  Aligned_cols=125  Identities=44%  Similarity=0.829  Sum_probs=118.2

Q ss_pred             cceecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR   82 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~   82 (130)
                      ||+|++|++.+ +||||||+|+.++|||||||+||+|++|+||||||+||||||+|+|+++++|||||||||||+|.+.+
T Consensus        29 eevs~~d~~~~~~rtYqVCnv~~~~qnNWLrT~~I~r~~A~Ri~VEl~FtvRdC~s~p~~~~sCKETFnLyy~esD~d~~  108 (185)
T 2wo1_A           29 EEVSIMDEKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLPGVMGTCKETFNLYYYESDNDKE  108 (185)
T ss_dssp             EEEEEEC-CCCEEEEEEEECTTCSSCCEEEECCCEECTTCSCEEEEEEEEECCGGGSTTCTTTCCSEEEEEEEEESCTTC
T ss_pred             ceeeccCCCCCceeEEeECCCCCCCCCcceecCcEEcCCceEEEEEEEEEEeccccCCCCCCcccCEeEEEEEEccCccc
Confidence            67999998855 99999999999999999999999999999999999999999999999999999999999999998554


Q ss_pred             CCCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 EPPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 ~~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                        ++|++++|+||                  +++|||+|+| ||||+||||||||+||||||+||||
T Consensus       109 --~~~~~~~y~KVdTIAAde~F~~~~~~~~~~~~Nte~r~igplsk~GfYLAFqD~GAC~aL~sVrV  173 (185)
T 2wo1_A          109 --RFIRENQFVKIDTIAADESFTQVDIGDRIMKLNTEIRDVGPLSKKGFYLAFQDVGACIALVSVRV  173 (185)
T ss_dssp             --CSCCGGGCEEEEEEECCSCEEEEC--CCCEEEEEEEEEECCCCSSEEEEEEEESSCEEEEEEEEE
T ss_pred             --cCcccCCceEEEEEecCCcccccccccceeeeeEEEEEccccCCccEEEEEccCCcEEEEEEEEE
Confidence              68999999998                  4799999999 9999999999999999999999997

>2qbx_A Ephrin type-B receptor 2; receptor tyrosine kinase, BI-directional signaling, tumorigenesis, angiogenesis, signaling protein, structural genomics; 2.30A {Homo sapiens}

Probab=100.00  E-value=1e-66  Score=414.72  Aligned_cols=127  Identities=45%  Similarity=0.871  Sum_probs=120.3

Q ss_pred             cceecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR   82 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~   82 (130)
                      ||+|++|++.+ +||||||+|++++|||||||+||+|++|+||||||+||||||+|+|+++++|||||||||||+|.+.+
T Consensus        56 eEvs~~de~~~~~RtYqVCnv~~~~qnNWLRT~~I~r~~A~RI~VEl~FTvRDC~s~p~~~~sCKETFnLyY~EsD~d~~  135 (208)
T 2qbx_A           56 EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSVPGSCKETFNLYYYEADFDSA  135 (208)
T ss_dssp             EEEEEECTTCCEEEEEEECCTTSSSCCEEEECCCEECTTCSSEEEEEEEEECCGGGSTTCCTTCBCCEEEEEEEESSCCC
T ss_pred             eEeeccCCCCCceeEEeeCCCCCCCCCCceecCcEEcCCceEEEEEEEEEeeccccCCCCCCcccCEeEEEEEEcccccC
Confidence            56899998755 99999999999999999999999999999999999999999999999999999999999999998766


Q ss_pred             C--CCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 E--PPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 ~--~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                      .  .|+|++++|+||                  +++|||+|+| ||||+||||||||+||||||+||||
T Consensus       136 ~~~~p~~~~~~y~KVDTIAAdesF~~~~~~~r~~~~Nte~r~igplsk~GfYLAFqD~GACmaL~sVrV  204 (208)
T 2qbx_A          136 TKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEVRSFGPVSRSGFYLAFQDYGGCMSLIAVRV  204 (208)
T ss_dssp             CSSCSCSSBTTBEEEEEECCCSCCEEEEETTEEEEEEEEEEEECCCCSSEEEEEEEESSBCEEEEEEEE
T ss_pred             cCCCcccccCCceEEEEEecCCccccccccccceeeeEEEEEccccCCCcEEEEEccCCcEEEEEEEEE
Confidence            4  478999999998                  4799999999 9999999999999999999999997

>3c8x_A Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; 1.95A {Homo sapiens} PDB: 3skj_E 3czu_A* 3hei_A 3hpn_A

Probab=100.00  E-value=5e-65  Score=404.61  Aligned_cols=125  Identities=44%  Similarity=0.834  Sum_probs=118.8

Q ss_pred             cceecccCCcceEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCCC
Q psy17097          4 ESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATRE   83 (130)
Q Consensus         4 ee~s~~d~~~~~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~~   83 (130)
                      ||+|++|+++++||||||+|+.++|||||||+||+|++|+||||||+||||||+|+|+++++|||||||||||+|.+.+ 
T Consensus        57 eE~s~~de~~~~rtYqVCnv~~~~qnNWLrT~~I~r~~A~RiyVEl~FTvRdC~s~p~~~~sCKETFnLyy~esd~d~~-  135 (206)
T 3c8x_A           57 DLMQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAESDLDYG-  135 (206)
T ss_dssp             EEEEECSSSSCEEEEEECCCSSSSCCEEEECCCEECTTCSSEEEEEEEEEECGGGSTTCCTTCBSCEEEEEEEESSCCT-
T ss_pred             ceeeccCCCCCeEeeeECCCCCCCCCcceecCcEEcCCceEEEEEEEEEEeccccCCCCCCcCcCEeEEEEEEcccCcc-
Confidence            4678899876899999999999999999999999999999999999999999999999999999999999999998655 


Q ss_pred             CCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         84 PPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        84 ~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                       ++|++++|+||                  +++|+|+|+| ||||+||||||||+||||||+||||
T Consensus       136 -~~~~e~~y~KVdTIAAde~F~~~d~~~~~~~lNte~r~igplsk~GfYLAFqD~GAC~aL~sVrV  200 (206)
T 3c8x_A          136 -TNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIGACVALLSVRV  200 (206)
T ss_dssp             -TCCCGGGSEEEEEECCC-----------CEEEEEEEEEECCCCSSEEEEEEEESSBCEEEEEEEE
T ss_pred             -cccccCCceEEEEEecCCcccccccccccceeeEEEEEccccCCCcEEEEEccCCcEEEEEEEEE
Confidence             57999999999                  5899999999 9999999999999999999999997

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=100.00  E-value=1.2e-64  Score=441.94  Aligned_cols=125  Identities=44%  Similarity=0.834  Sum_probs=113.6

Q ss_pred             cceecccCCcceEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCCC
Q psy17097          4 ESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATRE   83 (130)
Q Consensus         4 ee~s~~d~~~~~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~~   83 (130)
                      ||+|++||+.++||||||||++++|||||||+||+|++|+||||||+||||||+|||+++++|||||||||||+|.+.+ 
T Consensus        58 ~e~~~~~~~~~~r~y~vc~v~~~~q~nwl~t~~i~r~~a~ri~ve~~ft~rdc~s~~~~~~~cketf~l~y~e~d~~~~-  136 (536)
T 3fl7_A           58 DLMQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAESDLDYG-  136 (536)
T ss_dssp             EEEEECC---CEEEEEEECCSSSCCCEEEECCCEECTTCSSEEEEEEEEEBCTTTCC----CCCSCEEEEEEEESSCCT-
T ss_pred             eeeEeecCCCceEEEEECCCCCCCCCcceecCCEECCCceEEEEEEEEEeehhhcCCCCCCCCcCeeeEEEEeccCccc-
Confidence            6789999877899999999999999999999999999999999999999999999999999999999999999998654 


Q ss_pred             CCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         84 PPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        84 ~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                       ++|++++|+||                  ||+|||+|+| ||||+||||||||+||||||+||||
T Consensus       137 -~~~~~~~~~kidtiaade~~~~~~~~~~~~~~n~e~~~~~~~~~~g~ylafqd~gac~~l~svrv  201 (536)
T 3fl7_A          137 -TNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIGACVALLSVRV  201 (536)
T ss_dssp             -TCCCGGGCEEEEEECCSSCBCC------CCCCEEEEEEECCCCSSEEEEEEEESSCEEEEEEEEE
T ss_pred             -cccccCCCeEEEEEeCCCccccccccccceeeeEEEEeecccccceEEEEeccCCceEEEEEEEE
Confidence             48999999999                  6899999999 9999999999999999999999997

>3m1h_A Lysine specific cysteine protease; beta jelly roll barrel, cleaved adhesin family, Lys-gingipai hemagglutination domain; 1.56A {Porphyromonas gingivalis}

Probab=96.76  E-value=0.0062  Score=46.98  Aligned_cols=46  Identities=17%  Similarity=0.207  Sum_probs=37.7

Q ss_pred             CCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCC
Q psy17097         26 HNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAA   80 (130)
Q Consensus        26 ~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~   80 (130)
                      ...||||.||=|...|+++    |+|.++.-.     .....|+|.+||..++.+
T Consensus        62 ~~~DnWLISP~L~~~g~~~----l~F~~~~~~-----~~~~~E~~~V~~Sttg~~  107 (178)
T 3m1h_A           62 QNPDNYLVTPELSLPGGGT----LTFWVCAQD-----ANYASEHYAVYASSTGND  107 (178)
T ss_dssp             CCCEEEEECCCCCCTTCEE----EEEEEEESS-----TTSCCCEEEEEEESSCCS
T ss_pred             CCCCceEEcccccCCCCCE----EEEEEEcCC-----CCCCCceEEEEEEcCCCC
Confidence            3679999999999998984    899988762     234899999999998753

>3km5_A Lysine specific cysteine protease; beta jelly roll barrel, cleaved adhesin family, Lys-gingipai hemagglutination domain, cell invasion; 1.40A {Porphyromonas gingivalis}

Probab=94.58  E-value=0.11  Score=40.10  Aligned_cols=72  Identities=13%  Similarity=0.231  Sum_probs=44.2

Q ss_pred             CCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCCCCCCCCCCCceeEE-Eee------
Q psy17097         27 NVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATREPPPWEPESYKLIV-NIN------   99 (130)
Q Consensus        27 ~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~~~~~~~~~~y~KV~-~~N------   99 (130)
                      ..||||.||=|.  |+.++    +|..+....      ...|+|.+||..++.+        ...|++|. ...      
T Consensus        64 ~~DnWLISP~Ls--G~~q~----~~f~~~~~~------~~~E~f~V~~STtg~~--------~~~Ft~i~~~t~~~~~~~  123 (180)
T 3km5_A           64 NPDNYLISKDVT--GATKV----KYYYAVNDG------FPGDHYAVMISKTGTN--------AGDFTVVFEETPNGINKG  123 (180)
T ss_dssp             CCEEEEECCCCT--TCCEE----EEEEEECTT------SCCCCEEEEEESSCSS--------GGGEEEEEEECCCCCCCC
T ss_pred             CCCceEEccccC--CCCeE----EEEEEeCCC------CCCceEEEEEECCCCC--------cccceEeeeccccccccc
Confidence            579999999886  66552    222222211      1129999999998753        33566662 110      


Q ss_pred             ------------------EEEEEEeecCCeeEEEEec
Q psy17097        100 ------------------TEVKSIPVTKKGVYFAFRD  118 (130)
Q Consensus       100 ------------------~e~~~~~lsk~GfYLAFqD  118 (130)
                                        =..+.+.|+..-.|+||+=
T Consensus       124 ~~~~~~~~~~~~~~~~~~W~~~~v~Lp~gt~Y~A~~h  160 (180)
T 3km5_A          124 GARFGLSTEANGAKPQSVWIERTVDLPAGTKYVAFRH  160 (180)
T ss_dssp             CCCCCSSSCCSSCCCCCCCEEEEEECCTTCCEEEEEE
T ss_pred             ccccccccccccccCCCceEEEEEeCCCCCeEEEEEE
Confidence                              0114457888889999953

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	130
d2bbaa1	180	b.18.1.4 (A:17-196) Ephrin type-B receptor 4 {Huma	3e-60
d1shwb_	181	b.18.1.4 (B:) Ligand-binding domain of the ephb2 r	6e-60

>d2bbaa1 b.18.1.4 (A:17-196) Ephrin type-B receptor 4 {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: Ephrin receptor ligand binding domain
domain: Ephrin type-B receptor 4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (460), Expect = 3e-60
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 23/152 (15%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAY-HNVNNWLWTPFIERGNANRIYIEIKFTIRDCALF 59
           W E S  + E+  + R+Y VCDV       +WL T ++ R  A  +Y  ++FT+ +C   
Sbjct: 26  WEELSGLD-EEQHSVRTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLRFTMLECLSL 84

Query: 60  PGNALSCKETFSLLYYEFDA--ATREPPPWEPESYKLI------------------VNIN 99
           P    SCKETF++ YYE DA  AT   P W    Y  +                    +N
Sbjct: 85  PRAGRSCKETFTVFYYESDADTATALTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVN 144

Query: 100 TEVKSI-PVTKKGVYFAFRDQGACISLLAIKV 130
            +   + P++K G Y AF+DQGAC++LL++ +
Sbjct: 145 VKTLRLGPLSKAGFYLAFQDQGACMALLSLHL 176

>d1shwb_ b.18.1.4 (B:) Ligand-binding domain of the ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: Ephrin receptor ligand binding domain
domain: Ligand-binding domain of the ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  180 bits (458), Expect = 6e-60
 Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 22/151 (14%)

Query: 1   WVEESFTNFEKGINWRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFP 60
           W E S  + E     R+Y VC+V   + NNWL T FI R  A+RI++E+KF++RDC+  P
Sbjct: 25  WEEVSGYD-ENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIP 83

Query: 61  GNALSCKETFSLLYYE--FDAATREPPPWEPESYKLI------------------VNINT 100
               SCKETF+L YYE  FD AT+  P W    +  +                  + INT
Sbjct: 84  SVPGSCKETFNLYYYEADFDLATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINT 143

Query: 101 EVKSI-PVTKKGVYFAFRDQGACISLLAIKV 130
           EV+S  PV++ G Y AF+D G C+SL+A++V
Sbjct: 144 EVRSFGPVSRNGFYLAFQDYGGCMSLIAVRV 174

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	130
d1shwb_	181	Ligand-binding domain of the ephb2 receptor tyrosi	100.0
d2bbaa1	180	Ephrin type-B receptor 4 {Human (Homo sapiens) [Ta	100.0

>d1shwb_ b.18.1.4 (B:) Ligand-binding domain of the ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: Ephrin receptor ligand binding domain
domain: Ligand-binding domain of the ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-70  Score=426.25  Aligned_cols=127  Identities=45%  Similarity=0.866  Sum_probs=121.2

Q ss_pred             cceecccCCcc-eEEEEecccCCCCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAYHNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAATR   82 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~~   82 (130)
                      ||+|++|++.+ +||||||+|++++|||||||+||+|++|+||||||+||||||+|+|+++++|||||||||||+|.+.+
T Consensus        26 ~evs~~de~~~~irtYqVC~v~~~~qnNWLrT~~I~r~~A~RvyVEl~FtvRdC~s~p~~~~sCKETFnLyy~esd~d~~  105 (181)
T d1shwb_          26 EEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSVPGSCKETFNLYYYEADFDLA  105 (181)
T ss_dssp             EEEEEECTTSCEEEEEEEECTTSSSCCEEEECCCEECSSCSSEEEEEEEEEECGGGSSSCCSCCBSEEEEEEEEESSCCC
T ss_pred             eEeeeeccCCCeeEEEEECCCCCCCCCceeecCCEecCCceEEEEEEEEEEeccccCCCCCCcCcCeeEEEEEeeccccc
Confidence            68999999866 99999999999999999999999999999999999999999999999999999999999999998755


Q ss_pred             C--CCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         83 E--PPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        83 ~--~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                      .  .|+|++++|+||                  +++|||+|+| ||||+||||||||+||||||+||||
T Consensus       106 ~~~~p~w~~~~y~KvdTIAAdesf~~~d~~~~~~~~Nte~r~~gplsk~GfYLAFqD~GAC~aL~sVrV  174 (181)
T d1shwb_         106 TKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEVRSFGPVSRNGFYLAFQDYGGCMSLIAVRV  174 (181)
T ss_dssp             CSSSSCSSTTTSEEEEEEECSCEECSCCSSCCCSCCEEEEEEECCCCSSEEEEEEEESSBEEEEEEEEE
T ss_pred             cccCCccccCCceEEEEEecCCCcCccccCCceEeeeeEEeeccccCcceEEEEEccCCceEEEEEEEE
Confidence            4  689999999999                  5799999999 9999999999999999999999997

>d2bbaa1 b.18.1.4 (A:17-196) Ephrin type-B receptor 4 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: Ephrin receptor ligand binding domain
domain: Ephrin type-B receptor 4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-70  Score=423.13  Aligned_cols=127  Identities=36%  Similarity=0.771  Sum_probs=120.4

Q ss_pred             cceecccCCcc-eEEEEecccCC-CCCCceeeecceecCCcceEEEEEEEEEeccCCCCCCCCCccceeeeeEEEecCCC
Q psy17097          4 ESFTNFEKGIN-WRSYVVCDVAY-HNVNNWLWTPFIERGNANRIYIEIKFTIRDCALFPGNALSCKETFSLLYYEFDAAT   81 (130)
Q Consensus         4 ee~s~~d~~~~-~rtyqvC~v~~-~~q~NWLrT~~I~r~ga~rv~Vel~Ft~rdC~s~~~~~~~CKETFnLyy~esd~~~   81 (130)
                      ||+|++|++.+ +||||||||++ ++|||||||+||+|++|+||||||+||||||+|+|+++++|||||||||||+|.+.
T Consensus        27 ~evs~~de~~~~irtYqVC~v~~~~~qnNWLrT~~I~r~~A~RiyVEl~FtvRdC~s~p~~~~sCKETFnLyy~esd~d~  106 (180)
T d2bbaa1          27 EELSGLDEEQHSVRTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLRFTMLECLSLPRAGRSCKETFTVFYYESDADT  106 (180)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSSCTTCEEEEECCCEECTTCSSEEEEEEEEEBCGGGSTTCCTTCCSEEEEEEEEESSSC
T ss_pred             eEeeeecCCCCeeEEEEECCccCCCCCCceeecCCEecCCceEEEEEEEEEEecccCCCCCCCcCcCeeeEEEEEecccc
Confidence            57999998866 99999999986 69999999999999999999999999999999999999999999999999999866


Q ss_pred             CC--CCCCCCCCceeE------------------EEeeEEEEEE-eecCCeeEEEEecCCceEEEEEEeC
Q psy17097         82 RE--PPPWEPESYKLI------------------VNINTEVKSI-PVTKKGVYFAFRDQGACISLLAIKV  130 (130)
Q Consensus        82 ~~--~~~~~~~~y~KV------------------~~~N~e~~~~-~lsk~GfYLAFqD~GAC~aL~sVrV  130 (130)
                      ++  .|+|++++|+||                  +++|||+++| ||||+||||||||+||||||+||||
T Consensus       107 ~~~~~p~~~e~~y~KvdTIAAde~~~~~~~~~~~~~~Nte~~~igplsk~GfYLAFqD~GAC~aL~sVrV  176 (180)
T d2bbaa1         107 ATALTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVNVKTLRLGPLSKAGFYLAFQDQGACMALLSLHL  176 (180)
T ss_dssp             CCSSCSCSSBTTBEEEEEEECSSCBBCCTTSCCBCCCEEEEEEECCCCSSEEEEEEEEESCEEEEEEEEE
T ss_pred             cccCCCccccCCceEEEEEccCcccccCCCccceeecccEEEEecccCCCeEEEEEccCCceEEEEEEEE
Confidence            54  689999999999                  5799999999 9999999999999999999999997